Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:48:22 (6999): wrapper (7.7.26015): starting
11:48:22 (6999): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:48:22] Arguments: --nthreads 8
[2025-06-03 11:48:22] Threads: 8
[2025-06-03 11:48:22] Checking for CVMFS
[2025-06-03 11:48:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:48:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:48:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:48:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:48:25] 2.11.2.0 16161 31596 92172 146737 3 108 12723158 25165824 4307 130560 0 16452965 99.826 16867567 2095 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 11:48:25] CVMFS is ok
[2025-06-03 11:48:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:48:25] Checking for apptainer binary...
[2025-06-03 11:48:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:48:25] Running /usr/bin/apptainer --version
[2025-06-03 11:48:25] apptainer version 1.3.2-1.el7
[2025-06-03 11:48:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:48:27] cg-vwn420.simple-grid.lan
[2025-06-03 11:48:27] apptainer works
[2025-06-03 11:48:27] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:48:27] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:48:27] Starting ATLAS job with PandaID=6677402237
[2025-06-03 11:48:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:44:54]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:44:54] 2025-06-03 13:44:36,740 | INFO     | extracted standard info from prmon json
[2025-06-03 15:44:54] 2025-06-03 13:44:36,740 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:44:54] 2025-06-03 13:44:36,740 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:44:54] 2025-06-03 13:44:36,741 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:44:54] 2025-06-03 13:44:36,741 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:44:54] 2025-06-03 13:44:36,746 | INFO     | fitting pss+swap vs Time
[2025-06-03 15:44:54] 2025-06-03 13:44:36,747 | INFO     | sum of square deviations: 3579276412.5
[2025-06-03 15:44:54] 2025-06-03 13:44:36,749 | INFO     | sum of deviations: -40496631657.49999
[2025-06-03 15:44:54] 2025-06-03 13:44:36,757 | INFO     | mean x: 1748951320.5
[2025-06-03 15:44:54] 2025-06-03 13:44:36,757 | INFO     | mean y: 2561313.632743363
[2025-06-03 15:44:54] 2025-06-03 13:44:36,757 | INFO     | -- intersect: 19790537778.88617
[2025-06-03 15:44:54] 2025-06-03 13:44:36,757 | INFO     | intersect: 19790537778.88617
[2025-06-03 15:44:54] 2025-06-03 13:44:36,758 | INFO     | chi2: 2.3086609921829937
[2025-06-03 15:44:54] 2025-06-03 13:44:36,758 | INFO     | sum of square deviations: 3346927870.0
[2025-06-03 15:44:54] 2025-06-03 13:44:36,760 | INFO     | sum of deviations: -38227779632.00001
[2025-06-03 15:44:54] 2025-06-03 13:44:36,760 | INFO     | mean x: 1748951168.0
[2025-06-03 15:44:54] 2025-06-03 13:44:36,760 | INFO     | mean y: 2562803.104072398
[2025-06-03 15:44:54] 2025-06-03 13:44:36,760 | INFO     | -- intersect: 19978649063.198177
[2025-06-03 15:44:54] 2025-06-03 13:44:36,761 | INFO     | intersect: 19978649063.198177
[2025-06-03 15:44:54] 2025-06-03 13:44:36,761 | INFO     | chi2: 2.307801005385118
[2025-06-03 15:44:54] 2025-06-03 13:44:36,761 | INFO     | current chi2=2.307801005385118 (change=0.037250458200118984 %)
[2025-06-03 15:44:54] 2025-06-03 13:44:36,761 | INFO     | right removable region: 220
[2025-06-03 15:44:54] 2025-06-03 13:44:36,762 | INFO     | sum of square deviations: 3346927870.0
[2025-06-03 15:44:54] 2025-06-03 13:44:36,763 | INFO     | sum of deviations: -86394714311.99997
[2025-06-03 15:44:54] 2025-06-03 13:44:36,764 | INFO     | mean x: 1748951473.0
[2025-06-03 15:44:54] 2025-06-03 13:44:36,764 | INFO     | mean y: 2591220.8325791857
[2025-06-03 15:44:54] 2025-06-03 13:44:36,764 | INFO     | -- intersect: 45148518687.55942
[2025-06-03 15:44:54] 2025-06-03 13:44:36,764 | INFO     | intersect: 45148518687.55942
[2025-06-03 15:44:54] 2025-06-03 13:44:36,764 | INFO     | chi2: 0.29668889800855525
[2025-06-03 15:44:54] 2025-06-03 13:44:36,764 | INFO     | current chi2=0.29668889800855525 (change=87.14887551645182 %)
[2025-06-03 15:44:54] 2025-06-03 13:44:36,765 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 15:44:54] 2025-06-03 13:44:36,766 | INFO     | sum of deviations: -92241285145.49998
[2025-06-03 15:44:54] 2025-06-03 13:44:36,766 | INFO     | mean x: 1748951625.5
[2025-06-03 15:44:54] 2025-06-03 13:44:36,767 | INFO     | mean y: 2595235.7546296297
[2025-06-03 15:44:54] 2025-06-03 13:44:36,767 | INFO     | -- intersect: 51629105987.21593
[2025-06-03 15:44:54] 2025-06-03 13:44:36,767 | INFO     | intersect: 51629105987.21593
[2025-06-03 15:44:54] 2025-06-03 13:44:36,767 | INFO     | chi2: 0.21197549816761674
[2025-06-03 15:44:54] 2025-06-03 13:44:36,767 | INFO     | current chi2=0.21197549816761674 (change=28.552938923415912 %)
[2025-06-03 15:44:54] 2025-06-03 13:44:36,768 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 15:44:54] 2025-06-03 13:44:36,769 | INFO     | sum of deviations: -88446171091.0
[2025-06-03 15:44:54] 2025-06-03 13:44:36,769 | INFO     | mean x: 1748951778.0
[2025-06-03 15:44:54] 2025-06-03 13:44:36,770 | INFO     | mean y: 2592501.184834123
[2025-06-03 15:44:54] 2025-06-03 13:44:36,770 | INFO     | -- intersect: 53108255729.68106
[2025-06-03 15:44:54] 2025-06-03 13:44:36,770 | INFO     | intersect: 53108255729.68106
[2025-06-03 15:44:54] 2025-06-03 13:44:36,770 | INFO     | chi2: 0.20813469960119926
[2025-06-03 15:44:54] 2025-06-03 13:44:36,770 | INFO     | current chi2=0.20813469960119926 (change=1.811906847545378 %)
[2025-06-03 15:44:54] 2025-06-03 13:44:36,770 | INFO     | left removable region: 30
[2025-06-03 15:44:54] 2025-06-03 13:44:36,771 | INFO     | sum of square deviations: 2126802667.5
[2025-06-03 15:44:54] 2025-06-03 13:44:36,772 | INFO     | sum of deviations: -69232846730.5
[2025-06-03 15:44:54] 2025-06-03 13:44:36,772 | INFO     | mean x: 1748952052.5
[2025-06-03 15:44:54] 2025-06-03 13:44:36,773 | INFO     | mean y: 2582281.794736842
[2025-06-03 15:44:54] 2025-06-03 13:44:36,773 | INFO     | -- intersect: 56935428586.74037
[2025-06-03 15:44:54] 2025-06-03 13:44:36,773 | INFO     | intersect: 56935428586.74037
[2025-06-03 15:44:54] 2025-06-03 13:44:36,773 | INFO     | chi2: 0.1980016726002357
[2025-06-03 15:44:54] 2025-06-03 13:44:36,773 | INFO     | -- intersect: 56935428586.74037
[2025-06-03 15:44:54] 2025-06-03 13:44:36,773 | INFO     | current memory leak: -32.55 B/s (using 190 data points, chi2=0.20)
[2025-06-03 15:44:54] 2025-06-03 13:44:36,774 | INFO     | ..............................
[2025-06-03 15:44:54] 2025-06-03 13:44:36,774 | INFO     | . Timing measurements:
[2025-06-03 15:44:54] 2025-06-03 13:44:36,775 | INFO     | . get job = 0 s
[2025-06-03 15:44:54] 2025-06-03 13:44:36,775 | INFO     | . initial setup = 3 s
[2025-06-03 15:44:54] 2025-06-03 13:44:36,775 | INFO     | . payload setup = 64 s
[2025-06-03 15:44:54] 2025-06-03 13:44:36,775 | INFO     | . stage-in = 0 s
[2025-06-03 15:44:54] 2025-06-03 13:44:36,775 | INFO     | . payload execution = 13855 s
[2025-06-03 15:44:54] 2025-06-03 13:44:36,775 | INFO     | . stage-out = 2 s
[2025-06-03 15:44:54] 2025-06-03 13:44:36,775 | INFO     | . log creation = 0 s
[2025-06-03 15:44:54] 2025-06-03 13:44:36,775 | INFO     | ..............................
[2025-06-03 15:44:54] 2025-06-03 13:44:36,965 | INFO     | 
[2025-06-03 15:44:54] 2025-06-03 13:44:36,965 | INFO     | job summary report
[2025-06-03 15:44:54] 2025-06-03 13:44:36,965 | INFO     | --------------------------------------------------
[2025-06-03 15:44:54] 2025-06-03 13:44:36,965 | INFO     | PanDA job id: 6677402237
[2025-06-03 15:44:54] 2025-06-03 13:44:36,965 | INFO     | task id: 45006595
[2025-06-03 15:44:54] 2025-06-03 13:44:36,965 | INFO     | errors: (none)
[2025-06-03 15:44:54] 2025-06-03 13:44:36,965 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:44:54] 2025-06-03 13:44:36,966 | INFO     | pilot state: finished 
[2025-06-03 15:44:54] 2025-06-03 13:44:36,966 | INFO     | transexitcode: 0
[2025-06-03 15:44:54] 2025-06-03 13:44:36,966 | INFO     | exeerrorcode: 0
[2025-06-03 15:44:54] 2025-06-03 13:44:36,966 | INFO     | exeerrordiag: 
[2025-06-03 15:44:54] 2025-06-03 13:44:36,966 | INFO     | exitcode: 0
[2025-06-03 15:44:54] 2025-06-03 13:44:36,966 | INFO     | exitmsg: OK
[2025-06-03 15:44:54] 2025-06-03 13:44:36,966 | INFO     | cpuconsumptiontime: 48798 s
[2025-06-03 15:44:54] 2025-06-03 13:44:36,966 | INFO     | nevents: 400
[2025-06-03 15:44:54] 2025-06-03 13:44:36,966 | INFO     | neventsw: 0
[2025-06-03 15:44:54] 2025-06-03 13:44:36,966 | INFO     | pid: 18476
[2025-06-03 15:44:54] 2025-06-03 13:44:36,966 | INFO     | pgrp: 18476
[2025-06-03 15:44:54] 2025-06-03 13:44:36,967 | INFO     | corecount: 8
[2025-06-03 15:44:54] 2025-06-03 13:44:36,967 | INFO     | event service: False
[2025-06-03 15:44:54] 2025-06-03 13:44:36,967 | INFO     | sizes: {0: 2405011, 1: 2405210, 12: 2405210, 23: 2405238, 33: 2405266, 44: 2405322, 47: 2405684, 55: 2405740, 13923: 2435414, 13926: 2444355, 13928: 2444411, 13970
[2025-06-03 15:44:54] 2025-06-03 13:44:36,967 | INFO     | --------------------------------------------------
[2025-06-03 15:44:54] 2025-06-03 13:44:36,967 | INFO     | 
[2025-06-03 15:44:54] 2025-06-03 13:44:36,967 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-03 15:44:54] 2025-06-03 13:44:37,016 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,017 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,017 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,017 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,017 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,017 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,017 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,017 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,017 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,017 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,018 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,018 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,018 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,018 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,018 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,018 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,018 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,018 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:44:54] 2025-06-03 13:44:37,018 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,018 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:44:54] 2025-06-03 13:44:37,019 | INFO     | job 6677402237 has completed (purged errors)
[2025-06-03 15:44:54] 2025-06-03 13:44:37,019 | INFO     | overall cleanup function is called
[2025-06-03 15:44:54] 2025-06-03 13:44:38,027 | INFO     | --- collectZombieJob: --- 10, [18476]
[2025-06-03 15:44:54] 2025-06-03 13:44:38,027 | INFO     | zombie collector waiting for pid 18476
[2025-06-03 15:44:54] 2025-06-03 13:44:38,027 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:44:54] 2025-06-03 13:44:38,027 | INFO     | collected zombie processes
[2025-06-03 15:44:54] 2025-06-03 13:44:38,027 | INFO     | will attempt to kill all subprocesses of pid=18476
[2025-06-03 15:44:54] 2025-06-03 13:44:38,121 | INFO     | process IDs to be killed: [18476] (in reverse order)
[2025-06-03 15:44:54] 2025-06-03 13:44:38,187 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:44:54] 2025-06-03 13:44:38,188 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:44:54] 2025-06-03 13:44:38,191 | INFO     | did not find any defunct processes belonging to 18476
[2025-06-03 15:44:54] 2025-06-03 13:44:38,195 | INFO     | did not find any defunct processes belonging to 18476
[2025-06-03 15:44:54] 2025-06-03 13:44:38,195 | INFO     | ready for new job
[2025-06-03 15:44:54] 2025-06-03 13:44:38,195 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:44:54] 2025-06-03 13:44:38,197 | INFO     | **************************************
[2025-06-03 15:44:54] 2025-06-03 13:44:38,198 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 15:44:54] 2025-06-03 13:44:38,198 | INFO     | **************************************
[2025-06-03 15:44:54] 2025-06-03 13:44:38,198 | INFO     | 
[2025-06-03 15:44:54] 2025-06-03 13:44:38,198 | INFO     | pilot is running in a VM
[2025-06-03 15:44:54] 2025-06-03 13:44:38,198 | INFO     | architecture information:
[2025-06-03 15:44:54] 2025-06-03 13:44:38,199 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:44:54] 2025-06-03 13:44:38,306 | INFO     | cat /etc/os-release:
[2025-06-03 15:44:54] NAME="CentOS Linux"
[2025-06-03 15:44:54] VERSION="7 (Core)"
[2025-06-03 15:44:54] ID="centos"
[2025-06-03 15:44:54] ID_LIKE="rhel fedora"
[2025-06-03 15:44:54] VERSION_ID="7"
[2025-06-03 15:44:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:44:54] ANSI_COLOR="0;31"
[2025-06-03 15:44:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:44:54] HOME_URL="https://www.centos.org/"
[2025-06-03 15:44:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:44:54] 
[2025-06-03 15:44:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:44:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:44:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:44:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:44:54] 
[2025-06-03 15:44:54] 2025-06-03 13:44:38,306 | INFO     | **************************************
[2025-06-03 15:44:54] 2025-06-03 13:44:38,810 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-03 15:44:54] 2025-06-03 13:44:38,926 | INFO     | sufficient remaining disk space (495558066176 B)
[2025-06-03 15:44:54] 2025-06-03 13:44:38,927 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:44:54] 2025-06-03 13:44:38,927 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:44:54] 2025-06-03 13:44:38,927 | INFO     | update_server=False
[2025-06-03 15:44:54] 2025-06-03 13:44:38,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:44:54] 2025-06-03 13:44:38,927 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:44:54] 2025-06-03 13:44:38,928 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 15:44:54] 2025-06-03 13:44:38,928 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:44:54] 2025-06-03 13:44:38,928 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:44:54] 2025-06-03 13:44:38,928 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:44:54] 2025-06-03 13:44:39,039 | INFO     | all job control threads have been joined
[2025-06-03 15:44:54] 2025-06-03 13:44:39,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:44:54] 2025-06-03 13:44:39,451 | INFO     | aborting loop
[2025-06-03 15:44:54] 2025-06-03 13:44:39,681 | INFO     | all payload control threads have been joined
[2025-06-03 15:44:54] 2025-06-03 13:44:39,693 | INFO     | all data control threads have been joined
[2025-06-03 15:44:54] 2025-06-03 13:44:39,933 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:44:54] 2025-06-03 13:44:40,044 | INFO     | [job] control thread has finished
[2025-06-03 15:44:54] 2025-06-03 13:44:40,118 | INFO     | [job] validate thread has finished
[2025-06-03 15:44:54] 2025-06-03 13:44:40,266 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:44:54] 2025-06-03 13:44:40,268 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:44:54] 2025-06-03 13:44:40,457 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:44:54] 2025-06-03 13:44:40,687 | INFO     | [payload] control thread has finished
[2025-06-03 15:44:54] 2025-06-03 13:44:40,699 | INFO     | [data] control thread has finished
[2025-06-03 15:44:54] 2025-06-03 13:44:40,714 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:44:54] 2025-06-03 13:44:40,934 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:44:54] 2025-06-03 13:44:41,095 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:44:54] 2025-06-03 13:44:41,095 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:44:54] 2025-06-03 13:44:41,311 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:44:54] 2025-06-03 13:44:41,379 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:44:54] 2025-06-03 13:44:41,462 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:44:54] 2025-06-03 13:44:41,920 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:44:54] 2025-06-03 13:44:42,926 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:44:54] 2025-06-03 13:44:45,471 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:44:54] 2025-06-03 13:44:47,102 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139660038367040)>', '<ExcThread(monitor, started 139659745142528)>']
[2025-06-03 15:44:54] 2025-06-03 13:44:47,980 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:44:54] 2025-06-03 13:44:47,980 | INFO     | [monitor] control thread has ended
[2025-06-03 15:44:54] 2025-06-03 13:44:52,128 | INFO     | all workflow threads have been joined
[2025-06-03 15:44:54] 2025-06-03 13:44:52,128 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:44:54] 2025-06-03 13:44:52,128 | INFO     | traces error code: 0
[2025-06-03 15:44:54] 2025-06-03 13:44:52,129 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:44:54] 2025-06-03 13:44:52,379 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:44:54] 2025-06-03 13:44:52,430 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:44:54] 2025-06-03 13:44:52,463 [wrapper] pilotpid: 11034
[2025-06-03 15:44:54] 2025-06-03 13:44:52,484 [wrapper] Pilot exit status: 0
[2025-06-03 15:44:54] 2025-06-03 13:44:52,699 [wrapper] pandaids: 6677402237
[2025-06-03 15:44:54] 2025-06-03 13:44:52,741 [wrapper] cleanup supervisor_pilot  9645 11035
[2025-06-03 15:44:54] 2025-06-03 13:44:52,754 [wrapper] Test setup, not cleaning
[2025-06-03 15:44:54] 2025-06-03 13:44:52,767 [wrapper] apfmon messages muted
[2025-06-03 15:44:54] 2025-06-03 13:44:52,773 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:44:54] 2025-06-03 13:44:52,788 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:44:54]  *** Error codes and diagnostics ***
[2025-06-03 15:44:54]     "exeErrorCode": 0,
[2025-06-03 15:44:54]     "exeErrorDiag": "",
[2025-06-03 15:44:54]     "pilotErrorCode": 0,
[2025-06-03 15:44:54]     "pilotErrorDiag": "",
[2025-06-03 15:44:54]  *** Listing of results directory ***
[2025-06-03 15:44:54] total 386460
[2025-06-03 15:44:54] -rw-r--r--. 1 boinc boinc    495897 Jun  2 23:29 pilot3.tar.gz
[2025-06-03 15:44:54] -rw-r--r--. 1 boinc boinc      5111 Jun  2 23:40 queuedata.json
[2025-06-03 15:44:54] -rwx------. 1 boinc boinc     37140 Jun  2 23:41 runpilot2-wrapper.sh
[2025-06-03 15:44:54] -rw-r--r--. 1 boinc boinc       100 Jun  3 11:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:44:54] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 11:48 run_atlas
[2025-06-03 15:44:54] -rw-r--r--. 1 boinc boinc       105 Jun  3 11:48 job.xml
[2025-06-03 15:44:54] -rw-r--r--. 1 boinc boinc      6392 Jun  3 11:48 init_data.xml
[2025-06-03 15:44:54] -rw-r--r--. 2 boinc boinc 216237362 Jun  3 11:48 EVNT.45006593._000506.pool.root.1
[2025-06-03 15:44:54] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:48 start_atlas.sh
[2025-06-03 15:44:54] drwxrwx--x. 2 boinc boinc        68 Jun  3 11:48 shared
[2025-06-03 15:44:54] -rw-r--r--. 2 boinc boinc    508876 Jun  3 11:48 input.tar.gz
[2025-06-03 15:44:54] -rw-r--r--. 1 boinc boinc         0 Jun  3 11:48 boinc_lockfile
[2025-06-03 15:44:54] -rw-r--r--. 1 boinc boinc      2524 Jun  3 11:48 pandaJob.out
[2025-06-03 15:44:54] -rw-------. 1 boinc boinc    985490 Jun  3 11:49 agis_schedconf.cvmfs.json
[2025-06-03 15:44:54] drwx------. 4 boinc boinc      4096 Jun  3 11:49 pilot3
[2025-06-03 15:44:54] -rw-------. 1 boinc boinc 172477692 Jun  3 15:43 HITS.45006595._012642.pool.root.1
[2025-06-03 15:44:54] -rw-r--r--. 1 boinc boinc       530 Jun  3 15:43 boinc_task_state.xml
[2025-06-03 15:44:54] -rw-------. 1 boinc boinc      1012 Jun  3 15:43 memory_monitor_summary.json
[2025-06-03 15:44:54] -rw-------. 1 boinc boinc   1603667 Jun  3 15:43 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:44:54] -rw-------. 1 boinc boinc    386712 Jun  3 15:43 log.45006595._012642.job.log.tgz.1
[2025-06-03 15:44:54] -rw-------. 1 boinc boinc        95 Jun  3 15:44 pilot_heartbeat.json
[2025-06-03 15:44:54] -rw-r--r--. 1 boinc boinc      8192 Jun  3 15:44 boinc_mmap_file
[2025-06-03 15:44:54] -rw-r--r--. 1 boinc boinc        28 Jun  3 15:44 wrapper_checkpoint.txt
[2025-06-03 15:44:54] -rw-------. 1 boinc boinc      7687 Jun  3 15:44 heartbeat.json
[2025-06-03 15:44:54] -rw-------. 1 boinc boinc      4539 Jun  3 15:44 pilotlog.txt
[2025-06-03 15:44:54] -rw-------. 1 boinc boinc   1215022 Jun  3 15:44 log.45006595._012642.job.log.1
[2025-06-03 15:44:54] -rw-------. 1 boinc boinc       357 Jun  3 15:44 output.list
[2025-06-03 15:44:54] -rw-r--r--. 1 boinc boinc       620 Jun  3 15:44 runtime_log
[2025-06-03 15:44:54] -rw-------. 1 boinc boinc   1617920 Jun  3 15:44 result.tar.gz
[2025-06-03 15:44:54] -rw-r--r--. 1 boinc boinc      8659 Jun  3 15:44 runtime_log.err
[2025-06-03 15:44:54] -rw-------. 1 boinc boinc       656 Jun  3 15:44 lMgMDmB5Rg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnqgKDmMnyeum.diag
[2025-06-03 15:44:54] -rw-r--r--. 1 boinc boinc     20512 Jun  3 15:44 stderr.txt
[2025-06-03 15:44:54] HITS file was successfully produced:
[2025-06-03 15:44:54] -rw-------. 1 boinc boinc 172477692 Jun  3 15:43 shared/HITS.pool.root.1
[2025-06-03 15:44:54]  *** Contents of shared directory: ***
[2025-06-03 15:44:54] total 381704
[2025-06-03 15:44:54] -rw-r--r--. 2 boinc boinc 216237362 Jun  3 11:48 ATLAS.root_0
[2025-06-03 15:44:54] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:48 start_atlas.sh
[2025-06-03 15:44:54] -rw-r--r--. 2 boinc boinc    508876 Jun  3 11:48 input.tar.gz
[2025-06-03 15:44:54] -rw-------. 1 boinc boinc 172477692 Jun  3 15:43 HITS.pool.root.1
[2025-06-03 15:44:54] -rw-------. 1 boinc boinc   1617920 Jun  3 15:44 result.tar.gz
15:44:56 (6999): run_atlas exited; CPU time 48973.863757
15:44:56 (6999): called boinc_finish(0)

</stderr_txt>
]]>

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