Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:13:22 (2793): wrapper (7.7.26015): starting
13:13:22 (2793): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:13:22] Arguments: --nthreads 8
[2025-06-03 13:13:22] Threads: 8
[2025-06-03 13:13:22] Checking for CVMFS
[2025-06-03 13:13:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:13:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:13:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:13:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:13:24] 2.11.2.0 30898 31681 90184 146737 3 114 23593832 25165824 4353 130560 0 15745474 99.808 18183445 2320 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 13:13:24] CVMFS is ok
[2025-06-03 13:13:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:13:24] Checking for apptainer binary...
[2025-06-03 13:13:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:13:24] Running /usr/bin/apptainer --version
[2025-06-03 13:13:24] apptainer version 1.3.2-1.el7
[2025-06-03 13:13:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:13:26] cg-vwn285.simple-grid.lan
[2025-06-03 13:13:26] apptainer works
[2025-06-03 13:13:26] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:13:26] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:13:26] Starting ATLAS job with PandaID=6677419251
[2025-06-03 13:13:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:22:18]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:22:18] 2025-06-03 15:02:22,406 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6677419251/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 17:22:18] 2025-06-03 15:02:22,406 | INFO     | extracted standard info from prmon json
[2025-06-03 17:22:18] 2025-06-03 15:02:22,407 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:22:18] 2025-06-03 15:02:22,407 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:22:18] 2025-06-03 15:02:22,407 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:22:18] 2025-06-03 15:02:22,407 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:22:18] 2025-06-03 15:02:22,412 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:22:18] 2025-06-03 15:02:22,413 | INFO     | sum of square deviations: 3438620752.0
[2025-06-03 17:22:18] 2025-06-03 15:02:22,414 | INFO     | sum of deviations: 32450530510.0
[2025-06-03 17:22:18] 2025-06-03 15:02:22,415 | INFO     | mean x: 1748956057.0
[2025-06-03 17:22:18] 2025-06-03 15:02:22,415 | INFO     | mean y: 2451273.3139013452
[2025-06-03 17:22:18] 2025-06-03 15:02:22,415 | INFO     | -- intersect: -16502582570.653255
[2025-06-03 17:22:18] 2025-06-03 15:02:22,415 | INFO     | intersect: -16502582570.653255
[2025-06-03 17:22:18] 2025-06-03 15:02:22,415 | INFO     | chi2: 2.3154077702891236
[2025-06-03 17:22:18] 2025-06-03 15:02:22,416 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 17:22:18] 2025-06-03 15:02:22,417 | INFO     | sum of deviations: 46083459061.999985
[2025-06-03 17:22:18] 2025-06-03 15:02:22,418 | INFO     | mean x: 1748955904.5
[2025-06-03 17:22:18] 2025-06-03 15:02:22,418 | INFO     | mean y: 2460286.119266055
[2025-06-03 17:22:18] 2025-06-03 15:02:22,418 | INFO     | -- intersect: -25086644412.440372
[2025-06-03 17:22:18] 2025-06-03 15:02:22,418 | INFO     | intersect: -25086644412.440372
[2025-06-03 17:22:18] 2025-06-03 15:02:22,418 | INFO     | chi2: 1.5424167857441318
[2025-06-03 17:22:18] 2025-06-03 15:02:22,418 | INFO     | current chi2=1.5424167857441318 (change=33.384658826141404 %)
[2025-06-03 17:22:18] 2025-06-03 15:02:22,419 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 17:22:18] 2025-06-03 15:02:22,420 | INFO     | sum of deviations: 44757903137.0
[2025-06-03 17:22:18] 2025-06-03 15:02:22,421 | INFO     | mean x: 1748955752.0
[2025-06-03 17:22:18] 2025-06-03 15:02:22,421 | INFO     | mean y: 2459350.1502347416
[2025-06-03 17:22:18] 2025-06-03 15:02:22,421 | INFO     | -- intersect: -26121613880.062347
[2025-06-03 17:22:18] 2025-06-03 15:02:22,421 | INFO     | intersect: -26121613880.062347
[2025-06-03 17:22:18] 2025-06-03 15:02:22,421 | INFO     | chi2: 1.5428315740943535
[2025-06-03 17:22:18] 2025-06-03 15:02:22,421 | INFO     | current chi2=1.5428315740943535 (change=-0.02689210556156983 %)
[2025-06-03 17:22:18] 2025-06-03 15:02:22,422 | INFO     | right removable region: 212
[2025-06-03 17:22:18] 2025-06-03 15:02:22,422 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 17:22:18] 2025-06-03 15:02:22,424 | INFO     | sum of deviations: -3589514347.5
[2025-06-03 17:22:18] 2025-06-03 15:02:22,424 | INFO     | mean x: 1748956209.5
[2025-06-03 17:22:18] 2025-06-03 15:02:22,424 | INFO     | mean y: 2475349.5
[2025-06-03 17:22:18] 2025-06-03 15:02:22,424 | INFO     | -- intersect: 1956706191.099544
[2025-06-03 17:22:18] 2025-06-03 15:02:22,424 | INFO     | intersect: 1956706191.099544
[2025-06-03 17:22:18] 2025-06-03 15:02:22,424 | INFO     | chi2: 0.8041722453960094
[2025-06-03 17:22:18] 2025-06-03 15:02:22,425 | INFO     | current chi2=0.8041722453960094 (change=65.26865566769723 %)
[2025-06-03 17:22:18] 2025-06-03 15:02:22,425 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 17:22:18] 2025-06-03 15:02:22,427 | INFO     | sum of deviations: -4174770887.0
[2025-06-03 17:22:18] 2025-06-03 15:02:22,427 | INFO     | mean x: 1748956362.0
[2025-06-03 17:22:18] 2025-06-03 15:02:22,427 | INFO     | mean y: 2475775.0
[2025-06-03 17:22:18] 2025-06-03 15:02:22,427 | INFO     | -- intersect: 2439186406.329635
[2025-06-03 17:22:18] 2025-06-03 15:02:22,427 | INFO     | intersect: 2439186406.329635
[2025-06-03 17:22:18] 2025-06-03 15:02:22,428 | INFO     | chi2: 0.79379241748719
[2025-06-03 17:22:18] 2025-06-03 15:02:22,428 | INFO     | current chi2=0.79379241748719 (change=1.2907468478606767 %)
[2025-06-03 17:22:18] 2025-06-03 15:02:22,428 | INFO     | left removable region: 20
[2025-06-03 17:22:18] 2025-06-03 15:02:22,428 | INFO     | sum of square deviations: 2194675568.0
[2025-06-03 17:22:18] 2025-06-03 15:02:22,430 | INFO     | sum of deviations: 6238526760.500001
[2025-06-03 17:22:18] 2025-06-03 15:02:22,430 | INFO     | mean x: 1748956331.5
[2025-06-03 17:22:18] 2025-06-03 15:02:22,430 | INFO     | mean y: 2487796.6197916665
[2025-06-03 17:22:18] 2025-06-03 15:02:22,430 | INFO     | -- intersect: -4969049243.34085
[2025-06-03 17:22:18] 2025-06-03 15:02:22,430 | INFO     | intersect: -4969049243.34085
[2025-06-03 17:22:18] 2025-06-03 15:02:22,430 | INFO     | chi2: 0.0004243613239168617
[2025-06-03 17:22:18] 2025-06-03 15:02:22,431 | INFO     | -- intersect: -4969049243.34085
[2025-06-03 17:22:18] 2025-06-03 15:02:22,431 | INFO     | current memory leak: 2.84 B/s (using 192 data points, chi2=0.00)
[2025-06-03 17:22:18] 2025-06-03 15:02:22,432 | INFO     | ..............................
[2025-06-03 17:22:18] 2025-06-03 15:02:22,432 | INFO     | . Timing measurements:
[2025-06-03 17:22:18] 2025-06-03 15:02:22,432 | INFO     | . get job = 0 s
[2025-06-03 17:22:18] 2025-06-03 15:02:22,432 | INFO     | . initial setup = 2 s
[2025-06-03 17:22:18] 2025-06-03 15:02:22,432 | INFO     | . payload setup = 13 s
[2025-06-03 17:22:18] 2025-06-03 15:02:22,432 | INFO     | . stage-in = 0 s
[2025-06-03 17:22:18] 2025-06-03 15:02:22,432 | INFO     | . payload execution = 13584 s
[2025-06-03 17:22:18] 2025-06-03 15:02:22,432 | INFO     | . stage-out = 5 s
[2025-06-03 17:22:18] 2025-06-03 15:02:22,432 | INFO     | . log creation = 1 s
[2025-06-03 17:22:18] 2025-06-03 15:02:22,433 | INFO     | ..............................
[2025-06-03 17:22:18] 2025-06-03 15:02:22,876 | INFO     | 
[2025-06-03 17:22:18] 2025-06-03 15:02:22,876 | INFO     | job summary report
[2025-06-03 17:22:18] 2025-06-03 15:02:22,877 | INFO     | --------------------------------------------------
[2025-06-03 17:22:18] 2025-06-03 15:02:22,877 | INFO     | PanDA job id: 6677419251
[2025-06-03 17:22:18] 2025-06-03 15:02:22,877 | INFO     | task id: 45006595
[2025-06-03 17:22:18] 2025-06-03 15:02:22,877 | INFO     | errors: (none)
[2025-06-03 17:22:18] 2025-06-03 15:02:22,877 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:22:18] 2025-06-03 15:02:22,877 | INFO     | pilot state: finished 
[2025-06-03 17:22:18] 2025-06-03 15:02:22,877 | INFO     | transexitcode: 0
[2025-06-03 17:22:18] 2025-06-03 15:02:22,877 | INFO     | exeerrorcode: 0
[2025-06-03 17:22:18] 2025-06-03 15:02:22,877 | INFO     | exeerrordiag: 
[2025-06-03 17:22:18] 2025-06-03 15:02:22,877 | INFO     | exitcode: 0
[2025-06-03 17:22:18] 2025-06-03 15:02:22,877 | INFO     | exitmsg: OK
[2025-06-03 17:22:18] 2025-06-03 15:02:22,877 | INFO     | cpuconsumptiontime: 50439 s
[2025-06-03 17:22:18] 2025-06-03 15:02:22,878 | INFO     | nevents: 400
[2025-06-03 17:22:18] 2025-06-03 15:02:22,878 | INFO     | neventsw: 0
[2025-06-03 17:22:18] 2025-06-03 15:02:22,878 | INFO     | pid: 15391
[2025-06-03 17:22:18] 2025-06-03 15:02:22,878 | INFO     | pgrp: 15391
[2025-06-03 17:22:18] 2025-06-03 15:02:22,878 | INFO     | corecount: 8
[2025-06-03 17:22:18] 2025-06-03 15:02:22,878 | INFO     | event service: False
[2025-06-03 17:22:18] 2025-06-03 15:02:22,878 | INFO     | sizes: {0: 2405012, 1: 2405211, 11: 2405417, 12: 2405445, 13601: 2435144, 13607: 2444115, 13610: 2444299, 13693: 2444469}
[2025-06-03 17:22:18] 2025-06-03 15:02:22,878 | INFO     | --------------------------------------------------
[2025-06-03 17:22:18] 2025-06-03 15:02:22,878 | INFO     | 
[2025-06-03 17:22:18] 2025-06-03 15:02:22,878 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-06-03 17:22:18] 2025-06-03 15:02:23,300 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,300 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,300 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,300 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,300 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,300 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,301 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,301 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,301 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,301 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,301 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,301 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,301 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,302 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:22:18] 2025-06-03 15:02:23,302 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,302 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:22:18] 2025-06-03 15:02:23,302 | INFO     | job 6677419251 has completed (purged errors)
[2025-06-03 17:22:18] 2025-06-03 15:02:23,302 | INFO     | overall cleanup function is called
[2025-06-03 17:22:18] 2025-06-03 15:02:24,314 | INFO     | --- collectZombieJob: --- 10, [15391]
[2025-06-03 17:22:18] 2025-06-03 15:02:24,314 | INFO     | zombie collector waiting for pid 15391
[2025-06-03 17:22:18] 2025-06-03 15:02:24,315 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:22:18] 2025-06-03 15:02:24,315 | INFO     | collected zombie processes
[2025-06-03 17:22:18] 2025-06-03 15:02:24,315 | INFO     | will attempt to kill all subprocesses of pid=15391
[2025-06-03 17:22:18] 2025-06-03 15:02:24,440 | INFO     | process IDs to be killed: [15391] (in reverse order)
[2025-06-03 17:22:18] 2025-06-03 15:02:25,208 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:22:18] 2025-06-03 15:02:25,208 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:22:18] 2025-06-03 15:02:25,211 | INFO     | did not find any defunct processes belonging to 15391
[2025-06-03 17:22:18] 2025-06-03 15:02:25,214 | INFO     | did not find any defunct processes belonging to 15391
[2025-06-03 17:22:18] 2025-06-03 15:02:25,215 | INFO     | ready for new job
[2025-06-03 17:22:18] 2025-06-03 15:02:25,215 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:22:18] 2025-06-03 15:02:25,217 | INFO     | **************************************
[2025-06-03 17:22:18] 2025-06-03 15:02:25,217 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:22:18] 2025-06-03 15:02:25,217 | INFO     | **************************************
[2025-06-03 17:22:18] 2025-06-03 15:02:25,217 | INFO     | 
[2025-06-03 17:22:18] 2025-06-03 15:02:25,217 | INFO     | pilot is running in a VM
[2025-06-03 17:22:18] 2025-06-03 15:02:25,218 | INFO     | architecture information:
[2025-06-03 17:22:18] 2025-06-03 15:02:25,229 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:22:18] 2025-06-03 15:02:25,415 | INFO     | cat /etc/os-release:
[2025-06-03 17:22:18] NAME="CentOS Linux"
[2025-06-03 17:22:18] VERSION="7 (Core)"
[2025-06-03 17:22:18] ID="centos"
[2025-06-03 17:22:18] ID_LIKE="rhel fedora"
[2025-06-03 17:22:18] VERSION_ID="7"
[2025-06-03 17:22:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:22:18] ANSI_COLOR="0;31"
[2025-06-03 17:22:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:22:18] HOME_URL="https://www.centos.org/"
[2025-06-03 17:22:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:22:18] 
[2025-06-03 17:22:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:22:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:22:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:22:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:22:18] 
[2025-06-03 17:22:18] 2025-06-03 15:02:25,415 | INFO     | **************************************
[2025-06-03 17:22:18] 2025-06-03 15:02:25,919 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-06-03 17:22:18] 2025-06-03 15:02:25,974 | INFO     | sufficient remaining disk space (496776511488 B)
[2025-06-03 17:22:18] 2025-06-03 15:02:25,974 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:22:18] 2025-06-03 15:02:25,975 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:22:18] 2025-06-03 15:02:25,975 | INFO     | update_server=False
[2025-06-03 17:22:18] 2025-06-03 15:02:25,975 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:22:18] 2025-06-03 15:02:26,045 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:22:18] 2025-06-03 15:02:26,046 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:22:18] 2025-06-03 15:02:26,046 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:22:18] 2025-06-03 15:02:26,237 | INFO     | all job control threads have been joined
[2025-06-03 17:22:18] 2025-06-03 15:02:26,563 | INFO     | all payload control threads have been joined
[2025-06-03 17:22:18] 2025-06-03 15:02:26,866 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:22:18] 2025-06-03 15:02:26,867 | INFO     | aborting loop
[2025-06-03 17:22:18] 2025-06-03 15:02:26,932 | INFO     | all data control threads have been joined
[2025-06-03 17:22:18] 2025-06-03 15:02:26,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:22:18] 2025-06-03 15:02:26,980 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:22:18] 2025-06-03 15:02:27,150 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:22:18] 2025-06-03 15:02:27,224 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:22:18] 2025-06-03 15:02:27,242 | INFO     | [job] control thread has finished
[2025-06-03 17:22:18] 2025-06-03 15:02:27,457 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:22:18] 2025-06-03 15:02:27,473 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:22:18] 2025-06-03 15:02:27,569 | INFO     | [payload] control thread has finished
[2025-06-03 17:22:18] 2025-06-03 15:02:27,612 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:22:18] 2025-06-03 15:02:27,731 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:22:18] 2025-06-03 15:02:27,735 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:22:18] 2025-06-03 15:02:27,767 | INFO     | [job] validate thread has finished
[2025-06-03 17:22:18] 2025-06-03 15:02:27,872 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:22:18] 2025-06-03 15:02:27,938 | INFO     | [data] control thread has finished
[2025-06-03 17:22:18] 2025-06-03 15:02:28,200 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:22:18] 2025-06-03 15:02:28,420 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:22:18] 2025-06-03 15:02:28,618 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:22:18] 2025-06-03 15:02:29,480 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:22:18] 2025-06-03 15:02:30,962 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:22:18] 2025-06-03 15:02:32,779 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140689828706112)>', '<ExcThread(monitor, started 140689530660608)>']
[2025-06-03 17:22:18] 2025-06-03 15:02:33,087 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:22:18] 2025-06-03 15:02:33,087 | INFO     | [monitor] control thread has ended
[2025-06-03 17:22:18] 2025-06-03 15:02:37,805 | INFO     | all workflow threads have been joined
[2025-06-03 17:22:18] 2025-06-03 15:02:37,805 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:22:18] 2025-06-03 15:02:37,806 | INFO     | traces error code: 0
[2025-06-03 17:22:18] 2025-06-03 15:02:37,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:22:18] 2025-06-03 15:02:38,019 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:22:18] 2025-06-03 15:02:38,083 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:22:18] 2025-06-03 15:02:38,176 [wrapper] pilotpid: 6829
[2025-06-03 17:22:18] 2025-06-03 15:02:38,296 [wrapper] Pilot exit status: 0
[2025-06-03 17:22:18] 2025-06-03 15:02:38,726 [wrapper] pandaids: 6677419251
[2025-06-03 17:22:18] 2025-06-03 15:02:38,764 [wrapper] cleanup supervisor_pilot 15000 6830
[2025-06-03 17:22:18] 2025-06-03 15:02:38,770 [wrapper] Test setup, not cleaning
[2025-06-03 17:22:18] 2025-06-03 15:02:38,847 [wrapper] apfmon messages muted
[2025-06-03 17:22:18] 2025-06-03 15:02:38,932 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:22:18] 2025-06-03 15:02:38,996 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:22:18]  *** Error codes and diagnostics ***
[2025-06-03 17:22:18]     "exeErrorCode": 0,
[2025-06-03 17:22:18]     "exeErrorDiag": "",
[2025-06-03 17:22:18]     "pilotErrorCode": 0,
[2025-06-03 17:22:18]     "pilotErrorDiag": "",
[2025-06-03 17:22:18]  *** Listing of results directory ***
[2025-06-03 17:22:18] total 394348
[2025-06-03 17:22:18] -rw-r--r--. 1 boinc boinc    495897 Jun  3 01:04 pilot3.tar.gz
[2025-06-03 17:22:18] -rw-r--r--. 1 boinc boinc      5111 Jun  3 01:10 queuedata.json
[2025-06-03 17:22:18] -rwx------. 1 boinc boinc     37140 Jun  3 01:11 runpilot2-wrapper.sh
[2025-06-03 17:22:18] -rw-r--r--. 1 boinc boinc       100 Jun  3 13:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:22:18] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 13:13 run_atlas
[2025-06-03 17:22:18] -rw-r--r--. 1 boinc boinc       105 Jun  3 13:13 job.xml
[2025-06-03 17:22:18] -rw-r--r--. 2 boinc boinc 216336421 Jun  3 13:13 EVNT.45006593._000562.pool.root.1
[2025-06-03 17:22:18] -rw-r--r--. 2 boinc boinc    508883 Jun  3 13:13 input.tar.gz
[2025-06-03 17:22:18] -rw-r--r--. 1 boinc boinc      6392 Jun  3 13:13 init_data.xml
[2025-06-03 17:22:18] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:13 start_atlas.sh
[2025-06-03 17:22:18] drwxrwx--x. 2 boinc boinc        68 Jun  3 13:13 shared
[2025-06-03 17:22:18] -rw-r--r--. 1 boinc boinc         0 Jun  3 13:13 boinc_lockfile
[2025-06-03 17:22:18] -rw-r--r--. 1 boinc boinc      2524 Jun  3 13:13 pandaJob.out
[2025-06-03 17:22:18] -rw-------. 1 boinc boinc    985490 Jun  3 13:13 agis_schedconf.cvmfs.json
[2025-06-03 17:22:18] drwx------. 4 boinc boinc      4096 Jun  3 13:13 pilot3
[2025-06-03 17:22:18] -rw-------. 1 boinc boinc 180484974 Jun  3 16:59 HITS.45006595._014045.pool.root.1
[2025-06-03 17:22:18] -rw-r--r--. 1 boinc boinc       531 Jun  3 16:59 boinc_task_state.xml
[2025-06-03 17:22:18] -rw-------. 1 boinc boinc      1020 Jun  3 17:00 memory_monitor_summary.json
[2025-06-03 17:22:18] -rw-------. 1 boinc boinc   1603667 Jun  3 17:00 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:22:18] -rw-------. 1 boinc boinc    390202 Jun  3 17:00 log.45006595._014045.job.log.tgz.1
[2025-06-03 17:22:18] -rw-------. 1 boinc boinc      7691 Jun  3 17:02 heartbeat.json
[2025-06-03 17:22:18] -rw-------. 1 boinc boinc        95 Jun  3 17:02 pilot_heartbeat.json
[2025-06-03 17:22:18] -rw-------. 1 boinc boinc      4417 Jun  3 17:02 pilotlog.txt
[2025-06-03 17:22:18] -rw-------. 1 boinc boinc   1193121 Jun  3 17:02 log.45006595._014045.job.log.1
[2025-06-03 17:22:18] -rw-------. 1 boinc boinc       357 Jun  3 17:02 output.list
[2025-06-03 17:22:18] -rw-r--r--. 1 boinc boinc       620 Jun  3 17:02 runtime_log
[2025-06-03 17:22:18] -rw-------. 1 boinc boinc   1607680 Jun  3 17:02 result.tar.gz
[2025-06-03 17:22:18] -rw-------. 1 boinc boinc       656 Jun  3 17:02 tZ6NDmJUTg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm74gKDmSAsttm.diag
[2025-06-03 17:22:18] -rw-r--r--. 1 boinc boinc      8673 Jun  3 17:02 runtime_log.err
[2025-06-03 17:22:18] -rw-r--r--. 1 boinc boinc      8192 Jun  3 17:22 boinc_mmap_file
[2025-06-03 17:22:18] -rw-r--r--. 1 boinc boinc        28 Jun  3 17:22 wrapper_checkpoint.txt
[2025-06-03 17:22:18] -rw-r--r--. 1 boinc boinc     20465 Jun  3 17:22 stderr.txt
[2025-06-03 17:22:18] HITS file was successfully produced:
[2025-06-03 17:22:18] -rw-------. 1 boinc boinc 180484974 Jun  3 16:59 shared/HITS.pool.root.1
[2025-06-03 17:22:18]  *** Contents of shared directory: ***
[2025-06-03 17:22:18] total 389612
[2025-06-03 17:22:18] -rw-r--r--. 2 boinc boinc 216336421 Jun  3 13:13 ATLAS.root_0
[2025-06-03 17:22:18] -rw-r--r--. 2 boinc boinc    508883 Jun  3 13:13 input.tar.gz
[2025-06-03 17:22:18] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:13 start_atlas.sh
[2025-06-03 17:22:18] -rw-------. 1 boinc boinc 180484974 Jun  3 16:59 HITS.pool.root.1
[2025-06-03 17:22:18] -rw-------. 1 boinc boinc   1607680 Jun  3 17:02 result.tar.gz
17:22:20 (2793): run_atlas exited; CPU time 50608.619580
17:22:20 (2793): called boinc_finish(0)

</stderr_txt>
]]>

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