Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:27:15 (232305): wrapper (7.7.26015): starting
22:27:15 (232305): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 22:27:15] Arguments: --nthreads 4
[2025-06-04 22:27:15] Threads: 4
[2025-06-04 22:27:15] Checking for CVMFS
[2025-06-04 22:27:15] No cvmfs_config command found, will try listing directly
[2025-06-04 22:27:15] CVMFS is ok
[2025-06-04 22:27:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:27:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:27:15] Further information can be found at the LHC@home message board.
[2025-06-04 22:27:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:27:15] Checking for apptainer binary...
[2025-06-04 22:27:15] which: no apptainer in ((null))
[2025-06-04 22:27:15] apptainer is not installed, using version from CVMFS
[2025-06-04 22:27:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:27:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-06-04 22:27:15] apptainer works
[2025-06-04 22:27:15] Set ATHENA_PROC_NUMBER=4
[2025-06-04 22:27:15] Set ATHENA_CORE_NUMBER=4
[2025-06-04 22:27:15] Starting ATLAS job with PandaID=6677418551
[2025-06-04 22:27:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:03:25]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:03:25] 2025-06-04 22:57:01,070 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 01:03:25] 2025-06-04 22:57:01,701 | INFO     | monitor loop #657: job 0:6677418551 is in state 'finished'
[2025-06-05 01:03:25] 2025-06-04 22:57:01,701 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:03:25] 2025-06-04 22:57:04,204 | INFO     | monitor loop #658: job 0:6677418551 is in state 'finished'
[2025-06-05 01:03:25] 2025-06-04 22:57:04,204 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:03:25] 2025-06-04 22:57:05,062 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 01:03:25] 2025-06-04 22:57:05,063 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6677418551/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:03:25] 2025-06-04 22:57:05,064 | INFO     | extracted standard info from prmon json
[2025-06-05 01:03:25] 2025-06-04 22:57:05,064 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:03:25] 2025-06-04 22:57:05,064 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:03:25] 2025-06-04 22:57:05,064 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:03:25] 2025-06-04 22:57:05,064 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:03:25] 2025-06-04 22:57:05,068 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:03:25] 2025-06-04 22:57:05,068 | INFO     | sum of square deviations: 984941258.0
[2025-06-05 01:03:25] 2025-06-04 22:57:05,069 | INFO     | sum of deviations: -27071992150.0
[2025-06-05 01:03:25] 2025-06-04 22:57:05,070 | INFO     | mean x: 1749073326.0
[2025-06-05 01:03:25] 2025-06-04 22:57:05,070 | INFO     | mean y: 2414633.2040816327
[2025-06-05 01:03:25] 2025-06-04 22:57:05,070 | INFO     | -- intersect: 48077260687.87752
[2025-06-05 01:03:25] 2025-06-04 22:57:05,070 | INFO     | intersect: 48077260687.87752
[2025-06-05 01:03:25] 2025-06-04 22:57:05,070 | INFO     | chi2: 1.8831275808993742
[2025-06-05 01:03:25] 2025-06-04 22:57:05,071 | INFO     | sum of square deviations: 887813855.5
[2025-06-05 01:03:25] 2025-06-04 22:57:05,071 | INFO     | sum of deviations: -25398348905.499996
[2025-06-05 01:03:25] 2025-06-04 22:57:05,071 | INFO     | mean x: 1749073173.5
[2025-06-05 01:03:25] 2025-06-04 22:57:05,072 | INFO     | mean y: 2417262.0070422534
[2025-06-05 01:03:25] 2025-06-04 22:57:05,072 | INFO     | -- intersect: 50039449739.704315
[2025-06-05 01:03:25] 2025-06-04 22:57:05,072 | INFO     | intersect: 50039449739.704315
[2025-06-05 01:03:25] 2025-06-04 22:57:05,072 | INFO     | chi2: 1.8768968844259957
[2025-06-05 01:03:25] 2025-06-04 22:57:05,072 | INFO     | current chi2=1.8768968844259957 (change=0.3308695882624547 %)
[2025-06-05 01:03:25] 2025-06-04 22:57:05,072 | INFO     | right removable region: 141
[2025-06-05 01:03:25] 2025-06-04 22:57:05,072 | INFO     | sum of square deviations: 887813855.5
[2025-06-05 01:03:25] 2025-06-04 22:57:05,073 | INFO     | sum of deviations: -48152308709.99999
[2025-06-05 01:03:25] 2025-06-04 22:57:05,073 | INFO     | mean x: 1749073478.5
[2025-06-05 01:03:25] 2025-06-04 22:57:05,073 | INFO     | mean y: 2447181.5070422534
[2025-06-05 01:03:25] 2025-06-04 22:57:05,073 | INFO     | -- intersect: 94866844229.88757
[2025-06-05 01:03:25] 2025-06-04 22:57:05,074 | INFO     | intersect: 94866844229.88757
[2025-06-05 01:03:25] 2025-06-04 22:57:05,074 | INFO     | chi2: 0.31696730254089883
[2025-06-05 01:03:25] 2025-06-04 22:57:05,074 | INFO     | current chi2=0.31696730254089883 (change=83.16803886492298 %)
[2025-06-05 01:03:25] 2025-06-04 22:57:05,074 | INFO     | sum of square deviations: 797291228.0
[2025-06-05 01:03:25] 2025-06-04 22:57:05,075 | INFO     | sum of deviations: -43212168444.00001
[2025-06-05 01:03:25] 2025-06-04 22:57:05,075 | INFO     | mean x: 1749073631.0
[2025-06-05 01:03:25] 2025-06-04 22:57:05,075 | INFO     | mean y: 2438819.5036496352
[2025-06-05 01:03:25] 2025-06-04 22:57:05,075 | INFO     | -- intersect: 94800000500.10289
[2025-06-05 01:03:25] 2025-06-04 22:57:05,075 | INFO     | intersect: 94800000500.10289
[2025-06-05 01:03:25] 2025-06-04 22:57:05,076 | INFO     | chi2: 0.3140548964884112
[2025-06-05 01:03:25] 2025-06-04 22:57:05,076 | INFO     | current chi2=0.3140548964884112 (change=0.9188348543023193 %)
[2025-06-05 01:03:25] 2025-06-04 22:57:05,076 | INFO     | left removable region: 20
[2025-06-05 01:03:25] 2025-06-04 22:57:05,076 | INFO     | sum of square deviations: 549294020.0
[2025-06-05 01:03:25] 2025-06-04 22:57:05,077 | INFO     | sum of deviations: -29478321797.000004
[2025-06-05 01:03:25] 2025-06-04 22:57:05,077 | INFO     | mean x: 1749073753.0
[2025-06-05 01:03:25] 2025-06-04 22:57:05,077 | INFO     | mean y: 2420045.644628099
[2025-06-05 01:03:25] 2025-06-04 22:57:05,077 | INFO     | -- intersect: 93867922054.24196
[2025-06-05 01:03:25] 2025-06-04 22:57:05,077 | INFO     | intersect: 93867922054.24196
[2025-06-05 01:03:25] 2025-06-04 22:57:05,077 | INFO     | chi2: 0.2883348482070932
[2025-06-05 01:03:25] 2025-06-04 22:57:05,077 | INFO     | -- intersect: 93867922054.24196
[2025-06-05 01:03:25] 2025-06-04 22:57:05,078 | INFO     | current memory leak: -53.67 B/s (using 121 data points, chi2=0.29)
[2025-06-05 01:03:25] 2025-06-04 22:57:05,078 | INFO     | ..............................
[2025-06-05 01:03:25] 2025-06-04 22:57:05,078 | INFO     | . Timing measurements:
[2025-06-05 01:03:25] 2025-06-04 22:57:05,078 | INFO     | . get job = 0 s
[2025-06-05 01:03:25] 2025-06-04 22:57:05,078 | INFO     | . initial setup = 1 s
[2025-06-05 01:03:25] 2025-06-04 22:57:05,079 | INFO     | . payload setup = 7 s
[2025-06-05 01:03:25] 2025-06-04 22:57:05,079 | INFO     | . stage-in = 0 s
[2025-06-05 01:03:25] 2025-06-04 22:57:05,079 | INFO     | . payload execution = 8944 s
[2025-06-05 01:03:25] 2025-06-04 22:57:05,079 | INFO     | . stage-out = 0 s
[2025-06-05 01:03:25] 2025-06-04 22:57:05,079 | INFO     | . log creation = 0 s
[2025-06-05 01:03:25] 2025-06-04 22:57:05,079 | INFO     | ..............................
[2025-06-05 01:03:25] 2025-06-04 22:57:05,183 | INFO     | 
[2025-06-05 01:03:25] 2025-06-04 22:57:05,183 | INFO     | job summary report
[2025-06-05 01:03:25] 2025-06-04 22:57:05,184 | INFO     | --------------------------------------------------
[2025-06-05 01:03:25] 2025-06-04 22:57:05,184 | INFO     | PanDA job id: 6677418551
[2025-06-05 01:03:25] 2025-06-04 22:57:05,184 | INFO     | task id: 45006595
[2025-06-05 01:03:25] 2025-06-04 22:57:05,184 | INFO     | errors: (none)
[2025-06-05 01:03:25] 2025-06-04 22:57:05,184 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:03:25] 2025-06-04 22:57:05,184 | INFO     | pilot state: finished 
[2025-06-05 01:03:25] 2025-06-04 22:57:05,184 | INFO     | transexitcode: 0
[2025-06-05 01:03:25] 2025-06-04 22:57:05,184 | INFO     | exeerrorcode: 0
[2025-06-05 01:03:25] 2025-06-04 22:57:05,184 | INFO     | exeerrordiag: 
[2025-06-05 01:03:25] 2025-06-04 22:57:05,184 | INFO     | exitcode: 0
[2025-06-05 01:03:25] 2025-06-04 22:57:05,184 | INFO     | exitmsg: OK
[2025-06-05 01:03:25] 2025-06-04 22:57:05,184 | INFO     | cpuconsumptiontime: 34006 s
[2025-06-05 01:03:25] 2025-06-04 22:57:05,184 | INFO     | nevents: 400
[2025-06-05 01:03:25] 2025-06-04 22:57:05,185 | INFO     | neventsw: 0
[2025-06-05 01:03:25] 2025-06-04 22:57:05,185 | INFO     | pid: 243012
[2025-06-05 01:03:25] 2025-06-04 22:57:05,185 | INFO     | pgrp: 243012
[2025-06-05 01:03:25] 2025-06-04 22:57:05,185 | INFO     | corecount: 4
[2025-06-05 01:03:25] 2025-06-04 22:57:05,185 | INFO     | event service: False
[2025-06-05 01:03:25] 2025-06-04 22:57:05,185 | INFO     | sizes: {0: 2397352, 5: 2397558, 11: 2397614, 8955: 2425594, 8956: 2425593, 8957: 2434612, 8958: 2434796, 8964: 2434966}
[2025-06-05 01:03:25] 2025-06-04 22:57:05,185 | INFO     | --------------------------------------------------
[2025-06-05 01:03:25] 2025-06-04 22:57:05,185 | INFO     | 
[2025-06-05 01:03:25] 2025-06-04 22:57:05,185 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-06-05 01:03:25] 2025-06-04 22:57:05,207 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,207 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,208 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,208 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,208 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,208 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,208 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,208 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,208 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,208 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,208 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,208 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,209 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,209 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,209 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,209 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,209 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,209 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:03:25] 2025-06-04 22:57:05,209 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,209 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:03:25] 2025-06-04 22:57:05,209 | INFO     | job 6677418551 has completed (purged errors)
[2025-06-05 01:03:25] 2025-06-04 22:57:05,210 | INFO     | overall cleanup function is called
[2025-06-05 01:03:25] 2025-06-04 22:57:06,218 | INFO     | --- collectZombieJob: --- 10, [243012]
[2025-06-05 01:03:25] 2025-06-04 22:57:06,218 | INFO     | zombie collector waiting for pid 243012
[2025-06-05 01:03:25] 2025-06-04 22:57:06,218 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:03:25] 2025-06-04 22:57:06,218 | INFO     | collected zombie processes
[2025-06-05 01:03:25] 2025-06-04 22:57:06,218 | INFO     | will attempt to kill all subprocesses of pid=243012
[2025-06-05 01:03:25] 2025-06-04 22:57:06,582 | INFO     | process IDs to be killed: [243012] (in reverse order)
[2025-06-05 01:03:25] 2025-06-04 22:57:06,684 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:03:25] 2025-06-04 22:57:06,685 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:03:25] 2025-06-04 22:57:06,696 | INFO     | did not find any defunct processes belonging to 243012
[2025-06-05 01:03:25] 2025-06-04 22:57:06,707 | INFO     | did not find any defunct processes belonging to 243012
[2025-06-05 01:03:25] 2025-06-04 22:57:06,707 | INFO     | ready for new job
[2025-06-05 01:03:25] 2025-06-04 22:57:06,707 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:03:25] 2025-06-04 22:57:06,709 | INFO     | **************************************
[2025-06-05 01:03:25] 2025-06-04 22:57:06,710 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:03:25] 2025-06-04 22:57:06,710 | INFO     | **************************************
[2025-06-05 01:03:25] 2025-06-04 22:57:06,710 | INFO     | 
[2025-06-05 01:03:25] 2025-06-04 22:57:06,714 | INFO     | architecture information:
[2025-06-05 01:03:25] 2025-06-04 22:57:06,715 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:03:25] 2025-06-04 22:57:06,730 | INFO     | cat /etc/os-release:
[2025-06-05 01:03:25] NAME="CentOS Linux"
[2025-06-05 01:03:25] VERSION="7 (Core)"
[2025-06-05 01:03:25] ID="centos"
[2025-06-05 01:03:25] ID_LIKE="rhel fedora"
[2025-06-05 01:03:25] VERSION_ID="7"
[2025-06-05 01:03:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:03:25] ANSI_COLOR="0;31"
[2025-06-05 01:03:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:03:25] HOME_URL="https://www.centos.org/"
[2025-06-05 01:03:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:03:25] 
[2025-06-05 01:03:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:03:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:03:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:03:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:03:25] 
[2025-06-05 01:03:25] 2025-06-04 22:57:06,731 | INFO     | **************************************
[2025-06-05 01:03:25] 2025-06-04 22:57:07,244 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-06-05 01:03:25] 2025-06-04 22:57:07,260 | INFO     | sufficient remaining disk space (659592052736 B)
[2025-06-05 01:03:25] 2025-06-04 22:57:07,260 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:03:25] 2025-06-04 22:57:07,261 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:03:25] 2025-06-04 22:57:07,261 | INFO     | update_server=False
[2025-06-05 01:03:25] 2025-06-04 22:57:07,261 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:03:25] 2025-06-04 22:57:07,261 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 01:03:25] 2025-06-04 22:57:07,261 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:03:25] 2025-06-04 22:57:07,262 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:03:25] 2025-06-04 22:57:07,262 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:03:25] 2025-06-04 22:57:07,262 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:03:25] 2025-06-04 22:57:07,303 | INFO     | all payload control threads have been joined
[2025-06-05 01:03:25] 2025-06-04 22:57:07,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:03:25] 2025-06-04 22:57:07,714 | INFO     | aborting loop
[2025-06-05 01:03:25] 2025-06-04 22:57:08,095 | INFO     | all data control threads have been joined
[2025-06-05 01:03:25] 2025-06-04 22:57:08,266 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:03:25] 2025-06-04 22:57:08,287 | INFO     | all job control threads have been joined
[2025-06-05 01:03:25] 2025-06-04 22:57:08,308 | INFO     | [payload] control thread has finished
[2025-06-05 01:03:25] 2025-06-04 22:57:08,381 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:03:25] 2025-06-04 22:57:08,505 | INFO     | [job] validate thread has finished
[2025-06-05 01:03:25] 2025-06-04 22:57:08,719 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:03:25] 2025-06-04 22:57:08,740 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:03:25] 2025-06-04 22:57:08,813 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:03:25] 2025-06-04 22:57:08,914 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:03:25] 2025-06-04 22:57:09,016 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:03:25] 2025-06-04 22:57:09,100 | INFO     | [data] control thread has finished
[2025-06-05 01:03:25] 2025-06-04 22:57:09,222 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:03:25] 2025-06-04 22:57:09,266 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:03:25] 2025-06-04 22:57:09,292 | INFO     | [job] control thread has finished
[2025-06-05 01:03:25] 2025-06-04 22:57:09,628 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:03:25] 2025-06-04 22:57:10,197 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:03:25] 2025-06-04 22:57:11,202 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:03:25] 2025-06-04 22:57:13,634 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:03:25] 2025-06-04 22:57:17,613 | INFO     | job.realtimelogging is not enabled
[2025-06-05 01:03:25] 2025-06-04 22:57:18,618 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:03:25] 2025-06-04 22:57:19,192 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23397415769920)>', '<ExcThread(monitor, started 23397176145664)>']
[2025-06-05 01:03:25] 2025-06-04 22:57:19,314 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:03:25] 2025-06-04 22:57:19,314 | INFO     | [monitor] control thread has ended
[2025-06-05 01:03:25] 2025-06-04 22:57:22,884 [wrapper] supervise_pilot (15 min periods counter: 11)
[2025-06-05 01:03:25] 2025-06-04 22:57:24,217 | INFO     | all workflow threads have been joined
[2025-06-05 01:03:25] 2025-06-04 22:57:24,217 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:03:25] 2025-06-04 22:57:24,217 | INFO     | traces error code: 0
[2025-06-05 01:03:25] 2025-06-04 22:57:24,218 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:03:25] 2025-06-04 22:57:24,421 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:03:25] 2025-06-04 22:57:24,423 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:03:25] 2025-06-04 22:57:24,425 [wrapper] pilotpid: 236007
[2025-06-05 01:03:25] 2025-06-04 22:57:24,427 [wrapper] Pilot exit status: 0
[2025-06-05 01:03:25] 2025-06-04 22:57:24,436 [wrapper] pandaids: 6677418551
[2025-06-05 01:03:25] 2025-06-04 22:57:24,504 [wrapper] cleanup supervisor_pilot  514158 236008
[2025-06-05 01:03:25] 2025-06-04 22:57:24,507 [wrapper] Test setup, not cleaning
[2025-06-05 01:03:25] 2025-06-04 22:57:24,510 [wrapper] apfmon messages muted
[2025-06-05 01:03:25] 2025-06-04 22:57:24,512 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:03:25] 2025-06-04 22:57:24,515 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:03:25]  *** Error codes and diagnostics ***
[2025-06-05 01:03:25]     "exeErrorCode": 0,
[2025-06-05 01:03:25]     "exeErrorDiag": "",
[2025-06-05 01:03:25]     "pilotErrorCode": 0,
[2025-06-05 01:03:25]     "pilotErrorDiag": "",
[2025-06-05 01:03:25]  *** Listing of results directory ***
[2025-06-05 01:03:25] total 389876
[2025-06-05 01:03:25] -rw-r--r-- 1 boinc boinc    495897 Jun  3 00:22 pilot3.tar.gz
[2025-06-05 01:03:25] -rwx------ 1 boinc boinc     37140 Jun  3 00:35 runpilot2-wrapper.sh
[2025-06-05 01:03:25] -rw-r--r-- 1 boinc boinc      5111 Jun  3 00:35 queuedata.json
[2025-06-05 01:03:25] -rw-r--r-- 1 boinc boinc       100 Jun  4 22:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:03:25] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 22:27 run_atlas
[2025-06-05 01:03:25] -rw-r--r-- 1 boinc boinc       105 Jun  4 22:27 job.xml
[2025-06-05 01:03:25] -rw-r--r-- 2 boinc boinc 213182165 Jun  4 22:27 EVNT.45006593._000535.pool.root.1
[2025-06-05 01:03:25] -rw-r--r-- 1 boinc boinc      6636 Jun  4 22:27 init_data.xml
[2025-06-05 01:03:25] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:27 start_atlas.sh
[2025-06-05 01:03:25] drwxrwx--x 2 boinc boinc      4096 Jun  4 22:27 shared
[2025-06-05 01:03:25] -rw-r--r-- 2 boinc boinc    508875 Jun  4 22:27 input.tar.gz
[2025-06-05 01:03:25] -rw-r--r-- 1 boinc boinc         0 Jun  4 22:27 boinc_lockfile
[2025-06-05 01:03:25] -rw-r--r-- 1 boinc boinc      2525 Jun  4 22:27 pandaJob.out
[2025-06-05 01:03:25] -rw------- 1 boinc boinc    987032 Jun  4 22:27 agis_schedconf.cvmfs.json
[2025-06-05 01:03:25] -rw------- 1 boinc boinc   1598969 Jun  4 22:27 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:03:25] drwx------ 4 boinc boinc      4096 Jun  4 22:27 pilot3
[2025-06-05 01:03:25] -rw------- 1 boinc boinc 179958631 Jun  5 00:56 HITS.45006595._013361.pool.root.1
[2025-06-05 01:03:25] -rw-r--r-- 1 boinc boinc       528 Jun  5 00:56 boinc_task_state.xml
[2025-06-05 01:03:25] -rw------- 1 boinc boinc        95 Jun  5 00:56 pilot_heartbeat.json
[2025-06-05 01:03:25] -rw------- 1 boinc boinc      1036 Jun  5 00:56 memory_monitor_summary.json
[2025-06-05 01:03:25] -rw------- 1 boinc boinc    282254 Jun  5 00:56 log.45006595._013361.job.log.tgz.1
[2025-06-05 01:03:25] -rw------- 1 boinc boinc      7726 Jun  5 00:57 heartbeat.json
[2025-06-05 01:03:25] -rw------- 1 boinc boinc      4558 Jun  5 00:57 pilotlog.txt
[2025-06-05 01:03:25] -rw------- 1 boinc boinc    848356 Jun  5 00:57 log.45006595._013361.job.log.1
[2025-06-05 01:03:25] -rw------- 1 boinc boinc       357 Jun  5 00:57 output.list
[2025-06-05 01:03:25] -rw-r--r-- 1 boinc boinc       620 Jun  5 00:57 runtime_log
[2025-06-05 01:03:25] -rw------- 1 boinc boinc   1146880 Jun  5 00:57 result.tar.gz
[2025-06-05 01:03:25] -rw-r--r-- 1 boinc boinc      9025 Jun  5 00:57 runtime_log.err
[2025-06-05 01:03:25] -rw------- 1 boinc boinc       662 Jun  5 00:57 ktrLDmBwSg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmixgKDmwV5eTm.diag
[2025-06-05 01:03:25] -rw-r--r-- 1 boinc boinc        26 Jun  5 01:03 wrapper_checkpoint.txt
[2025-06-05 01:03:25] -rw-r--r-- 1 boinc boinc      8192 Jun  5 01:03 boinc_mmap_file
[2025-06-05 01:03:25] -rw-r--r-- 1 boinc boinc     20925 Jun  5 01:03 stderr.txt
[2025-06-05 01:03:25] HITS file was successfully produced:
[2025-06-05 01:03:25] -rw------- 1 boinc boinc 179958631 Jun  5 00:56 shared/HITS.pool.root.1
[2025-06-05 01:03:25]  *** Contents of shared directory: ***
[2025-06-05 01:03:25] total 385576
[2025-06-05 01:03:25] -rw-r--r-- 2 boinc boinc 213182165 Jun  4 22:27 ATLAS.root_0
[2025-06-05 01:03:25] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:27 start_atlas.sh
[2025-06-05 01:03:25] -rw-r--r-- 2 boinc boinc    508875 Jun  4 22:27 input.tar.gz
[2025-06-05 01:03:25] -rw------- 1 boinc boinc 179958631 Jun  5 00:56 HITS.pool.root.1
[2025-06-05 01:03:25] -rw------- 1 boinc boinc   1146880 Jun  5 00:57 result.tar.gz
01:03:27 (232305): run_atlas exited; CPU time 34343.714830
01:03:27 (232305): called boinc_finish(0)

</stderr_txt>
]]>

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