Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:50:29 (1979880): wrapper (7.7.26015): starting
07:50:29 (1979880): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 07:50:29] Arguments: --nthreads 4
[2025-06-05 07:50:29] Threads: 4
[2025-06-05 07:50:29] Checking for CVMFS
[2025-06-05 07:50:29] No cvmfs_config command found, will try listing directly
[2025-06-05 07:50:29] CVMFS is ok
[2025-06-05 07:50:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 07:50:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 07:50:29] Further information can be found at the LHC@home message board.
[2025-06-05 07:50:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 07:50:29] Checking for apptainer binary...
[2025-06-05 07:50:29] which: no apptainer in ((null))
[2025-06-05 07:50:29] apptainer is not installed, using version from CVMFS
[2025-06-05 07:50:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 07:50:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-06-05 07:50:29] apptainer works
[2025-06-05 07:50:29] Set ATHENA_PROC_NUMBER=4
[2025-06-05 07:50:29] Set ATHENA_CORE_NUMBER=4
[2025-06-05 07:50:29] Starting ATLAS job with PandaID=6677400427
[2025-06-05 07:50:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 10:32:53]  *** The last 200 lines of the pilot log: ***
[2025-06-05 10:32:53] 2025-06-05 08:32:33,955 | INFO     | PID=1983545 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 10:32:53] 2025-06-05 08:32:33,955 | INFO     | .. there are 7 such processes running
[2025-06-05 10:32:53] 2025-06-05 08:32:34,956 | INFO     | 9716s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 10:32:53] 2025-06-05 08:32:35,667 | INFO     | monitor loop #711: job 0:6677400427 is in state 'finished'
[2025-06-05 10:32:53] 2025-06-05 08:32:35,667 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 10:32:53] 2025-06-05 08:32:38,018 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 10:32:53] 2025-06-05 08:32:38,019 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6677400427/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 10:32:53] 2025-06-05 08:32:38,020 | INFO     | extracted standard info from prmon json
[2025-06-05 10:32:53] 2025-06-05 08:32:38,020 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 10:32:53] 2025-06-05 08:32:38,020 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 10:32:53] 2025-06-05 08:32:38,021 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 10:32:53] 2025-06-05 08:32:38,021 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 10:32:53] 2025-06-05 08:32:38,025 | INFO     | fitting pss+swap vs Time
[2025-06-05 10:32:53] 2025-06-05 08:32:38,025 | INFO     | sum of square deviations: 1246386160.0
[2025-06-05 10:32:53] 2025-06-05 08:32:38,026 | INFO     | sum of deviations: 11934268384.0
[2025-06-05 10:32:53] 2025-06-05 08:32:38,027 | INFO     | mean x: 1749107488.0
[2025-06-05 10:32:53] 2025-06-05 08:32:38,027 | INFO     | mean y: 2315260.371069182
[2025-06-05 10:32:53] 2025-06-05 08:32:38,027 | INFO     | -- intersect: -16745558604.223238
[2025-06-05 10:32:53] 2025-06-05 08:32:38,027 | INFO     | intersect: -16745558604.223238
[2025-06-05 10:32:53] 2025-06-05 08:32:38,027 | INFO     | chi2: 1.6733373123571542
[2025-06-05 10:32:53] 2025-06-05 08:32:38,028 | INFO     | sum of square deviations: 1132458442.5
[2025-06-05 10:32:53] 2025-06-05 08:32:38,029 | INFO     | sum of deviations: 11584610344.999998
[2025-06-05 10:32:53] 2025-06-05 08:32:38,029 | INFO     | mean x: 1749107335.5
[2025-06-05 10:32:53] 2025-06-05 08:32:38,029 | INFO     | mean y: 2314792.922077922
[2025-06-05 10:32:53] 2025-06-05 08:32:38,029 | INFO     | -- intersect: -17890374398.053406
[2025-06-05 10:32:53] 2025-06-05 08:32:38,029 | INFO     | intersect: -17890374398.053406
[2025-06-05 10:32:53] 2025-06-05 08:32:38,029 | INFO     | chi2: 1.6751717055689475
[2025-06-05 10:32:53] 2025-06-05 08:32:38,029 | INFO     | current chi2=1.6751717055689475 (change=-0.10962483166106018 %)
[2025-06-05 10:32:53] 2025-06-05 08:32:38,029 | INFO     | right removable region: 153
[2025-06-05 10:32:53] 2025-06-05 08:32:38,030 | INFO     | sum of square deviations: 1132458442.5
[2025-06-05 10:32:53] 2025-06-05 08:32:38,031 | INFO     | sum of deviations: -12328663792.5
[2025-06-05 10:32:53] 2025-06-05 08:32:38,031 | INFO     | mean x: 1749107640.5
[2025-06-05 10:32:53] 2025-06-05 08:32:38,031 | INFO     | mean y: 2347298.5
[2025-06-05 10:32:53] 2025-06-05 08:32:38,031 | INFO     | -- intersect: 19044246963.27949
[2025-06-05 10:32:53] 2025-06-05 08:32:38,031 | INFO     | intersect: 19044246963.27949
[2025-06-05 10:32:53] 2025-06-05 08:32:38,031 | INFO     | chi2: 0.06688171457134681
[2025-06-05 10:32:53] 2025-06-05 08:32:38,032 | INFO     | current chi2=0.06688171457134681 (change=96.00309429082571 %)
[2025-06-05 10:32:53] 2025-06-05 08:32:38,032 | INFO     | sum of square deviations: 1025693650.0
[2025-06-05 10:32:53] 2025-06-05 08:32:38,033 | INFO     | sum of deviations: -9936549677.0
[2025-06-05 10:32:53] 2025-06-05 08:32:38,033 | INFO     | mean x: 1749107793.0
[2025-06-05 10:32:53] 2025-06-05 08:32:38,033 | INFO     | mean y: 2343851.4295302015
[2025-06-05 10:32:53] 2025-06-05 08:32:38,033 | INFO     | -- intersect: 16947068502.471617
[2025-06-05 10:32:53] 2025-06-05 08:32:38,033 | INFO     | intersect: 16947068502.471617
[2025-06-05 10:32:53] 2025-06-05 08:32:38,034 | INFO     | chi2: 0.06138066329730004
[2025-06-05 10:32:53] 2025-06-05 08:32:38,034 | INFO     | current chi2=0.06138066329730004 (change=8.225045229931215 %)
[2025-06-05 10:32:53] 2025-06-05 08:32:38,034 | INFO     | left removable region: 20
[2025-06-05 10:32:53] 2025-06-05 08:32:38,034 | INFO     | sum of square deviations: 729472282.0
[2025-06-05 10:32:53] 2025-06-05 08:32:38,035 | INFO     | sum of deviations: -2637602363.0000005
[2025-06-05 10:32:53] 2025-06-05 08:32:38,035 | INFO     | mean x: 1749107915.0
[2025-06-05 10:32:53] 2025-06-05 08:32:38,035 | INFO     | mean y: 2332570.5488721803
[2025-06-05 10:32:53] 2025-06-05 08:32:38,035 | INFO     | -- intersect: 6326700587.791786
[2025-06-05 10:32:53] 2025-06-05 08:32:38,035 | INFO     | intersect: 6326700587.791786
[2025-06-05 10:32:53] 2025-06-05 08:32:38,036 | INFO     | chi2: 0.029459124834369927
[2025-06-05 10:32:53] 2025-06-05 08:32:38,036 | INFO     | -- intersect: 6326700587.791786
[2025-06-05 10:32:53] 2025-06-05 08:32:38,036 | INFO     | current memory leak: -3.62 B/s (using 133 data points, chi2=0.03)
[2025-06-05 10:32:53] 2025-06-05 08:32:38,037 | INFO     | ..............................
[2025-06-05 10:32:53] 2025-06-05 08:32:38,037 | INFO     | . Timing measurements:
[2025-06-05 10:32:53] 2025-06-05 08:32:38,037 | INFO     | . get job = 0 s
[2025-06-05 10:32:53] 2025-06-05 08:32:38,037 | INFO     | . initial setup = 1 s
[2025-06-05 10:32:53] 2025-06-05 08:32:38,037 | INFO     | . payload setup = 7 s
[2025-06-05 10:32:53] 2025-06-05 08:32:38,037 | INFO     | . stage-in = 0 s
[2025-06-05 10:32:53] 2025-06-05 08:32:38,037 | INFO     | . payload execution = 9684 s
[2025-06-05 10:32:53] 2025-06-05 08:32:38,037 | INFO     | . stage-out = 0 s
[2025-06-05 10:32:53] 2025-06-05 08:32:38,037 | INFO     | . log creation = 0 s
[2025-06-05 10:32:53] 2025-06-05 08:32:38,037 | INFO     | ..............................
[2025-06-05 10:32:53] 2025-06-05 08:32:38,148 | INFO     | 
[2025-06-05 10:32:53] 2025-06-05 08:32:38,148 | INFO     | job summary report
[2025-06-05 10:32:53] 2025-06-05 08:32:38,148 | INFO     | --------------------------------------------------
[2025-06-05 10:32:53] 2025-06-05 08:32:38,148 | INFO     | PanDA job id: 6677400427
[2025-06-05 10:32:53] 2025-06-05 08:32:38,148 | INFO     | task id: 45006595
[2025-06-05 10:32:53] 2025-06-05 08:32:38,148 | INFO     | errors: (none)
[2025-06-05 10:32:53] 2025-06-05 08:32:38,148 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 10:32:53] 2025-06-05 08:32:38,148 | INFO     | pilot state: finished 
[2025-06-05 10:32:53] 2025-06-05 08:32:38,148 | INFO     | transexitcode: 0
[2025-06-05 10:32:53] 2025-06-05 08:32:38,149 | INFO     | exeerrorcode: 0
[2025-06-05 10:32:53] 2025-06-05 08:32:38,149 | INFO     | exeerrordiag: 
[2025-06-05 10:32:53] 2025-06-05 08:32:38,149 | INFO     | exitcode: 0
[2025-06-05 10:32:53] 2025-06-05 08:32:38,149 | INFO     | exitmsg: OK
[2025-06-05 10:32:53] 2025-06-05 08:32:38,149 | INFO     | cpuconsumptiontime: 37265 s
[2025-06-05 10:32:53] 2025-06-05 08:32:38,149 | INFO     | nevents: 400
[2025-06-05 10:32:53] 2025-06-05 08:32:38,149 | INFO     | neventsw: 0
[2025-06-05 10:32:53] 2025-06-05 08:32:38,149 | INFO     | pid: 1990524
[2025-06-05 10:32:53] 2025-06-05 08:32:38,149 | INFO     | pgrp: 1990524
[2025-06-05 10:32:53] 2025-06-05 08:32:38,149 | INFO     | corecount: 4
[2025-06-05 10:32:53] 2025-06-05 08:32:38,149 | INFO     | event service: False
[2025-06-05 10:32:53] 2025-06-05 08:32:38,149 | INFO     | sizes: {0: 2397180, 1: 2397379, 6: 2397585, 12: 2397613, 9695: 2425961, 9696: 2434924, 9697: 2435108, 9702: 2435278}
[2025-06-05 10:32:53] 2025-06-05 08:32:38,149 | INFO     | --------------------------------------------------
[2025-06-05 10:32:53] 2025-06-05 08:32:38,150 | INFO     | 
[2025-06-05 10:32:53] 2025-06-05 08:32:38,150 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-06-05 10:32:53] 2025-06-05 08:32:38,173 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,173 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,173 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,173 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,173 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,173 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,174 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,174 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,174 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,174 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,174 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,174 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,174 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,174 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,174 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,174 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,174 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 10:32:53] 2025-06-05 08:32:38,175 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,175 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 10:32:53] 2025-06-05 08:32:38,175 | INFO     | job 6677400427 has completed (purged errors)
[2025-06-05 10:32:53] 2025-06-05 08:32:38,175 | INFO     | overall cleanup function is called
[2025-06-05 10:32:53] 2025-06-05 08:32:39,182 | INFO     | --- collectZombieJob: --- 10, [1990524]
[2025-06-05 10:32:53] 2025-06-05 08:32:39,183 | INFO     | zombie collector waiting for pid 1990524
[2025-06-05 10:32:53] 2025-06-05 08:32:39,183 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 10:32:53] 2025-06-05 08:32:39,183 | INFO     | collected zombie processes
[2025-06-05 10:32:53] 2025-06-05 08:32:39,183 | INFO     | will attempt to kill all subprocesses of pid=1990524
[2025-06-05 10:32:53] 2025-06-05 08:32:39,540 | INFO     | process IDs to be killed: [1990524] (in reverse order)
[2025-06-05 10:32:53] 2025-06-05 08:32:39,652 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 10:32:53] 2025-06-05 08:32:39,652 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 10:32:53] 2025-06-05 08:32:39,664 | INFO     | did not find any defunct processes belonging to 1990524
[2025-06-05 10:32:53] 2025-06-05 08:32:39,675 | INFO     | did not find any defunct processes belonging to 1990524
[2025-06-05 10:32:53] 2025-06-05 08:32:39,676 | INFO     | ready for new job
[2025-06-05 10:32:53] 2025-06-05 08:32:39,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 10:32:53] 2025-06-05 08:32:39,678 | INFO     | **************************************
[2025-06-05 10:32:53] 2025-06-05 08:32:39,678 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 10:32:53] 2025-06-05 08:32:39,678 | INFO     | **************************************
[2025-06-05 10:32:53] 2025-06-05 08:32:39,678 | INFO     | 
[2025-06-05 10:32:53] 2025-06-05 08:32:39,682 | INFO     | architecture information:
[2025-06-05 10:32:53] 2025-06-05 08:32:39,682 | INFO     | executing command: cat /etc/os-release
[2025-06-05 10:32:53] 2025-06-05 08:32:39,699 | INFO     | cat /etc/os-release:
[2025-06-05 10:32:53] NAME="CentOS Linux"
[2025-06-05 10:32:53] VERSION="7 (Core)"
[2025-06-05 10:32:53] ID="centos"
[2025-06-05 10:32:53] ID_LIKE="rhel fedora"
[2025-06-05 10:32:53] VERSION_ID="7"
[2025-06-05 10:32:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 10:32:53] ANSI_COLOR="0;31"
[2025-06-05 10:32:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 10:32:53] HOME_URL="https://www.centos.org/"
[2025-06-05 10:32:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 10:32:53] 
[2025-06-05 10:32:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 10:32:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 10:32:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 10:32:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 10:32:53] 
[2025-06-05 10:32:53] 2025-06-05 08:32:39,700 | INFO     | **************************************
[2025-06-05 10:32:53] 2025-06-05 08:32:40,203 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-06-05 10:32:53] 2025-06-05 08:32:40,220 | INFO     | sufficient remaining disk space (669353246720 B)
[2025-06-05 10:32:53] 2025-06-05 08:32:40,220 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 10:32:53] 2025-06-05 08:32:40,220 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 10:32:53] 2025-06-05 08:32:40,221 | INFO     | update_server=False
[2025-06-05 10:32:53] 2025-06-05 08:32:40,221 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 10:32:53] 2025-06-05 08:32:40,221 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 10:32:53] 2025-06-05 08:32:40,221 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 10:32:53] 2025-06-05 08:32:40,222 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 10:32:53] 2025-06-05 08:32:40,222 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 10:32:53] 2025-06-05 08:32:40,222 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 10:32:53] 2025-06-05 08:32:40,636 | INFO     | all job control threads have been joined
[2025-06-05 10:32:53] 2025-06-05 08:32:40,671 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 10:32:53] 2025-06-05 08:32:40,672 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 10:32:53] 2025-06-05 08:32:40,673 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 10:32:53] 2025-06-05 08:32:40,673 | INFO     | will abort loop
[2025-06-05 10:32:53] 2025-06-05 08:32:40,676 | INFO     | all payload control threads have been joined
[2025-06-05 10:32:53] 2025-06-05 08:32:40,781 | INFO     | all data control threads have been joined
[2025-06-05 10:32:53] 2025-06-05 08:32:41,226 | INFO     | [job] retrieve thread has finished
[2025-06-05 10:32:53] 2025-06-05 08:32:41,414 | INFO     | [payload] failed_post thread has finished
[2025-06-05 10:32:53] 2025-06-05 08:32:41,557 | INFO     | [job] validate thread has finished
[2025-06-05 10:32:53] 2025-06-05 08:32:41,642 | INFO     | [job] control thread has finished
[2025-06-05 10:32:53] 2025-06-05 08:32:41,677 | INFO     | [job] job monitor thread has finished
[2025-06-05 10:32:53] 2025-06-05 08:32:41,682 | INFO     | [payload] control thread has finished
[2025-06-05 10:32:53] 2025-06-05 08:32:41,753 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 10:32:53] 2025-06-05 08:32:41,787 | INFO     | [data] control thread has finished
[2025-06-05 10:32:53] 2025-06-05 08:32:41,851 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 10:32:53] 2025-06-05 08:32:41,865 | INFO     | [payload] validate_post thread has finished
[2025-06-05 10:32:53] 2025-06-05 08:32:41,916 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 10:32:53] 2025-06-05 08:32:42,227 | INFO     | [data] copytool_out thread has finished
[2025-06-05 10:32:53] 2025-06-05 08:32:42,293 | INFO     | [data] copytool_in thread has finished
[2025-06-05 10:32:53] 2025-06-05 08:32:42,611 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 10:32:53] 2025-06-05 08:32:43,157 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 10:32:53] 2025-06-05 08:32:43,649 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 10:32:53] 2025-06-05 08:32:44,162 | INFO     | [job] queue monitor thread has finished
[2025-06-05 10:32:53] 2025-06-05 08:32:47,654 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 10:32:53] 2025-06-05 08:32:48,577 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22560962946880)>', '<ExcThread(monitor, started 22560385259264)>']
[2025-06-05 10:32:53] 2025-06-05 08:32:49,265 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 10:32:53] 2025-06-05 08:32:49,266 | INFO     | [monitor] control thread has ended
[2025-06-05 10:32:53] 2025-06-05 08:32:53,603 | INFO     | all workflow threads have been joined
[2025-06-05 10:32:53] 2025-06-05 08:32:53,603 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 10:32:53] 2025-06-05 08:32:53,604 | INFO     | traces error code: 0
[2025-06-05 10:32:53] 2025-06-05 08:32:53,604 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 10:32:53] 2025-06-05 08:32:53,760 [wrapper] ==== pilot stdout END ====
[2025-06-05 10:32:53] 2025-06-05 08:32:53,763 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 10:32:53] 2025-06-05 08:32:53,766 [wrapper] pilotpid: 1983545
[2025-06-05 10:32:53] 2025-06-05 08:32:53,768 [wrapper] Pilot exit status: 0
[2025-06-05 10:32:53] 2025-06-05 08:32:53,779 [wrapper] pandaids: 6677400427
[2025-06-05 10:32:53] 2025-06-05 08:32:53,846 [wrapper] cleanup supervisor_pilot 2264809 1983546
[2025-06-05 10:32:53] 2025-06-05 08:32:53,849 [wrapper] Test setup, not cleaning
[2025-06-05 10:32:53] 2025-06-05 08:32:53,852 [wrapper] apfmon messages muted
[2025-06-05 10:32:53] 2025-06-05 08:32:53,855 [wrapper] ==== wrapper stdout END ====
[2025-06-05 10:32:53] 2025-06-05 08:32:53,858 [wrapper] ==== wrapper stderr END ====
[2025-06-05 10:32:53]  *** Error codes and diagnostics ***
[2025-06-05 10:32:53]     "exeErrorCode": 0,
[2025-06-05 10:32:53]     "exeErrorDiag": "",
[2025-06-05 10:32:53]     "pilotErrorCode": 0,
[2025-06-05 10:32:53]     "pilotErrorDiag": "",
[2025-06-05 10:32:53]  *** Listing of results directory ***
[2025-06-05 10:32:53] total 392924
[2025-06-05 10:32:53] -rw-r--r-- 1 boinc boinc    495897 Jun  2 22:47 pilot3.tar.gz
[2025-06-05 10:32:53] -rw-r--r-- 1 boinc boinc      5111 Jun  2 22:52 queuedata.json
[2025-06-05 10:32:53] -rwx------ 1 boinc boinc     37140 Jun  2 22:53 runpilot2-wrapper.sh
[2025-06-05 10:32:53] -rw-r--r-- 1 boinc boinc       100 Jun  5 07:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 10:32:53] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 07:50 run_atlas
[2025-06-05 10:32:53] -rw-r--r-- 1 boinc boinc       105 Jun  5 07:50 job.xml
[2025-06-05 10:32:53] -rw-r--r-- 2 boinc boinc 217658984 Jun  5 07:50 EVNT.45006593._000465.pool.root.1
[2025-06-05 10:32:53] -rw-r--r-- 2 boinc boinc    508867 Jun  5 07:50 input.tar.gz
[2025-06-05 10:32:53] -rw-r--r-- 1 boinc boinc      6635 Jun  5 07:50 init_data.xml
[2025-06-05 10:32:53] -rw-r--r-- 2 boinc boinc     15093 Jun  5 07:50 start_atlas.sh
[2025-06-05 10:32:53] drwxrwx--x 2 boinc boinc      4096 Jun  5 07:50 shared
[2025-06-05 10:32:53] -rw-r--r-- 1 boinc boinc         0 Jun  5 07:50 boinc_lockfile
[2025-06-05 10:32:53] -rw-r--r-- 1 boinc boinc      2524 Jun  5 07:50 pandaJob.out
[2025-06-05 10:32:53] -rw------- 1 boinc boinc    987109 Jun  5 07:50 agis_schedconf.cvmfs.json
[2025-06-05 10:32:53] -rw------- 1 boinc boinc   1598969 Jun  5 07:50 agis_ddmendpoints.agis.ALL.json
[2025-06-05 10:32:53] drwx------ 4 boinc boinc      4096 Jun  5 07:50 pilot3
[2025-06-05 10:32:53] -rw------- 1 boinc boinc 178458648 Jun  5 10:31 HITS.45006595._011606.pool.root.1
[2025-06-05 10:32:53] -rw-r--r-- 1 boinc boinc       528 Jun  5 10:32 boinc_task_state.xml
[2025-06-05 10:32:53] -rw------- 1 boinc boinc        95 Jun  5 10:32 pilot_heartbeat.json
[2025-06-05 10:32:53] -rw------- 1 boinc boinc      1034 Jun  5 10:32 memory_monitor_summary.json
[2025-06-05 10:32:53] -rw------- 1 boinc boinc    282044 Jun  5 10:32 log.45006595._011606.job.log.tgz.1
[2025-06-05 10:32:53] -rw------- 1 boinc boinc      7718 Jun  5 10:32 heartbeat.json
[2025-06-05 10:32:53] -rw-r--r-- 1 boinc boinc      8192 Jun  5 10:32 boinc_mmap_file
[2025-06-05 10:32:53] -rw-r--r-- 1 boinc boinc        26 Jun  5 10:32 wrapper_checkpoint.txt
[2025-06-05 10:32:53] -rw------- 1 boinc boinc      4672 Jun  5 10:32 pilotlog.txt
[2025-06-05 10:32:53] -rw------- 1 boinc boinc    918094 Jun  5 10:32 log.45006595._011606.job.log.1
[2025-06-05 10:32:53] -rw------- 1 boinc boinc       357 Jun  5 10:32 output.list
[2025-06-05 10:32:53] -rw-r--r-- 1 boinc boinc       620 Jun  5 10:32 runtime_log
[2025-06-05 10:32:53] -rw------- 1 boinc boinc   1218560 Jun  5 10:32 result.tar.gz
[2025-06-05 10:32:53] -rw-r--r-- 1 boinc boinc      9025 Jun  5 10:32 runtime_log.err
[2025-06-05 10:32:53] -rw------- 1 boinc boinc       662 Jun  5 10:32 0bbKDmDLRg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbggKDmgdcQon.diag
[2025-06-05 10:32:53] -rw-r--r-- 1 boinc boinc     20941 Jun  5 10:32 stderr.txt
[2025-06-05 10:32:53] HITS file was successfully produced:
[2025-06-05 10:32:53] -rw------- 1 boinc boinc 178458648 Jun  5 10:31 shared/HITS.pool.root.1
[2025-06-05 10:32:53]  *** Contents of shared directory: ***
[2025-06-05 10:32:53] total 388556
[2025-06-05 10:32:53] -rw-r--r-- 2 boinc boinc 217658984 Jun  5 07:50 ATLAS.root_0
[2025-06-05 10:32:53] -rw-r--r-- 2 boinc boinc    508867 Jun  5 07:50 input.tar.gz
[2025-06-05 10:32:53] -rw-r--r-- 2 boinc boinc     15093 Jun  5 07:50 start_atlas.sh
[2025-06-05 10:32:53] -rw------- 1 boinc boinc 178458648 Jun  5 10:31 HITS.pool.root.1
[2025-06-05 10:32:53] -rw------- 1 boinc boinc   1218560 Jun  5 10:32 result.tar.gz
10:32:55 (1979880): run_atlas exited; CPU time 37643.933203
10:32:55 (1979880): called boinc_finish(0)

</stderr_txt>
]]>

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