Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:31:41 (4181379): wrapper (7.7.26015): starting
19:31:41 (4181379): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 19:31:41] Arguments: --nthreads 4
[2025-06-04 19:31:41] Threads: 4
[2025-06-04 19:31:41] Checking for CVMFS
[2025-06-04 19:31:41] No cvmfs_config command found, will try listing directly
[2025-06-04 19:31:41] CVMFS is ok
[2025-06-04 19:31:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 19:31:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 19:31:41] Further information can be found at the LHC@home message board.
[2025-06-04 19:31:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:31:41] Checking for apptainer binary...
[2025-06-04 19:31:41] which: no apptainer in ((null))
[2025-06-04 19:31:41] apptainer is not installed, using version from CVMFS
[2025-06-04 19:31:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:31:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-06-04 19:31:42] apptainer works
[2025-06-04 19:31:42] Set ATHENA_PROC_NUMBER=4
[2025-06-04 19:31:42] Set ATHENA_CORE_NUMBER=4
[2025-06-04 19:31:42] Starting ATLAS job with PandaID=6677400410
[2025-06-04 19:31:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 22:11:33]  *** The last 200 lines of the pilot log: ***
[2025-06-04 22:11:33] 2025-06-04 20:11:00,734 | WARNING  | process 4192267 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 22:11:33] 2025-06-04 20:11:00,735 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6677400410/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 22:11:33] 2025-06-04 20:11:01,120 | INFO     | number of running child processes to parent process 4192267: 1
[2025-06-04 22:11:33] 2025-06-04 20:11:01,120 | INFO     | maximum number of monitored processes: 6
[2025-06-04 22:11:33] 2025-06-04 20:11:03,622 | INFO     | monitor loop #696: job 0:6677400410 is in state 'finished'
[2025-06-04 22:11:33] 2025-06-04 20:11:03,623 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 22:11:33] 2025-06-04 20:11:04,973 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 22:11:33] 2025-06-04 20:11:04,973 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6677400410/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 22:11:33] 2025-06-04 20:11:04,974 | INFO     | extracted standard info from prmon json
[2025-06-04 22:11:33] 2025-06-04 20:11:04,974 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 22:11:33] 2025-06-04 20:11:04,974 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 22:11:33] 2025-06-04 20:11:04,975 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 22:11:33] 2025-06-04 20:11:04,975 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 22:11:33] 2025-06-04 20:11:04,979 | INFO     | fitting pss+swap vs Time
[2025-06-04 22:11:33] 2025-06-04 20:11:04,979 | INFO     | sum of square deviations: 1177156955.0
[2025-06-04 22:11:33] 2025-06-04 20:11:04,980 | INFO     | sum of deviations: -2359231089.4999986
[2025-06-04 22:11:33] 2025-06-04 20:11:04,980 | INFO     | mean x: 1749063069.5
[2025-06-04 22:11:33] 2025-06-04 20:11:04,980 | INFO     | mean y: 2347902.7884615385
[2025-06-04 22:11:33] 2025-06-04 20:11:04,981 | INFO     | -- intersect: 3507780167.8178067
[2025-06-04 22:11:33] 2025-06-04 20:11:04,981 | INFO     | intersect: 3507780167.8178067
[2025-06-04 22:11:33] 2025-06-04 20:11:04,981 | INFO     | chi2: 1.578236901883223
[2025-06-04 22:11:33] 2025-06-04 20:11:04,981 | INFO     | sum of square deviations: 1067554900.0
[2025-06-04 22:11:33] 2025-06-04 20:11:04,982 | INFO     | sum of deviations: -2195296243.000005
[2025-06-04 22:11:33] 2025-06-04 20:11:04,982 | INFO     | mean x: 1749062917.0
[2025-06-04 22:11:33] 2025-06-04 20:11:04,982 | INFO     | mean y: 2348131.013245033
[2025-06-04 22:11:33] 2025-06-04 20:11:04,983 | INFO     | -- intersect: 3599082360.2886944
[2025-06-04 22:11:33] 2025-06-04 20:11:04,983 | INFO     | intersect: 3599082360.2886944
[2025-06-04 22:11:33] 2025-06-04 20:11:04,983 | INFO     | chi2: 1.5780257610419983
[2025-06-04 22:11:33] 2025-06-04 20:11:04,983 | INFO     | current chi2=1.5780257610419983 (change=0.013378272993915004 %)
[2025-06-04 22:11:33] 2025-06-04 20:11:04,983 | INFO     | right removable region: 150
[2025-06-04 22:11:33] 2025-06-04 20:11:04,983 | INFO     | sum of square deviations: 1067554900.0
[2025-06-04 22:11:33] 2025-06-04 20:11:04,984 | INFO     | sum of deviations: -22417924743.0
[2025-06-04 22:11:33] 2025-06-04 20:11:04,984 | INFO     | mean x: 1749063222.0
[2025-06-04 22:11:33] 2025-06-04 20:11:04,984 | INFO     | mean y: 2375321.072847682
[2025-06-04 22:11:33] 2025-06-04 20:11:04,985 | INFO     | -- intersect: 36731509983.41677
[2025-06-04 22:11:33] 2025-06-04 20:11:04,985 | INFO     | intersect: 36731509983.41677
[2025-06-04 22:11:33] 2025-06-04 20:11:04,985 | INFO     | chi2: 0.16402238001092434
[2025-06-04 22:11:33] 2025-06-04 20:11:04,985 | INFO     | current chi2=0.16402238001092434 (change=89.60723958391763 %)
[2025-06-04 22:11:33] 2025-06-04 20:11:04,985 | INFO     | sum of square deviations: 964976232.5
[2025-06-04 22:11:33] 2025-06-04 20:11:04,986 | INFO     | sum of deviations: -17272616253.5
[2025-06-04 22:11:33] 2025-06-04 20:11:04,986 | INFO     | mean x: 1749063374.5
[2025-06-04 22:11:33] 2025-06-04 20:11:04,986 | INFO     | mean y: 2367629.4452054794
[2025-06-04 22:11:33] 2025-06-04 20:11:04,986 | INFO     | -- intersect: 31309771328.41689
[2025-06-04 22:11:33] 2025-06-04 20:11:04,987 | INFO     | intersect: 31309771328.41689
[2025-06-04 22:11:33] 2025-06-04 20:11:04,987 | INFO     | chi2: 0.1446934252472215
[2025-06-04 22:11:33] 2025-06-04 20:11:04,987 | INFO     | current chi2=0.1446934252472215 (change=11.784339894601866 %)
[2025-06-04 22:11:33] 2025-06-04 20:11:04,987 | INFO     | left removable region: 20
[2025-06-04 22:11:33] 2025-06-04 20:11:04,987 | INFO     | sum of square deviations: 681212772.5
[2025-06-04 22:11:33] 2025-06-04 20:11:04,988 | INFO     | sum of deviations: -4000525088.4999986
[2025-06-04 22:11:33] 2025-06-04 20:11:04,988 | INFO     | mean x: 1749063496.5
[2025-06-04 22:11:33] 2025-06-04 20:11:04,988 | INFO     | mean y: 2346270.9307692307
[2025-06-04 22:11:33] 2025-06-04 20:11:04,988 | INFO     | -- intersect: 10273986324.667107
[2025-06-04 22:11:33] 2025-06-04 20:11:04,988 | INFO     | intersect: 10273986324.667107
[2025-06-04 22:11:33] 2025-06-04 20:11:04,989 | INFO     | chi2: 0.023511826430335437
[2025-06-04 22:11:33] 2025-06-04 20:11:04,989 | INFO     | -- intersect: 10273986324.667107
[2025-06-04 22:11:33] 2025-06-04 20:11:04,989 | INFO     | current memory leak: -5.87 B/s (using 130 data points, chi2=0.02)
[2025-06-04 22:11:33] 2025-06-04 20:11:04,990 | INFO     | ..............................
[2025-06-04 22:11:33] 2025-06-04 20:11:04,990 | INFO     | . Timing measurements:
[2025-06-04 22:11:33] 2025-06-04 20:11:04,990 | INFO     | . get job = 0 s
[2025-06-04 22:11:33] 2025-06-04 20:11:04,990 | INFO     | . initial setup = 1 s
[2025-06-04 22:11:33] 2025-06-04 20:11:04,990 | INFO     | . payload setup = 8 s
[2025-06-04 22:11:33] 2025-06-04 20:11:04,990 | INFO     | . stage-in = 0 s
[2025-06-04 22:11:33] 2025-06-04 20:11:04,990 | INFO     | . payload execution = 9517 s
[2025-06-04 22:11:33] 2025-06-04 20:11:04,991 | INFO     | . stage-out = 0 s
[2025-06-04 22:11:33] 2025-06-04 20:11:04,991 | INFO     | . log creation = 0 s
[2025-06-04 22:11:33] 2025-06-04 20:11:04,991 | INFO     | ..............................
[2025-06-04 22:11:33] 2025-06-04 20:11:05,096 | INFO     | 
[2025-06-04 22:11:33] 2025-06-04 20:11:05,097 | INFO     | job summary report
[2025-06-04 22:11:33] 2025-06-04 20:11:05,097 | INFO     | --------------------------------------------------
[2025-06-04 22:11:33] 2025-06-04 20:11:05,097 | INFO     | PanDA job id: 6677400410
[2025-06-04 22:11:33] 2025-06-04 20:11:05,097 | INFO     | task id: 45006595
[2025-06-04 22:11:33] 2025-06-04 20:11:05,097 | INFO     | errors: (none)
[2025-06-04 22:11:33] 2025-06-04 20:11:05,097 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 22:11:33] 2025-06-04 20:11:05,097 | INFO     | pilot state: finished 
[2025-06-04 22:11:33] 2025-06-04 20:11:05,097 | INFO     | transexitcode: 0
[2025-06-04 22:11:33] 2025-06-04 20:11:05,097 | INFO     | exeerrorcode: 0
[2025-06-04 22:11:33] 2025-06-04 20:11:05,097 | INFO     | exeerrordiag: 
[2025-06-04 22:11:33] 2025-06-04 20:11:05,098 | INFO     | exitcode: 0
[2025-06-04 22:11:33] 2025-06-04 20:11:05,098 | INFO     | exitmsg: OK
[2025-06-04 22:11:33] 2025-06-04 20:11:05,098 | INFO     | cpuconsumptiontime: 36331 s
[2025-06-04 22:11:33] 2025-06-04 20:11:05,098 | INFO     | nevents: 400
[2025-06-04 22:11:33] 2025-06-04 20:11:05,098 | INFO     | neventsw: 0
[2025-06-04 22:11:33] 2025-06-04 20:11:05,098 | INFO     | pid: 4192267
[2025-06-04 22:11:33] 2025-06-04 20:11:05,098 | INFO     | pgrp: 4192267
[2025-06-04 22:11:33] 2025-06-04 20:11:05,098 | INFO     | corecount: 4
[2025-06-04 22:11:33] 2025-06-04 20:11:05,098 | INFO     | event service: False
[2025-06-04 22:11:33] 2025-06-04 20:11:05,098 | INFO     | sizes: {0: 2397180, 1: 2397379, 6: 2397585, 12: 2397613, 9529: 2425761, 9530: 2434724, 9532: 2434908, 9536: 2435078}
[2025-06-04 22:11:33] 2025-06-04 20:11:05,099 | INFO     | --------------------------------------------------
[2025-06-04 22:11:33] 2025-06-04 20:11:05,099 | INFO     | 
[2025-06-04 22:11:33] 2025-06-04 20:11:05,099 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-06-04 22:11:33] 2025-06-04 20:11:05,121 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,121 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,121 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,122 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,122 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,122 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,122 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,122 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,122 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,122 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,122 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,122 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,122 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,123 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,123 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,123 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,123 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,123 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 22:11:33] 2025-06-04 20:11:05,123 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,123 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 22:11:33] 2025-06-04 20:11:05,123 | INFO     | job 6677400410 has completed (purged errors)
[2025-06-04 22:11:33] 2025-06-04 20:11:05,123 | INFO     | overall cleanup function is called
[2025-06-04 22:11:33] 2025-06-04 20:11:06,131 | INFO     | --- collectZombieJob: --- 10, [4192267]
[2025-06-04 22:11:33] 2025-06-04 20:11:06,132 | INFO     | zombie collector waiting for pid 4192267
[2025-06-04 22:11:33] 2025-06-04 20:11:06,132 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 22:11:33] 2025-06-04 20:11:06,132 | INFO     | collected zombie processes
[2025-06-04 22:11:33] 2025-06-04 20:11:06,132 | INFO     | will attempt to kill all subprocesses of pid=4192267
[2025-06-04 22:11:33] 2025-06-04 20:11:06,510 | INFO     | process IDs to be killed: [4192267] (in reverse order)
[2025-06-04 22:11:33] 2025-06-04 20:11:06,624 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 22:11:33] 2025-06-04 20:11:06,625 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 22:11:33] 2025-06-04 20:11:06,637 | INFO     | did not find any defunct processes belonging to 4192267
[2025-06-04 22:11:33] 2025-06-04 20:11:06,648 | INFO     | did not find any defunct processes belonging to 4192267
[2025-06-04 22:11:33] 2025-06-04 20:11:06,649 | INFO     | ready for new job
[2025-06-04 22:11:33] 2025-06-04 20:11:06,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 22:11:33] 2025-06-04 20:11:06,651 | INFO     | **************************************
[2025-06-04 22:11:33] 2025-06-04 20:11:06,651 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 22:11:33] 2025-06-04 20:11:06,651 | INFO     | **************************************
[2025-06-04 22:11:33] 2025-06-04 20:11:06,651 | INFO     | 
[2025-06-04 22:11:33] 2025-06-04 20:11:06,655 | INFO     | architecture information:
[2025-06-04 22:11:33] 2025-06-04 20:11:06,656 | INFO     | executing command: cat /etc/os-release
[2025-06-04 22:11:33] 2025-06-04 20:11:06,672 | INFO     | cat /etc/os-release:
[2025-06-04 22:11:33] NAME="CentOS Linux"
[2025-06-04 22:11:33] VERSION="7 (Core)"
[2025-06-04 22:11:33] ID="centos"
[2025-06-04 22:11:33] ID_LIKE="rhel fedora"
[2025-06-04 22:11:33] VERSION_ID="7"
[2025-06-04 22:11:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 22:11:33] ANSI_COLOR="0;31"
[2025-06-04 22:11:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 22:11:33] HOME_URL="https://www.centos.org/"
[2025-06-04 22:11:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 22:11:33] 
[2025-06-04 22:11:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 22:11:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 22:11:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 22:11:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 22:11:33] 
[2025-06-04 22:11:33] 2025-06-04 20:11:06,672 | INFO     | **************************************
[2025-06-04 22:11:33] 2025-06-04 20:11:07,175 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-06-04 22:11:33] 2025-06-04 20:11:07,194 | INFO     | sufficient remaining disk space (651424694272 B)
[2025-06-04 22:11:33] 2025-06-04 20:11:07,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 22:11:33] 2025-06-04 20:11:07,194 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 22:11:33] 2025-06-04 20:11:07,195 | INFO     | update_server=False
[2025-06-04 22:11:33] 2025-06-04 20:11:07,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 22:11:33] 2025-06-04 20:11:07,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 22:11:33] 2025-06-04 20:11:07,195 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 22:11:33] 2025-06-04 20:11:07,196 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 22:11:33] 2025-06-04 20:11:07,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:11:33] 2025-06-04 20:11:07,197 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 22:11:33] 2025-06-04 20:11:07,197 | INFO     | aborting loop
[2025-06-04 22:11:33] 2025-06-04 20:11:07,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 22:11:33] 2025-06-04 20:11:07,197 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 22:11:33] 2025-06-04 20:11:07,606 | INFO     | all payload control threads have been joined
[2025-06-04 22:11:33] 2025-06-04 20:11:07,908 | INFO     | all data control threads have been joined
[2025-06-04 22:11:33] 2025-06-04 20:11:08,200 | INFO     | [job] retrieve thread has finished
[2025-06-04 22:11:33] 2025-06-04 20:11:08,203 | INFO     | [job] job monitor thread has finished
[2025-06-04 22:11:33] 2025-06-04 20:11:08,311 | INFO     | all job control threads have been joined
[2025-06-04 22:11:33] 2025-06-04 20:11:08,612 | INFO     | [payload] control thread has finished
[2025-06-04 22:11:33] 2025-06-04 20:11:08,670 | INFO     | [job] validate thread has finished
[2025-06-04 22:11:33] 2025-06-04 20:11:08,805 | INFO     | [payload] failed_post thread has finished
[2025-06-04 22:11:33] 2025-06-04 20:11:08,914 | INFO     | [data] control thread has finished
[2025-06-04 22:11:33] 2025-06-04 20:11:08,991 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 22:11:33] 2025-06-04 20:11:09,007 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 22:11:33] 2025-06-04 20:11:09,197 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 22:11:33] 2025-06-04 20:11:09,202 | INFO     | [data] copytool_out thread has finished
[2025-06-04 22:11:33] 2025-06-04 20:11:09,316 | INFO     | [job] control thread has finished
[2025-06-04 22:11:33] 2025-06-04 20:11:09,621 | INFO     | [data] copytool_in thread has finished
[2025-06-04 22:11:33] 2025-06-04 20:11:09,776 | INFO     | [payload] validate_post thread has finished
[2025-06-04 22:11:33] 2025-06-04 20:11:10,110 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:11:33] 2025-06-04 20:11:11,115 | INFO     | [job] queue monitor thread has finished
[2025-06-04 22:11:33] 2025-06-04 20:11:11,203 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 22:11:33] 2025-06-04 20:11:17,569 | INFO     | job.realtimelogging is not enabled
[2025-06-04 22:11:33] 2025-06-04 20:11:18,570 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 22:11:33] 2025-06-04 20:11:19,158 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22525834770240)>', '<ExcThread(monitor, started 22525587175168)>']
[2025-06-04 22:11:33] 2025-06-04 20:11:19,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 22:11:33] 2025-06-04 20:11:19,253 | INFO     | [monitor] control thread has ended
[2025-06-04 22:11:33] 2025-06-04 20:11:24,182 | INFO     | all workflow threads have been joined
[2025-06-04 22:11:33] 2025-06-04 20:11:24,183 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 22:11:33] 2025-06-04 20:11:24,183 | INFO     | traces error code: 0
[2025-06-04 22:11:33] 2025-06-04 20:11:24,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 22:11:33] 2025-06-04 20:11:24,328 [wrapper] ==== pilot stdout END ====
[2025-06-04 22:11:33] 2025-06-04 20:11:24,332 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 22:11:33] 2025-06-04 20:11:24,335 [wrapper] pilotpid: 4185173
[2025-06-04 22:11:33] 2025-06-04 20:11:24,338 [wrapper] Pilot exit status: 0
[2025-06-04 22:11:33] 2025-06-04 20:11:24,349 [wrapper] pandaids: 6677400410
[2025-06-04 22:11:33] 2025-06-04 20:11:24,425 [wrapper] cleanup supervisor_pilot  239520 4185174
[2025-06-04 22:11:33] 2025-06-04 20:11:24,428 [wrapper] Test setup, not cleaning
[2025-06-04 22:11:33] 2025-06-04 20:11:24,431 [wrapper] apfmon messages muted
[2025-06-04 22:11:33] 2025-06-04 20:11:24,434 [wrapper] ==== wrapper stdout END ====
[2025-06-04 22:11:33] 2025-06-04 20:11:24,437 [wrapper] ==== wrapper stderr END ====
[2025-06-04 22:11:33]  *** Error codes and diagnostics ***
[2025-06-04 22:11:33]     "exeErrorCode": 0,
[2025-06-04 22:11:33]     "exeErrorDiag": "",
[2025-06-04 22:11:33]     "pilotErrorCode": 0,
[2025-06-04 22:11:33]     "pilotErrorDiag": "",
[2025-06-04 22:11:33]  *** Listing of results directory ***
[2025-06-04 22:11:33] total 389428
[2025-06-04 22:11:33] -rw-r--r-- 1 boinc boinc    495897 Jun  2 22:47 pilot3.tar.gz
[2025-06-04 22:11:33] -rwx------ 1 boinc boinc     37140 Jun  2 22:49 runpilot2-wrapper.sh
[2025-06-04 22:11:33] -rw-r--r-- 1 boinc boinc      5111 Jun  2 22:49 queuedata.json
[2025-06-04 22:11:33] -rw-r--r-- 1 boinc boinc       100 Jun  4 19:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 22:11:33] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 19:31 run_atlas
[2025-06-04 22:11:33] -rw-r--r-- 1 boinc boinc       105 Jun  4 19:31 job.xml
[2025-06-04 22:11:33] -rw-r--r-- 2 boinc boinc 216193892 Jun  4 19:31 EVNT.45006593._000464.pool.root.1
[2025-06-04 22:11:33] -rw-r--r-- 1 boinc boinc      6633 Jun  4 19:31 init_data.xml
[2025-06-04 22:11:33] -rw-r--r-- 2 boinc boinc     15093 Jun  4 19:31 start_atlas.sh
[2025-06-04 22:11:33] drwxrwx--x 2 boinc boinc      4096 Jun  4 19:31 shared
[2025-06-04 22:11:33] -rw-r--r-- 2 boinc boinc    508874 Jun  4 19:31 input.tar.gz
[2025-06-04 22:11:33] -rw-r--r-- 1 boinc boinc         0 Jun  4 19:31 boinc_lockfile
[2025-06-04 22:11:33] -rw-r--r-- 1 boinc boinc      2524 Jun  4 19:31 pandaJob.out
[2025-06-04 22:11:33] -rw------- 1 boinc boinc    990984 Jun  4 19:31 agis_schedconf.cvmfs.json
[2025-06-04 22:11:33] -rw------- 1 boinc boinc   1598969 Jun  4 19:31 agis_ddmendpoints.agis.ALL.json
[2025-06-04 22:11:33] drwx------ 4 boinc boinc      4096 Jun  4 19:31 pilot3
[2025-06-04 22:11:33] -rw------- 1 boinc boinc 176359776 Jun  4 22:10 HITS.45006595._011589.pool.root.1
[2025-06-04 22:11:33] -rw------- 1 boinc boinc        95 Jun  4 22:10 pilot_heartbeat.json
[2025-06-04 22:11:33] -rw-r--r-- 1 boinc boinc       529 Jun  4 22:10 boinc_task_state.xml
[2025-06-04 22:11:33] -rw------- 1 boinc boinc      1034 Jun  4 22:10 memory_monitor_summary.json
[2025-06-04 22:11:33] -rw------- 1 boinc boinc    291247 Jun  4 22:10 log.45006595._011589.job.log.tgz.1
[2025-06-04 22:11:33] -rw------- 1 boinc boinc      7720 Jun  4 22:11 heartbeat.json
[2025-06-04 22:11:33] -rw-r--r-- 1 boinc boinc        26 Jun  4 22:11 wrapper_checkpoint.txt
[2025-06-04 22:11:33] -rw------- 1 boinc boinc      4558 Jun  4 22:11 pilotlog.txt
[2025-06-04 22:11:33] -rw------- 1 boinc boinc    902452 Jun  4 22:11 log.45006595._011589.job.log.1
[2025-06-04 22:11:33] -rw------- 1 boinc boinc       357 Jun  4 22:11 output.list
[2025-06-04 22:11:33] -rw-r--r-- 1 boinc boinc       620 Jun  4 22:11 runtime_log
[2025-06-04 22:11:33] -rw------- 1 boinc boinc   1208320 Jun  4 22:11 result.tar.gz
[2025-06-04 22:11:33] -rw-r--r-- 1 boinc boinc      9025 Jun  4 22:11 runtime_log.err
[2025-06-04 22:11:33] -rw------- 1 boinc boinc       662 Jun  4 22:11 kkHMDmIHRg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm1aWKDmIa5Tin.diag
[2025-06-04 22:11:33] -rw-r--r-- 1 boinc boinc      8192 Jun  4 22:11 boinc_mmap_file
[2025-06-04 22:11:33] -rw-r--r-- 1 boinc boinc     20889 Jun  4 22:11 stderr.txt
[2025-06-04 22:11:33] HITS file was successfully produced:
[2025-06-04 22:11:33] -rw------- 1 boinc boinc 176359776 Jun  4 22:10 shared/HITS.pool.root.1
[2025-06-04 22:11:33]  *** Contents of shared directory: ***
[2025-06-04 22:11:33] total 385060
[2025-06-04 22:11:33] -rw-r--r-- 2 boinc boinc 216193892 Jun  4 19:31 ATLAS.root_0
[2025-06-04 22:11:33] -rw-r--r-- 2 boinc boinc     15093 Jun  4 19:31 start_atlas.sh
[2025-06-04 22:11:33] -rw-r--r-- 2 boinc boinc    508874 Jun  4 19:31 input.tar.gz
[2025-06-04 22:11:33] -rw------- 1 boinc boinc 176359776 Jun  4 22:10 HITS.pool.root.1
[2025-06-04 22:11:33] -rw------- 1 boinc boinc   1208320 Jun  4 22:11 result.tar.gz
22:11:35 (4181379): run_atlas exited; CPU time 36678.422226
22:11:35 (4181379): called boinc_finish(0)

</stderr_txt>
]]>

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