Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:51:12 (3943): wrapper (7.7.26015): starting
11:51:12 (3943): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:51:12] Arguments: --nthreads 8
[2025-06-03 11:51:12] Threads: 8
[2025-06-03 11:51:12] Checking for CVMFS
[2025-06-03 11:51:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:51:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:51:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:51:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:51:14] 2.11.2.0 26010 31645 94740 146737 2 14 22062627 25165824 4638 130560 0 15903486 99.788 18702494 2038 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 11:51:14] CVMFS is ok
[2025-06-03 11:51:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:51:14] Checking for apptainer binary...
[2025-06-03 11:51:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:51:14] Running /usr/bin/apptainer --version
[2025-06-03 11:51:14] apptainer version 1.3.2-1.el7
[2025-06-03 11:51:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:21:50] cg-vwn216.simple-grid.lan
[2025-06-03 12:21:50] apptainer works
[2025-06-03 12:21:51] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:21:51] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:21:51] Starting ATLAS job with PandaID=6677419281
[2025-06-03 12:21:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 16:28:16]  *** The last 200 lines of the pilot log: ***
[2025-06-03 16:28:16] 2025-06-03 14:15:27,669 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:28:16] 2025-06-03 14:15:27,669 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:28:16] 2025-06-03 14:15:27,673 | INFO     | fitting pss+swap vs Time
[2025-06-03 16:28:16] 2025-06-03 14:15:27,674 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 16:28:16] 2025-06-03 14:15:27,676 | INFO     | sum of deviations: 60963927405.999985
[2025-06-03 16:28:16] 2025-06-03 14:15:27,676 | INFO     | mean x: 1748953396.0
[2025-06-03 16:28:16] 2025-06-03 14:15:27,676 | INFO     | mean y: 2441898.658986175
[2025-06-03 16:28:16] 2025-06-03 14:15:27,676 | INFO     | -- intersect: -33648929808.820934
[2025-06-03 16:28:16] 2025-06-03 14:15:27,676 | INFO     | intersect: -33648929808.820934
[2025-06-03 16:28:16] 2025-06-03 14:15:27,677 | INFO     | chi2: 7.558515516142156
[2025-06-03 16:28:16] 2025-06-03 14:15:27,677 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 16:28:16] 2025-06-03 14:15:27,686 | INFO     | sum of deviations: 74388717339.5
[2025-06-03 16:28:16] 2025-06-03 14:15:27,686 | INFO     | mean x: 1748953243.5
[2025-06-03 16:28:16] 2025-06-03 14:15:27,686 | INFO     | mean y: 2451268.400943396
[2025-06-03 16:28:16] 2025-06-03 14:15:27,687 | INFO     | -- intersect: -44033656505.51157
[2025-06-03 16:28:16] 2025-06-03 14:15:27,687 | INFO     | intersect: -44033656505.51157
[2025-06-03 16:28:16] 2025-06-03 14:15:27,687 | INFO     | chi2: 6.81961153467897
[2025-06-03 16:28:16] 2025-06-03 14:15:27,687 | INFO     | current chi2=6.81961153467897 (change=9.775781764093292 %)
[2025-06-03 16:28:16] 2025-06-03 14:15:27,687 | INFO     | right removable region: 211
[2025-06-03 16:28:16] 2025-06-03 14:15:27,688 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 16:28:16] 2025-06-03 14:15:27,689 | INFO     | sum of deviations: -14692757893.500006
[2025-06-03 16:28:16] 2025-06-03 14:15:27,689 | INFO     | mean x: 1748953548.5
[2025-06-03 16:28:16] 2025-06-03 14:15:27,690 | INFO     | mean y: 2495767.5896226414
[2025-06-03 16:28:16] 2025-06-03 14:15:27,690 | INFO     | -- intersect: 8700212384.663572
[2025-06-03 16:28:16] 2025-06-03 14:15:27,690 | INFO     | intersect: 8700212384.663572
[2025-06-03 16:28:16] 2025-06-03 14:15:27,690 | INFO     | chi2: 2.5600413876261343
[2025-06-03 16:28:16] 2025-06-03 14:15:27,690 | INFO     | current chi2=2.5600413876261343 (change=66.13036803114521 %)
[2025-06-03 16:28:16] 2025-06-03 14:15:27,691 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 16:28:16] 2025-06-03 14:15:27,692 | INFO     | sum of deviations: -52545385908.99999
[2025-06-03 16:28:16] 2025-06-03 14:15:27,693 | INFO     | mean x: 1748953701.0
[2025-06-03 16:28:16] 2025-06-03 14:15:27,693 | INFO     | mean y: 2523856.09178744
[2025-06-03 16:28:16] 2025-06-03 14:15:27,693 | INFO     | -- intersect: 33416916687.651188
[2025-06-03 16:28:16] 2025-06-03 14:15:27,693 | INFO     | intersect: 33416916687.651188
[2025-06-03 16:28:16] 2025-06-03 14:15:27,693 | INFO     | chi2: 1.0614786664577571
[2025-06-03 16:28:16] 2025-06-03 14:15:27,693 | INFO     | current chi2=1.0614786664577571 (change=58.53665993103178 %)
[2025-06-03 16:28:16] 2025-06-03 14:15:27,694 | INFO     | sum of square deviations: 2555770710.5
[2025-06-03 16:28:16] 2025-06-03 14:15:27,695 | INFO     | sum of deviations: -54930619682.00001
[2025-06-03 16:28:16] 2025-06-03 14:15:27,695 | INFO     | mean x: 1748953853.5
[2025-06-03 16:28:16] 2025-06-03 14:15:27,695 | INFO     | mean y: 2525688.613861386
[2025-06-03 16:28:16] 2025-06-03 14:15:27,696 | INFO     | -- intersect: 37592407509.10859
[2025-06-03 16:28:16] 2025-06-03 14:15:27,696 | INFO     | intersect: 37592407509.10859
[2025-06-03 16:28:16] 2025-06-03 14:15:27,696 | INFO     | chi2: 1.0260839072681756
[2025-06-03 16:28:16] 2025-06-03 14:15:27,696 | INFO     | current chi2=1.0260839072681756 (change=3.3344767359005747 %)
[2025-06-03 16:28:16] 2025-06-03 14:15:27,696 | INFO     | left removable region: 30
[2025-06-03 16:28:16] 2025-06-03 14:15:27,697 | INFO     | sum of square deviations: 1838657730.0
[2025-06-03 16:28:16] 2025-06-03 14:15:27,705 | INFO     | sum of deviations: -21601950435.000004
[2025-06-03 16:28:16] 2025-06-03 14:15:27,705 | INFO     | mean x: 1748954128.0
[2025-06-03 16:28:16] 2025-06-03 14:15:27,706 | INFO     | mean y: 2521386.0552486186
[2025-06-03 16:28:16] 2025-06-03 14:15:27,706 | INFO     | -- intersect: 20550565630.344616
[2025-06-03 16:28:16] 2025-06-03 14:15:27,706 | INFO     | intersect: 20550565630.344616
[2025-06-03 16:28:16] 2025-06-03 14:15:27,706 | INFO     | chi2: 0.14756230343579937
[2025-06-03 16:28:16] 2025-06-03 14:15:27,706 | INFO     | -- intersect: 20550565630.344616
[2025-06-03 16:28:16] 2025-06-03 14:15:27,706 | INFO     | current memory leak: -11.75 B/s (using 181 data points, chi2=0.15)
[2025-06-03 16:28:16] 2025-06-03 14:15:27,707 | INFO     | ..............................
[2025-06-03 16:28:16] 2025-06-03 14:15:27,707 | INFO     | . Timing measurements:
[2025-06-03 16:28:16] 2025-06-03 14:15:27,707 | INFO     | . get job = 0 s
[2025-06-03 16:28:16] 2025-06-03 14:15:27,708 | INFO     | . initial setup = 8 s
[2025-06-03 16:28:16] 2025-06-03 14:15:27,708 | INFO     | . payload setup = 171 s
[2025-06-03 16:28:16] 2025-06-03 14:15:27,708 | INFO     | . stage-in = 0 s
[2025-06-03 16:28:16] 2025-06-03 14:15:27,708 | INFO     | . payload execution = 13373 s
[2025-06-03 16:28:16] 2025-06-03 14:15:27,708 | INFO     | . stage-out = 3 s
[2025-06-03 16:28:16] 2025-06-03 14:15:27,708 | INFO     | . log creation = 1 s
[2025-06-03 16:28:16] 2025-06-03 14:15:27,708 | INFO     | ..............................
[2025-06-03 16:28:16] 2025-06-03 14:15:27,890 | INFO     | 
[2025-06-03 16:28:16] 2025-06-03 14:15:27,891 | INFO     | job summary report
[2025-06-03 16:28:16] 2025-06-03 14:15:27,891 | INFO     | --------------------------------------------------
[2025-06-03 16:28:16] 2025-06-03 14:15:27,891 | INFO     | PanDA job id: 6677419281
[2025-06-03 16:28:16] 2025-06-03 14:15:27,891 | INFO     | task id: 45006595
[2025-06-03 16:28:16] 2025-06-03 14:15:27,891 | INFO     | errors: (none)
[2025-06-03 16:28:16] 2025-06-03 14:15:27,891 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 16:28:16] 2025-06-03 14:15:27,891 | INFO     | pilot state: finished 
[2025-06-03 16:28:16] 2025-06-03 14:15:27,891 | INFO     | transexitcode: 0
[2025-06-03 16:28:16] 2025-06-03 14:15:27,891 | INFO     | exeerrorcode: 0
[2025-06-03 16:28:16] 2025-06-03 14:15:27,892 | INFO     | exeerrordiag: 
[2025-06-03 16:28:16] 2025-06-03 14:15:27,892 | INFO     | exitcode: 0
[2025-06-03 16:28:16] 2025-06-03 14:15:27,892 | INFO     | exitmsg: OK
[2025-06-03 16:28:16] 2025-06-03 14:15:27,892 | INFO     | cpuconsumptiontime: 48464 s
[2025-06-03 16:28:16] 2025-06-03 14:15:27,892 | INFO     | nevents: 400
[2025-06-03 16:28:16] 2025-06-03 14:15:27,892 | INFO     | neventsw: 0
[2025-06-03 16:28:16] 2025-06-03 14:15:27,892 | INFO     | pid: 2636
[2025-06-03 16:28:16] 2025-06-03 14:15:27,892 | INFO     | pgrp: 2636
[2025-06-03 16:28:16] 2025-06-03 14:15:27,892 | INFO     | corecount: 8
[2025-06-03 16:28:16] 2025-06-03 14:15:27,892 | INFO     | event service: False
[2025-06-03 16:28:16] 2025-06-03 14:15:27,892 | INFO     | sizes: {0: 2404905, 1: 2404989, 2: 2405188, 12: 2405188, 23: 2405216, 34: 2405244, 45: 2405400, 55: 2405428, 66: 2405456, 77: 2405484, 88: 2405540, 92: 2406054, 98
[2025-06-03 16:28:16] 2025-06-03 14:15:27,893 | INFO     | --------------------------------------------------
[2025-06-03 16:28:16] 2025-06-03 14:15:27,893 | INFO     | 
[2025-06-03 16:28:16] 2025-06-03 14:15:27,893 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-06-03 16:28:16] 2025-06-03 14:15:28,522 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,522 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,522 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,523 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,523 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,523 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,523 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,523 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,523 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,523 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,523 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,523 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,523 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,523 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,524 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,524 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,524 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,524 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 16:28:16] 2025-06-03 14:15:28,524 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,524 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 16:28:16] 2025-06-03 14:15:28,524 | INFO     | job 6677419281 has completed (purged errors)
[2025-06-03 16:28:16] 2025-06-03 14:15:28,524 | INFO     | overall cleanup function is called
[2025-06-03 16:28:16] 2025-06-03 14:15:28,965 | INFO     | PID=28440 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 16:28:16] 2025-06-03 14:15:28,966 | INFO     | .. there are 9 such processes running
[2025-06-03 16:28:16] 2025-06-03 14:15:29,533 | INFO     | --- collectZombieJob: --- 10, [2636]
[2025-06-03 16:28:16] 2025-06-03 14:15:29,534 | INFO     | zombie collector waiting for pid 2636
[2025-06-03 16:28:16] 2025-06-03 14:15:29,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 16:28:16] 2025-06-03 14:15:29,534 | INFO     | collected zombie processes
[2025-06-03 16:28:16] 2025-06-03 14:15:29,534 | INFO     | will attempt to kill all subprocesses of pid=2636
[2025-06-03 16:28:16] 2025-06-03 14:15:29,626 | INFO     | process IDs to be killed: [2636] (in reverse order)
[2025-06-03 16:28:16] 2025-06-03 14:15:30,559 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 16:28:16] 2025-06-03 14:15:30,560 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 16:28:16] 2025-06-03 14:15:30,563 | INFO     | did not find any defunct processes belonging to 2636
[2025-06-03 16:28:16] 2025-06-03 14:15:30,566 | INFO     | did not find any defunct processes belonging to 2636
[2025-06-03 16:28:16] 2025-06-03 14:15:30,566 | INFO     | ready for new job
[2025-06-03 16:28:16] 2025-06-03 14:15:30,567 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 16:28:16] 2025-06-03 14:15:30,569 | INFO     | **************************************
[2025-06-03 16:28:16] 2025-06-03 14:15:30,569 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 16:28:16] 2025-06-03 14:15:30,569 | INFO     | **************************************
[2025-06-03 16:28:16] 2025-06-03 14:15:30,569 | INFO     | 
[2025-06-03 16:28:16] 2025-06-03 14:15:30,570 | INFO     | pilot is running in a VM
[2025-06-03 16:28:16] 2025-06-03 14:15:30,570 | INFO     | architecture information:
[2025-06-03 16:28:16] 2025-06-03 14:15:30,575 | INFO     | executing command: cat /etc/os-release
[2025-06-03 16:28:16] 2025-06-03 14:15:30,845 | INFO     | cat /etc/os-release:
[2025-06-03 16:28:16] NAME="CentOS Linux"
[2025-06-03 16:28:16] VERSION="7 (Core)"
[2025-06-03 16:28:16] ID="centos"
[2025-06-03 16:28:16] ID_LIKE="rhel fedora"
[2025-06-03 16:28:16] VERSION_ID="7"
[2025-06-03 16:28:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 16:28:16] ANSI_COLOR="0;31"
[2025-06-03 16:28:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 16:28:16] HOME_URL="https://www.centos.org/"
[2025-06-03 16:28:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 16:28:16] 
[2025-06-03 16:28:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 16:28:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 16:28:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 16:28:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 16:28:16] 
[2025-06-03 16:28:16] 2025-06-03 14:15:30,845 | INFO     | **************************************
[2025-06-03 16:28:16] 2025-06-03 14:15:31,349 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-06-03 16:28:16] 2025-06-03 14:15:31,606 | INFO     | sufficient remaining disk space (496553164800 B)
[2025-06-03 16:28:16] 2025-06-03 14:15:31,607 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 16:28:16] 2025-06-03 14:15:31,607 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 16:28:16] 2025-06-03 14:15:31,607 | INFO     | update_server=False
[2025-06-03 16:28:16] 2025-06-03 14:15:31,607 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 16:28:16] 2025-06-03 14:15:31,608 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:28:16] 2025-06-03 14:15:31,609 | INFO     | aborting loop
[2025-06-03 16:28:16] 2025-06-03 14:15:31,613 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 16:28:16] 2025-06-03 14:15:31,614 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 16:28:16] 2025-06-03 14:15:31,614 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 16:28:16] 2025-06-03 14:15:31,614 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 16:28:16] 2025-06-03 14:15:31,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 16:28:16] 2025-06-03 14:15:31,890 | INFO     | all data control threads have been joined
[2025-06-03 16:28:16] 2025-06-03 14:15:32,372 | INFO     | all job control threads have been joined
[2025-06-03 16:28:16] 2025-06-03 14:15:32,614 | INFO     | [job] retrieve thread has finished
[2025-06-03 16:28:16] 2025-06-03 14:15:32,615 | INFO     | [job] job monitor thread has finished
[2025-06-03 16:28:16] 2025-06-03 14:15:32,879 | INFO     | all payload control threads have been joined
[2025-06-03 16:28:16] 2025-06-03 14:15:32,888 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 16:28:16] 2025-06-03 14:15:32,897 | INFO     | [data] control thread has finished
[2025-06-03 16:28:16] 2025-06-03 14:15:32,906 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:28:16] 2025-06-03 14:15:32,951 | INFO     | [job] validate thread has finished
[2025-06-03 16:28:16] 2025-06-03 14:15:33,094 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 16:28:16] 2025-06-03 14:15:33,191 | INFO     | [payload] failed_post thread has finished
[2025-06-03 16:28:16] 2025-06-03 14:15:33,256 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 16:28:16] 2025-06-03 14:15:33,379 | INFO     | [job] control thread has finished
[2025-06-03 16:28:16] 2025-06-03 14:15:33,435 | INFO     | [payload] validate_post thread has finished
[2025-06-03 16:28:16] 2025-06-03 14:15:33,602 | INFO     | [data] copytool_in thread has finished
[2025-06-03 16:28:16] 2025-06-03 14:15:33,622 | INFO     | [data] copytool_out thread has finished
[2025-06-03 16:28:16] 2025-06-03 14:15:33,886 | INFO     | [payload] control thread has finished
[2025-06-03 16:28:16] 2025-06-03 14:15:33,911 | INFO     | [job] queue monitor thread has finished
[2025-06-03 16:28:16] 2025-06-03 14:15:33,957 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 16:28:16] 2025-06-03 14:15:37,967 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 16:28:16] 2025-06-03 14:15:41,675 | INFO     | job.realtimelogging is not enabled
[2025-06-03 16:28:16] 2025-06-03 14:15:42,681 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 16:28:16] 2025-06-03 14:15:44,665 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140664130352960)>', '<ExcThread(monitor, started 140663333058304)>']
[2025-06-03 16:28:16] 2025-06-03 14:15:44,695 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 16:28:16] 2025-06-03 14:15:44,696 | INFO     | [monitor] control thread has ended
[2025-06-03 16:28:16] 2025-06-03 14:15:49,690 | INFO     | all workflow threads have been joined
[2025-06-03 16:28:16] 2025-06-03 14:15:49,691 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 16:28:16] 2025-06-03 14:15:49,691 | INFO     | traces error code: 0
[2025-06-03 16:28:16] 2025-06-03 14:15:49,691 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 16:28:16] 2025-06-03 14:15:50,058 [wrapper] ==== pilot stdout END ====
[2025-06-03 16:28:16] 2025-06-03 14:15:50,148 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 16:28:16] 2025-06-03 14:15:50,221 [wrapper] pilotpid: 28440
[2025-06-03 16:28:16] 2025-06-03 14:15:50,333 [wrapper] Pilot exit status: 0
[2025-06-03 16:28:16] 2025-06-03 14:15:50,778 [wrapper] pandaids: 6677419281
[2025-06-03 16:28:16] 2025-06-03 14:15:51,594 [wrapper] cleanup supervisor_pilot 31302 28441
[2025-06-03 16:28:16] 2025-06-03 14:15:51,684 [wrapper] Test setup, not cleaning
[2025-06-03 16:28:16] 2025-06-03 14:15:51,789 [wrapper] apfmon messages muted
[2025-06-03 16:28:16] 2025-06-03 14:15:51,880 [wrapper] ==== wrapper stdout END ====
[2025-06-03 16:28:16] 2025-06-03 14:15:51,956 [wrapper] ==== wrapper stderr END ====
[2025-06-03 16:28:16]  *** Error codes and diagnostics ***
[2025-06-03 16:28:16]     "exeErrorCode": 0,
[2025-06-03 16:28:16]     "exeErrorDiag": "",
[2025-06-03 16:28:16]     "pilotErrorCode": 0,
[2025-06-03 16:28:16]     "pilotErrorDiag": "",
[2025-06-03 16:28:16]  *** Listing of results directory ***
[2025-06-03 16:28:16] total 388800
[2025-06-03 16:28:16] -rw-r--r--. 1 boinc boinc    495897 Jun  3 01:04 pilot3.tar.gz
[2025-06-03 16:28:16] -rw-r--r--. 1 boinc boinc      5111 Jun  3 01:12 queuedata.json
[2025-06-03 16:28:16] -rwx------. 1 boinc boinc     37140 Jun  3 01:13 runpilot2-wrapper.sh
[2025-06-03 16:28:16] -rw-r--r--. 1 boinc boinc       100 Jun  3 11:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 16:28:16] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 11:51 run_atlas
[2025-06-03 16:28:16] -rw-r--r--. 1 boinc boinc       105 Jun  3 11:51 job.xml
[2025-06-03 16:28:16] -rw-r--r--. 1 boinc boinc      6392 Jun  3 11:51 init_data.xml
[2025-06-03 16:28:16] -rw-r--r--. 2 boinc boinc 213986596 Jun  3 11:51 EVNT.45006593._000563.pool.root.1
[2025-06-03 16:28:16] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:51 start_atlas.sh
[2025-06-03 16:28:16] drwxrwx--x. 2 boinc boinc        68 Jun  3 11:51 shared
[2025-06-03 16:28:16] -rw-r--r--. 2 boinc boinc    508882 Jun  3 11:51 input.tar.gz
[2025-06-03 16:28:16] -rw-r--r--. 1 boinc boinc         0 Jun  3 11:51 boinc_lockfile
[2025-06-03 16:28:16] -rw-r--r--. 1 boinc boinc      2523 Jun  3 12:21 pandaJob.out
[2025-06-03 16:28:16] -rw-------. 1 boinc boinc    985490 Jun  3 12:24 agis_schedconf.cvmfs.json
[2025-06-03 16:28:16] drwx------. 4 boinc boinc      4096 Jun  3 12:24 pilot3
[2025-06-03 16:28:16] -rw-------. 1 boinc boinc 177181306 Jun  3 16:12 HITS.45006595._014075.pool.root.1
[2025-06-03 16:28:16] -rw-r--r--. 1 boinc boinc       531 Jun  3 16:13 boinc_task_state.xml
[2025-06-03 16:28:16] -rw-------. 1 boinc boinc      1018 Jun  3 16:13 memory_monitor_summary.json
[2025-06-03 16:28:16] -rw-------. 1 boinc boinc   1603667 Jun  3 16:13 agis_ddmendpoints.agis.ALL.json
[2025-06-03 16:28:16] -rw-------. 1 boinc boinc    393662 Jun  3 16:13 log.45006595._014075.job.log.tgz.1
[2025-06-03 16:28:16] -rw-------. 1 boinc boinc        95 Jun  3 16:15 pilot_heartbeat.json
[2025-06-03 16:28:16] -rw-------. 1 boinc boinc      7696 Jun  3 16:15 heartbeat.json
[2025-06-03 16:28:16] -rw-------. 1 boinc boinc      4612 Jun  3 16:15 pilotlog.txt
[2025-06-03 16:28:16] -rw-------. 1 boinc boinc   1179047 Jun  3 16:15 log.45006595._014075.job.log.1
[2025-06-03 16:28:16] -rw-------. 1 boinc boinc       357 Jun  3 16:15 output.list
[2025-06-03 16:28:16] -rw-r--r--. 1 boinc boinc       620 Jun  3 16:15 runtime_log
[2025-06-03 16:28:16] -rw-------. 1 boinc boinc   1587200 Jun  3 16:15 result.tar.gz
[2025-06-03 16:28:16] -rw-------. 1 boinc boinc       656 Jun  3 16:15 SvnMDmmWTg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmD6gKDm5F5Jxm.diag
[2025-06-03 16:28:16] -rw-r--r--. 1 boinc boinc      8673 Jun  3 16:15 runtime_log.err
[2025-06-03 16:28:16] -rw-r--r--. 1 boinc boinc      8192 Jun  3 16:28 boinc_mmap_file
[2025-06-03 16:28:16] -rw-r--r--. 1 boinc boinc        28 Jun  3 16:28 wrapper_checkpoint.txt
[2025-06-03 16:28:16] -rw-r--r--. 1 boinc boinc     20617 Jun  3 16:28 stderr.txt
[2025-06-03 16:28:16] HITS file was successfully produced:
[2025-06-03 16:28:16] -rw-------. 1 boinc boinc 177181306 Jun  3 16:12 shared/HITS.pool.root.1
[2025-06-03 16:28:16]  *** Contents of shared directory: ***
[2025-06-03 16:28:16] total 384072
[2025-06-03 16:28:16] -rw-r--r--. 2 boinc boinc 213986596 Jun  3 11:51 ATLAS.root_0
[2025-06-03 16:28:16] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:51 start_atlas.sh
[2025-06-03 16:28:16] -rw-r--r--. 2 boinc boinc    508882 Jun  3 11:51 input.tar.gz
[2025-06-03 16:28:16] -rw-------. 1 boinc boinc 177181306 Jun  3 16:12 HITS.pool.root.1
[2025-06-03 16:28:16] -rw-------. 1 boinc boinc   1587200 Jun  3 16:15 result.tar.gz
16:28:18 (3943): run_atlas exited; CPU time 48645.547652
16:28:18 (3943): called boinc_finish(0)

</stderr_txt>
]]>

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