Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:19:11 (895794): wrapper (7.7.26015): starting
09:19:11 (895794): wrapper: running run_atlas (--nthreads 2)
[2025-06-03 09:19:11] Arguments: --nthreads 2
[2025-06-03 09:19:11] Threads: 2
[2025-06-03 09:19:11] Checking for CVMFS
[2025-06-03 09:19:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:19:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:19:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:19:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:19:11] 2.9.2.0 729231 724 53140 146731 0 56 31434284 36864001 0 130560 0 445941 99.988 215841 74944 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-03 09:19:11] CVMFS is ok
[2025-06-03 09:19:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 09:19:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 09:19:11] Further information can be found at the LHC@home message board.
[2025-06-03 09:19:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:19:11] Checking for apptainer binary...
[2025-06-03 09:19:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:19:11] Running /usr/bin/apptainer --version
[2025-06-03 09:19:12] apptainer version 1.3.6-6.1
[2025-06-03 09:19:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:19:12] thA354a
[2025-06-03 09:19:12] apptainer works
[2025-06-03 09:19:12] Set ATHENA_PROC_NUMBER=2
[2025-06-03 09:19:12] Set ATHENA_CORE_NUMBER=2
[2025-06-03 09:19:12] Starting ATLAS job with PandaID=6677402066
[2025-06-03 09:19:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:10:25]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:10:25] 2025-06-03 09:10:13,349 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:10:25] 2025-06-03 09:10:13,349 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:10:25] 2025-06-03 09:10:13,349 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:10:25] 2025-06-03 09:10:13,349 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:10:25] 2025-06-03 09:10:13,350 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:10:25] 2025-06-03 09:10:13,350 | INFO     | sum of square deviations: 401533110.0
[2025-06-03 11:10:25] 2025-06-03 09:10:13,350 | INFO     | sum of deviations: -1691030531.9999971
[2025-06-03 11:10:25] 2025-06-03 09:10:13,350 | INFO     | mean x: 1748938488.0
[2025-06-03 11:10:25] 2025-06-03 09:10:13,350 | INFO     | mean y: 2270954.376146789
[2025-06-03 11:10:25] 2025-06-03 09:10:13,350 | INFO     | -- intersect: 7367811449.400106
[2025-06-03 11:10:25] 2025-06-03 09:10:13,350 | INFO     | intersect: 7367811449.400106
[2025-06-03 11:10:25] 2025-06-03 09:10:13,351 | INFO     | chi2: 2.417553362114199
[2025-06-03 11:10:25] 2025-06-03 09:10:13,351 | INFO     | sum of square deviations: 348769330.0
[2025-06-03 11:10:25] 2025-06-03 09:10:13,351 | INFO     | sum of deviations: 5126223510.999999
[2025-06-03 11:10:25] 2025-06-03 09:10:13,351 | INFO     | mean x: 1748938335.5
[2025-06-03 11:10:25] 2025-06-03 09:10:13,351 | INFO     | mean y: 2289914.9615384615
[2025-06-03 11:10:25] 2025-06-03 09:10:13,351 | INFO     | -- intersect: -25703665407.226063
[2025-06-03 11:10:25] 2025-06-03 09:10:13,351 | INFO     | intersect: -25703665407.226063
[2025-06-03 11:10:25] 2025-06-03 09:10:13,351 | INFO     | chi2: 1.5747722005507896
[2025-06-03 11:10:25] 2025-06-03 09:10:13,351 | INFO     | current chi2=1.5747722005507896 (change=34.860912473360266 %)
[2025-06-03 11:10:25] 2025-06-03 09:10:13,351 | INFO     | sum of square deviations: 300842850.0
[2025-06-03 11:10:25] 2025-06-03 09:10:13,351 | INFO     | sum of deviations: 4903516048.999994
[2025-06-03 11:10:25] 2025-06-03 09:10:13,351 | INFO     | mean x: 1748938183.0
[2025-06-03 11:10:25] 2025-06-03 09:10:13,351 | INFO     | mean y: 2289206.5353535353
[2025-06-03 11:10:25] 2025-06-03 09:10:13,351 | INFO     | -- intersect: -28504110227.75198
[2025-06-03 11:10:25] 2025-06-03 09:10:13,351 | INFO     | intersect: -28504110227.75198
[2025-06-03 11:10:25] 2025-06-03 09:10:13,352 | INFO     | chi2: 1.577933988165476
[2025-06-03 11:10:25] 2025-06-03 09:10:13,352 | INFO     | current chi2=1.577933988165476 (change=-0.20077745934176813 %)
[2025-06-03 11:10:25] 2025-06-03 09:10:13,352 | INFO     | right removable region: 98
[2025-06-03 11:10:25] 2025-06-03 09:10:13,352 | INFO     | sum of square deviations: 348769330.0
[2025-06-03 11:10:25] 2025-06-03 09:10:13,352 | INFO     | sum of deviations: -13333368806.5
[2025-06-03 11:10:25] 2025-06-03 09:10:13,352 | INFO     | mean x: 1748938640.5
[2025-06-03 11:10:25] 2025-06-03 09:10:13,352 | INFO     | mean y: 2303494.375
[2025-06-03 11:10:25] 2025-06-03 09:10:13,352 | INFO     | -- intersect: 66863813116.58065
[2025-06-03 11:10:25] 2025-06-03 09:10:13,352 | INFO     | intersect: 66863813116.58065
[2025-06-03 11:10:25] 2025-06-03 09:10:13,352 | INFO     | chi2: 1.0351650521501934
[2025-06-03 11:10:25] 2025-06-03 09:10:13,352 | INFO     | current chi2=1.0351650521501934 (change=57.181294594262 %)
[2025-06-03 11:10:25] 2025-06-03 09:10:13,352 | INFO     | sum of square deviations: 300842850.0
[2025-06-03 11:10:25] 2025-06-03 09:10:13,352 | INFO     | sum of deviations: -7487121212.0
[2025-06-03 11:10:25] 2025-06-03 09:10:13,352 | INFO     | mean x: 1748938793.0
[2025-06-03 11:10:25] 2025-06-03 09:10:13,352 | INFO     | mean y: 2284871.0404040404
[2025-06-03 11:10:25] 2025-06-03 09:10:13,352 | INFO     | -- intersect: 43528387404.50589
[2025-06-03 11:10:25] 2025-06-03 09:10:13,352 | INFO     | intersect: 43528387404.50589
[2025-06-03 11:10:25] 2025-06-03 09:10:13,352 | INFO     | chi2: 0.9498151850202947
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | current chi2=0.9498151850202947 (change=8.245049130340536 %)
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | left removable region: 20
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | sum of square deviations: 147126479.5
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | sum of deviations: 397479080.50000006
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | mean x: 1748938762.5
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | mean y: 2300997.576923077
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | -- intersect: -4722657918.940263
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | intersect: -4722657918.940263
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | chi2: 0.0017002807858684818
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | -- intersect: -4722657918.940263
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | current memory leak: 2.70 B/s (using 78 data points, chi2=0.00)
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | ..............................
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | . Timing measurements:
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | . get job = 0 s
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | . initial setup = 1 s
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | . payload setup = 8 s
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | . stage-in = 0 s
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | . payload execution = 6604 s
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | . stage-out = 0 s
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | . log creation = 0 s
[2025-06-03 11:10:25] 2025-06-03 09:10:13,353 | INFO     | ..............................
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | 
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | job summary report
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | --------------------------------------------------
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | PanDA job id: 6677402066
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | task id: 45006595
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | errors: (none)
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | pilot state: finished 
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | transexitcode: 0
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | exeerrorcode: 0
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | exeerrordiag: 
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | exitcode: 0
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | exitmsg: OK
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | cpuconsumptiontime: 12827 s
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | nevents: 400
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | neventsw: 0
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | pid: 905879
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | pgrp: 905879
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | corecount: 2
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | event service: False
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | sizes: {0: 2405185, 8: 2405391, 11: 2405419, 6617: 2432483, 6619: 2441430, 6622: 2441486, 6631: 2441784}
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | --------------------------------------------------
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | 
[2025-06-03 11:10:25] 2025-06-03 09:10:13,383 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-03 11:10:25] 2025-06-03 09:10:13,394 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,394 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,394 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,394 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,394 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,394 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,395 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,395 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,395 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,395 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,395 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,395 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,395 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,395 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,395 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,395 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,395 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,395 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:10:25] 2025-06-03 09:10:13,395 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,395 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:10:25] 2025-06-03 09:10:13,395 | INFO     | job 6677402066 has completed (purged errors)
[2025-06-03 11:10:25] 2025-06-03 09:10:13,395 | INFO     | overall cleanup function is called
[2025-06-03 11:10:25] 2025-06-03 09:10:14,401 | INFO     | --- collectZombieJob: --- 10, [905879]
[2025-06-03 11:10:25] 2025-06-03 09:10:14,402 | INFO     | zombie collector waiting for pid 905879
[2025-06-03 11:10:25] 2025-06-03 09:10:14,402 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:10:25] 2025-06-03 09:10:14,402 | INFO     | collected zombie processes
[2025-06-03 11:10:25] 2025-06-03 09:10:14,402 | INFO     | will attempt to kill all subprocesses of pid=905879
[2025-06-03 11:10:25] 2025-06-03 09:10:14,435 | INFO     | process IDs to be killed: [905879] (in reverse order)
[2025-06-03 11:10:25] 2025-06-03 09:10:14,457 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:10:25] 2025-06-03 09:10:14,458 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:10:25] 2025-06-03 09:10:14,461 | INFO     | did not find any defunct processes belonging to 905879
[2025-06-03 11:10:25] 2025-06-03 09:10:14,465 | INFO     | did not find any defunct processes belonging to 905879
[2025-06-03 11:10:25] 2025-06-03 09:10:14,465 | INFO     | ready for new job
[2025-06-03 11:10:25] 2025-06-03 09:10:14,465 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:10:25] 2025-06-03 09:10:14,467 | INFO     | **************************************
[2025-06-03 11:10:25] 2025-06-03 09:10:14,468 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:10:25] 2025-06-03 09:10:14,468 | INFO     | **************************************
[2025-06-03 11:10:25] 2025-06-03 09:10:14,468 | INFO     | 
[2025-06-03 11:10:25] 2025-06-03 09:10:14,469 | INFO     | architecture information:
[2025-06-03 11:10:25] 2025-06-03 09:10:14,470 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:10:25] 2025-06-03 09:10:14,499 | INFO     | cat /etc/os-release:
[2025-06-03 11:10:25] NAME="CentOS Linux"
[2025-06-03 11:10:25] VERSION="7 (Core)"
[2025-06-03 11:10:25] ID="centos"
[2025-06-03 11:10:25] ID_LIKE="rhel fedora"
[2025-06-03 11:10:25] VERSION_ID="7"
[2025-06-03 11:10:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:10:25] ANSI_COLOR="0;31"
[2025-06-03 11:10:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:10:25] HOME_URL="https://www.centos.org/"
[2025-06-03 11:10:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:10:25] 
[2025-06-03 11:10:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:10:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:10:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:10:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:10:25] 
[2025-06-03 11:10:25] 2025-06-03 09:10:14,500 | INFO     | **************************************
[2025-06-03 11:10:25] 2025-06-03 09:10:15,004 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-03 11:10:25] 2025-06-03 09:10:15,016 | INFO     | sufficient remaining disk space (192823689216 B)
[2025-06-03 11:10:25] 2025-06-03 09:10:15,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:10:25] 2025-06-03 09:10:15,016 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:10:25] 2025-06-03 09:10:15,016 | INFO     | update_server=False
[2025-06-03 11:10:25] 2025-06-03 09:10:15,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:10:25] 2025-06-03 09:10:15,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:10:25] 2025-06-03 09:10:15,016 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:10:25] 2025-06-03 09:10:15,330 | INFO     | PID=899416 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-03 11:10:25] 2025-06-03 09:10:15,330 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:10:25] 2025-06-03 09:10:15,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:10:25] 2025-06-03 09:10:15,330 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:10:25] 2025-06-03 09:10:15,353 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 11:10:25] 2025-06-03 09:10:15,353 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 11:10:25] 2025-06-03 09:10:15,353 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:10:25] 2025-06-03 09:10:15,353 | INFO     | will abort loop
[2025-06-03 11:10:25] 2025-06-03 09:10:15,498 | INFO     | all job control threads have been joined
[2025-06-03 11:10:25] 2025-06-03 09:10:15,868 | INFO     | all data control threads have been joined
[2025-06-03 11:10:25] 2025-06-03 09:10:16,018 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:10:25] 2025-06-03 09:10:16,021 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:10:25] 2025-06-03 09:10:16,346 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:10:25] 2025-06-03 09:10:16,359 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:10:25] 2025-06-03 09:10:16,360 | INFO     | all payload control threads have been joined
[2025-06-03 11:10:25] 2025-06-03 09:10:16,382 | INFO     | [job] validate thread has finished
[2025-06-03 11:10:25] 2025-06-03 09:10:16,386 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:10:25] 2025-06-03 09:10:16,402 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:10:25] 2025-06-03 09:10:16,416 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:10:25] 2025-06-03 09:10:16,416 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:10:25] 2025-06-03 09:10:16,504 | INFO     | [job] control thread has finished
[2025-06-03 11:10:25] 2025-06-03 09:10:16,815 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:10:25] 2025-06-03 09:10:16,870 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:10:25] 2025-06-03 09:10:16,874 | INFO     | [data] control thread has finished
[2025-06-03 11:10:25] 2025-06-03 09:10:17,212 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:10:25] 2025-06-03 09:10:17,364 | INFO     | [payload] control thread has finished
[2025-06-03 11:10:25] 2025-06-03 09:10:18,408 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:10:25] 2025-06-03 09:10:19,023 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:10:25] 2025-06-03 09:10:19,890 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140118712190784)>', '<ExcThread(monitor, started 140117972858624)>']
[2025-06-03 11:10:25] 2025-06-03 09:10:20,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:10:25] 2025-06-03 09:10:20,357 | INFO     | [monitor] control thread has ended
[2025-06-03 11:10:25] 2025-06-03 09:10:24,916 | INFO     | all workflow threads have been joined
[2025-06-03 11:10:25] 2025-06-03 09:10:24,917 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:10:25] 2025-06-03 09:10:24,917 | INFO     | traces error code: 0
[2025-06-03 11:10:25] 2025-06-03 09:10:24,918 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:10:25] 2025-06-03 09:10:24,959 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:10:25] 2025-06-03 09:10:24,962 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:10:25] 2025-06-03 09:10:24,964 [wrapper] pilotpid: 899416
[2025-06-03 11:10:25] 2025-06-03 09:10:24,966 [wrapper] Pilot exit status: 0
[2025-06-03 11:10:25] 2025-06-03 09:10:24,973 [wrapper] pandaids: 6677402066
[2025-06-03 11:10:25] 2025-06-03 09:10:24,985 [wrapper] cleanup supervisor_pilot  920201 899417
[2025-06-03 11:10:25] 2025-06-03 09:10:24,987 [wrapper] Test setup, not cleaning
[2025-06-03 11:10:25] 2025-06-03 09:10:24,990 [wrapper] apfmon messages muted
[2025-06-03 11:10:25] 2025-06-03 09:10:24,992 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:10:25] 2025-06-03 09:10:24,994 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:10:25]  *** Error codes and diagnostics ***
[2025-06-03 11:10:25]     "exeErrorCode": 0,
[2025-06-03 11:10:25]     "exeErrorDiag": "",
[2025-06-03 11:10:25]     "pilotErrorCode": 0,
[2025-06-03 11:10:25]     "pilotErrorDiag": "",
[2025-06-03 11:10:25]  *** Listing of results directory ***
[2025-06-03 11:10:25] total 392976
[2025-06-03 11:10:25] -rw-r--r-- 1 boinc boinc    495897 Jun  2 23:29 pilot3.tar.gz
[2025-06-03 11:10:25] -rw-r--r-- 1 boinc boinc      5111 Jun  2 23:33 queuedata.json
[2025-06-03 11:10:25] -rwx------ 1 boinc boinc     37140 Jun  2 23:36 runpilot2-wrapper.sh
[2025-06-03 11:10:25] -rw-r--r-- 1 boinc boinc       100 Jun  3 09:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:10:25] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 09:19 run_atlas
[2025-06-03 11:10:25] -rw-r--r-- 1 boinc boinc       105 Jun  3 09:19 job.xml
[2025-06-03 11:10:25] -rw-r--r-- 2 boinc boinc 216013278 Jun  3 09:19 EVNT.45006593._000501.pool.root.1
[2025-06-03 11:10:25] -rw-r--r-- 1 boinc boinc      6690 Jun  3 09:19 init_data.xml
[2025-06-03 11:10:25] drwxrwx--x 2 boinc boinc      4096 Jun  3 09:19 shared
[2025-06-03 11:10:25] -rw-r--r-- 2 boinc boinc    508881 Jun  3 09:19 input.tar.gz
[2025-06-03 11:10:25] -rw-r--r-- 2 boinc boinc     15093 Jun  3 09:19 start_atlas.sh
[2025-06-03 11:10:25] -rw-r--r-- 1 boinc boinc         0 Jun  3 09:19 boinc_lockfile
[2025-06-03 11:10:25] -rw-r--r-- 1 boinc boinc      2524 Jun  3 09:19 pandaJob.out
[2025-06-03 11:10:25] -rw------- 1 boinc boinc    986901 Jun  3 09:19 agis_schedconf.cvmfs.json
[2025-06-03 11:10:25] -rw------- 1 boinc boinc   1603667 Jun  3 09:19 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:10:25] drwx------ 4 boinc boinc      4096 Jun  3 09:19 pilot3
[2025-06-03 11:10:25] -rw------- 1 boinc boinc 180829318 Jun  3 11:09 HITS.45006595._012520.pool.root.1
[2025-06-03 11:10:25] -rw-r--r-- 1 boinc boinc       529 Jun  3 11:09 boinc_task_state.xml
[2025-06-03 11:10:25] -rw------- 1 boinc boinc        95 Jun  3 11:09 pilot_heartbeat.json
[2025-06-03 11:10:25] -rw------- 1 boinc boinc      1017 Jun  3 11:09 memory_monitor_summary.json
[2025-06-03 11:10:25] -rw------- 1 boinc boinc    235123 Jun  3 11:10 log.45006595._012520.job.log.tgz.1
[2025-06-03 11:10:25] -rw-r--r-- 1 boinc boinc      8192 Jun  3 11:10 boinc_mmap_file
[2025-06-03 11:10:25] -rw-r--r-- 1 boinc boinc        27 Jun  3 11:10 wrapper_checkpoint.txt
[2025-06-03 11:10:25] -rw------- 1 boinc boinc      7652 Jun  3 11:10 heartbeat.json
[2025-06-03 11:10:25] -rw------- 1 boinc boinc      4861 Jun  3 11:10 pilotlog.txt
[2025-06-03 11:10:25] -rw------- 1 boinc boinc    631563 Jun  3 11:10 log.45006595._012520.job.log.1
[2025-06-03 11:10:25] -rw------- 1 boinc boinc       357 Jun  3 11:10 output.list
[2025-06-03 11:10:25] -rw-r--r-- 1 boinc boinc       620 Jun  3 11:10 runtime_log
[2025-06-03 11:10:25] -rw------- 1 boinc boinc    880640 Jun  3 11:10 result.tar.gz
[2025-06-03 11:10:25] -rw-r--r-- 1 boinc boinc      8738 Jun  3 11:10 runtime_log.err
[2025-06-03 11:10:25] -rw------- 1 boinc boinc       660 Jun  3 11:10 S56NDmH0Rg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUpgKDm5ZZu3m.diag
[2025-06-03 11:10:25] -rw-r--r-- 1 boinc boinc     20850 Jun  3 11:10 stderr.txt
[2025-06-03 11:10:25] HITS file was successfully produced:
[2025-06-03 11:10:25] -rw------- 1 boinc boinc 180829318 Jun  3 11:09 shared/HITS.pool.root.1
[2025-06-03 11:10:25]  *** Contents of shared directory: ***
[2025-06-03 11:10:25] total 388928
[2025-06-03 11:10:25] -rw-r--r-- 2 boinc boinc 216013278 Jun  3 09:19 ATLAS.root_0
[2025-06-03 11:10:25] -rw-r--r-- 2 boinc boinc    508881 Jun  3 09:19 input.tar.gz
[2025-06-03 11:10:25] -rw-r--r-- 2 boinc boinc     15093 Jun  3 09:19 start_atlas.sh
[2025-06-03 11:10:25] -rw------- 1 boinc boinc 180829318 Jun  3 11:09 HITS.pool.root.1
[2025-06-03 11:10:25] -rw------- 1 boinc boinc    880640 Jun  3 11:10 result.tar.gz
11:10:27 (895794): run_atlas exited; CPU time 12853.419707
11:10:27 (895794): called boinc_finish(0)

</stderr_txt>
]]>

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