Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:13:49 (11699): wrapper (7.7.26015): starting
11:13:49 (11699): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:13:49] Arguments: --nthreads 8
[2025-06-03 11:13:49] Threads: 8
[2025-06-03 11:13:49] Checking for CVMFS
[2025-06-03 11:13:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:13:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:13:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:13:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:13:52] 2.11.2.0 24901 31561 91492 146735 3 59 24017857 25165824 4635 130560 0 16178143 99.796 18129481 2092 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 11:13:52] CVMFS is ok
[2025-06-03 11:13:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:13:52] Checking for apptainer binary...
[2025-06-03 11:13:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:13:52] Running /usr/bin/apptainer --version
[2025-06-03 11:13:52] apptainer version 1.3.2-1.el7
[2025-06-03 11:13:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:14:00] cg-vwn281.simple-grid.lan
[2025-06-03 11:14:00] apptainer works
[2025-06-03 11:14:00] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:14:00] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:14:00] Starting ATLAS job with PandaID=6677402722
[2025-06-03 11:14:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:08:22]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:08:22] 2025-06-03 13:08:09,098 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6677402722/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:08:22] 2025-06-03 13:08:09,099 | INFO     | extracted standard info from prmon json
[2025-06-03 15:08:22] 2025-06-03 13:08:09,099 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:08:22] 2025-06-03 13:08:09,099 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:08:22] 2025-06-03 13:08:09,099 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:08:22] 2025-06-03 13:08:09,100 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:08:22] 2025-06-03 13:08:09,105 | INFO     | fitting pss+swap vs Time
[2025-06-03 15:08:22] 2025-06-03 13:08:09,105 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 15:08:22] 2025-06-03 13:08:09,107 | INFO     | sum of deviations: 100852223113.00002
[2025-06-03 15:08:22] 2025-06-03 13:08:09,107 | INFO     | mean x: 1748949395.0
[2025-06-03 15:08:22] 2025-06-03 13:08:09,107 | INFO     | mean y: 2407893.02739726
[2025-06-03 15:08:22] 2025-06-03 13:08:09,107 | INFO     | -- intersect: -54155391126.267166
[2025-06-03 15:08:22] 2025-06-03 13:08:09,107 | INFO     | intersect: -54155391126.267166
[2025-06-03 15:08:22] 2025-06-03 13:08:09,108 | INFO     | chi2: 7.099563904171071
[2025-06-03 15:08:22] 2025-06-03 13:08:09,108 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 15:08:22] 2025-06-03 13:08:09,110 | INFO     | sum of deviations: 112670417403.00002
[2025-06-03 15:08:22] 2025-06-03 13:08:09,110 | INFO     | mean x: 1748949242.5
[2025-06-03 15:08:22] 2025-06-03 13:08:09,110 | INFO     | mean y: 2415971.3925233646
[2025-06-03 15:08:22] 2025-06-03 13:08:09,110 | INFO     | -- intersect: -64842636832.391716
[2025-06-03 15:08:22] 2025-06-03 13:08:09,110 | INFO     | intersect: -64842636832.391716
[2025-06-03 15:08:22] 2025-06-03 13:08:09,111 | INFO     | chi2: 6.387289114664763
[2025-06-03 15:08:22] 2025-06-03 13:08:09,111 | INFO     | current chi2=6.387289114664763 (change=10.032655514063885 %)
[2025-06-03 15:08:22] 2025-06-03 13:08:09,111 | INFO     | right removable region: 213
[2025-06-03 15:08:22] 2025-06-03 13:08:09,111 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 15:08:22] 2025-06-03 13:08:09,113 | INFO     | sum of deviations: 25649599853.49999
[2025-06-03 15:08:22] 2025-06-03 13:08:09,113 | INFO     | mean x: 1748949547.5
[2025-06-03 15:08:22] 2025-06-03 13:08:09,113 | INFO     | mean y: 2460451.359813084
[2025-06-03 15:08:22] 2025-06-03 13:08:09,113 | INFO     | -- intersect: -14759621604.321556
[2025-06-03 15:08:22] 2025-06-03 13:08:09,113 | INFO     | intersect: -14759621604.321556
[2025-06-03 15:08:22] 2025-06-03 13:08:09,114 | INFO     | chi2: 2.2169212399899743
[2025-06-03 15:08:22] 2025-06-03 13:08:09,114 | INFO     | current chi2=2.2169212399899743 (change=68.77383921162384 %)
[2025-06-03 15:08:22] 2025-06-03 13:08:09,114 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 15:08:22] 2025-06-03 13:08:09,116 | INFO     | sum of deviations: -10948698155.000002
[2025-06-03 15:08:22] 2025-06-03 13:08:09,117 | INFO     | mean x: 1748949700.0
[2025-06-03 15:08:22] 2025-06-03 13:08:09,117 | INFO     | mean y: 2487091.5263157897
[2025-06-03 15:08:22] 2025-06-03 13:08:09,117 | INFO     | -- intersect: 6766936645.557133
[2025-06-03 15:08:22] 2025-06-03 13:08:09,117 | INFO     | intersect: 6766936645.557133
[2025-06-03 15:08:22] 2025-06-03 13:08:09,117 | INFO     | chi2: 0.8575817679991592
[2025-06-03 15:08:22] 2025-06-03 13:08:09,117 | INFO     | current chi2=0.8575817679991592 (change=61.31654329754009 %)
[2025-06-03 15:08:22] 2025-06-03 13:08:09,118 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 15:08:22] 2025-06-03 13:08:09,119 | INFO     | sum of deviations: -10118682440.0
[2025-06-03 15:08:22] 2025-06-03 13:08:09,119 | INFO     | mean x: 1748949852.5
[2025-06-03 15:08:22] 2025-06-03 13:08:09,120 | INFO     | mean y: 2486404.705882353
[2025-06-03 15:08:22] 2025-06-03 13:08:09,120 | INFO     | -- intersect: 6725172502.464845
[2025-06-03 15:08:22] 2025-06-03 13:08:09,120 | INFO     | intersect: 6725172502.464845
[2025-06-03 15:08:22] 2025-06-03 13:08:09,120 | INFO     | chi2: 0.8378612356381356
[2025-06-03 15:08:22] 2025-06-03 13:08:09,120 | INFO     | current chi2=0.8378612356381356 (change=2.2995512611041065 %)
[2025-06-03 15:08:22] 2025-06-03 13:08:09,120 | INFO     | left removable region: 30
[2025-06-03 15:08:22] 2025-06-03 13:08:09,121 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 15:08:22] 2025-06-03 13:08:09,122 | INFO     | sum of deviations: 6095360828.0
[2025-06-03 15:08:22] 2025-06-03 13:08:09,122 | INFO     | mean x: 1748950127.0
[2025-06-03 15:08:22] 2025-06-03 13:08:09,122 | INFO     | mean y: 2494806.12568306
[2025-06-03 15:08:22] 2025-06-03 13:08:09,122 | INFO     | -- intersect: -5607443953.437888
[2025-06-03 15:08:22] 2025-06-03 13:08:09,122 | INFO     | intersect: -5607443953.437888
[2025-06-03 15:08:22] 2025-06-03 13:08:09,123 | INFO     | chi2: 0.000446312665576383
[2025-06-03 15:08:22] 2025-06-03 13:08:09,123 | INFO     | -- intersect: -5607443953.437888
[2025-06-03 15:08:22] 2025-06-03 13:08:09,123 | INFO     | current memory leak: 3.21 B/s (using 183 data points, chi2=0.00)
[2025-06-03 15:08:22] 2025-06-03 13:08:09,124 | INFO     | ..............................
[2025-06-03 15:08:22] 2025-06-03 13:08:09,124 | INFO     | . Timing measurements:
[2025-06-03 15:08:22] 2025-06-03 13:08:09,124 | INFO     | . get job = 0 s
[2025-06-03 15:08:22] 2025-06-03 13:08:09,124 | INFO     | . initial setup = 6 s
[2025-06-03 15:08:22] 2025-06-03 13:08:09,124 | INFO     | . payload setup = 180 s
[2025-06-03 15:08:22] 2025-06-03 13:08:09,124 | INFO     | . stage-in = 0 s
[2025-06-03 15:08:22] 2025-06-03 13:08:09,124 | INFO     | . payload execution = 13478 s
[2025-06-03 15:08:22] 2025-06-03 13:08:09,124 | INFO     | . stage-out = 2 s
[2025-06-03 15:08:22] 2025-06-03 13:08:09,125 | INFO     | . log creation = 0 s
[2025-06-03 15:08:22] 2025-06-03 13:08:09,125 | INFO     | ..............................
[2025-06-03 15:08:22] 2025-06-03 13:08:09,276 | INFO     | 
[2025-06-03 15:08:22] 2025-06-03 13:08:09,276 | INFO     | job summary report
[2025-06-03 15:08:22] 2025-06-03 13:08:09,276 | INFO     | --------------------------------------------------
[2025-06-03 15:08:22] 2025-06-03 13:08:09,276 | INFO     | PanDA job id: 6677402722
[2025-06-03 15:08:22] 2025-06-03 13:08:09,276 | INFO     | task id: 45006595
[2025-06-03 15:08:22] 2025-06-03 13:08:09,276 | INFO     | errors: (none)
[2025-06-03 15:08:22] 2025-06-03 13:08:09,276 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:08:22] 2025-06-03 13:08:09,277 | INFO     | pilot state: finished 
[2025-06-03 15:08:22] 2025-06-03 13:08:09,277 | INFO     | transexitcode: 0
[2025-06-03 15:08:22] 2025-06-03 13:08:09,277 | INFO     | exeerrorcode: 0
[2025-06-03 15:08:22] 2025-06-03 13:08:09,277 | INFO     | exeerrordiag: 
[2025-06-03 15:08:22] 2025-06-03 13:08:09,277 | INFO     | exitcode: 0
[2025-06-03 15:08:22] 2025-06-03 13:08:09,277 | INFO     | exitmsg: OK
[2025-06-03 15:08:22] 2025-06-03 13:08:09,277 | INFO     | cpuconsumptiontime: 49721 s
[2025-06-03 15:08:22] 2025-06-03 13:08:09,277 | INFO     | nevents: 400
[2025-06-03 15:08:22] 2025-06-03 13:08:09,277 | INFO     | neventsw: 0
[2025-06-03 15:08:22] 2025-06-03 13:08:09,277 | INFO     | pid: 27914
[2025-06-03 15:08:22] 2025-06-03 13:08:09,278 | INFO     | pgrp: 27914
[2025-06-03 15:08:22] 2025-06-03 13:08:09,278 | INFO     | corecount: 8
[2025-06-03 15:08:22] 2025-06-03 13:08:09,278 | INFO     | event service: False
[2025-06-03 15:08:22] 2025-06-03 13:08:09,278 | INFO     | sizes: {0: 2404354, 1: 2405039, 2: 2405238, 13: 2405238, 24: 2405294, 34: 2405322, 45: 2405478, 56: 2405506, 67: 2405534, 77: 2405562, 88: 2405618, 89: 2406132, 99
[2025-06-03 15:08:22] 2025-06-03 13:08:09,278 | INFO     | --------------------------------------------------
[2025-06-03 15:08:22] 2025-06-03 13:08:09,278 | INFO     | 
[2025-06-03 15:08:22] 2025-06-03 13:08:09,278 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-03 15:08:22] 2025-06-03 13:08:09,356 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,357 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,357 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,357 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,357 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,357 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,357 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,357 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,357 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,358 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,358 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,358 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,358 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,358 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,358 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,358 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,358 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,359 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:08:22] 2025-06-03 13:08:09,359 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,359 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:08:22] 2025-06-03 13:08:09,359 | INFO     | job 6677402722 has completed (purged errors)
[2025-06-03 15:08:22] 2025-06-03 13:08:09,359 | INFO     | overall cleanup function is called
[2025-06-03 15:08:22] 2025-06-03 13:08:10,369 | INFO     | --- collectZombieJob: --- 10, [27914]
[2025-06-03 15:08:22] 2025-06-03 13:08:10,369 | INFO     | zombie collector waiting for pid 27914
[2025-06-03 15:08:22] 2025-06-03 13:08:10,369 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:08:22] 2025-06-03 13:08:10,369 | INFO     | collected zombie processes
[2025-06-03 15:08:22] 2025-06-03 13:08:10,370 | INFO     | will attempt to kill all subprocesses of pid=27914
[2025-06-03 15:08:22] 2025-06-03 13:08:10,483 | INFO     | process IDs to be killed: [27914] (in reverse order)
[2025-06-03 15:08:22] 2025-06-03 13:08:10,613 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:08:22] 2025-06-03 13:08:10,614 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:08:22] 2025-06-03 13:08:10,617 | INFO     | did not find any defunct processes belonging to 27914
[2025-06-03 15:08:22] 2025-06-03 13:08:10,619 | INFO     | did not find any defunct processes belonging to 27914
[2025-06-03 15:08:22] 2025-06-03 13:08:10,620 | INFO     | ready for new job
[2025-06-03 15:08:22] 2025-06-03 13:08:10,620 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:08:22] 2025-06-03 13:08:10,622 | INFO     | **************************************
[2025-06-03 15:08:22] 2025-06-03 13:08:10,622 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 15:08:22] 2025-06-03 13:08:10,622 | INFO     | **************************************
[2025-06-03 15:08:22] 2025-06-03 13:08:10,622 | INFO     | 
[2025-06-03 15:08:22] 2025-06-03 13:08:10,623 | INFO     | pilot is running in a VM
[2025-06-03 15:08:22] 2025-06-03 13:08:10,623 | INFO     | architecture information:
[2025-06-03 15:08:22] 2025-06-03 13:08:10,624 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:08:22] 2025-06-03 13:08:10,670 | INFO     | cat /etc/os-release:
[2025-06-03 15:08:22] NAME="CentOS Linux"
[2025-06-03 15:08:22] VERSION="7 (Core)"
[2025-06-03 15:08:22] ID="centos"
[2025-06-03 15:08:22] ID_LIKE="rhel fedora"
[2025-06-03 15:08:22] VERSION_ID="7"
[2025-06-03 15:08:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:08:22] ANSI_COLOR="0;31"
[2025-06-03 15:08:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:08:22] HOME_URL="https://www.centos.org/"
[2025-06-03 15:08:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:08:22] 
[2025-06-03 15:08:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:08:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:08:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:08:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:08:22] 
[2025-06-03 15:08:22] 2025-06-03 13:08:10,671 | INFO     | **************************************
[2025-06-03 15:08:22] 2025-06-03 13:08:11,174 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-03 15:08:22] 2025-06-03 13:08:11,210 | INFO     | sufficient remaining disk space (496760782848 B)
[2025-06-03 15:08:22] 2025-06-03 13:08:11,210 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:08:22] 2025-06-03 13:08:11,210 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:08:22] 2025-06-03 13:08:11,211 | INFO     | update_server=False
[2025-06-03 15:08:22] 2025-06-03 13:08:11,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:08:22] 2025-06-03 13:08:11,211 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:08:22] 2025-06-03 13:08:11,333 | INFO     | all data control threads have been joined
[2025-06-03 15:08:22] 2025-06-03 13:08:11,654 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:08:22] 2025-06-03 13:08:11,887 | INFO     | all job control threads have been joined
[2025-06-03 15:08:22] 2025-06-03 13:08:11,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:08:22] 2025-06-03 13:08:11,897 | INFO     | aborting loop
[2025-06-03 15:08:22] 2025-06-03 13:08:12,049 | INFO     | all payload control threads have been joined
[2025-06-03 15:08:22] 2025-06-03 13:08:12,067 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:08:22] 2025-06-03 13:08:12,069 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:08:22] 2025-06-03 13:08:12,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:08:22] 2025-06-03 13:08:12,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:08:22] 2025-06-03 13:08:12,215 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:08:22] 2025-06-03 13:08:12,216 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:08:22] 2025-06-03 13:08:12,290 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:08:22] 2025-06-03 13:08:12,339 | INFO     | [data] control thread has finished
[2025-06-03 15:08:22] 2025-06-03 13:08:12,344 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:08:22] 2025-06-03 13:08:12,453 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:08:22] 2025-06-03 13:08:12,534 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:08:22] 2025-06-03 13:08:12,827 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:08:22] 2025-06-03 13:08:12,842 | INFO     | [job] validate thread has finished
[2025-06-03 15:08:22] 2025-06-03 13:08:12,891 | INFO     | [job] control thread has finished
[2025-06-03 15:08:22] 2025-06-03 13:08:12,902 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:08:22] 2025-06-03 13:08:13,054 | INFO     | [payload] control thread has finished
[2025-06-03 15:08:22] 2025-06-03 13:08:13,184 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:08:22] 2025-06-03 13:08:13,434 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:08:22] 2025-06-03 13:08:13,662 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:08:22] 2025-06-03 13:08:16,075 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:08:22] 2025-06-03 13:08:16,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140592324233024)>', '<ExcThread(monitor, started 140591660791552)>']
[2025-06-03 15:08:22] 2025-06-03 13:08:17,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:08:22] 2025-06-03 13:08:17,099 | INFO     | [monitor] control thread has ended
[2025-06-03 15:08:22] 2025-06-03 13:08:21,850 | INFO     | all workflow threads have been joined
[2025-06-03 15:08:22] 2025-06-03 13:08:21,850 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:08:22] 2025-06-03 13:08:21,851 | INFO     | traces error code: 0
[2025-06-03 15:08:22] 2025-06-03 13:08:21,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:08:22] 2025-06-03 13:08:22,062 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:08:22] 2025-06-03 13:08:22,070 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:08:22] 2025-06-03 13:08:22,077 [wrapper] pilotpid: 17229
[2025-06-03 15:08:22] 2025-06-03 13:08:22,082 [wrapper] Pilot exit status: 0
[2025-06-03 15:08:22] 2025-06-03 13:08:22,123 [wrapper] pandaids: 6677402722
[2025-06-03 15:08:22] 2025-06-03 13:08:22,182 [wrapper] cleanup supervisor_pilot  8763 17230
[2025-06-03 15:08:22] 2025-06-03 13:08:22,194 [wrapper] Test setup, not cleaning
[2025-06-03 15:08:22] 2025-06-03 13:08:22,206 [wrapper] apfmon messages muted
[2025-06-03 15:08:22] 2025-06-03 13:08:22,216 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:08:22] 2025-06-03 13:08:22,223 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:08:22]  *** Error codes and diagnostics ***
[2025-06-03 15:08:22]     "exeErrorCode": 0,
[2025-06-03 15:08:22]     "exeErrorDiag": "",
[2025-06-03 15:08:22]     "pilotErrorCode": 0,
[2025-06-03 15:08:22]     "pilotErrorDiag": "",
[2025-06-03 15:08:22]  *** Listing of results directory ***
[2025-06-03 15:08:22] total 393296
[2025-06-03 15:08:22] -rw-r--r--. 1 boinc boinc    495897 Jun  2 23:29 pilot3.tar.gz
[2025-06-03 15:08:22] -rwx------. 1 boinc boinc     37140 Jun  3 00:12 runpilot2-wrapper.sh
[2025-06-03 15:08:22] -rw-r--r--. 1 boinc boinc      5111 Jun  3 00:12 queuedata.json
[2025-06-03 15:08:22] -rw-r--r--. 1 boinc boinc       100 Jun  3 11:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:08:22] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 11:13 run_atlas
[2025-06-03 15:08:22] -rw-r--r--. 1 boinc boinc       105 Jun  3 11:13 job.xml
[2025-06-03 15:08:22] -rw-r--r--. 2 boinc boinc 215004289 Jun  3 11:13 EVNT.45006593._000518.pool.root.1
[2025-06-03 15:08:22] -rw-r--r--. 1 boinc boinc      6390 Jun  3 11:13 init_data.xml
[2025-06-03 15:08:22] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:13 start_atlas.sh
[2025-06-03 15:08:22] drwxrwx--x. 2 boinc boinc        68 Jun  3 11:13 shared
[2025-06-03 15:08:22] -rw-r--r--. 2 boinc boinc    508883 Jun  3 11:13 input.tar.gz
[2025-06-03 15:08:22] -rw-r--r--. 1 boinc boinc         0 Jun  3 11:13 boinc_lockfile
[2025-06-03 15:08:22] -rw-r--r--. 1 boinc boinc      2524 Jun  3 11:14 pandaJob.out
[2025-06-03 15:08:22] -rw-------. 1 boinc boinc    985498 Jun  3 11:17 agis_schedconf.cvmfs.json
[2025-06-03 15:08:22] drwx------. 4 boinc boinc      4096 Jun  3 11:17 pilot3
[2025-06-03 15:08:22] -rw-------. 1 boinc boinc 180728067 Jun  3 15:07 HITS.45006595._012947.pool.root.1
[2025-06-03 15:08:22] -rw-------. 1 boinc boinc        95 Jun  3 15:07 pilot_heartbeat.json
[2025-06-03 15:08:22] -rw-r--r--. 1 boinc boinc       531 Jun  3 15:07 boinc_task_state.xml
[2025-06-03 15:08:22] -rw-------. 1 boinc boinc      1032 Jun  3 15:07 memory_monitor_summary.json
[2025-06-03 15:08:22] -rw-------. 1 boinc boinc   1603667 Jun  3 15:07 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:08:22] -rw-------. 1 boinc boinc    393450 Jun  3 15:07 log.45006595._012947.job.log.tgz.1
[2025-06-03 15:08:22] -rw-------. 1 boinc boinc      7687 Jun  3 15:08 heartbeat.json
[2025-06-03 15:08:22] -rw-r--r--. 1 boinc boinc      8192 Jun  3 15:08 boinc_mmap_file
[2025-06-03 15:08:22] -rw-r--r--. 1 boinc boinc        28 Jun  3 15:08 wrapper_checkpoint.txt
[2025-06-03 15:08:22] -rw-------. 1 boinc boinc      4416 Jun  3 15:08 pilotlog.txt
[2025-06-03 15:08:22] -rw-------. 1 boinc boinc   1192030 Jun  3 15:08 log.45006595._012947.job.log.1
[2025-06-03 15:08:22] -rw-------. 1 boinc boinc       357 Jun  3 15:08 output.list
[2025-06-03 15:08:22] -rw-r--r--. 1 boinc boinc       620 Jun  3 15:08 runtime_log
[2025-06-03 15:08:22] -rw-------. 1 boinc boinc   1607680 Jun  3 15:08 result.tar.gz
[2025-06-03 15:08:22] -rw-r--r--. 1 boinc boinc      8659 Jun  3 15:08 runtime_log.err
[2025-06-03 15:08:22] -rw-------. 1 boinc boinc       656 Jun  3 15:08 1bqNDmPZSg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFtgKDmYsGMVm.diag
[2025-06-03 15:08:22] -rw-r--r--. 1 boinc boinc     20531 Jun  3 15:08 stderr.txt
[2025-06-03 15:08:22] HITS file was successfully produced:
[2025-06-03 15:08:22] -rw-------. 1 boinc boinc 180728067 Jun  3 15:07 shared/HITS.pool.root.1
[2025-06-03 15:08:22]  *** Contents of shared directory: ***
[2025-06-03 15:08:22] total 388552
[2025-06-03 15:08:22] -rw-r--r--. 2 boinc boinc 215004289 Jun  3 11:13 ATLAS.root_0
[2025-06-03 15:08:22] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:13 start_atlas.sh
[2025-06-03 15:08:22] -rw-r--r--. 2 boinc boinc    508883 Jun  3 11:13 input.tar.gz
[2025-06-03 15:08:22] -rw-------. 1 boinc boinc 180728067 Jun  3 15:07 HITS.pool.root.1
[2025-06-03 15:08:22] -rw-------. 1 boinc boinc   1607680 Jun  3 15:08 result.tar.gz
15:08:24 (11699): run_atlas exited; CPU time 49914.345438
15:08:24 (11699): called boinc_finish(0)

</stderr_txt>
]]>

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