Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:22:22 (1828): wrapper (7.7.26015): starting
17:22:22 (1828): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:22:22] Arguments: --nthreads 8
[2025-06-03 17:22:22] Threads: 8
[2025-06-03 17:22:22] Checking for CVMFS
[2025-06-03 17:22:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:22:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:22:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:22:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:22:23] 2.11.2.0 408 31942 98508 146746 3 113 21108889 25165825 3985 130560 0 15719736 99.801 17702205 1949 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 17:22:23] CVMFS is ok
[2025-06-03 17:22:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:22:23] Checking for apptainer binary...
[2025-06-03 17:22:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:22:23] Running /usr/bin/apptainer --version
[2025-06-03 17:22:23] apptainer version 1.3.2-1.el7
[2025-06-03 17:22:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:22:26] cg-vwn429.simple-grid.lan
[2025-06-03 17:22:26] apptainer works
[2025-06-03 17:22:26] Set ATHENA_PROC_NUMBER=8
[2025-06-03 17:22:26] Set ATHENA_CORE_NUMBER=8
[2025-06-03 17:22:26] Starting ATLAS job with PandaID=6677418932
[2025-06-03 17:22:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:30:13]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:30:13] 2025-06-03 19:12:40,998 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:30:13] 2025-06-03 19:12:40,998 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:30:13] 2025-06-03 19:12:40,999 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:30:13] 2025-06-03 19:12:41,004 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:30:13] 2025-06-03 19:12:41,005 | INFO     | sum of square deviations: 3531973200.0
[2025-06-03 21:30:13] 2025-06-03 19:12:41,007 | INFO     | sum of deviations: -50406386870.99999
[2025-06-03 21:30:13] 2025-06-03 19:12:41,007 | INFO     | mean x: 1748971054.0
[2025-06-03 21:30:13] 2025-06-03 19:12:41,008 | INFO     | mean y: 2537737.92
[2025-06-03 21:30:13] 2025-06-03 19:12:41,008 | INFO     | -- intersect: 24962894621.178516
[2025-06-03 21:30:13] 2025-06-03 19:12:41,008 | INFO     | intersect: 24962894621.178516
[2025-06-03 21:30:13] 2025-06-03 19:12:41,008 | INFO     | chi2: 2.839294859228258
[2025-06-03 21:30:13] 2025-06-03 19:12:41,009 | INFO     | sum of square deviations: 3301699115.0
[2025-06-03 21:30:13] 2025-06-03 19:12:41,011 | INFO     | sum of deviations: -32941421482.999996
[2025-06-03 21:30:13] 2025-06-03 19:12:41,011 | INFO     | mean x: 1748970901.5
[2025-06-03 21:30:13] 2025-06-03 19:12:41,012 | INFO     | mean y: 2549115.8363636364
[2025-06-03 21:30:13] 2025-06-03 19:12:41,012 | INFO     | -- intersect: 17452227484.791546
[2025-06-03 21:30:13] 2025-06-03 19:12:41,012 | INFO     | intersect: 17452227484.791546
[2025-06-03 21:30:13] 2025-06-03 19:12:41,012 | INFO     | chi2: 1.9716930021310408
[2025-06-03 21:30:13] 2025-06-03 19:12:41,012 | INFO     | current chi2=1.9716930021310408 (change=30.556948119612983 %)
[2025-06-03 21:30:13] 2025-06-03 19:12:41,013 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 21:30:13] 2025-06-03 19:12:41,015 | INFO     | sum of deviations: -31517836911.0
[2025-06-03 21:30:13] 2025-06-03 19:12:41,015 | INFO     | mean x: 1748970749.0
[2025-06-03 21:30:13] 2025-06-03 19:12:41,015 | INFO     | mean y: 2550102.823255814
[2025-06-03 21:30:13] 2025-06-03 19:12:41,015 | INFO     | -- intersect: 17890251711.627956
[2025-06-03 21:30:13] 2025-06-03 19:12:41,015 | INFO     | intersect: 17890251711.627956
[2025-06-03 21:30:13] 2025-06-03 19:12:41,015 | INFO     | chi2: 1.969730781147401
[2025-06-03 21:30:13] 2025-06-03 19:12:41,015 | INFO     | current chi2=1.969730781147401 (change=0.09951959973074143 %)
[2025-06-03 21:30:13] 2025-06-03 19:12:41,016 | INFO     | right removable region: 214
[2025-06-03 21:30:13] 2025-06-03 19:12:41,016 | INFO     | sum of square deviations: 3301699115.0
[2025-06-03 21:30:13] 2025-06-03 19:12:41,018 | INFO     | sum of deviations: -90835739707.0
[2025-06-03 21:30:13] 2025-06-03 19:12:41,018 | INFO     | mean x: 1748971206.5
[2025-06-03 21:30:13] 2025-06-03 19:12:41,018 | INFO     | mean y: 2564294.5
[2025-06-03 21:30:13] 2025-06-03 19:12:41,018 | INFO     | -- intersect: 48119938935.60861
[2025-06-03 21:30:13] 2025-06-03 19:12:41,018 | INFO     | intersect: 48119938935.60861
[2025-06-03 21:30:13] 2025-06-03 19:12:41,019 | INFO     | chi2: 1.1354894909319808
[2025-06-03 21:30:13] 2025-06-03 19:12:41,020 | INFO     | current chi2=1.1354894909319808 (change=60.00804610900414 %)
[2025-06-03 21:30:13] 2025-06-03 19:12:41,020 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 21:30:13] 2025-06-03 19:12:41,022 | INFO     | sum of deviations: -90114959010.0
[2025-06-03 21:30:13] 2025-06-03 19:12:41,022 | INFO     | mean x: 1748971359.0
[2025-06-03 21:30:13] 2025-06-03 19:12:41,022 | INFO     | mean y: 2563757.8325581397
[2025-06-03 21:30:13] 2025-06-03 19:12:41,022 | INFO     | -- intersect: 51146621137.86681
[2025-06-03 21:30:13] 2025-06-03 19:12:41,022 | INFO     | intersect: 51146621137.86681
[2025-06-03 21:30:13] 2025-06-03 19:12:41,023 | INFO     | chi2: 1.1101056988244429
[2025-06-03 21:30:13] 2025-06-03 19:12:41,023 | INFO     | current chi2=1.1101056988244429 (change=2.2354933542100484 %)
[2025-06-03 21:30:13] 2025-06-03 19:12:41,023 | INFO     | left removable region: 20
[2025-06-03 21:30:13] 2025-06-03 19:12:41,024 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 21:30:13] 2025-06-03 19:12:41,025 | INFO     | sum of deviations: -59128714193.5
[2025-06-03 21:30:13] 2025-06-03 19:12:41,026 | INFO     | mean x: 1748971328.5
[2025-06-03 21:30:13] 2025-06-03 19:12:41,026 | INFO     | mean y: 2569420.4484536084
[2025-06-03 21:30:13] 2025-06-03 19:12:41,026 | INFO     | -- intersect: 45680776675.866066
[2025-06-03 21:30:13] 2025-06-03 19:12:41,026 | INFO     | intersect: 45680776675.866066
[2025-06-03 21:30:13] 2025-06-03 19:12:41,026 | INFO     | chi2: 0.2001245668896961
[2025-06-03 21:30:13] 2025-06-03 19:12:41,026 | INFO     | -- intersect: 45680776675.866066
[2025-06-03 21:30:13] 2025-06-03 19:12:41,027 | INFO     | current memory leak: -26.12 B/s (using 194 data points, chi2=0.20)
[2025-06-03 21:30:13] 2025-06-03 19:12:41,028 | INFO     | ..............................
[2025-06-03 21:30:13] 2025-06-03 19:12:41,028 | INFO     | . Timing measurements:
[2025-06-03 21:30:13] 2025-06-03 19:12:41,028 | INFO     | . get job = 0 s
[2025-06-03 21:30:13] 2025-06-03 19:12:41,028 | INFO     | . initial setup = 2 s
[2025-06-03 21:30:13] 2025-06-03 19:12:41,028 | INFO     | . payload setup = 15 s
[2025-06-03 21:30:13] 2025-06-03 19:12:41,028 | INFO     | . stage-in = 0 s
[2025-06-03 21:30:13] 2025-06-03 19:12:41,028 | INFO     | . payload execution = 13714 s
[2025-06-03 21:30:13] 2025-06-03 19:12:41,028 | INFO     | . stage-out = 2 s
[2025-06-03 21:30:13] 2025-06-03 19:12:41,029 | INFO     | . log creation = 0 s
[2025-06-03 21:30:13] 2025-06-03 19:12:41,029 | INFO     | ..............................
[2025-06-03 21:30:13] 2025-06-03 19:12:41,433 | INFO     | 
[2025-06-03 21:30:13] 2025-06-03 19:12:41,433 | INFO     | job summary report
[2025-06-03 21:30:13] 2025-06-03 19:12:41,433 | INFO     | --------------------------------------------------
[2025-06-03 21:30:13] 2025-06-03 19:12:41,434 | INFO     | PanDA job id: 6677418932
[2025-06-03 21:30:13] 2025-06-03 19:12:41,434 | INFO     | task id: 45006595
[2025-06-03 21:30:13] 2025-06-03 19:12:41,434 | INFO     | errors: (none)
[2025-06-03 21:30:13] 2025-06-03 19:12:41,434 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:30:13] 2025-06-03 19:12:41,434 | INFO     | pilot state: finished 
[2025-06-03 21:30:13] 2025-06-03 19:12:41,434 | INFO     | transexitcode: 0
[2025-06-03 21:30:13] 2025-06-03 19:12:41,434 | INFO     | exeerrorcode: 0
[2025-06-03 21:30:13] 2025-06-03 19:12:41,434 | INFO     | exeerrordiag: 
[2025-06-03 21:30:13] 2025-06-03 19:12:41,434 | INFO     | exitcode: 0
[2025-06-03 21:30:13] 2025-06-03 19:12:41,434 | INFO     | exitmsg: OK
[2025-06-03 21:30:13] 2025-06-03 19:12:41,435 | INFO     | cpuconsumptiontime: 52030 s
[2025-06-03 21:30:13] 2025-06-03 19:12:41,435 | INFO     | nevents: 400
[2025-06-03 21:30:13] 2025-06-03 19:12:41,435 | INFO     | neventsw: 0
[2025-06-03 21:30:13] 2025-06-03 19:12:41,435 | INFO     | pid: 16120
[2025-06-03 21:30:13] 2025-06-03 19:12:41,435 | INFO     | pgrp: 16120
[2025-06-03 21:30:13] 2025-06-03 19:12:41,435 | INFO     | corecount: 8
[2025-06-03 21:30:13] 2025-06-03 19:12:41,435 | INFO     | event service: False
[2025-06-03 21:30:13] 2025-06-03 19:12:41,435 | INFO     | sizes: {0: 2405012, 1: 2405211, 2: 2405211, 11: 2405445, 12: 2405473, 13734: 2435356, 13738: 2444299, 13741: 2444355, 13771: 2444525}
[2025-06-03 21:30:13] 2025-06-03 19:12:41,435 | INFO     | --------------------------------------------------
[2025-06-03 21:30:13] 2025-06-03 19:12:41,435 | INFO     | 
[2025-06-03 21:30:13] 2025-06-03 19:12:41,436 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-03 21:30:13] 2025-06-03 19:12:41,472 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,472 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,472 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,472 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,472 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,472 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,472 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,472 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,473 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:30:13] 2025-06-03 19:12:41,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,473 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:30:13] 2025-06-03 19:12:41,474 | INFO     | job 6677418932 has completed (purged errors)
[2025-06-03 21:30:13] 2025-06-03 19:12:41,474 | INFO     | overall cleanup function is called
[2025-06-03 21:30:13] 2025-06-03 19:12:42,482 | INFO     | --- collectZombieJob: --- 10, [16120]
[2025-06-03 21:30:13] 2025-06-03 19:12:42,482 | INFO     | zombie collector waiting for pid 16120
[2025-06-03 21:30:13] 2025-06-03 19:12:42,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:30:13] 2025-06-03 19:12:42,483 | INFO     | collected zombie processes
[2025-06-03 21:30:13] 2025-06-03 19:12:42,483 | INFO     | will attempt to kill all subprocesses of pid=16120
[2025-06-03 21:30:13] 2025-06-03 19:12:42,617 | INFO     | process IDs to be killed: [16120] (in reverse order)
[2025-06-03 21:30:13] 2025-06-03 19:12:42,722 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:30:13] 2025-06-03 19:12:42,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:30:13] 2025-06-03 19:12:42,726 | INFO     | did not find any defunct processes belonging to 16120
[2025-06-03 21:30:13] 2025-06-03 19:12:42,729 | INFO     | did not find any defunct processes belonging to 16120
[2025-06-03 21:30:13] 2025-06-03 19:12:42,729 | INFO     | ready for new job
[2025-06-03 21:30:13] 2025-06-03 19:12:42,730 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:30:13] 2025-06-03 19:12:42,731 | INFO     | **************************************
[2025-06-03 21:30:13] 2025-06-03 19:12:42,732 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:30:13] 2025-06-03 19:12:42,732 | INFO     | **************************************
[2025-06-03 21:30:13] 2025-06-03 19:12:42,732 | INFO     | 
[2025-06-03 21:30:13] 2025-06-03 19:12:42,732 | INFO     | pilot is running in a VM
[2025-06-03 21:30:13] 2025-06-03 19:12:42,732 | INFO     | architecture information:
[2025-06-03 21:30:13] 2025-06-03 19:12:42,733 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:30:13] 2025-06-03 19:12:42,760 | INFO     | cat /etc/os-release:
[2025-06-03 21:30:13] NAME="CentOS Linux"
[2025-06-03 21:30:13] VERSION="7 (Core)"
[2025-06-03 21:30:13] ID="centos"
[2025-06-03 21:30:13] ID_LIKE="rhel fedora"
[2025-06-03 21:30:13] VERSION_ID="7"
[2025-06-03 21:30:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:30:13] ANSI_COLOR="0;31"
[2025-06-03 21:30:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:30:13] HOME_URL="https://www.centos.org/"
[2025-06-03 21:30:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:30:13] 
[2025-06-03 21:30:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:30:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:30:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:30:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:30:13] 
[2025-06-03 21:30:13] 2025-06-03 19:12:42,760 | INFO     | **************************************
[2025-06-03 21:30:13] 2025-06-03 19:12:43,232 | INFO     | PID=5586 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 21:30:13] 2025-06-03 19:12:43,232 | INFO     | .. there are 9 such processes running
[2025-06-03 21:30:13] 2025-06-03 19:12:43,263 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-03 21:30:13] 2025-06-03 19:12:43,312 | INFO     | sufficient remaining disk space (497055432704 B)
[2025-06-03 21:30:13] 2025-06-03 19:12:43,312 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:30:13] 2025-06-03 19:12:43,312 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:30:13] 2025-06-03 19:12:43,312 | INFO     | update_server=False
[2025-06-03 21:30:13] 2025-06-03 19:12:43,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:30:13] 2025-06-03 19:12:43,313 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 21:30:13] 2025-06-03 19:12:43,313 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:30:13] 2025-06-03 19:12:43,314 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:30:13] 2025-06-03 19:12:43,314 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:30:13] 2025-06-03 19:12:43,320 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:30:13] 2025-06-03 19:12:43,320 | INFO     | aborting loop
[2025-06-03 21:30:13] 2025-06-03 19:12:43,501 | INFO     | all payload control threads have been joined
[2025-06-03 21:30:13] 2025-06-03 19:12:43,904 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:30:13] 2025-06-03 19:12:44,315 | INFO     | all data control threads have been joined
[2025-06-03 21:30:13] 2025-06-03 19:12:44,318 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:30:13] 2025-06-03 19:12:44,327 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:30:13] 2025-06-03 19:12:44,392 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:30:13] 2025-06-03 19:12:44,507 | INFO     | [payload] control thread has finished
[2025-06-03 21:30:13] 2025-06-03 19:12:44,543 | INFO     | all job control threads have been joined
[2025-06-03 21:30:13] 2025-06-03 19:12:44,648 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:30:13] 2025-06-03 19:12:44,863 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:30:13] 2025-06-03 19:12:45,134 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:30:13] 2025-06-03 19:12:45,173 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:30:13] 2025-06-03 19:12:45,321 | INFO     | [data] control thread has finished
[2025-06-03 21:30:13] 2025-06-03 19:12:45,445 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:30:13] 2025-06-03 19:12:45,504 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:30:13] 2025-06-03 19:12:45,549 | INFO     | [job] control thread has finished
[2025-06-03 21:30:13] 2025-06-03 19:12:45,746 | INFO     | [job] validate thread has finished
[2025-06-03 21:30:13] 2025-06-03 19:12:45,833 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:30:13] 2025-06-03 19:12:45,911 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:30:13] 2025-06-03 19:12:46,180 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:30:13] 2025-06-03 19:12:47,186 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:30:13] 2025-06-03 19:12:48,657 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:30:13] 2025-06-03 19:12:48,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140355661584192)>', '<ExcThread(monitor, started 140355085260544)>']
[2025-06-03 21:30:13] 2025-06-03 19:12:49,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:30:13] 2025-06-03 19:12:49,352 | INFO     | [monitor] control thread has ended
[2025-06-03 21:30:13] 2025-06-03 19:12:53,798 | INFO     | all workflow threads have been joined
[2025-06-03 21:30:13] 2025-06-03 19:12:53,798 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:30:13] 2025-06-03 19:12:53,799 | INFO     | traces error code: 0
[2025-06-03 21:30:13] 2025-06-03 19:12:53,799 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:30:13] 2025-06-03 19:12:54,076 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:30:13] 2025-06-03 19:12:54,088 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:30:13] 2025-06-03 19:12:54,146 [wrapper] pilotpid: 5586
[2025-06-03 21:30:13] 2025-06-03 19:12:54,166 [wrapper] Pilot exit status: 0
[2025-06-03 21:30:13] 2025-06-03 19:12:54,233 [wrapper] pandaids: 6677418932
[2025-06-03 21:30:13] 2025-06-03 19:12:54,283 [wrapper] cleanup supervisor_pilot 10842 5587
[2025-06-03 21:30:13] 2025-06-03 19:12:54,303 [wrapper] Test setup, not cleaning
[2025-06-03 21:30:13] 2025-06-03 19:12:54,314 [wrapper] apfmon messages muted
[2025-06-03 21:30:13] 2025-06-03 19:12:54,336 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:30:13] 2025-06-03 19:12:54,352 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:30:13]  *** Error codes and diagnostics ***
[2025-06-03 21:30:13]     "exeErrorCode": 0,
[2025-06-03 21:30:13]     "exeErrorDiag": "",
[2025-06-03 21:30:13]     "pilotErrorCode": 0,
[2025-06-03 21:30:13]     "pilotErrorDiag": "",
[2025-06-03 21:30:13]  *** Listing of results directory ***
[2025-06-03 21:30:13] total 396728
[2025-06-03 21:30:13] -rw-r--r--. 1 boinc boinc    495897 Jun  3 00:49 pilot3.tar.gz
[2025-06-03 21:30:13] -rw-r--r--. 1 boinc boinc      5111 Jun  3 00:56 queuedata.json
[2025-06-03 21:30:13] -rwx------. 1 boinc boinc     37140 Jun  3 00:56 runpilot2-wrapper.sh
[2025-06-03 21:30:13] -rw-r--r--. 1 boinc boinc       100 Jun  3 17:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:30:13] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 17:22 run_atlas
[2025-06-03 21:30:13] -rw-r--r--. 1 boinc boinc       105 Jun  3 17:22 job.xml
[2025-06-03 21:30:13] -rw-r--r--. 1 boinc boinc      6393 Jun  3 17:22 init_data.xml
[2025-06-03 21:30:13] -rw-r--r--. 2 boinc boinc 215390311 Jun  3 17:22 EVNT.45006593._000550.pool.root.1
[2025-06-03 21:30:13] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:22 start_atlas.sh
[2025-06-03 21:30:13] drwxrwx--x. 2 boinc boinc        68 Jun  3 17:22 shared
[2025-06-03 21:30:13] -rw-r--r--. 2 boinc boinc    508877 Jun  3 17:22 input.tar.gz
[2025-06-03 21:30:13] -rw-r--r--. 1 boinc boinc         0 Jun  3 17:22 boinc_lockfile
[2025-06-03 21:30:13] -rw-r--r--. 1 boinc boinc      2524 Jun  3 17:22 pandaJob.out
[2025-06-03 21:30:13] -rw-------. 1 boinc boinc    982716 Jun  3 17:22 agis_schedconf.cvmfs.json
[2025-06-03 21:30:13] drwx------. 4 boinc boinc      4096 Jun  3 17:22 pilot3
[2025-06-03 21:30:13] -rw-------. 1 boinc boinc 183905753 Jun  3 21:11 HITS.45006595._013736.pool.root.1
[2025-06-03 21:30:13] -rw-r--r--. 1 boinc boinc       531 Jun  3 21:11 boinc_task_state.xml
[2025-06-03 21:30:13] -rw-------. 1 boinc boinc      1020 Jun  3 21:12 memory_monitor_summary.json
[2025-06-03 21:30:13] -rw-------. 1 boinc boinc   1603667 Jun  3 21:12 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:30:13] -rw-------. 1 boinc boinc    378941 Jun  3 21:12 log.45006595._013736.job.log.tgz.1
[2025-06-03 21:30:13] -rw-------. 1 boinc boinc        95 Jun  3 21:12 pilot_heartbeat.json
[2025-06-03 21:30:13] -rw-------. 1 boinc boinc      7691 Jun  3 21:12 heartbeat.json
[2025-06-03 21:30:13] -rw-------. 1 boinc boinc      4931 Jun  3 21:12 pilotlog.txt
[2025-06-03 21:30:13] -rw-------. 1 boinc boinc   1191835 Jun  3 21:12 log.45006595._013736.job.log.1
[2025-06-03 21:30:13] -rw-------. 1 boinc boinc       357 Jun  3 21:12 output.list
[2025-06-03 21:30:13] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:12 runtime_log
[2025-06-03 21:30:13] -rw-------. 1 boinc boinc   1587200 Jun  3 21:12 result.tar.gz
[2025-06-03 21:30:13] -rw-r--r--. 1 boinc boinc      8673 Jun  3 21:12 runtime_log.err
[2025-06-03 21:30:13] -rw-------. 1 boinc boinc       656 Jun  3 21:12 kyKODmKGTg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmv2gKDmxxu2km.diag
[2025-06-03 21:30:13] -rw-r--r--. 1 boinc boinc      8192 Jun  3 21:30 boinc_mmap_file
[2025-06-03 21:30:13] -rw-r--r--. 1 boinc boinc        28 Jun  3 21:30 wrapper_checkpoint.txt
[2025-06-03 21:30:13] -rw-r--r--. 1 boinc boinc     20573 Jun  3 21:30 stderr.txt
[2025-06-03 21:30:13] HITS file was successfully produced:
[2025-06-03 21:30:13] -rw-------. 1 boinc boinc 183905753 Jun  3 21:11 shared/HITS.pool.root.1
[2025-06-03 21:30:13]  *** Contents of shared directory: ***
[2025-06-03 21:30:13] total 392008
[2025-06-03 21:30:13] -rw-r--r--. 2 boinc boinc 215390311 Jun  3 17:22 ATLAS.root_0
[2025-06-03 21:30:13] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:22 start_atlas.sh
[2025-06-03 21:30:13] -rw-r--r--. 2 boinc boinc    508877 Jun  3 17:22 input.tar.gz
[2025-06-03 21:30:13] -rw-------. 1 boinc boinc 183905753 Jun  3 21:11 HITS.pool.root.1
[2025-06-03 21:30:13] -rw-------. 1 boinc boinc   1587200 Jun  3 21:12 result.tar.gz
21:30:15 (1828): run_atlas exited; CPU time 52206.756762
21:30:15 (1828): called boinc_finish(0)

</stderr_txt>
]]>

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