Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:59:41 (2175286): wrapper (7.7.26015): starting
21:59:41 (2175286): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 21:59:41] Arguments: --nthreads 4
[2025-06-06 21:59:41] Threads: 4
[2025-06-06 21:59:41] Checking for CVMFS
[2025-06-06 21:59:41] No cvmfs_config command found, will try listing directly
[2025-06-06 21:59:41] CVMFS is ok
[2025-06-06 21:59:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 21:59:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 21:59:41] Further information can be found at the LHC@home message board.
[2025-06-06 21:59:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 21:59:41] Checking for apptainer binary...
[2025-06-06 21:59:41] which: no apptainer in ((null))
[2025-06-06 21:59:41] apptainer is not installed, using version from CVMFS
[2025-06-06 21:59:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 21:59:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-06 21:59:42] apptainer works
[2025-06-06 21:59:42] Set ATHENA_PROC_NUMBER=4
[2025-06-06 21:59:42] Set ATHENA_CORE_NUMBER=4
[2025-06-06 21:59:42] Starting ATLAS job with PandaID=6677419280
[2025-06-06 21:59:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 23:23:09]  *** The last 200 lines of the pilot log: ***
[2025-06-06 23:23:09]  lfn=log.45006595._014074.job.log.tgz.1
[2025-06-06 23:23:09]  mtime=0
[2025-06-06 23:23:09]  protocol_id=None
[2025-06-06 23:23:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 23:23:09]  replicas=None
[2025-06-06 23:23:09]  scope=mc23_13p6TeV
[2025-06-06 23:23:09]  status=None
[2025-06-06 23:23:09]  status_code=0
[2025-06-06 23:23:09]  storage_token=
[2025-06-06 23:23:09]  surl=/scratch/boinc/var/slot24/slots/0/PanDA_Pilot-6677419280/log.45006595._014074.job.log.tgz.1
[2025-06-06 23:23:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/fa/log.45006595._014074.job.log.tgz.1
[2025-06-06 23:23:09]  workdir=None
[2025-06-06 23:23:09] ]
[2025-06-06 23:23:09] 2025-06-06 21:22:42,854 | INFO     | transferring file log.45006595._014074.job.log.tgz.1 from /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-6677419280/log.45006595._014074.job.log.tgz.1 to /scratch/b
[2025-06-06 23:23:09] 2025-06-06 21:22:42,855 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-6677419280/log.45006595._014074.job.log.tgz.1 /scratch/boinc/var/slot24/slots/0/lo
[2025-06-06 23:23:09] 2025-06-06 21:22:42,867 | INFO     | adding to output.list: log.45006595._014074.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/fa/log.45006595._014074.job.log.tg
[2025-06-06 23:23:09] 2025-06-06 21:22:42,868 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 23:23:09] 2025-06-06 21:22:42,868 | INFO     | summary of transferred files:
[2025-06-06 23:23:09] 2025-06-06 21:22:42,868 | INFO     |  -- lfn=log.45006595._014074.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 23:23:09] 2025-06-06 21:22:42,868 | INFO     | stage-out finished correctly
[2025-06-06 23:23:09] 2025-06-06 21:22:44,330 | INFO     | monitor loop #380: job 0:6677419280 is in state 'finished'
[2025-06-06 23:23:09] 2025-06-06 21:22:44,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 23:23:09] 2025-06-06 21:22:45,067 | INFO     | PID=2178978 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 23:23:09] 2025-06-06 21:22:45,067 | INFO     | .. there are 3 such processes running
[2025-06-06 23:23:09] 2025-06-06 21:22:46,101 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 23:23:09] 2025-06-06 21:22:46,142 | INFO     | job 6677419280 has state=finished
[2025-06-06 23:23:09] 2025-06-06 21:22:46,143 | INFO     | preparing for final server update for job 6677419280 in state='finished'
[2025-06-06 23:23:09] 2025-06-06 21:22:46,143 | INFO     | this job has now completed (state=finished)
[2025-06-06 23:23:09] 2025-06-06 21:22:46,143 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 23:23:09] 2025-06-06 21:22:46,143 | INFO     | log transfer has been attempted: DONE
[2025-06-06 23:23:09] 2025-06-06 21:22:46,143 | INFO     | job 6677419280 has finished - writing final server update
[2025-06-06 23:23:09] 2025-06-06 21:22:46,143 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1461105/.job.ad'
[2025-06-06 23:23:09] 2025-06-06 21:22:46,143 | INFO     | total number of processed events: 400 (read)
[2025-06-06 23:23:09] 2025-06-06 21:22:46,146 | INFO     | executing command: lscpu
[2025-06-06 23:23:09] 2025-06-06 21:22:46,183 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 23:23:09] 2025-06-06 21:22:46,833 | INFO     | monitor loop #381: job 0:6677419280 is in state 'finished'
[2025-06-06 23:23:09] 2025-06-06 21:22:46,833 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 23:23:09] 2025-06-06 21:22:49,336 | INFO     | monitor loop #382: job 0:6677419280 is in state 'finished'
[2025-06-06 23:23:09] 2025-06-06 21:22:49,337 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 23:23:09] 2025-06-06 21:22:50,265 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 23:23:09] 2025-06-06 21:22:50,266 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-6677419280/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 23:23:09] 2025-06-06 21:22:50,266 | INFO     | extracted standard info from prmon json
[2025-06-06 23:23:09] 2025-06-06 21:22:50,266 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 23:23:09] 2025-06-06 21:22:50,266 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 23:23:09] 2025-06-06 21:22:50,267 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 23:23:09] 2025-06-06 21:22:50,267 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 23:23:09] 2025-06-06 21:22:50,268 | INFO     | fitting pss+swap vs Time
[2025-06-06 23:23:09] 2025-06-06 21:22:50,268 | INFO     | sum of square deviations: 130793150.0
[2025-06-06 23:23:09] 2025-06-06 21:22:50,268 | INFO     | sum of deviations: -2045596814.0
[2025-06-06 23:23:09] 2025-06-06 21:22:50,268 | INFO     | mean x: 1749242571.0
[2025-06-06 23:23:09] 2025-06-06 21:22:50,268 | INFO     | mean y: 2352172.3066666666
[2025-06-06 23:23:09] 2025-06-06 21:22:50,268 | INFO     | -- intersect: 27360398294.376278
[2025-06-06 23:23:09] 2025-06-06 21:22:50,268 | INFO     | intersect: 27360398294.376278
[2025-06-06 23:23:09] 2025-06-06 21:22:50,269 | INFO     | chi2: 0.01618406120530351
[2025-06-06 23:23:09] 2025-06-06 21:22:50,269 | INFO     | -- intersect: 27360398294.376278
[2025-06-06 23:23:09] 2025-06-06 21:22:50,269 | INFO     | current memory leak: -15.64 B/s (using 75 data points, chi2=0.02)
[2025-06-06 23:23:09] 2025-06-06 21:22:50,269 | INFO     | ..............................
[2025-06-06 23:23:09] 2025-06-06 21:22:50,269 | INFO     | . Timing measurements:
[2025-06-06 23:23:09] 2025-06-06 21:22:50,269 | INFO     | . get job = 0 s
[2025-06-06 23:23:09] 2025-06-06 21:22:50,269 | INFO     | . initial setup = 1 s
[2025-06-06 23:23:09] 2025-06-06 21:22:50,269 | INFO     | . payload setup = 4 s
[2025-06-06 23:23:09] 2025-06-06 21:22:50,269 | INFO     | . stage-in = 0 s
[2025-06-06 23:23:09] 2025-06-06 21:22:50,269 | INFO     | . payload execution = 4952 s
[2025-06-06 23:23:09] 2025-06-06 21:22:50,269 | INFO     | . stage-out = 0 s
[2025-06-06 23:23:09] 2025-06-06 21:22:50,269 | INFO     | . log creation = 0 s
[2025-06-06 23:23:09] 2025-06-06 21:22:50,269 | INFO     | ..............................
[2025-06-06 23:23:09] 2025-06-06 21:22:50,314 | INFO     | 
[2025-06-06 23:23:09] 2025-06-06 21:22:50,314 | INFO     | job summary report
[2025-06-06 23:23:09] 2025-06-06 21:22:50,314 | INFO     | --------------------------------------------------
[2025-06-06 23:23:09] 2025-06-06 21:22:50,314 | INFO     | PanDA job id: 6677419280
[2025-06-06 23:23:09] 2025-06-06 21:22:50,314 | INFO     | task id: 45006595
[2025-06-06 23:23:09] 2025-06-06 21:22:50,314 | INFO     | errors: (none)
[2025-06-06 23:23:09] 2025-06-06 21:22:50,314 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 23:23:09] 2025-06-06 21:22:50,314 | INFO     | pilot state: finished 
[2025-06-06 23:23:09] 2025-06-06 21:22:50,314 | INFO     | transexitcode: 0
[2025-06-06 23:23:09] 2025-06-06 21:22:50,314 | INFO     | exeerrorcode: 0
[2025-06-06 23:23:09] 2025-06-06 21:22:50,314 | INFO     | exeerrordiag: 
[2025-06-06 23:23:09] 2025-06-06 21:22:50,315 | INFO     | exitcode: 0
[2025-06-06 23:23:09] 2025-06-06 21:22:50,315 | INFO     | exitmsg: OK
[2025-06-06 23:23:09] 2025-06-06 21:22:50,315 | INFO     | cpuconsumptiontime: 18727 s
[2025-06-06 23:23:09] 2025-06-06 21:22:50,315 | INFO     | nevents: 400
[2025-06-06 23:23:09] 2025-06-06 21:22:50,315 | INFO     | neventsw: 0
[2025-06-06 23:23:09] 2025-06-06 21:22:50,315 | INFO     | pid: 2186225
[2025-06-06 23:23:09] 2025-06-06 21:22:50,315 | INFO     | pgrp: 2186225
[2025-06-06 23:23:09] 2025-06-06 21:22:50,315 | INFO     | corecount: 4
[2025-06-06 23:23:09] 2025-06-06 21:22:50,315 | INFO     | event service: False
[2025-06-06 23:23:09] 2025-06-06 21:22:50,315 | INFO     | sizes: {0: 2397073, 1: 2397328, 3: 2397534, 11: 2397562, 4960: 2423850, 4961: 2432813, 4964: 2432997, 4968: 2433167}
[2025-06-06 23:23:09] 2025-06-06 21:22:50,315 | INFO     | --------------------------------------------------
[2025-06-06 23:23:09] 2025-06-06 21:22:50,315 | INFO     | 
[2025-06-06 23:23:09] 2025-06-06 21:22:50,315 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2025-06-06 23:23:09] 2025-06-06 21:22:50,327 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,328 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,328 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,328 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,328 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,328 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,328 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,328 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,328 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,328 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,328 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,328 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,328 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,328 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,328 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,328 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,328 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,328 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 23:23:09] 2025-06-06 21:22:50,328 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,329 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 23:23:09] 2025-06-06 21:22:50,329 | INFO     | job 6677419280 has completed (purged errors)
[2025-06-06 23:23:09] 2025-06-06 21:22:50,329 | INFO     | overall cleanup function is called
[2025-06-06 23:23:09] 2025-06-06 21:22:51,335 | INFO     | --- collectZombieJob: --- 10, [2186225]
[2025-06-06 23:23:09] 2025-06-06 21:22:51,336 | INFO     | zombie collector waiting for pid 2186225
[2025-06-06 23:23:09] 2025-06-06 21:22:51,336 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 23:23:09] 2025-06-06 21:22:51,336 | INFO     | collected zombie processes
[2025-06-06 23:23:09] 2025-06-06 21:22:51,336 | INFO     | will attempt to kill all subprocesses of pid=2186225
[2025-06-06 23:23:09] 2025-06-06 21:22:51,446 | INFO     | process IDs to be killed: [2186225] (in reverse order)
[2025-06-06 23:23:09] 2025-06-06 21:22:51,491 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 23:23:09] 2025-06-06 21:22:51,492 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 23:23:09] 2025-06-06 21:22:51,496 | INFO     | did not find any defunct processes belonging to 2186225
[2025-06-06 23:23:09] 2025-06-06 21:22:51,500 | INFO     | did not find any defunct processes belonging to 2186225
[2025-06-06 23:23:09] 2025-06-06 21:22:51,500 | INFO     | ready for new job
[2025-06-06 23:23:09] 2025-06-06 21:22:51,500 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 23:23:09] 2025-06-06 21:22:51,501 | INFO     | **************************************
[2025-06-06 23:23:09] 2025-06-06 21:22:51,501 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 23:23:09] 2025-06-06 21:22:51,501 | INFO     | **************************************
[2025-06-06 23:23:09] 2025-06-06 21:22:51,501 | INFO     | 
[2025-06-06 23:23:09] 2025-06-06 21:22:51,503 | INFO     | architecture information:
[2025-06-06 23:23:09] 2025-06-06 21:22:51,503 | INFO     | executing command: cat /etc/os-release
[2025-06-06 23:23:09] 2025-06-06 21:22:51,512 | INFO     | cat /etc/os-release:
[2025-06-06 23:23:09] NAME="CentOS Linux"
[2025-06-06 23:23:09] VERSION="7 (Core)"
[2025-06-06 23:23:09] ID="centos"
[2025-06-06 23:23:09] ID_LIKE="rhel fedora"
[2025-06-06 23:23:09] VERSION_ID="7"
[2025-06-06 23:23:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 23:23:09] ANSI_COLOR="0;31"
[2025-06-06 23:23:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 23:23:09] HOME_URL="https://www.centos.org/"
[2025-06-06 23:23:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 23:23:09] 
[2025-06-06 23:23:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 23:23:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 23:23:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 23:23:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 23:23:09] 
[2025-06-06 23:23:09] 2025-06-06 21:22:51,512 | INFO     | **************************************
[2025-06-06 23:23:09] 2025-06-06 21:22:52,015 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2025-06-06 23:23:09] 2025-06-06 21:22:52,024 | INFO     | sufficient remaining disk space (715352178688 B)
[2025-06-06 23:23:09] 2025-06-06 21:22:52,024 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 23:23:09] 2025-06-06 21:22:52,024 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 23:23:09] 2025-06-06 21:22:52,024 | INFO     | update_server=False
[2025-06-06 23:23:09] 2025-06-06 21:22:52,024 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 23:23:09] 2025-06-06 21:22:52,025 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 23:23:09] 2025-06-06 21:22:52,025 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 23:23:09] 2025-06-06 21:22:52,025 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 23:23:09] 2025-06-06 21:22:52,025 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 23:23:09] 2025-06-06 21:22:52,025 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 23:23:09] 2025-06-06 21:22:52,054 | INFO     | all data control threads have been joined
[2025-06-06 23:23:09] 2025-06-06 21:22:52,148 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 23:23:09] 2025-06-06 21:22:52,360 | INFO     | all payload control threads have been joined
[2025-06-06 23:23:09] 2025-06-06 21:22:52,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 23:23:09] 2025-06-06 21:22:52,845 | INFO     | aborting loop
[2025-06-06 23:23:09] 2025-06-06 21:22:53,030 | INFO     | [job] retrieve thread has finished
[2025-06-06 23:23:09] 2025-06-06 21:22:53,030 | INFO     | [job] queue monitor thread has finished
[2025-06-06 23:23:09] 2025-06-06 21:22:53,060 | INFO     | [data] control thread has finished
[2025-06-06 23:23:09] 2025-06-06 21:22:53,103 | INFO     | [payload] failed_post thread has finished
[2025-06-06 23:23:09] 2025-06-06 21:22:53,201 | INFO     | all job control threads have been joined
[2025-06-06 23:23:09] 2025-06-06 21:22:53,251 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 23:23:09] 2025-06-06 21:22:53,365 | INFO     | [payload] control thread has finished
[2025-06-06 23:23:09] 2025-06-06 21:22:53,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 23:23:09] 2025-06-06 21:22:53,850 | INFO     | [job] job monitor thread has finished
[2025-06-06 23:23:09] 2025-06-06 21:22:53,911 | INFO     | [data] copytool_in thread has finished
[2025-06-06 23:23:09] 2025-06-06 21:22:53,958 | INFO     | [job] validate thread has finished
[2025-06-06 23:23:09] 2025-06-06 21:22:53,961 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 23:23:09] 2025-06-06 21:22:53,997 | INFO     | [payload] validate_post thread has finished
[2025-06-06 23:23:09] 2025-06-06 21:22:54,030 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 23:23:09] 2025-06-06 21:22:54,207 | INFO     | [job] control thread has finished
[2025-06-06 23:23:09] 2025-06-06 21:22:55,430 | INFO     | [data] copytool_out thread has finished
[2025-06-06 23:23:09] 2025-06-06 21:22:56,154 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 23:23:09] 2025-06-06 21:23:02,318 | INFO     | job.realtimelogging is not enabled
[2025-06-06 23:23:09] 2025-06-06 21:23:03,323 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 23:23:09] 2025-06-06 21:23:04,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23010906167104)>', '<ExcThread(monitor, started 23010666837760)>']
[2025-06-06 23:23:09] 2025-06-06 21:23:05,090 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 23:23:09] 2025-06-06 21:23:05,091 | INFO     | [monitor] control thread has ended
[2025-06-06 23:23:09] 2025-06-06 21:23:09,454 | INFO     | all workflow threads have been joined
[2025-06-06 23:23:09] 2025-06-06 21:23:09,454 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 23:23:09] 2025-06-06 21:23:09,454 | INFO     | traces error code: 0
[2025-06-06 23:23:09] 2025-06-06 21:23:09,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 23:23:09] 2025-06-06 21:23:09,527 [wrapper] ==== pilot stdout END ====
[2025-06-06 23:23:09] 2025-06-06 21:23:09,529 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 23:23:09] 2025-06-06 21:23:09,531 [wrapper] pilotpid: 2178978
[2025-06-06 23:23:09] 2025-06-06 21:23:09,532 [wrapper] Pilot exit status: 0
[2025-06-06 23:23:09] 2025-06-06 21:23:09,539 [wrapper] pandaids: 6677419280
[2025-06-06 23:23:09] 2025-06-06 21:23:09,568 [wrapper] cleanup supervisor_pilot 2292827 2178979
[2025-06-06 23:23:09] 2025-06-06 21:23:09,569 [wrapper] Test setup, not cleaning
[2025-06-06 23:23:09] 2025-06-06 21:23:09,571 [wrapper] apfmon messages muted
[2025-06-06 23:23:09] 2025-06-06 21:23:09,573 [wrapper] ==== wrapper stdout END ====
[2025-06-06 23:23:09] 2025-06-06 21:23:09,574 [wrapper] ==== wrapper stderr END ====
[2025-06-06 23:23:09]  *** Error codes and diagnostics ***
[2025-06-06 23:23:09]     "exeErrorCode": 0,
[2025-06-06 23:23:09]     "exeErrorDiag": "",
[2025-06-06 23:23:09]     "pilotErrorCode": 0,
[2025-06-06 23:23:09]     "pilotErrorDiag": "",
[2025-06-06 23:23:09]  *** Listing of results directory ***
[2025-06-06 23:23:09] total 386452
[2025-06-06 23:23:09] -rw-r--r-- 1 boinc boinc    495897 Jun  3 01:04 pilot3.tar.gz
[2025-06-06 23:23:09] -rw-r--r-- 1 boinc boinc      5111 Jun  3 01:12 queuedata.json
[2025-06-06 23:23:09] -rwx------ 1 boinc boinc     37140 Jun  3 01:13 runpilot2-wrapper.sh
[2025-06-06 23:23:09] -rw-r--r-- 1 boinc boinc       100 Jun  6 21:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 23:23:09] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 21:59 run_atlas
[2025-06-06 23:23:09] -rw-r--r-- 1 boinc boinc       105 Jun  6 21:59 job.xml
[2025-06-06 23:23:09] -rw-r--r-- 2 boinc boinc 213986596 Jun  6 21:59 EVNT.45006593._000563.pool.root.1
[2025-06-06 23:23:09] -rw-r--r-- 1 boinc boinc      6636 Jun  6 21:59 init_data.xml
[2025-06-06 23:23:09] -rw-r--r-- 2 boinc boinc     15093 Jun  6 21:59 start_atlas.sh
[2025-06-06 23:23:09] drwxrwx--x 2 boinc boinc      4096 Jun  6 21:59 shared
[2025-06-06 23:23:09] -rw-r--r-- 2 boinc boinc    508880 Jun  6 21:59 input.tar.gz
[2025-06-06 23:23:09] -rw-r--r-- 1 boinc boinc         0 Jun  6 21:59 boinc_lockfile
[2025-06-06 23:23:09] -rw-r--r-- 1 boinc boinc      2523 Jun  6 21:59 pandaJob.out
[2025-06-06 23:23:09] -rw------- 1 boinc boinc    985748 Jun  6 21:59 agis_schedconf.cvmfs.json
[2025-06-06 23:23:09] -rw------- 1 boinc boinc   1598969 Jun  6 21:59 agis_ddmendpoints.agis.ALL.json
[2025-06-06 23:23:09] drwx------ 4 boinc boinc      4096 Jun  6 21:59 pilot3
[2025-06-06 23:23:09] -rw-r--r-- 1 boinc boinc       529 Jun  6 23:22 boinc_task_state.xml
[2025-06-06 23:23:09] -rw------- 1 boinc boinc 176387734 Jun  6 23:22 HITS.45006595._014074.pool.root.1
[2025-06-06 23:23:09] -rw------- 1 boinc boinc        95 Jun  6 23:22 pilot_heartbeat.json
[2025-06-06 23:23:09] -rw------- 1 boinc boinc      1026 Jun  6 23:22 memory_monitor_summary.json
[2025-06-06 23:23:09] -rw------- 1 boinc boinc    258625 Jun  6 23:22 log.45006595._014074.job.log.tgz.1
[2025-06-06 23:23:09] -rw------- 1 boinc boinc      7715 Jun  6 23:22 heartbeat.json
[2025-06-06 23:23:09] -rw-r--r-- 1 boinc boinc      8192 Jun  6 23:22 boinc_mmap_file
[2025-06-06 23:23:09] -rw-r--r-- 1 boinc boinc        27 Jun  6 23:22 wrapper_checkpoint.txt
[2025-06-06 23:23:09] -rw------- 1 boinc boinc      4558 Jun  6 23:23 pilotlog.txt
[2025-06-06 23:23:09] -rw------- 1 boinc boinc    503409 Jun  6 23:23 log.45006595._014074.job.log.1
[2025-06-06 23:23:09] -rw------- 1 boinc boinc       357 Jun  6 23:23 output.list
[2025-06-06 23:23:09] -rw-r--r-- 1 boinc boinc       620 Jun  6 23:23 runtime_log
[2025-06-06 23:23:09] -rw------- 1 boinc boinc    778240 Jun  6 23:23 result.tar.gz
[2025-06-06 23:23:09] -rw-r--r-- 1 boinc boinc      9025 Jun  6 23:23 runtime_log.err
[2025-06-06 23:23:09] -rw------- 1 boinc boinc       660 Jun  6 23:23 CrmMDmmWTg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmC6gKDm7Xs8Eo.diag
[2025-06-06 23:23:09] -rw-r--r-- 1 boinc boinc     21514 Jun  6 23:23 stderr.txt
[2025-06-06 23:23:09] HITS file was successfully produced:
[2025-06-06 23:23:09] -rw------- 1 boinc boinc 176387734 Jun  6 23:22 shared/HITS.pool.root.1
[2025-06-06 23:23:09]  *** Contents of shared directory: ***
[2025-06-06 23:23:09] total 382512
[2025-06-06 23:23:09] -rw-r--r-- 2 boinc boinc 213986596 Jun  6 21:59 ATLAS.root_0
[2025-06-06 23:23:09] -rw-r--r-- 2 boinc boinc     15093 Jun  6 21:59 start_atlas.sh
[2025-06-06 23:23:09] -rw-r--r-- 2 boinc boinc    508880 Jun  6 21:59 input.tar.gz
[2025-06-06 23:23:09] -rw------- 1 boinc boinc 176387734 Jun  6 23:22 HITS.pool.root.1
[2025-06-06 23:23:09] -rw------- 1 boinc boinc    778240 Jun  6 23:23 result.tar.gz
23:23:11 (2175286): run_atlas exited; CPU time 18784.523899
23:23:11 (2175286): called boinc_finish(0)

</stderr_txt>
]]>

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