Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:16:35 (12598): wrapper (7.7.26015): starting
12:16:35 (12598): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:16:35] Arguments: --nthreads 8
[2025-06-03 12:16:35] Threads: 8
[2025-06-03 12:16:35] Checking for CVMFS
[2025-06-03 12:16:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:16:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:16:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:16:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:16:36] 2.11.2.0 6418 31649 93568 146737 3 154 20150248 25165825 4356 130560 0 16244717 99.743 19598840 2155 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 12:16:36] CVMFS is ok
[2025-06-03 12:16:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:16:36] Checking for apptainer binary...
[2025-06-03 12:16:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:16:36] Running /usr/bin/apptainer --version
[2025-06-03 12:16:36] apptainer version 1.3.2-1.el7
[2025-06-03 12:16:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:16:37] cg-vwn357.simple-grid.lan
[2025-06-03 12:16:37] apptainer works
[2025-06-03 12:16:37] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:16:37] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:16:37] Starting ATLAS job with PandaID=6668864109
[2025-06-03 12:16:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:29:26]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:29:26] 2025-06-03 15:28:58,185 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6668864109/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:29:26] 2025-06-03 15:28:58,186 | INFO     | extracted standard info from prmon json
[2025-06-03 18:29:26] 2025-06-03 15:28:58,186 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:29:26] 2025-06-03 15:28:58,186 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:29:26] 2025-06-03 15:28:58,187 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:29:26] 2025-06-03 15:28:58,187 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:29:26] 2025-06-03 15:28:58,193 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:29:26] 2025-06-03 15:28:58,194 | INFO     | sum of square deviations: 8797783560.0
[2025-06-03 18:29:26] 2025-06-03 15:28:58,197 | INFO     | sum of deviations: -71936419708.99997
[2025-06-03 18:29:26] 2025-06-03 15:28:58,197 | INFO     | mean x: 1748955150.0
[2025-06-03 18:29:26] 2025-06-03 15:28:58,197 | INFO     | mean y: 2529429.1967213117
[2025-06-03 18:29:26] 2025-06-03 15:28:58,197 | INFO     | -- intersect: 14303128081.639248
[2025-06-03 18:29:26] 2025-06-03 15:28:58,197 | INFO     | intersect: 14303128081.639248
[2025-06-03 18:29:26] 2025-06-03 15:28:58,198 | INFO     | chi2: 2.6024025678604312
[2025-06-03 18:29:26] 2025-06-03 15:28:58,198 | INFO     | sum of square deviations: 8372156975.0
[2025-06-03 18:29:26] 2025-06-03 15:28:58,207 | INFO     | sum of deviations: -50131746967.50001
[2025-06-03 18:29:26] 2025-06-03 15:28:58,208 | INFO     | mean x: 1748954997.5
[2025-06-03 18:29:26] 2025-06-03 15:28:58,208 | INFO     | mean y: 2537145.53
[2025-06-03 18:29:26] 2025-06-03 15:28:58,208 | INFO     | -- intersect: 10475127381.717564
[2025-06-03 18:29:26] 2025-06-03 15:28:58,208 | INFO     | intersect: 10475127381.717564
[2025-06-03 18:29:26] 2025-06-03 15:28:58,209 | INFO     | chi2: 1.8338703123334055
[2025-06-03 18:29:26] 2025-06-03 15:28:58,209 | INFO     | current chi2=1.8338703123334055 (change=29.53164375943863 %)
[2025-06-03 18:29:26] 2025-06-03 15:28:58,209 | INFO     | sum of square deviations: 7960484140.0
[2025-06-03 18:29:26] 2025-06-03 15:28:58,212 | INFO     | sum of deviations: -48924603602.00001
[2025-06-03 18:29:26] 2025-06-03 15:28:58,212 | INFO     | mean x: 1748954845.0
[2025-06-03 18:29:26] 2025-06-03 15:28:58,212 | INFO     | mean y: 2537592.559322034
[2025-06-03 18:29:26] 2025-06-03 15:28:58,213 | INFO     | -- intersect: 10751497204.131687
[2025-06-03 18:29:26] 2025-06-03 15:28:58,213 | INFO     | intersect: 10751497204.131687
[2025-06-03 18:29:26] 2025-06-03 15:28:58,213 | INFO     | chi2: 1.832020597441177
[2025-06-03 18:29:26] 2025-06-03 15:28:58,213 | INFO     | current chi2=1.832020597441177 (change=0.10086399674985465 %)
[2025-06-03 18:29:26] 2025-06-03 15:28:58,213 | INFO     | right removable region: 294
[2025-06-03 18:29:26] 2025-06-03 15:28:58,214 | INFO     | sum of square deviations: 8372156975.0
[2025-06-03 18:29:26] 2025-06-03 15:28:58,217 | INFO     | sum of deviations: -121341780628.49997
[2025-06-03 18:29:26] 2025-06-03 15:28:58,217 | INFO     | mean x: 1748955302.5
[2025-06-03 18:29:26] 2025-06-03 15:28:58,217 | INFO     | mean y: 2547012.1033333335
[2025-06-03 18:29:26] 2025-06-03 15:28:58,217 | INFO     | -- intersect: 25351014710.298492
[2025-06-03 18:29:26] 2025-06-03 15:28:58,217 | INFO     | intersect: 25351014710.298492
[2025-06-03 18:29:26] 2025-06-03 15:28:58,218 | INFO     | chi2: 1.0879774213167726
[2025-06-03 18:29:26] 2025-06-03 15:28:58,218 | INFO     | current chi2=1.0879774213167726 (change=58.19334661157921 %)
[2025-06-03 18:29:26] 2025-06-03 15:28:58,218 | INFO     | sum of square deviations: 7960484140.0
[2025-06-03 18:29:26] 2025-06-03 15:28:58,221 | INFO     | sum of deviations: -119567018537.99997
[2025-06-03 18:29:26] 2025-06-03 15:28:58,222 | INFO     | mean x: 1748955455.0
[2025-06-03 18:29:26] 2025-06-03 15:28:58,222 | INFO     | mean y: 2546334.7254237286
[2025-06-03 18:29:26] 2025-06-03 15:28:58,222 | INFO     | -- intersect: 26271977393.49029
[2025-06-03 18:29:26] 2025-06-03 15:28:58,222 | INFO     | intersect: 26271977393.49029
[2025-06-03 18:29:26] 2025-06-03 15:28:58,222 | INFO     | chi2: 1.0700016035443232
[2025-06-03 18:29:26] 2025-06-03 15:28:58,222 | INFO     | current chi2=1.0700016035443232 (change=1.6522234212078928 %)
[2025-06-03 18:29:26] 2025-06-03 15:28:58,223 | INFO     | left removable region: 20
[2025-06-03 18:29:26] 2025-06-03 15:28:58,223 | INFO     | sum of square deviations: 6378584712.5
[2025-06-03 18:29:26] 2025-06-03 15:28:58,226 | INFO     | sum of deviations: -79606222409.50003
[2025-06-03 18:29:26] 2025-06-03 15:28:58,226 | INFO     | mean x: 1748955424.5
[2025-06-03 18:29:26] 2025-06-03 15:28:58,226 | INFO     | mean y: 2548874.208029197
[2025-06-03 18:29:26] 2025-06-03 15:28:58,226 | INFO     | -- intersect: 21829919800.897522
[2025-06-03 18:29:26] 2025-06-03 15:28:58,230 | INFO     | intersect: 21829919800.897522
[2025-06-03 18:29:26] 2025-06-03 15:28:58,230 | INFO     | chi2: 0.27048980749694823
[2025-06-03 18:29:26] 2025-06-03 15:28:58,230 | INFO     | -- intersect: 21829919800.897522
[2025-06-03 18:29:26] 2025-06-03 15:28:58,230 | INFO     | current memory leak: -12.48 B/s (using 274 data points, chi2=0.27)
[2025-06-03 18:29:26] 2025-06-03 15:28:58,231 | INFO     | ..............................
[2025-06-03 18:29:26] 2025-06-03 15:28:58,232 | INFO     | . Timing measurements:
[2025-06-03 18:29:26] 2025-06-03 15:28:58,232 | INFO     | . get job = 0 s
[2025-06-03 18:29:26] 2025-06-03 15:28:58,232 | INFO     | . initial setup = 2 s
[2025-06-03 18:29:26] 2025-06-03 15:28:58,232 | INFO     | . payload setup = 13 s
[2025-06-03 18:29:26] 2025-06-03 15:28:58,232 | INFO     | . stage-in = 0 s
[2025-06-03 18:29:26] 2025-06-03 15:28:58,232 | INFO     | . payload execution = 18591 s
[2025-06-03 18:29:26] 2025-06-03 15:28:58,232 | INFO     | . stage-out = 3 s
[2025-06-03 18:29:26] 2025-06-03 15:28:58,232 | INFO     | . log creation = 0 s
[2025-06-03 18:29:26] 2025-06-03 15:28:58,232 | INFO     | ..............................
[2025-06-03 18:29:26] 2025-06-03 15:28:58,772 | INFO     | 
[2025-06-03 18:29:26] 2025-06-03 15:28:58,772 | INFO     | job summary report
[2025-06-03 18:29:26] 2025-06-03 15:28:58,772 | INFO     | --------------------------------------------------
[2025-06-03 18:29:26] 2025-06-03 15:28:58,772 | INFO     | PanDA job id: 6668864109
[2025-06-03 18:29:26] 2025-06-03 15:28:58,772 | INFO     | task id: 44871837
[2025-06-03 18:29:26] 2025-06-03 15:28:58,772 | INFO     | errors: (none)
[2025-06-03 18:29:26] 2025-06-03 15:28:58,772 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:29:26] 2025-06-03 15:28:58,773 | INFO     | pilot state: finished 
[2025-06-03 18:29:26] 2025-06-03 15:28:58,773 | INFO     | transexitcode: 0
[2025-06-03 18:29:26] 2025-06-03 15:28:58,773 | INFO     | exeerrorcode: 0
[2025-06-03 18:29:26] 2025-06-03 15:28:58,773 | INFO     | exeerrordiag: 
[2025-06-03 18:29:26] 2025-06-03 15:28:58,773 | INFO     | exitcode: 0
[2025-06-03 18:29:26] 2025-06-03 15:28:58,773 | INFO     | exitmsg: OK
[2025-06-03 18:29:26] 2025-06-03 15:28:58,773 | INFO     | cpuconsumptiontime: 71522 s
[2025-06-03 18:29:26] 2025-06-03 15:28:58,773 | INFO     | nevents: 400
[2025-06-03 18:29:26] 2025-06-03 15:28:58,773 | INFO     | neventsw: 0
[2025-06-03 18:29:26] 2025-06-03 15:28:58,774 | INFO     | pid: 22887
[2025-06-03 18:29:26] 2025-06-03 15:28:58,774 | INFO     | pgrp: 22887
[2025-06-03 18:29:26] 2025-06-03 15:28:58,774 | INFO     | corecount: 8
[2025-06-03 18:29:26] 2025-06-03 15:28:58,774 | INFO     | event service: False
[2025-06-03 18:29:26] 2025-06-03 15:28:58,774 | INFO     | sizes: {0: 2405235, 1: 2405235, 9: 2405469, 12: 2405497, 18608: 2437201, 18613: 2446144, 18615: 2446328, 18696: 2446498}
[2025-06-03 18:29:26] 2025-06-03 15:28:58,774 | INFO     | --------------------------------------------------
[2025-06-03 18:29:26] 2025-06-03 15:28:58,774 | INFO     | 
[2025-06-03 18:29:26] 2025-06-03 15:28:58,774 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-06-03 18:29:26] 2025-06-03 15:28:59,329 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,329 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,329 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,329 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,329 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,329 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,330 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,330 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,330 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,330 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,330 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,330 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,330 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,331 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,331 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,331 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,331 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:29:26] 2025-06-03 15:28:59,331 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,331 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:29:26] 2025-06-03 15:28:59,331 | INFO     | job 6668864109 has completed (purged errors)
[2025-06-03 18:29:26] 2025-06-03 15:28:59,331 | INFO     | overall cleanup function is called
[2025-06-03 18:29:26] 2025-06-03 15:29:00,340 | INFO     | --- collectZombieJob: --- 10, [22887]
[2025-06-03 18:29:26] 2025-06-03 15:29:00,341 | INFO     | zombie collector waiting for pid 22887
[2025-06-03 18:29:26] 2025-06-03 15:29:00,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:29:26] 2025-06-03 15:29:00,341 | INFO     | collected zombie processes
[2025-06-03 18:29:26] 2025-06-03 15:29:00,341 | INFO     | will attempt to kill all subprocesses of pid=22887
[2025-06-03 18:29:26] 2025-06-03 15:29:00,463 | INFO     | process IDs to be killed: [22887] (in reverse order)
[2025-06-03 18:29:26] 2025-06-03 15:29:01,163 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:29:26] 2025-06-03 15:29:01,163 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:29:26] 2025-06-03 15:29:01,167 | INFO     | did not find any defunct processes belonging to 22887
[2025-06-03 18:29:26] 2025-06-03 15:29:01,173 | INFO     | did not find any defunct processes belonging to 22887
[2025-06-03 18:29:26] 2025-06-03 15:29:01,173 | INFO     | ready for new job
[2025-06-03 18:29:26] 2025-06-03 15:29:01,173 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:29:26] 2025-06-03 15:29:01,176 | INFO     | **************************************
[2025-06-03 18:29:26] 2025-06-03 15:29:01,176 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:29:26] 2025-06-03 15:29:01,176 | INFO     | **************************************
[2025-06-03 18:29:26] 2025-06-03 15:29:01,176 | INFO     | 
[2025-06-03 18:29:26] 2025-06-03 15:29:01,177 | INFO     | pilot is running in a VM
[2025-06-03 18:29:26] 2025-06-03 15:29:01,177 | INFO     | architecture information:
[2025-06-03 18:29:26] 2025-06-03 15:29:01,187 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:29:26] 2025-06-03 15:29:01,320 | INFO     | cat /etc/os-release:
[2025-06-03 18:29:26] NAME="CentOS Linux"
[2025-06-03 18:29:26] VERSION="7 (Core)"
[2025-06-03 18:29:26] ID="centos"
[2025-06-03 18:29:26] ID_LIKE="rhel fedora"
[2025-06-03 18:29:26] VERSION_ID="7"
[2025-06-03 18:29:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:29:26] ANSI_COLOR="0;31"
[2025-06-03 18:29:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:29:26] HOME_URL="https://www.centos.org/"
[2025-06-03 18:29:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:29:26] 
[2025-06-03 18:29:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:29:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:29:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:29:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:29:26] 
[2025-06-03 18:29:26] 2025-06-03 15:29:01,320 | INFO     | **************************************
[2025-06-03 18:29:26] 2025-06-03 15:29:01,824 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-06-03 18:29:26] 2025-06-03 15:29:01,952 | INFO     | sufficient remaining disk space (496588816384 B)
[2025-06-03 18:29:26] 2025-06-03 15:29:01,953 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:29:26] 2025-06-03 15:29:01,953 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:29:26] 2025-06-03 15:29:01,953 | INFO     | update_server=False
[2025-06-03 18:29:26] 2025-06-03 15:29:01,953 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:29:26] 2025-06-03 15:29:02,062 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:29:26] 2025-06-03 15:29:02,062 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:29:26] 2025-06-03 15:29:02,062 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:29:26] 2025-06-03 15:29:02,070 | INFO     | all payload control threads have been joined
[2025-06-03 18:29:26] 2025-06-03 15:29:02,198 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:29:26] 2025-06-03 15:29:02,199 | INFO     | aborting loop
[2025-06-03 18:29:26] 2025-06-03 15:29:02,550 | INFO     | all data control threads have been joined
[2025-06-03 18:29:26] 2025-06-03 15:29:02,927 | INFO     | all job control threads have been joined
[2025-06-03 18:29:26] 2025-06-03 15:29:02,960 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:29:26] 2025-06-03 15:29:02,991 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:29:26] 2025-06-03 15:29:03,077 | INFO     | [payload] control thread has finished
[2025-06-03 18:29:26] 2025-06-03 15:29:03,101 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:29:26] 2025-06-03 15:29:03,205 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:29:26] 2025-06-03 15:29:03,248 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:29:26] 2025-06-03 15:29:03,257 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:29:26] 2025-06-03 15:29:03,398 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:29:26] 2025-06-03 15:29:03,556 | INFO     | [data] control thread has finished
[2025-06-03 18:29:26] 2025-06-03 15:29:03,877 | INFO     | [job] validate thread has finished
[2025-06-03 18:29:26] 2025-06-03 15:29:03,881 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:29:26] 2025-06-03 15:29:03,881 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:29:26] 2025-06-03 15:29:03,898 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:29:26] 2025-06-03 15:29:03,933 | INFO     | [job] control thread has finished
[2025-06-03 18:29:26] 2025-06-03 15:29:03,938 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:29:26] 2025-06-03 15:29:04,404 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:29:26] 2025-06-03 15:29:04,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:29:26] 2025-06-03 15:29:04,997 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:29:26] 2025-06-03 15:29:08,860 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:29:26] 2025-06-03 15:29:09,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139733340120896)>', '<ExcThread(monitor, started 139732902196992)>']
[2025-06-03 18:29:26] 2025-06-03 15:29:10,111 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:29:26] 2025-06-03 15:29:10,112 | INFO     | [monitor] control thread has ended
[2025-06-03 18:29:26] 2025-06-03 15:29:14,978 | INFO     | all workflow threads have been joined
[2025-06-03 18:29:26] 2025-06-03 15:29:14,979 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:29:26] 2025-06-03 15:29:14,979 | INFO     | traces error code: 0
[2025-06-03 18:29:26] 2025-06-03 15:29:14,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:29:26] 2025-06-03 15:29:15,386 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:29:26] 2025-06-03 15:29:15,461 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:29:26] 2025-06-03 15:29:15,499 [wrapper] pilotpid: 16325
[2025-06-03 18:29:26] 2025-06-03 15:29:15,590 [wrapper] Pilot exit status: 0
[2025-06-03 18:29:26] 2025-06-03 15:29:16,030 [wrapper] pandaids: 6668864109
[2025-06-03 18:29:26] 2025-06-03 15:29:16,625 [wrapper] cleanup supervisor_pilot  5926 16326
[2025-06-03 18:29:26] 2025-06-03 15:29:16,721 [wrapper] Test setup, not cleaning
[2025-06-03 18:29:26] 2025-06-03 15:29:16,774 [wrapper] apfmon messages muted
[2025-06-03 18:29:26] 2025-06-03 15:29:16,865 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:29:26] 2025-06-03 15:29:16,972 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:29:26]  *** Error codes and diagnostics ***
[2025-06-03 18:29:26]     "exeErrorCode": 0,
[2025-06-03 18:29:26]     "exeErrorDiag": "",
[2025-06-03 18:29:26]     "pilotErrorCode": 0,
[2025-06-03 18:29:26]     "pilotErrorDiag": "",
[2025-06-03 18:29:26]  *** Listing of results directory ***
[2025-06-03 18:29:26] total 420996
[2025-06-03 18:29:26] -rw-r--r--. 1 boinc boinc    495897 May 28 22:46 pilot3.tar.gz
[2025-06-03 18:29:26] -rwx------. 1 boinc boinc     37140 May 28 22:52 runpilot2-wrapper.sh
[2025-06-03 18:29:26] -rw-r--r--. 1 boinc boinc      5111 May 28 22:52 queuedata.json
[2025-06-03 18:29:26] -rw-r--r--. 1 boinc boinc       100 Jun  3 12:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:29:26] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 12:16 run_atlas
[2025-06-03 18:29:26] -rw-r--r--. 1 boinc boinc       105 Jun  3 12:16 job.xml
[2025-06-03 18:29:26] -rw-r--r--. 1 boinc boinc      6393 Jun  3 12:16 init_data.xml
[2025-06-03 18:29:26] -rw-r--r--. 2 boinc boinc 224613970 Jun  3 12:16 EVNT.44871834._003516.pool.root.1
[2025-06-03 18:29:26] -rw-r--r--. 2 boinc boinc     15093 Jun  3 12:16 start_atlas.sh
[2025-06-03 18:29:26] drwxrwx--x. 2 boinc boinc        68 Jun  3 12:16 shared
[2025-06-03 18:29:26] -rw-r--r--. 2 boinc boinc    508878 Jun  3 12:16 input.tar.gz
[2025-06-03 18:29:26] -rw-r--r--. 1 boinc boinc         0 Jun  3 12:16 boinc_lockfile
[2025-06-03 18:29:26] -rw-r--r--. 1 boinc boinc      2559 Jun  3 12:16 pandaJob.out
[2025-06-03 18:29:26] -rw-------. 1 boinc boinc    985490 Jun  3 12:16 agis_schedconf.cvmfs.json
[2025-06-03 18:29:26] drwx------. 4 boinc boinc      4096 Jun  3 12:16 pilot3
[2025-06-03 18:29:26] -rw-------. 1 boinc boinc 198590330 Jun  3 17:26 HITS.44871837._090358.pool.root.1
[2025-06-03 18:29:26] -rw-r--r--. 1 boinc boinc       531 Jun  3 17:26 boinc_task_state.xml
[2025-06-03 18:29:26] -rw-------. 1 boinc boinc      1030 Jun  3 17:27 memory_monitor_summary.json
[2025-06-03 18:29:26] -rw-------. 1 boinc boinc   1603667 Jun  3 17:27 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:29:26] -rw-------. 1 boinc boinc    431355 Jun  3 17:27 log.44871837._090358.job.log.tgz.1
[2025-06-03 18:29:26] -rw-------. 1 boinc boinc        95 Jun  3 17:28 pilot_heartbeat.json
[2025-06-03 18:29:26] -rw-------. 1 boinc boinc      7691 Jun  3 17:28 heartbeat.json
[2025-06-03 18:29:26] -rw-------. 1 boinc boinc      4417 Jun  3 17:29 pilotlog.txt
[2025-06-03 18:29:26] -rw-------. 1 boinc boinc   1604776 Jun  3 17:29 log.44871837._090358.job.log.1
[2025-06-03 18:29:26] -rw-------. 1 boinc boinc       357 Jun  3 17:29 output.list
[2025-06-03 18:29:26] -rw-r--r--. 1 boinc boinc       620 Jun  3 17:29 runtime_log
[2025-06-03 18:29:26] -rw-------. 1 boinc boinc   2058240 Jun  3 17:29 result.tar.gz
[2025-06-03 18:29:26] -rw-r--r--. 1 boinc boinc      8673 Jun  3 17:29 runtime_log.err
[2025-06-03 18:29:26] -rw-------. 1 boinc boinc       656 Jun  3 17:29 pPRNDmEwce7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmV6cKDmUjRgSm.diag
[2025-06-03 18:29:26] -rw-r--r--. 1 boinc boinc      8192 Jun  3 18:29 boinc_mmap_file
[2025-06-03 18:29:26] -rw-r--r--. 1 boinc boinc        28 Jun  3 18:29 wrapper_checkpoint.txt
[2025-06-03 18:29:26] -rw-r--r--. 1 boinc boinc     20498 Jun  3 18:29 stderr.txt
[2025-06-03 18:29:26] HITS file was successfully produced:
[2025-06-03 18:29:26] -rw-------. 1 boinc boinc 198590330 Jun  3 17:26 shared/HITS.pool.root.1
[2025-06-03 18:29:26]  *** Contents of shared directory: ***
[2025-06-03 18:29:26] total 415816
[2025-06-03 18:29:26] -rw-r--r--. 2 boinc boinc 224613970 Jun  3 12:16 ATLAS.root_0
[2025-06-03 18:29:26] -rw-r--r--. 2 boinc boinc     15093 Jun  3 12:16 start_atlas.sh
[2025-06-03 18:29:26] -rw-r--r--. 2 boinc boinc    508878 Jun  3 12:16 input.tar.gz
[2025-06-03 18:29:26] -rw-------. 1 boinc boinc 198590330 Jun  3 17:26 HITS.pool.root.1
[2025-06-03 18:29:26] -rw-------. 1 boinc boinc   2058240 Jun  3 17:29 result.tar.gz
18:29:28 (12598): run_atlas exited; CPU time 71761.131182
18:29:28 (12598): called boinc_finish(0)

</stderr_txt>
]]>

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