Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:53:26 (5447): wrapper (7.7.26015): starting
13:53:26 (5447): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:53:26] Arguments: --nthreads 8
[2025-06-03 13:53:26] Threads: 8
[2025-06-03 13:53:26] Checking for CVMFS
[2025-06-03 13:53:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:53:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:53:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:53:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:53:28] 2.11.2.0 18542 31721 90628 146741 1 52 20514986 25165825 4482 130560 0 15455969 99.784 18058177 2264 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 13:53:28] CVMFS is ok
[2025-06-03 13:53:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:53:28] Checking for apptainer binary...
[2025-06-03 13:53:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:53:28] Running /usr/bin/apptainer --version
[2025-06-03 13:53:29] apptainer version 1.3.2-1.el7
[2025-06-03 13:53:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:26:55] cg-vwn438.simple-grid.lan
[2025-06-03 14:26:55] apptainer works
[2025-06-03 14:26:55] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:26:55] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:26:55] Starting ATLAS job with PandaID=6677419241
[2025-06-03 14:26:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:29:32]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:29:32] 2025-06-03 16:26:39,958 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:29:32] 2025-06-03 16:26:39,958 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:29:32] 2025-06-03 16:26:39,958 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:29:32] 2025-06-03 16:26:39,964 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:29:32] 2025-06-03 16:26:39,965 | INFO     | sum of square deviations: 3922276332.0
[2025-06-03 18:29:32] 2025-06-03 16:26:39,976 | INFO     | sum of deviations: -40531507218.00003
[2025-06-03 18:29:32] 2025-06-03 16:26:39,976 | INFO     | mean x: 1748960772.0
[2025-06-03 18:29:32] 2025-06-03 16:26:39,977 | INFO     | mean y: 2523453.163090129
[2025-06-03 18:29:32] 2025-06-03 16:26:39,977 | INFO     | -- intersect: 18075706001.770145
[2025-06-03 18:29:32] 2025-06-03 16:26:39,977 | INFO     | intersect: 18075706001.770145
[2025-06-03 18:29:32] 2025-06-03 16:26:39,977 | INFO     | chi2: 2.659080969689322
[2025-06-03 18:29:32] 2025-06-03 16:26:39,978 | INFO     | sum of square deviations: 3675146117.0
[2025-06-03 18:29:32] 2025-06-03 16:26:39,980 | INFO     | sum of deviations: -23913087233.499977
[2025-06-03 18:29:32] 2025-06-03 16:26:39,980 | INFO     | mean x: 1748960619.5
[2025-06-03 18:29:32] 2025-06-03 16:26:39,980 | INFO     | mean y: 2533542.9166666665
[2025-06-03 18:29:32] 2025-06-03 16:26:39,980 | INFO     | -- intersect: 11382502265.41186
[2025-06-03 18:29:32] 2025-06-03 16:26:39,980 | INFO     | intersect: 11382502265.41186
[2025-06-03 18:29:32] 2025-06-03 16:26:39,981 | INFO     | chi2: 1.893251560975622
[2025-06-03 18:29:32] 2025-06-03 16:26:39,981 | INFO     | current chi2=1.893251560975622 (change=28.800529861382028 %)
[2025-06-03 18:29:32] 2025-06-03 16:26:39,981 | INFO     | sum of square deviations: 3438620752.0
[2025-06-03 18:29:32] 2025-06-03 16:26:39,983 | INFO     | sum of deviations: -22969781372.999992
[2025-06-03 18:29:32] 2025-06-03 16:26:39,983 | INFO     | mean x: 1748960467.0
[2025-06-03 18:29:32] 2025-06-03 16:26:39,984 | INFO     | mean y: 2534151.152466368
[2025-06-03 18:29:32] 2025-06-03 16:26:39,984 | INFO     | -- intersect: 11685485675.726398
[2025-06-03 18:29:32] 2025-06-03 16:26:39,984 | INFO     | intersect: 11685485675.726398
[2025-06-03 18:29:32] 2025-06-03 16:26:39,984 | INFO     | chi2: 1.8919306699740654
[2025-06-03 18:29:32] 2025-06-03 16:26:39,984 | INFO     | current chi2=1.8919306699740654 (change=0.06976838307086078 %)
[2025-06-03 18:29:32] 2025-06-03 16:26:39,985 | INFO     | right removable region: 222
[2025-06-03 18:29:32] 2025-06-03 16:26:39,985 | INFO     | sum of square deviations: 3675146117.0
[2025-06-03 18:29:32] 2025-06-03 16:26:39,996 | INFO     | sum of deviations: -81623573448.0
[2025-06-03 18:29:32] 2025-06-03 16:26:39,997 | INFO     | mean x: 1748960924.5
[2025-06-03 18:29:32] 2025-06-03 16:26:39,997 | INFO     | mean y: 2548611.8596491227
[2025-06-03 18:29:32] 2025-06-03 16:26:39,997 | INFO     | -- intersect: 38846294121.25968
[2025-06-03 18:29:32] 2025-06-03 16:26:39,997 | INFO     | intersect: 38846294121.25968
[2025-06-03 18:29:32] 2025-06-03 16:26:39,997 | INFO     | chi2: 1.0129475279535656
[2025-06-03 18:29:32] 2025-06-03 16:26:39,998 | INFO     | current chi2=1.0129475279535656 (change=61.90610442103556 %)
[2025-06-03 18:29:32] 2025-06-03 16:26:39,998 | INFO     | sum of square deviations: 3438620752.0
[2025-06-03 18:29:32] 2025-06-03 16:26:40,000 | INFO     | sum of deviations: -80422011186.0
[2025-06-03 18:29:32] 2025-06-03 16:26:40,000 | INFO     | mean x: 1748961077.0
[2025-06-03 18:29:32] 2025-06-03 16:26:40,000 | INFO     | mean y: 2547803.0807174887
[2025-06-03 18:29:32] 2025-06-03 16:26:40,000 | INFO     | -- intersect: 40907020102.49427
[2025-06-03 18:29:32] 2025-06-03 16:26:40,000 | INFO     | intersect: 40907020102.49427
[2025-06-03 18:29:32] 2025-06-03 16:26:40,001 | INFO     | chi2: 0.9932176313776124
[2025-06-03 18:29:32] 2025-06-03 16:26:40,001 | INFO     | current chi2=0.9932176313776124 (change=1.9477708401947527 %)
[2025-06-03 18:29:32] 2025-06-03 16:26:40,001 | INFO     | left removable region: 20
[2025-06-03 18:29:32] 2025-06-03 16:26:40,002 | INFO     | sum of square deviations: 2555770710.5
[2025-06-03 18:29:32] 2025-06-03 16:26:40,003 | INFO     | sum of deviations: -49915087777.5
[2025-06-03 18:29:32] 2025-06-03 16:26:40,003 | INFO     | mean x: 1748961046.5
[2025-06-03 18:29:32] 2025-06-03 16:26:40,003 | INFO     | mean y: 2551447.5396039602
[2025-06-03 18:29:32] 2025-06-03 16:26:40,004 | INFO     | -- intersect: 34160366855.947998
[2025-06-03 18:29:32] 2025-06-03 16:26:40,004 | INFO     | intersect: 34160366855.947998
[2025-06-03 18:29:32] 2025-06-03 16:26:40,004 | INFO     | chi2: 0.19017784324489398
[2025-06-03 18:29:32] 2025-06-03 16:26:40,004 | INFO     | -- intersect: 34160366855.947998
[2025-06-03 18:29:32] 2025-06-03 16:26:40,005 | INFO     | current memory leak: -19.53 B/s (using 202 data points, chi2=0.19)
[2025-06-03 18:29:32] 2025-06-03 16:26:40,005 | INFO     | ..............................
[2025-06-03 18:29:32] 2025-06-03 16:26:40,005 | INFO     | . Timing measurements:
[2025-06-03 18:29:32] 2025-06-03 16:26:40,006 | INFO     | . get job = 0 s
[2025-06-03 18:29:32] 2025-06-03 16:26:40,006 | INFO     | . initial setup = 2 s
[2025-06-03 18:29:32] 2025-06-03 16:26:40,006 | INFO     | . payload setup = 15 s
[2025-06-03 18:29:32] 2025-06-03 16:26:40,006 | INFO     | . stage-in = 0 s
[2025-06-03 18:29:32] 2025-06-03 16:26:40,006 | INFO     | . payload execution = 14219 s
[2025-06-03 18:29:32] 2025-06-03 16:26:40,006 | INFO     | . stage-out = 3 s
[2025-06-03 18:29:32] 2025-06-03 16:26:40,006 | INFO     | . log creation = 1 s
[2025-06-03 18:29:32] 2025-06-03 16:26:40,006 | INFO     | ..............................
[2025-06-03 18:29:32] 2025-06-03 16:26:40,184 | INFO     | 
[2025-06-03 18:29:32] 2025-06-03 16:26:40,184 | INFO     | job summary report
[2025-06-03 18:29:32] 2025-06-03 16:26:40,184 | INFO     | --------------------------------------------------
[2025-06-03 18:29:32] 2025-06-03 16:26:40,185 | INFO     | PanDA job id: 6677419241
[2025-06-03 18:29:32] 2025-06-03 16:26:40,185 | INFO     | task id: 45006595
[2025-06-03 18:29:32] 2025-06-03 16:26:40,185 | INFO     | errors: (none)
[2025-06-03 18:29:32] 2025-06-03 16:26:40,185 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:29:32] 2025-06-03 16:26:40,185 | INFO     | pilot state: finished 
[2025-06-03 18:29:32] 2025-06-03 16:26:40,185 | INFO     | transexitcode: 0
[2025-06-03 18:29:32] 2025-06-03 16:26:40,185 | INFO     | exeerrorcode: 0
[2025-06-03 18:29:32] 2025-06-03 16:26:40,185 | INFO     | exeerrordiag: 
[2025-06-03 18:29:32] 2025-06-03 16:26:40,185 | INFO     | exitcode: 0
[2025-06-03 18:29:32] 2025-06-03 16:26:40,185 | INFO     | exitmsg: OK
[2025-06-03 18:29:32] 2025-06-03 16:26:40,185 | INFO     | cpuconsumptiontime: 52320 s
[2025-06-03 18:29:32] 2025-06-03 16:26:40,186 | INFO     | nevents: 400
[2025-06-03 18:29:32] 2025-06-03 16:26:40,186 | INFO     | neventsw: 0
[2025-06-03 18:29:32] 2025-06-03 16:26:40,186 | INFO     | pid: 2478
[2025-06-03 18:29:32] 2025-06-03 16:26:40,186 | INFO     | pgrp: 2478
[2025-06-03 18:29:32] 2025-06-03 16:26:40,186 | INFO     | corecount: 8
[2025-06-03 18:29:32] 2025-06-03 16:26:40,186 | INFO     | event service: False
[2025-06-03 18:29:32] 2025-06-03 16:26:40,186 | INFO     | sizes: {0: 2405011, 1: 2405210, 11: 2405416, 12: 2405444, 14239: 2435285, 14244: 2444226, 14247: 2444410, 14340: 2444580}
[2025-06-03 18:29:32] 2025-06-03 16:26:40,186 | INFO     | --------------------------------------------------
[2025-06-03 18:29:32] 2025-06-03 16:26:40,186 | INFO     | 
[2025-06-03 18:29:32] 2025-06-03 16:26:40,186 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-03 18:29:32] 2025-06-03 16:26:40,748 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,748 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,749 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,749 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,749 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,749 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,749 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,749 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,749 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,749 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,749 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,749 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,749 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,750 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,750 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,750 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,750 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,750 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:29:32] 2025-06-03 16:26:40,750 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,750 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:29:32] 2025-06-03 16:26:40,750 | INFO     | job 6677419241 has completed (purged errors)
[2025-06-03 18:29:32] 2025-06-03 16:26:40,750 | INFO     | overall cleanup function is called
[2025-06-03 18:29:32] 2025-06-03 16:26:40,977 | INFO     | PID=26316 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 18:29:32] 2025-06-03 16:26:40,978 | INFO     | .. there are 9 such processes running
[2025-06-03 18:29:32] 2025-06-03 16:26:41,759 | INFO     | --- collectZombieJob: --- 10, [2478]
[2025-06-03 18:29:32] 2025-06-03 16:26:41,759 | INFO     | zombie collector waiting for pid 2478
[2025-06-03 18:29:32] 2025-06-03 16:26:41,759 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:29:32] 2025-06-03 16:26:41,760 | INFO     | collected zombie processes
[2025-06-03 18:29:32] 2025-06-03 16:26:41,760 | INFO     | will attempt to kill all subprocesses of pid=2478
[2025-06-03 18:29:32] 2025-06-03 16:26:41,888 | INFO     | process IDs to be killed: [2478] (in reverse order)
[2025-06-03 18:29:32] 2025-06-03 16:26:42,989 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:29:32] 2025-06-03 16:26:42,990 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:29:32] 2025-06-03 16:26:42,993 | INFO     | did not find any defunct processes belonging to 2478
[2025-06-03 18:29:32] 2025-06-03 16:26:42,996 | INFO     | did not find any defunct processes belonging to 2478
[2025-06-03 18:29:32] 2025-06-03 16:26:42,996 | INFO     | ready for new job
[2025-06-03 18:29:32] 2025-06-03 16:26:42,997 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:29:32] 2025-06-03 16:26:42,999 | INFO     | **************************************
[2025-06-03 18:29:32] 2025-06-03 16:26:42,999 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:29:32] 2025-06-03 16:26:42,999 | INFO     | **************************************
[2025-06-03 18:29:32] 2025-06-03 16:26:42,999 | INFO     | 
[2025-06-03 18:29:32] 2025-06-03 16:26:43,000 | INFO     | pilot is running in a VM
[2025-06-03 18:29:32] 2025-06-03 16:26:43,000 | INFO     | architecture information:
[2025-06-03 18:29:32] 2025-06-03 16:26:43,003 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:29:32] 2025-06-03 16:26:43,086 | INFO     | cat /etc/os-release:
[2025-06-03 18:29:32] NAME="CentOS Linux"
[2025-06-03 18:29:32] VERSION="7 (Core)"
[2025-06-03 18:29:32] ID="centos"
[2025-06-03 18:29:32] ID_LIKE="rhel fedora"
[2025-06-03 18:29:32] VERSION_ID="7"
[2025-06-03 18:29:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:29:32] ANSI_COLOR="0;31"
[2025-06-03 18:29:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:29:32] HOME_URL="https://www.centos.org/"
[2025-06-03 18:29:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:29:32] 
[2025-06-03 18:29:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:29:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:29:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:29:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:29:32] 
[2025-06-03 18:29:32] 2025-06-03 16:26:43,087 | INFO     | **************************************
[2025-06-03 18:29:32] 2025-06-03 16:26:43,591 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-03 18:29:32] 2025-06-03 16:26:43,761 | INFO     | sufficient remaining disk space (496705208320 B)
[2025-06-03 18:29:32] 2025-06-03 16:26:43,761 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:29:32] 2025-06-03 16:26:43,761 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:29:32] 2025-06-03 16:26:43,761 | INFO     | update_server=False
[2025-06-03 18:29:32] 2025-06-03 16:26:43,762 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:29:32] 2025-06-03 16:26:43,762 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:29:32] 2025-06-03 16:26:43,765 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 18:29:32] 2025-06-03 16:26:43,766 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:29:32] 2025-06-03 16:26:43,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:29:32] 2025-06-03 16:26:43,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:29:32] 2025-06-03 16:26:44,231 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:29:32] 2025-06-03 16:26:44,231 | INFO     | aborting loop
[2025-06-03 18:29:32] 2025-06-03 16:26:44,293 | INFO     | all data control threads have been joined
[2025-06-03 18:29:32] 2025-06-03 16:26:44,383 | INFO     | all job control threads have been joined
[2025-06-03 18:29:32] 2025-06-03 16:26:44,727 | INFO     | all payload control threads have been joined
[2025-06-03 18:29:32] 2025-06-03 16:26:44,767 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:29:32] 2025-06-03 16:26:44,804 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:29:32] 2025-06-03 16:26:44,895 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:29:32] 2025-06-03 16:26:44,897 | INFO     | [job] validate thread has finished
[2025-06-03 18:29:32] 2025-06-03 16:26:45,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:29:32] 2025-06-03 16:26:45,199 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:29:32] 2025-06-03 16:26:45,237 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:29:32] 2025-06-03 16:26:45,299 | INFO     | [data] control thread has finished
[2025-06-03 18:29:32] 2025-06-03 16:26:45,389 | INFO     | [job] control thread has finished
[2025-06-03 18:29:32] 2025-06-03 16:26:45,523 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:29:32] 2025-06-03 16:26:45,579 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:29:32] 2025-06-03 16:26:45,733 | INFO     | [payload] control thread has finished
[2025-06-03 18:29:32] 2025-06-03 16:26:45,781 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:29:32] 2025-06-03 16:26:45,910 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:29:32] 2025-06-03 16:26:46,093 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:29:32] 2025-06-03 16:26:46,204 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:29:32] 2025-06-03 16:26:47,040 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:29:32] 2025-06-03 16:26:47,771 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:29:32] 2025-06-03 16:26:48,758 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140592600045376)>', '<ExcThread(monitor, started 140592281523968)>']
[2025-06-03 18:29:32] 2025-06-03 16:26:48,796 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:29:32] 2025-06-03 16:26:48,796 | INFO     | [monitor] control thread has ended
[2025-06-03 18:29:32] 2025-06-03 16:26:53,784 | INFO     | all workflow threads have been joined
[2025-06-03 18:29:32] 2025-06-03 16:26:53,784 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:29:32] 2025-06-03 16:26:53,785 | INFO     | traces error code: 0
[2025-06-03 18:29:32] 2025-06-03 16:26:53,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:29:32] 2025-06-03 16:26:54,019 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:29:32] 2025-06-03 16:26:54,028 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:29:32] 2025-06-03 16:26:54,094 [wrapper] pilotpid: 26316
[2025-06-03 18:29:32] 2025-06-03 16:26:54,208 [wrapper] Pilot exit status: 0
[2025-06-03 18:29:32] 2025-06-03 16:26:54,412 [wrapper] pandaids: 6677419241
[2025-06-03 18:29:32] 2025-06-03 16:26:54,852 [wrapper] cleanup supervisor_pilot  6356 26317
[2025-06-03 18:29:32] 2025-06-03 16:26:54,951 [wrapper] Test setup, not cleaning
[2025-06-03 18:29:32] 2025-06-03 16:26:55,035 [wrapper] apfmon messages muted
[2025-06-03 18:29:32] 2025-06-03 16:26:55,150 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:29:32] 2025-06-03 16:26:55,199 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:29:32]  *** Error codes and diagnostics ***
[2025-06-03 18:29:32]     "exeErrorCode": 0,
[2025-06-03 18:29:32]     "exeErrorDiag": "",
[2025-06-03 18:29:32]     "pilotErrorCode": 0,
[2025-06-03 18:29:32]     "pilotErrorDiag": "",
[2025-06-03 18:29:32]  *** Listing of results directory ***
[2025-06-03 18:29:32] total 400412
[2025-06-03 18:29:32] -rw-r--r--. 1 boinc boinc    495897 Jun  3 01:04 pilot3.tar.gz
[2025-06-03 18:29:32] -rw-r--r--. 1 boinc boinc      5111 Jun  3 01:10 queuedata.json
[2025-06-03 18:29:32] -rwx------. 1 boinc boinc     37140 Jun  3 01:11 runpilot2-wrapper.sh
[2025-06-03 18:29:32] -rw-r--r--. 1 boinc boinc       100 Jun  3 13:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:29:32] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 13:53 run_atlas
[2025-06-03 18:29:32] -rw-r--r--. 1 boinc boinc       105 Jun  3 13:53 job.xml
[2025-06-03 18:29:32] -rw-r--r--. 2 boinc boinc 216336421 Jun  3 13:53 EVNT.45006593._000562.pool.root.1
[2025-06-03 18:29:32] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:53 start_atlas.sh
[2025-06-03 18:29:32] drwxrwx--x. 2 boinc boinc        68 Jun  3 13:53 shared
[2025-06-03 18:29:32] -rw-r--r--. 2 boinc boinc    508882 Jun  3 13:53 input.tar.gz
[2025-06-03 18:29:32] -rw-r--r--. 1 boinc boinc      6392 Jun  3 13:53 init_data.xml
[2025-06-03 18:29:32] -rw-r--r--. 1 boinc boinc         0 Jun  3 13:53 boinc_lockfile
[2025-06-03 18:29:32] -rw-r--r--. 1 boinc boinc      2524 Jun  3 14:26 pandaJob.out
[2025-06-03 18:29:32] -rw-------. 1 boinc boinc    982666 Jun  3 14:27 agis_schedconf.cvmfs.json
[2025-06-03 18:29:32] drwx------. 4 boinc boinc      4096 Jun  3 14:27 pilot3
[2025-06-03 18:29:32] -rw-------. 1 boinc boinc 186606136 Jun  3 18:23 HITS.45006595._014035.pool.root.1
[2025-06-03 18:29:32] -rw-r--r--. 1 boinc boinc       530 Jun  3 18:23 boinc_task_state.xml
[2025-06-03 18:29:32] -rw-------. 1 boinc boinc      1019 Jun  3 18:24 memory_monitor_summary.json
[2025-06-03 18:29:32] -rw-------. 1 boinc boinc   1603667 Jun  3 18:25 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:29:32] -rw-------. 1 boinc boinc    383030 Jun  3 18:25 log.45006595._014035.job.log.tgz.1
[2025-06-03 18:29:32] -rw-------. 1 boinc boinc        95 Jun  3 18:26 pilot_heartbeat.json
[2025-06-03 18:29:32] -rw-------. 1 boinc boinc      7693 Jun  3 18:26 heartbeat.json
[2025-06-03 18:29:32] -rw-------. 1 boinc boinc      4539 Jun  3 18:26 pilotlog.txt
[2025-06-03 18:29:32] -rw-------. 1 boinc boinc   1245210 Jun  3 18:26 log.45006595._014035.job.log.1
[2025-06-03 18:29:32] -rw-------. 1 boinc boinc       357 Jun  3 18:26 output.list
[2025-06-03 18:29:32] -rw-r--r--. 1 boinc boinc       620 Jun  3 18:26 runtime_log
[2025-06-03 18:29:32] -rw-------. 1 boinc boinc   1648640 Jun  3 18:26 result.tar.gz
[2025-06-03 18:29:32] -rw-------. 1 boinc boinc       656 Jun  3 18:26 SufNDmJUTg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmx4gKDmbYIQbm.diag
[2025-06-03 18:29:32] -rw-r--r--. 1 boinc boinc      8659 Jun  3 18:26 runtime_log.err
[2025-06-03 18:29:32] -rw-r--r--. 1 boinc boinc      8192 Jun  3 18:29 boinc_mmap_file
[2025-06-03 18:29:32] -rw-r--r--. 1 boinc boinc        28 Jun  3 18:29 wrapper_checkpoint.txt
[2025-06-03 18:29:32] -rw-r--r--. 1 boinc boinc     20573 Jun  3 18:29 stderr.txt
[2025-06-03 18:29:32] HITS file was successfully produced:
[2025-06-03 18:29:32] -rw-------. 1 boinc boinc 186606136 Jun  3 18:23 shared/HITS.pool.root.1
[2025-06-03 18:29:32]  *** Contents of shared directory: ***
[2025-06-03 18:29:32] total 395632
[2025-06-03 18:29:32] -rw-r--r--. 2 boinc boinc 216336421 Jun  3 13:53 ATLAS.root_0
[2025-06-03 18:29:32] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:53 start_atlas.sh
[2025-06-03 18:29:32] -rw-r--r--. 2 boinc boinc    508882 Jun  3 13:53 input.tar.gz
[2025-06-03 18:29:32] -rw-------. 1 boinc boinc 186606136 Jun  3 18:23 HITS.pool.root.1
[2025-06-03 18:29:32] -rw-------. 1 boinc boinc   1648640 Jun  3 18:26 result.tar.gz
18:29:33 (5447): run_atlas exited; CPU time 52496.013285
18:29:33 (5447): called boinc_finish(0)

</stderr_txt>
]]>

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