Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:08:27 (24209): wrapper (7.7.26015): starting
11:08:27 (24209): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:08:27] Arguments: --nthreads 8
[2025-06-03 11:08:27] Threads: 8
[2025-06-03 11:08:27] Checking for CVMFS
[2025-06-03 11:08:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:08:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:08:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:08:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:08:29] 2.11.2.0 21130 31556 91220 146735 0 263 13490486 25165825 3972 130560 0 15688756 99.787 18462603 2039 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 11:08:29] CVMFS is ok
[2025-06-03 11:08:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:08:29] Checking for apptainer binary...
[2025-06-03 11:08:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:08:29] Running /usr/bin/apptainer --version
[2025-06-03 11:08:29] apptainer version 1.3.2-1.el7
[2025-06-03 11:08:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:08:30] cg-vwn411.simple-grid.lan
[2025-06-03 11:08:30] apptainer works
[2025-06-03 11:08:30] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:08:30] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:08:30] Starting ATLAS job with PandaID=6677402812
[2025-06-03 11:08:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:06:04]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:06:04] 2025-06-03 12:47:54,234 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:06:04] 2025-06-03 12:47:54,234 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:06:04] 2025-06-03 12:47:54,234 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:06:04] 2025-06-03 12:47:54,235 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:06:04] 2025-06-03 12:47:54,239 | INFO     | fitting pss+swap vs Time
[2025-06-03 15:06:04] 2025-06-03 12:47:54,240 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 15:06:04] 2025-06-03 12:47:54,241 | INFO     | sum of deviations: -11316722500.999998
[2025-06-03 15:06:04] 2025-06-03 12:47:54,242 | INFO     | mean x: 1748948270.0
[2025-06-03 15:06:04] 2025-06-03 12:47:54,242 | INFO     | mean y: 2490150.117370892
[2025-06-03 15:06:04] 2025-06-03 12:47:54,242 | INFO     | -- intersect: 6607750939.470402
[2025-06-03 15:06:04] 2025-06-03 12:47:54,242 | INFO     | intersect: 6607750939.470402
[2025-06-03 15:06:04] 2025-06-03 12:47:54,244 | INFO     | chi2: 2.5985129976361474
[2025-06-03 15:06:04] 2025-06-03 12:47:54,245 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 15:06:04] 2025-06-03 12:47:54,247 | INFO     | sum of deviations: 2971536950.500007
[2025-06-03 15:06:04] 2025-06-03 12:47:54,247 | INFO     | mean x: 1748948117.5
[2025-06-03 15:06:04] 2025-06-03 12:47:54,247 | INFO     | mean y: 2500524.0528846155
[2025-06-03 15:06:04] 2025-06-03 12:47:54,247 | INFO     | -- intersect: -1860014011.6992009
[2025-06-03 15:06:04] 2025-06-03 12:47:54,247 | INFO     | intersect: -1860014011.6992009
[2025-06-03 15:06:04] 2025-06-03 12:47:54,248 | INFO     | chi2: 1.8313210127832502
[2025-06-03 15:06:04] 2025-06-03 12:47:54,248 | INFO     | current chi2=1.8313210127832502 (change=29.524269670800468 %)
[2025-06-03 15:06:04] 2025-06-03 12:47:54,248 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 15:06:04] 2025-06-03 12:47:54,250 | INFO     | sum of deviations: 2932808508.0000067
[2025-06-03 15:06:04] 2025-06-03 12:47:54,250 | INFO     | mean x: 1748947965.0
[2025-06-03 15:06:04] 2025-06-03 12:47:54,250 | INFO     | mean y: 2500493.9802955664
[2025-06-03 15:06:04] 2025-06-03 12:47:54,250 | INFO     | -- intersect: -1974945344.6766438
[2025-06-03 15:06:04] 2025-06-03 12:47:54,251 | INFO     | intersect: -1974945344.6766438
[2025-06-03 15:06:04] 2025-06-03 12:47:54,251 | INFO     | chi2: 1.8316707375278471
[2025-06-03 15:06:04] 2025-06-03 12:47:54,251 | INFO     | current chi2=1.8316707375278471 (change=-0.01909685643072604 %)
[2025-06-03 15:06:04] 2025-06-03 12:47:54,251 | INFO     | right removable region: 202
[2025-06-03 15:06:04] 2025-06-03 12:47:54,252 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 15:06:04] 2025-06-03 12:47:54,253 | INFO     | sum of deviations: -47267702569.99999
[2025-06-03 15:06:04] 2025-06-03 12:47:54,253 | INFO     | mean x: 1748948422.5
[2025-06-03 15:06:04] 2025-06-03 12:47:54,253 | INFO     | mean y: 2516504.2115384615
[2025-06-03 15:06:04] 2025-06-03 12:47:54,254 | INFO     | -- intersect: 29629204621.34885
[2025-06-03 15:06:04] 2025-06-03 12:47:54,254 | INFO     | intersect: 29629204621.34885
[2025-06-03 15:06:04] 2025-06-03 12:47:54,254 | INFO     | chi2: 0.9900460377625163
[2025-06-03 15:06:04] 2025-06-03 12:47:54,254 | INFO     | current chi2=0.9900460377625163 (change=61.899515659026704 %)
[2025-06-03 15:06:04] 2025-06-03 12:47:54,255 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 15:06:04] 2025-06-03 12:47:54,272 | INFO     | sum of deviations: -45085028934.99999
[2025-06-03 15:06:04] 2025-06-03 12:47:54,273 | INFO     | mean x: 1748948575.0
[2025-06-03 15:06:04] 2025-06-03 12:47:54,273 | INFO     | mean y: 2514766.9655172415
[2025-06-03 15:06:04] 2025-06-03 12:47:54,273 | INFO     | -- intersect: 30401101549.909904
[2025-06-03 15:06:04] 2025-06-03 12:47:54,273 | INFO     | intersect: 30401101549.909904
[2025-06-03 15:06:04] 2025-06-03 12:47:54,274 | INFO     | chi2: 0.975313403788323
[2025-06-03 15:06:04] 2025-06-03 12:47:54,274 | INFO     | current chi2=0.975313403788323 (change=1.4880756462082088 %)
[2025-06-03 15:06:04] 2025-06-03 12:47:54,274 | INFO     | left removable region: 20
[2025-06-03 15:06:04] 2025-06-03 12:47:54,274 | INFO     | sum of square deviations: 1869302025.5
[2025-06-03 15:06:04] 2025-06-03 12:47:54,276 | INFO     | sum of deviations: -16938855150.000002
[2025-06-03 15:06:04] 2025-06-03 12:47:54,276 | INFO     | mean x: 1748948544.5
[2025-06-03 15:06:04] 2025-06-03 12:47:54,276 | INFO     | mean y: 2514965.098901099
[2025-06-03 15:06:04] 2025-06-03 12:47:54,276 | INFO     | -- intersect: 15850775789.705189
[2025-06-03 15:06:04] 2025-06-03 12:47:54,276 | INFO     | intersect: 15850775789.705189
[2025-06-03 15:06:04] 2025-06-03 12:47:54,276 | INFO     | chi2: 0.1417142663123933
[2025-06-03 15:06:04] 2025-06-03 12:47:54,277 | INFO     | -- intersect: 15850775789.705189
[2025-06-03 15:06:04] 2025-06-03 12:47:54,277 | INFO     | current memory leak: -9.06 B/s (using 182 data points, chi2=0.14)
[2025-06-03 15:06:04] 2025-06-03 12:47:54,278 | INFO     | ..............................
[2025-06-03 15:06:04] 2025-06-03 12:47:54,278 | INFO     | . Timing measurements:
[2025-06-03 15:06:04] 2025-06-03 12:47:54,278 | INFO     | . get job = 0 s
[2025-06-03 15:06:04] 2025-06-03 12:47:54,278 | INFO     | . initial setup = 2 s
[2025-06-03 15:06:04] 2025-06-03 12:47:54,278 | INFO     | . payload setup = 14 s
[2025-06-03 15:06:04] 2025-06-03 12:47:54,278 | INFO     | . stage-in = 0 s
[2025-06-03 15:06:04] 2025-06-03 12:47:54,278 | INFO     | . payload execution = 13002 s
[2025-06-03 15:06:04] 2025-06-03 12:47:54,278 | INFO     | . stage-out = 3 s
[2025-06-03 15:06:04] 2025-06-03 12:47:54,279 | INFO     | . log creation = 1 s
[2025-06-03 15:06:04] 2025-06-03 12:47:54,279 | INFO     | ..............................
[2025-06-03 15:06:04] 2025-06-03 12:47:54,461 | INFO     | 
[2025-06-03 15:06:04] 2025-06-03 12:47:54,462 | INFO     | job summary report
[2025-06-03 15:06:04] 2025-06-03 12:47:54,462 | INFO     | --------------------------------------------------
[2025-06-03 15:06:04] 2025-06-03 12:47:54,462 | INFO     | PanDA job id: 6677402812
[2025-06-03 15:06:04] 2025-06-03 12:47:54,462 | INFO     | task id: 45006595
[2025-06-03 15:06:04] 2025-06-03 12:47:54,462 | INFO     | errors: (none)
[2025-06-03 15:06:04] 2025-06-03 12:47:54,462 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:06:04] 2025-06-03 12:47:54,462 | INFO     | pilot state: finished 
[2025-06-03 15:06:04] 2025-06-03 12:47:54,462 | INFO     | transexitcode: 0
[2025-06-03 15:06:04] 2025-06-03 12:47:54,462 | INFO     | exeerrorcode: 0
[2025-06-03 15:06:04] 2025-06-03 12:47:54,462 | INFO     | exeerrordiag: 
[2025-06-03 15:06:04] 2025-06-03 12:47:54,462 | INFO     | exitcode: 0
[2025-06-03 15:06:04] 2025-06-03 12:47:54,463 | INFO     | exitmsg: OK
[2025-06-03 15:06:04] 2025-06-03 12:47:54,463 | INFO     | cpuconsumptiontime: 49851 s
[2025-06-03 15:06:04] 2025-06-03 12:47:54,463 | INFO     | nevents: 400
[2025-06-03 15:06:04] 2025-06-03 12:47:54,463 | INFO     | neventsw: 0
[2025-06-03 15:06:04] 2025-06-03 12:47:54,463 | INFO     | pid: 7295
[2025-06-03 15:06:04] 2025-06-03 12:47:54,463 | INFO     | pgrp: 7295
[2025-06-03 15:06:04] 2025-06-03 12:47:54,463 | INFO     | corecount: 8
[2025-06-03 15:06:04] 2025-06-03 12:47:54,463 | INFO     | event service: False
[2025-06-03 15:06:04] 2025-06-03 12:47:54,463 | INFO     | sizes: {0: 2404955, 1: 2405210, 12: 2405210, 16: 2405444, 23: 2405472, 13021: 2434865, 13025: 2443862, 13111: 2443976}
[2025-06-03 15:06:04] 2025-06-03 12:47:54,463 | INFO     | --------------------------------------------------
[2025-06-03 15:06:04] 2025-06-03 12:47:54,463 | INFO     | 
[2025-06-03 15:06:04] 2025-06-03 12:47:54,463 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-03 15:06:04] 2025-06-03 12:47:54,847 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,847 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,847 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,847 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,848 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,848 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,848 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,848 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,848 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,848 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,848 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,848 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,848 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,849 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,849 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,849 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,849 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,849 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:06:04] 2025-06-03 12:47:54,849 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,849 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:06:04] 2025-06-03 12:47:54,849 | INFO     | job 6677402812 has completed (purged errors)
[2025-06-03 15:06:04] 2025-06-03 12:47:54,849 | INFO     | overall cleanup function is called
[2025-06-03 15:06:04] 2025-06-03 12:47:55,857 | INFO     | --- collectZombieJob: --- 10, [7295]
[2025-06-03 15:06:04] 2025-06-03 12:47:55,858 | INFO     | zombie collector waiting for pid 7295
[2025-06-03 15:06:04] 2025-06-03 12:47:55,858 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:06:04] 2025-06-03 12:47:55,858 | INFO     | collected zombie processes
[2025-06-03 15:06:04] 2025-06-03 12:47:55,858 | INFO     | will attempt to kill all subprocesses of pid=7295
[2025-06-03 15:06:04] 2025-06-03 12:47:55,967 | INFO     | process IDs to be killed: [7295] (in reverse order)
[2025-06-03 15:06:04] 2025-06-03 12:47:56,889 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:06:04] 2025-06-03 12:47:56,890 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:06:04] 2025-06-03 12:47:56,893 | INFO     | did not find any defunct processes belonging to 7295
[2025-06-03 15:06:04] 2025-06-03 12:47:56,897 | INFO     | did not find any defunct processes belonging to 7295
[2025-06-03 15:06:04] 2025-06-03 12:47:56,897 | INFO     | ready for new job
[2025-06-03 15:06:04] 2025-06-03 12:47:56,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:06:04] 2025-06-03 12:47:56,899 | INFO     | **************************************
[2025-06-03 15:06:04] 2025-06-03 12:47:56,900 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 15:06:04] 2025-06-03 12:47:56,900 | INFO     | **************************************
[2025-06-03 15:06:04] 2025-06-03 12:47:56,900 | INFO     | 
[2025-06-03 15:06:04] 2025-06-03 12:47:56,901 | INFO     | pilot is running in a VM
[2025-06-03 15:06:04] 2025-06-03 12:47:56,901 | INFO     | architecture information:
[2025-06-03 15:06:04] 2025-06-03 12:47:56,906 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:06:04] 2025-06-03 12:47:57,154 | INFO     | cat /etc/os-release:
[2025-06-03 15:06:04] NAME="CentOS Linux"
[2025-06-03 15:06:04] VERSION="7 (Core)"
[2025-06-03 15:06:04] ID="centos"
[2025-06-03 15:06:04] ID_LIKE="rhel fedora"
[2025-06-03 15:06:04] VERSION_ID="7"
[2025-06-03 15:06:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:06:04] ANSI_COLOR="0;31"
[2025-06-03 15:06:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:06:04] HOME_URL="https://www.centos.org/"
[2025-06-03 15:06:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:06:04] 
[2025-06-03 15:06:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:06:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:06:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:06:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:06:04] 
[2025-06-03 15:06:04] 2025-06-03 12:47:57,155 | INFO     | **************************************
[2025-06-03 15:06:04] 2025-06-03 12:47:57,658 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-03 15:06:04] 2025-06-03 12:47:57,911 | INFO     | sufficient remaining disk space (496903389184 B)
[2025-06-03 15:06:04] 2025-06-03 12:47:57,911 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:06:04] 2025-06-03 12:47:57,912 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:06:04] 2025-06-03 12:47:57,912 | INFO     | update_server=False
[2025-06-03 15:06:04] 2025-06-03 12:47:57,912 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:06:04] 2025-06-03 12:47:57,913 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:06:04] 2025-06-03 12:47:57,914 | INFO     | aborting loop
[2025-06-03 15:06:04] 2025-06-03 12:47:57,915 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 15:06:04] 2025-06-03 12:47:57,916 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:06:04] 2025-06-03 12:47:57,916 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:06:04] 2025-06-03 12:47:57,916 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:06:04] 2025-06-03 12:47:58,214 | INFO     | all data control threads have been joined
[2025-06-03 15:06:04] 2025-06-03 12:47:58,324 | INFO     | all payload control threads have been joined
[2025-06-03 15:06:04] 2025-06-03 12:47:58,608 | INFO     | all job control threads have been joined
[2025-06-03 15:06:04] 2025-06-03 12:47:58,917 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:06:04] 2025-06-03 12:47:58,920 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:06:04] 2025-06-03 12:47:58,958 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:06:04] 2025-06-03 12:47:59,219 | INFO     | [data] control thread has finished
[2025-06-03 15:06:04] 2025-06-03 12:47:59,330 | INFO     | [payload] control thread has finished
[2025-06-03 15:06:04] 2025-06-03 12:47:59,373 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:06:04] 2025-06-03 12:47:59,479 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:06:04] 2025-06-03 12:47:59,566 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:06:04] 2025-06-03 12:47:59,614 | INFO     | [job] control thread has finished
[2025-06-03 15:06:04] 2025-06-03 12:47:59,748 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:06:04] 2025-06-03 12:47:59,786 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:06:04] 2025-06-03 12:48:00,057 | INFO     | [job] validate thread has finished
[2025-06-03 15:06:04] 2025-06-03 12:48:00,168 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:06:04] 2025-06-03 12:48:00,182 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:06:04] 2025-06-03 12:48:00,417 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:06:04] 2025-06-03 12:48:00,485 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:06:04] 2025-06-03 12:48:00,965 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:06:04] 2025-06-03 12:48:04,177 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:06:04] 2025-06-03 12:48:08,186 | INFO     | job.realtimelogging is not enabled
[2025-06-03 15:06:04] 2025-06-03 12:48:09,192 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:06:04] 2025-06-03 12:48:11,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139784194111296)>', '<ExcThread(monitor, started 139783904933632)>']
[2025-06-03 15:06:04] 2025-06-03 12:48:12,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:06:04] 2025-06-03 12:48:12,001 | INFO     | [monitor] control thread has ended
[2025-06-03 15:06:04] 2025-06-03 12:48:16,028 | INFO     | all workflow threads have been joined
[2025-06-03 15:06:04] 2025-06-03 12:48:16,029 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:06:04] 2025-06-03 12:48:16,029 | INFO     | traces error code: 0
[2025-06-03 15:06:04] 2025-06-03 12:48:16,029 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:06:04] 2025-06-03 12:48:16,460 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:06:04] 2025-06-03 12:48:16,562 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:06:04] 2025-06-03 12:48:16,622 [wrapper] pilotpid: 28208
[2025-06-03 15:06:04] 2025-06-03 12:48:16,681 [wrapper] Pilot exit status: 0
[2025-06-03 15:06:04] 2025-06-03 12:48:17,094 [wrapper] pandaids: 6677402812
[2025-06-03 15:06:04] 2025-06-03 12:48:17,160 [wrapper] cleanup supervisor_pilot 27487 28209
[2025-06-03 15:06:04] 2025-06-03 12:48:17,211 [wrapper] Test setup, not cleaning
[2025-06-03 15:06:04] 2025-06-03 12:48:17,301 [wrapper] apfmon messages muted
[2025-06-03 15:06:04] 2025-06-03 12:48:17,364 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:06:04] 2025-06-03 12:48:17,476 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:06:04]  *** Error codes and diagnostics ***
[2025-06-03 15:06:04]     "exeErrorCode": 0,
[2025-06-03 15:06:04]     "exeErrorDiag": "",
[2025-06-03 15:06:04]     "pilotErrorCode": 0,
[2025-06-03 15:06:04]     "pilotErrorDiag": "",
[2025-06-03 15:06:04]  *** Listing of results directory ***
[2025-06-03 15:06:04] total 396568
[2025-06-03 15:06:04] -rw-r--r--. 1 boinc boinc    495897 Jun  3 00:15 pilot3.tar.gz
[2025-06-03 15:06:04] -rwx------. 1 boinc boinc     37140 Jun  3 00:19 runpilot2-wrapper.sh
[2025-06-03 15:06:04] -rw-r--r--. 1 boinc boinc      5111 Jun  3 00:19 queuedata.json
[2025-06-03 15:06:04] -rw-r--r--. 1 boinc boinc       100 Jun  3 11:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:06:04] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 11:08 run_atlas
[2025-06-03 15:06:04] -rw-r--r--. 1 boinc boinc       105 Jun  3 11:08 job.xml
[2025-06-03 15:06:04] -rw-r--r--. 2 boinc boinc 215859359 Jun  3 11:08 EVNT.45006593._000522.pool.root.1
[2025-06-03 15:06:04] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:08 start_atlas.sh
[2025-06-03 15:06:04] drwxrwx--x. 2 boinc boinc        68 Jun  3 11:08 shared
[2025-06-03 15:06:04] -rw-r--r--. 2 boinc boinc    508871 Jun  3 11:08 input.tar.gz
[2025-06-03 15:06:04] -rw-r--r--. 1 boinc boinc      6392 Jun  3 11:08 init_data.xml
[2025-06-03 15:06:04] -rw-r--r--. 1 boinc boinc         0 Jun  3 11:08 boinc_lockfile
[2025-06-03 15:06:04] -rw-r--r--. 1 boinc boinc      2524 Jun  3 11:08 pandaJob.out
[2025-06-03 15:06:04] -rw-------. 1 boinc boinc    985498 Jun  3 11:08 agis_schedconf.cvmfs.json
[2025-06-03 15:06:04] drwx------. 4 boinc boinc      4096 Jun  3 11:08 pilot3
[2025-06-03 15:06:04] -rw-------. 1 boinc boinc 183391602 Jun  3 14:44 HITS.45006595._013036.pool.root.1
[2025-06-03 15:06:04] -rw-r--r--. 1 boinc boinc       531 Jun  3 14:45 boinc_task_state.xml
[2025-06-03 15:06:04] -rw-------. 1 boinc boinc      1017 Jun  3 14:46 memory_monitor_summary.json
[2025-06-03 15:06:04] -rw-------. 1 boinc boinc   1603667 Jun  3 14:46 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:06:04] -rw-------. 1 boinc boinc    371590 Jun  3 14:46 log.45006595._013036.job.log.tgz.1
[2025-06-03 15:06:04] -rw-------. 1 boinc boinc        95 Jun  3 14:47 pilot_heartbeat.json
[2025-06-03 15:06:04] -rw-------. 1 boinc boinc      7685 Jun  3 14:47 heartbeat.json
[2025-06-03 15:06:04] -rw-------. 1 boinc boinc      4611 Jun  3 14:48 pilotlog.txt
[2025-06-03 15:06:04] -rw-------. 1 boinc boinc   1136762 Jun  3 14:48 log.45006595._013036.job.log.1
[2025-06-03 15:06:04] -rw-------. 1 boinc boinc       357 Jun  3 14:48 output.list
[2025-06-03 15:06:04] -rw-r--r--. 1 boinc boinc       620 Jun  3 14:48 runtime_log
[2025-06-03 15:06:04] -rw-------. 1 boinc boinc   1525760 Jun  3 14:48 result.tar.gz
[2025-06-03 15:06:04] -rw-r--r--. 1 boinc boinc      8659 Jun  3 14:48 runtime_log.err
[2025-06-03 15:06:04] -rw-------. 1 boinc boinc       656 Jun  3 14:48 K1eKDmGgSg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbkWKDmWjBy7n.diag
[2025-06-03 15:06:04] -rw-r--r--. 1 boinc boinc      8192 Jun  3 15:06 boinc_mmap_file
[2025-06-03 15:06:04] -rw-r--r--. 1 boinc boinc        28 Jun  3 15:06 wrapper_checkpoint.txt
[2025-06-03 15:06:04] -rw-r--r--. 1 boinc boinc     20473 Jun  3 15:06 stderr.txt
[2025-06-03 15:06:04] HITS file was successfully produced:
[2025-06-03 15:06:04] -rw-------. 1 boinc boinc 183391602 Jun  3 14:44 shared/HITS.pool.root.1
[2025-06-03 15:06:04]  *** Contents of shared directory: ***
[2025-06-03 15:06:04] total 391908
[2025-06-03 15:06:04] -rw-r--r--. 2 boinc boinc 215859359 Jun  3 11:08 ATLAS.root_0
[2025-06-03 15:06:04] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:08 start_atlas.sh
[2025-06-03 15:06:04] -rw-r--r--. 2 boinc boinc    508871 Jun  3 11:08 input.tar.gz
[2025-06-03 15:06:04] -rw-------. 1 boinc boinc 183391602 Jun  3 14:44 HITS.pool.root.1
[2025-06-03 15:06:04] -rw-------. 1 boinc boinc   1525760 Jun  3 14:48 result.tar.gz
15:06:06 (24209): run_atlas exited; CPU time 50013.113605
15:06:06 (24209): called boinc_finish(0)

</stderr_txt>
]]>

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