Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:28:09 (1021627): wrapper (7.7.26015): starting
09:28:09 (1021627): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 09:28:09] Arguments: --nthreads 3
[2025-06-05 09:28:09] Threads: 3
[2025-06-05 09:28:09] Checking for CVMFS
[2025-06-05 09:28:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 09:28:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 09:28:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 09:28:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 09:28:09] 2.12.7.0 68668 7169 48060 146810 3 55 6545391 10240000 0 130560 0 2533575 99.982 1627442 1407 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2025-06-05 09:28:09] CVMFS is ok
[2025-06-05 09:28:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 09:28:09] Checking for apptainer binary...
[2025-06-05 09:28:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 09:28:09] Running /usr/bin/apptainer --version
[2025-06-05 09:28:09] apptainer version 1.3.4
[2025-06-05 09:28:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 09:28:09] ahanlst03
[2025-06-05 09:28:09] apptainer works
[2025-06-05 09:28:09] Set ATHENA_PROC_NUMBER=3
[2025-06-05 09:28:09] Set ATHENA_CORE_NUMBER=3
[2025-06-05 09:28:09] Starting ATLAS job with PandaID=6677402199
[2025-06-05 09:28:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 14:16:07]  *** The last 200 lines of the pilot log: ***
[2025-06-05 14:16:07] 2025-06-05 12:15:55,002 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 14:16:07] 2025-06-05 12:15:55,002 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6677402199/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:16:07] 2025-06-05 12:15:55,003 | INFO     | extracted standard info from prmon json
[2025-06-05 14:16:07] 2025-06-05 12:15:55,003 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 14:16:07] 2025-06-05 12:15:55,003 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 14:16:07] 2025-06-05 12:15:55,004 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 14:16:07] 2025-06-05 12:15:55,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 14:16:07] 2025-06-05 12:15:55,010 | INFO     | fitting pss+swap vs Time
[2025-06-05 14:16:07] 2025-06-05 12:15:55,010 | INFO     | sum of square deviations: 7028008982.0
[2025-06-05 14:16:07] 2025-06-05 12:15:55,013 | INFO     | sum of deviations: -98862982979.0
[2025-06-05 14:16:07] 2025-06-05 12:15:55,013 | INFO     | mean x: 1749117132.0
[2025-06-05 14:16:07] 2025-06-05 12:15:55,013 | INFO     | mean y: 2351346.0600706716
[2025-06-05 14:16:07] 2025-06-05 12:15:55,013 | INFO     | -- intersect: 24607177220.93874
[2025-06-05 14:16:07] 2025-06-05 12:15:55,014 | INFO     | intersect: 24607177220.93874
[2025-06-05 14:16:07] 2025-06-05 12:15:55,014 | INFO     | chi2: 2.5511091578491136
[2025-06-05 14:16:07] 2025-06-05 12:15:55,014 | INFO     | sum of square deviations: 6662039329.5
[2025-06-05 14:16:07] 2025-06-05 12:15:55,017 | INFO     | sum of deviations: -80693108911.0
[2025-06-05 14:16:07] 2025-06-05 12:15:55,017 | INFO     | mean x: 1749116979.5
[2025-06-05 14:16:07] 2025-06-05 12:15:55,017 | INFO     | mean y: 2358822.3956834534
[2025-06-05 14:16:07] 2025-06-05 12:15:55,017 | INFO     | -- intersect: 21188317046.912174
[2025-06-05 14:16:07] 2025-06-05 12:15:55,018 | INFO     | intersect: 21188317046.912174
[2025-06-05 14:16:07] 2025-06-05 12:15:55,018 | INFO     | chi2: 1.9027813637195183
[2025-06-05 14:16:07] 2025-06-05 12:15:55,018 | INFO     | current chi2=1.9027813637195183 (change=25.41356539506966 %)
[2025-06-05 14:16:07] 2025-06-05 12:15:55,018 | INFO     | sum of square deviations: 6309000152.0
[2025-06-05 14:16:07] 2025-06-05 12:15:55,021 | INFO     | sum of deviations: -78986142251.00002
[2025-06-05 14:16:07] 2025-06-05 12:15:55,022 | INFO     | mean x: 1749116827.0
[2025-06-05 14:16:07] 2025-06-05 12:15:55,022 | INFO     | mean y: 2359559.8205128205
[2025-06-05 14:16:07] 2025-06-05 12:15:55,022 | INFO     | -- intersect: 21900598136.85452
[2025-06-05 14:16:07] 2025-06-05 12:15:55,023 | INFO     | intersect: 21900598136.85452
[2025-06-05 14:16:07] 2025-06-05 12:15:55,023 | INFO     | chi2: 1.8963958897744448
[2025-06-05 14:16:07] 2025-06-05 12:15:55,024 | INFO     | current chi2=1.8963958897744448 (change=0.3355863194177654 %)
[2025-06-05 14:16:07] 2025-06-05 12:15:55,024 | INFO     | right removable region: 272
[2025-06-05 14:16:07] 2025-06-05 12:15:55,025 | INFO     | sum of square deviations: 6662039329.5
[2025-06-05 14:16:07] 2025-06-05 12:15:55,030 | INFO     | sum of deviations: -129003999930.99997
[2025-06-05 14:16:07] 2025-06-05 12:15:55,030 | INFO     | mean x: 1749117284.5
[2025-06-05 14:16:07] 2025-06-05 12:15:55,030 | INFO     | mean y: 2363749.129496403
[2025-06-05 14:16:07] 2025-06-05 12:15:55,031 | INFO     | -- intersect: 33872341827.73142
[2025-06-05 14:16:07] 2025-06-05 12:15:55,031 | INFO     | intersect: 33872341827.73142
[2025-06-05 14:16:07] 2025-06-05 12:15:55,032 | INFO     | chi2: 1.2565276156002647
[2025-06-05 14:16:07] 2025-06-05 12:15:55,032 | INFO     | current chi2=1.2565276156002647 (change=50.745831014943086 %)
[2025-06-05 14:16:07] 2025-06-05 12:15:55,033 | INFO     | sum of square deviations: 6309000152.0
[2025-06-05 14:16:07] 2025-06-05 12:15:55,037 | INFO     | sum of deviations: -116421695302.0
[2025-06-05 14:16:07] 2025-06-05 12:15:55,038 | INFO     | mean x: 1749117437.0
[2025-06-05 14:16:07] 2025-06-05 12:15:55,038 | INFO     | mean y: 2358307.282051282
[2025-06-05 14:16:07] 2025-06-05 12:15:55,038 | INFO     | -- intersect: 32279297979.45424
[2025-06-05 14:16:07] 2025-06-05 12:15:55,038 | INFO     | intersect: 32279297979.45424
[2025-06-05 14:16:07] 2025-06-05 12:15:55,039 | INFO     | chi2: 1.2377015054249036
[2025-06-05 14:16:07] 2025-06-05 12:15:55,039 | INFO     | current chi2=1.2377015054249036 (change=1.4982647370123665 %)
[2025-06-05 14:16:07] 2025-06-05 12:15:55,040 | INFO     | left removable region: 20
[2025-06-05 14:16:07] 2025-06-05 12:15:55,040 | INFO     | sum of square deviations: 4962187923.0
[2025-06-05 14:16:07] 2025-06-05 12:15:55,044 | INFO     | sum of deviations: -69826194310.0
[2025-06-05 14:16:07] 2025-06-05 12:15:55,044 | INFO     | mean x: 1749117406.5
[2025-06-05 14:16:07] 2025-06-05 12:15:55,045 | INFO     | mean y: 2354152.777777778
[2025-06-05 14:16:07] 2025-06-05 12:15:55,045 | INFO     | -- intersect: 24615330080.427315
[2025-06-05 14:16:07] 2025-06-05 12:15:55,045 | INFO     | intersect: 24615330080.427315
[2025-06-05 14:16:07] 2025-06-05 12:15:55,046 | INFO     | chi2: 0.4971780356080193
[2025-06-05 14:16:07] 2025-06-05 12:15:55,046 | INFO     | -- intersect: 24615330080.427315
[2025-06-05 14:16:07] 2025-06-05 12:15:55,046 | INFO     | current memory leak: -14.07 B/s (using 252 data points, chi2=0.50)
[2025-06-05 14:16:07] 2025-06-05 12:15:55,047 | INFO     | ..............................
[2025-06-05 14:16:07] 2025-06-05 12:15:55,047 | INFO     | . Timing measurements:
[2025-06-05 14:16:07] 2025-06-05 12:15:55,048 | INFO     | . get job = 0 s
[2025-06-05 14:16:07] 2025-06-05 12:15:55,048 | INFO     | . initial setup = 2 s
[2025-06-05 14:16:07] 2025-06-05 12:15:55,048 | INFO     | . payload setup = 8 s
[2025-06-05 14:16:07] 2025-06-05 12:15:55,048 | INFO     | . stage-in = 0 s
[2025-06-05 14:16:07] 2025-06-05 12:15:55,048 | INFO     | . payload execution = 17209 s
[2025-06-05 14:16:07] 2025-06-05 12:15:55,048 | INFO     | . stage-out = 4 s
[2025-06-05 14:16:07] 2025-06-05 12:15:55,049 | INFO     | . log creation = 0 s
[2025-06-05 14:16:07] 2025-06-05 12:15:55,049 | INFO     | ..............................
[2025-06-05 14:16:07] 2025-06-05 12:15:55,175 | INFO     | 
[2025-06-05 14:16:07] 2025-06-05 12:15:55,176 | INFO     | job summary report
[2025-06-05 14:16:07] 2025-06-05 12:15:55,176 | INFO     | --------------------------------------------------
[2025-06-05 14:16:07] 2025-06-05 12:15:55,176 | INFO     | PanDA job id: 6677402199
[2025-06-05 14:16:07] 2025-06-05 12:15:55,176 | INFO     | task id: 45006595
[2025-06-05 14:16:07] 2025-06-05 12:15:55,176 | INFO     | errors: (none)
[2025-06-05 14:16:07] 2025-06-05 12:15:55,176 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 14:16:07] 2025-06-05 12:15:55,176 | INFO     | pilot state: finished 
[2025-06-05 14:16:07] 2025-06-05 12:15:55,176 | INFO     | transexitcode: 0
[2025-06-05 14:16:07] 2025-06-05 12:15:55,177 | INFO     | exeerrorcode: 0
[2025-06-05 14:16:07] 2025-06-05 12:15:55,177 | INFO     | exeerrordiag: 
[2025-06-05 14:16:07] 2025-06-05 12:15:55,177 | INFO     | exitcode: 0
[2025-06-05 14:16:07] 2025-06-05 12:15:55,177 | INFO     | exitmsg: OK
[2025-06-05 14:16:07] 2025-06-05 12:15:55,177 | INFO     | cpuconsumptiontime: 50859 s
[2025-06-05 14:16:07] 2025-06-05 12:15:55,177 | INFO     | nevents: 400
[2025-06-05 14:16:07] 2025-06-05 12:15:55,177 | INFO     | neventsw: 0
[2025-06-05 14:16:07] 2025-06-05 12:15:55,177 | INFO     | pid: 1031646
[2025-06-05 14:16:07] 2025-06-05 12:15:55,177 | INFO     | pgrp: 1031646
[2025-06-05 14:16:07] 2025-06-05 12:15:55,178 | INFO     | corecount: 3
[2025-06-05 14:16:07] 2025-06-05 12:15:55,178 | INFO     | event service: False
[2025-06-05 14:16:07] 2025-06-05 12:15:55,178 | INFO     | sizes: {0: 2397174, 1: 2397373, 5: 2397579, 12: 2397635, 17221: 2429404, 17222: 2429403, 17227: 2438542, 17228: 2438598, 17238: 2438768}
[2025-06-05 14:16:07] 2025-06-05 12:15:55,178 | INFO     | --------------------------------------------------
[2025-06-05 14:16:07] 2025-06-05 12:15:55,178 | INFO     | 
[2025-06-05 14:16:07] 2025-06-05 12:15:55,178 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-05 14:16:07] 2025-06-05 12:15:55,204 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,205 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,205 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,205 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,206 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,206 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,206 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,206 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,206 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,207 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,207 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,207 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,207 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,207 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,208 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,208 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,208 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,208 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 14:16:07] 2025-06-05 12:15:55,208 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,208 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 14:16:07] 2025-06-05 12:15:55,209 | INFO     | job 6677402199 has completed (purged errors)
[2025-06-05 14:16:07] 2025-06-05 12:15:55,209 | INFO     | overall cleanup function is called
[2025-06-05 14:16:07] 2025-06-05 12:15:56,218 | INFO     | --- collectZombieJob: --- 10, [1031646]
[2025-06-05 14:16:07] 2025-06-05 12:15:56,218 | INFO     | zombie collector waiting for pid 1031646
[2025-06-05 14:16:07] 2025-06-05 12:15:56,219 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 14:16:07] 2025-06-05 12:15:56,219 | INFO     | collected zombie processes
[2025-06-05 14:16:07] 2025-06-05 12:15:56,220 | INFO     | will attempt to kill all subprocesses of pid=1031646
[2025-06-05 14:16:07] 2025-06-05 12:15:56,369 | INFO     | process IDs to be killed: [1031646] (in reverse order)
[2025-06-05 14:16:07] 2025-06-05 12:15:56,430 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 14:16:07] 2025-06-05 12:15:56,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 14:16:07] 2025-06-05 12:15:56,435 | INFO     | did not find any defunct processes belonging to 1031646
[2025-06-05 14:16:07] 2025-06-05 12:15:56,439 | INFO     | did not find any defunct processes belonging to 1031646
[2025-06-05 14:16:07] 2025-06-05 12:15:56,439 | INFO     | ready for new job
[2025-06-05 14:16:07] 2025-06-05 12:15:56,440 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 14:16:07] 2025-06-05 12:15:56,443 | INFO     | **************************************
[2025-06-05 14:16:07] 2025-06-05 12:15:56,443 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 14:16:07] 2025-06-05 12:15:56,443 | INFO     | **************************************
[2025-06-05 14:16:07] 2025-06-05 12:15:56,443 | INFO     | 
[2025-06-05 14:16:07] 2025-06-05 12:15:56,444 | INFO     | architecture information:
[2025-06-05 14:16:07] 2025-06-05 12:15:56,445 | INFO     | executing command: cat /etc/os-release
[2025-06-05 14:16:07] 2025-06-05 12:15:56,467 | INFO     | cat /etc/os-release:
[2025-06-05 14:16:07] NAME="CentOS Linux"
[2025-06-05 14:16:07] VERSION="7 (Core)"
[2025-06-05 14:16:07] ID="centos"
[2025-06-05 14:16:07] ID_LIKE="rhel fedora"
[2025-06-05 14:16:07] VERSION_ID="7"
[2025-06-05 14:16:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 14:16:07] ANSI_COLOR="0;31"
[2025-06-05 14:16:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 14:16:07] HOME_URL="https://www.centos.org/"
[2025-06-05 14:16:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 14:16:07] 
[2025-06-05 14:16:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 14:16:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 14:16:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 14:16:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 14:16:07] 
[2025-06-05 14:16:07] 2025-06-05 12:15:56,468 | INFO     | **************************************
[2025-06-05 14:16:07] 2025-06-05 12:15:56,971 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-05 14:16:07] 2025-06-05 12:15:56,994 | INFO     | sufficient remaining disk space (33560723456 B)
[2025-06-05 14:16:07] 2025-06-05 12:15:56,995 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 14:16:07] 2025-06-05 12:15:56,995 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 14:16:07] 2025-06-05 12:15:56,995 | INFO     | update_server=False
[2025-06-05 14:16:07] 2025-06-05 12:15:56,996 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 14:16:07] 2025-06-05 12:15:56,996 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 14:16:07] 2025-06-05 12:15:56,997 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:16:07] 2025-06-05 12:15:56,997 | INFO     | aborting loop
[2025-06-05 14:16:07] 2025-06-05 12:15:56,997 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:16:07] 2025-06-05 12:15:57,227 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 14:16:07] 2025-06-05 12:15:57,228 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 14:16:07] 2025-06-05 12:15:57,228 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 14:16:07] 2025-06-05 12:15:57,488 | INFO     | all data control threads have been joined
[2025-06-05 14:16:07] 2025-06-05 12:15:57,615 | INFO     | all payload control threads have been joined
[2025-06-05 14:16:07] 2025-06-05 12:15:57,710 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 14:16:07] 2025-06-05 12:15:57,998 | INFO     | [job] queue monitor thread has finished
[2025-06-05 14:16:07] 2025-06-05 12:15:58,001 | INFO     | [job] retrieve thread has finished
[2025-06-05 14:16:07] 2025-06-05 12:15:58,002 | INFO     | [job] job monitor thread has finished
[2025-06-05 14:16:07] 2025-06-05 12:15:58,033 | INFO     | all job control threads have been joined
[2025-06-05 14:16:07] 2025-06-05 12:15:58,143 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 14:16:07] 2025-06-05 12:15:58,288 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 14:16:07] 2025-06-05 12:15:58,493 | INFO     | [data] control thread has finished
[2025-06-05 14:16:07] 2025-06-05 12:15:58,570 | INFO     | [payload] failed_post thread has finished
[2025-06-05 14:16:07] 2025-06-05 12:15:58,621 | INFO     | [payload] control thread has finished
[2025-06-05 14:16:07] 2025-06-05 12:15:58,934 | INFO     | [job] validate thread has finished
[2025-06-05 14:16:07] 2025-06-05 12:15:59,039 | INFO     | [job] control thread has finished
[2025-06-05 14:16:07] 2025-06-05 12:15:59,166 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 14:16:07] 2025-06-05 12:15:59,243 | INFO     | [payload] validate_post thread has finished
[2025-06-05 14:16:07] 2025-06-05 12:15:59,260 | INFO     | [data] copytool_in thread has finished
[2025-06-05 14:16:07] 2025-06-05 12:15:59,320 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 14:16:07] 2025-06-05 12:15:59,716 | INFO     | [data] copytool_out thread has finished
[2025-06-05 14:16:07] 2025-06-05 12:16:01,002 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 14:16:07] 2025-06-05 12:16:02,391 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129376430802752)>', '<ExcThread(monitor, started 129375907321600)>']
[2025-06-05 14:16:07] 2025-06-05 12:16:03,259 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 14:16:07] 2025-06-05 12:16:03,260 | INFO     | [monitor] control thread has ended
[2025-06-05 14:16:07] 2025-06-05 12:16:07,418 | INFO     | all workflow threads have been joined
[2025-06-05 14:16:07] 2025-06-05 12:16:07,418 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 14:16:07] 2025-06-05 12:16:07,419 | INFO     | traces error code: 0
[2025-06-05 14:16:07] 2025-06-05 12:16:07,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 14:16:07] 2025-06-05 12:16:07,612 [wrapper] ==== pilot stdout END ====
[2025-06-05 14:16:07] 2025-06-05 12:16:07,615 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 14:16:07] 2025-06-05 12:16:07,619 [wrapper] pilotpid: 1025215
[2025-06-05 14:16:07] 2025-06-05 12:16:07,623 [wrapper] Pilot exit status: 0
[2025-06-05 14:16:07] 2025-06-05 12:16:07,636 [wrapper] pandaids: 6677402199
[2025-06-05 14:16:07] 2025-06-05 12:16:07,663 [wrapper] cleanup supervisor_pilot 1060492 1025216
[2025-06-05 14:16:07] 2025-06-05 12:16:07,667 [wrapper] Test setup, not cleaning
[2025-06-05 14:16:07] 2025-06-05 12:16:07,670 [wrapper] apfmon messages muted
[2025-06-05 14:16:07] 2025-06-05 12:16:07,674 [wrapper] ==== wrapper stdout END ====
[2025-06-05 14:16:07] 2025-06-05 12:16:07,677 [wrapper] ==== wrapper stderr END ====
[2025-06-05 14:16:07]  *** Error codes and diagnostics ***
[2025-06-05 14:16:07]     "exeErrorCode": 0,
[2025-06-05 14:16:07]     "exeErrorDiag": "",
[2025-06-05 14:16:07]     "pilotErrorCode": 0,
[2025-06-05 14:16:07]     "pilotErrorDiag": "",
[2025-06-05 14:16:07]  *** Listing of results directory ***
[2025-06-05 14:16:07] total 390768
[2025-06-05 14:16:07] -rw-r--r-- 1 boinc boinc    495897 Jun  2 23:29 pilot3.tar.gz
[2025-06-05 14:16:07] -rwx------ 1 boinc boinc     37140 Jun  2 23:43 runpilot2-wrapper.sh
[2025-06-05 14:16:07] -rw-r--r-- 1 boinc boinc      5111 Jun  2 23:43 queuedata.json
[2025-06-05 14:16:07] -rw-r--r-- 1 boinc boinc       100 Jun  5 09:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 14:16:07] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 09:28 run_atlas
[2025-06-05 14:16:07] -rw-r--r-- 1 boinc boinc       105 Jun  5 09:28 job.xml
[2025-06-05 14:16:07] -rw-r--r-- 2 boinc boinc 215324526 Jun  5 09:28 EVNT.45006593._000505.pool.root.1
[2025-06-05 14:16:07] -rw-r--r-- 1 boinc boinc      9392 Jun  5 09:28 init_data.xml
[2025-06-05 14:16:07] -rw-r--r-- 2 boinc boinc     15093 Jun  5 09:28 start_atlas.sh
[2025-06-05 14:16:07] drwxrwx--x 2 boinc boinc      4096 Jun  5 09:28 shared
[2025-06-05 14:16:07] -rw-r--r-- 2 boinc boinc    508873 Jun  5 09:28 input.tar.gz
[2025-06-05 14:16:07] -rw-r--r-- 1 boinc boinc         0 Jun  5 09:28 boinc_lockfile
[2025-06-05 14:16:07] -rw-r--r-- 1 boinc boinc      2523 Jun  5 09:28 pandaJob.out
[2025-06-05 14:16:07] -rw------- 1 boinc boinc    983087 Jun  5 09:28 agis_schedconf.cvmfs.json
[2025-06-05 14:16:07] drwx------ 4 boinc boinc      4096 Jun  5 09:28 pilot3
[2025-06-05 14:16:07] -rw------- 1 boinc boinc 177211656 Jun  5 14:15 HITS.45006595._012604.pool.root.1
[2025-06-05 14:16:07] -rw------- 1 boinc boinc        95 Jun  5 14:15 pilot_heartbeat.json
[2025-06-05 14:16:07] -rw-r--r-- 1 boinc boinc       530 Jun  5 14:15 boinc_task_state.xml
[2025-06-05 14:16:07] -rw------- 1 boinc boinc      1015 Jun  5 14:15 memory_monitor_summary.json
[2025-06-05 14:16:07] -rw------- 1 boinc boinc   1598969 Jun  5 14:15 agis_ddmendpoints.agis.ALL.json
[2025-06-05 14:16:07] -rw------- 1 boinc boinc    327666 Jun  5 14:15 log.45006595._012604.job.log.tgz.1
[2025-06-05 14:16:07] -rw------- 1 boinc boinc      7647 Jun  5 14:15 heartbeat.json
[2025-06-05 14:16:07] -rw-r--r-- 1 boinc boinc        28 Jun  5 14:16 wrapper_checkpoint.txt
[2025-06-05 14:16:07] -rw-r--r-- 1 boinc boinc      8192 Jun  5 14:16 boinc_mmap_file
[2025-06-05 14:16:07] -rw------- 1 boinc boinc      4360 Jun  5 14:16 pilotlog.txt
[2025-06-05 14:16:07] -rw------- 1 boinc boinc   1561323 Jun  5 14:16 log.45006595._012604.job.log.1
[2025-06-05 14:16:07] -rw------- 1 boinc boinc       357 Jun  5 14:16 output.list
[2025-06-05 14:16:07] -rw-r--r-- 1 boinc boinc       620 Jun  5 14:16 runtime_log
[2025-06-05 14:16:07] -rw------- 1 boinc boinc   1904640 Jun  5 14:16 result.tar.gz
[2025-06-05 14:16:07] -rw------- 1 boinc boinc       652 Jun  5 14:16 XG4KDmJ7Rg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm4gWKDmHfbNCn.diag
[2025-06-05 14:16:07] -rw-r--r-- 1 boinc boinc      8766 Jun  5 14:16 runtime_log.err
[2025-06-05 14:16:07] -rw-r--r-- 1 boinc boinc     20530 Jun  5 14:16 stderr.txt
[2025-06-05 14:16:07] HITS file was successfully produced:
[2025-06-05 14:16:07] -rw------- 1 boinc boinc 177211656 Jun  5 14:15 shared/HITS.pool.root.1
[2025-06-05 14:16:07]  *** Contents of shared directory: ***
[2025-06-05 14:16:07] total 385724
[2025-06-05 14:16:07] -rw-r--r-- 2 boinc boinc 215324526 Jun  5 09:28 ATLAS.root_0
[2025-06-05 14:16:07] -rw-r--r-- 2 boinc boinc     15093 Jun  5 09:28 start_atlas.sh
[2025-06-05 14:16:07] -rw-r--r-- 2 boinc boinc    508873 Jun  5 09:28 input.tar.gz
[2025-06-05 14:16:07] -rw------- 1 boinc boinc 177211656 Jun  5 14:15 HITS.pool.root.1
[2025-06-05 14:16:07] -rw------- 1 boinc boinc   1904640 Jun  5 14:16 result.tar.gz
14:16:09 (1021627): run_atlas exited; CPU time 50944.506039
14:16:09 (1021627): called boinc_finish(0)

</stderr_txt>
]]>

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