Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:15:36 (1427): wrapper (7.7.26015): starting
15:15:36 (1427): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 15:15:36] Arguments: --nthreads 8
[2025-06-03 15:15:36] Threads: 8
[2025-06-03 15:15:36] Checking for CVMFS
[2025-06-03 15:15:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:15:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:15:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:15:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:15:37] 2.11.2.0 3966 31803 99412 146741 3 412 14727497 25165824 4009 130560 0 17307594 99.790 19125828 2121 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 15:15:37] CVMFS is ok
[2025-06-03 15:15:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:15:38] Checking for apptainer binary...
[2025-06-03 15:15:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:15:38] Running /usr/bin/apptainer --version
[2025-06-03 15:15:38] apptainer version 1.3.2-1.el7
[2025-06-03 15:15:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:15:39] cg-vwn439.simple-grid.lan
[2025-06-03 15:15:39] apptainer works
[2025-06-03 15:15:39] Set ATHENA_PROC_NUMBER=8
[2025-06-03 15:15:39] Set ATHENA_CORE_NUMBER=8
[2025-06-03 15:15:40] Starting ATLAS job with PandaID=6677401824
[2025-06-03 15:15:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:28:42]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:28:42] 2025-06-03 17:01:38,452 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:28:42] 2025-06-03 17:01:38,457 | INFO     | fitting pss+swap vs Time
[2025-06-03 19:28:42] 2025-06-03 17:01:38,458 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 19:28:42] 2025-06-03 17:01:38,460 | INFO     | sum of deviations: 59206258522.0
[2025-06-03 19:28:42] 2025-06-03 17:01:38,460 | INFO     | mean x: 1748963384.0
[2025-06-03 19:28:42] 2025-06-03 17:01:38,460 | INFO     | mean y: 2455658.5115207373
[2025-06-03 19:28:42] 2025-06-03 17:01:38,460 | INFO     | -- intersect: -32678890111.56906
[2025-06-03 19:28:42] 2025-06-03 17:01:38,460 | INFO     | intersect: -32678890111.56906
[2025-06-03 19:28:42] 2025-06-03 17:01:38,461 | INFO     | chi2: 5.266059144392817
[2025-06-03 19:28:42] 2025-06-03 17:01:38,469 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 19:28:42] 2025-06-03 17:01:38,470 | INFO     | sum of deviations: 73490642948.5
[2025-06-03 19:28:42] 2025-06-03 17:01:38,471 | INFO     | mean x: 1748963231.5
[2025-06-03 19:28:42] 2025-06-03 17:01:38,471 | INFO     | mean y: 2465634.702830189
[2025-06-03 19:28:42] 2025-06-03 17:01:38,471 | INFO     | -- intersect: -43502254848.08892
[2025-06-03 19:28:42] 2025-06-03 17:01:38,471 | INFO     | intersect: -43502254848.08892
[2025-06-03 19:28:42] 2025-06-03 17:01:38,471 | INFO     | chi2: 4.430034317868897
[2025-06-03 19:28:42] 2025-06-03 17:01:38,471 | INFO     | current chi2=4.430034317868897 (change=15.875720412561284 %)
[2025-06-03 19:28:42] 2025-06-03 17:01:38,472 | INFO     | right removable region: 211
[2025-06-03 19:28:42] 2025-06-03 17:01:38,472 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 19:28:42] 2025-06-03 17:01:38,474 | INFO     | sum of deviations: -9569118281.5
[2025-06-03 19:28:42] 2025-06-03 17:01:38,474 | INFO     | mean x: 1748963536.5
[2025-06-03 19:28:42] 2025-06-03 17:01:38,474 | INFO     | mean y: 2504570.3254716983
[2025-06-03 19:28:42] 2025-06-03 17:01:38,474 | INFO     | -- intersect: 5667196999.1783695
[2025-06-03 19:28:42] 2025-06-03 17:01:38,474 | INFO     | intersect: 5667196999.1783695
[2025-06-03 19:28:42] 2025-06-03 17:01:38,475 | INFO     | chi2: 1.343707101006906
[2025-06-03 19:28:42] 2025-06-03 17:01:38,475 | INFO     | current chi2=1.343707101006906 (change=74.4836306588456 %)
[2025-06-03 19:28:42] 2025-06-03 17:01:38,475 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 19:28:42] 2025-06-03 17:01:38,477 | INFO     | sum of deviations: -28198620365.00003
[2025-06-03 19:28:42] 2025-06-03 17:01:38,477 | INFO     | mean x: 1748963689.0
[2025-06-03 19:28:42] 2025-06-03 17:01:38,477 | INFO     | mean y: 2518386.6763285026
[2025-06-03 19:28:42] 2025-06-03 17:01:38,477 | INFO     | -- intersect: 17934543109.06351
[2025-06-03 19:28:42] 2025-06-03 17:01:38,478 | INFO     | intersect: 17934543109.06351
[2025-06-03 19:28:42] 2025-06-03 17:01:38,478 | INFO     | chi2: 0.9388934283151772
[2025-06-03 19:28:42] 2025-06-03 17:01:38,478 | INFO     | current chi2=0.9388934283151772 (change=30.126630453049025 %)
[2025-06-03 19:28:42] 2025-06-03 17:01:38,478 | INFO     | sum of square deviations: 2555770710.5
[2025-06-03 19:28:42] 2025-06-03 17:01:38,480 | INFO     | sum of deviations: -31090592789.0
[2025-06-03 19:28:42] 2025-06-03 17:01:38,480 | INFO     | mean x: 1748963841.5
[2025-06-03 19:28:42] 2025-06-03 17:01:38,480 | INFO     | mean y: 2520623.0594059406
[2025-06-03 19:28:42] 2025-06-03 17:01:38,481 | INFO     | -- intersect: 21278420834.04652
[2025-06-03 19:28:42] 2025-06-03 17:01:38,481 | INFO     | intersect: 21278420834.04652
[2025-06-03 19:28:42] 2025-06-03 17:01:38,481 | INFO     | chi2: 0.9137383147617437
[2025-06-03 19:28:42] 2025-06-03 17:01:38,481 | INFO     | current chi2=0.9137383147617437 (change=2.6792299098923023 %)
[2025-06-03 19:28:42] 2025-06-03 17:01:38,481 | INFO     | left removable region: 30
[2025-06-03 19:28:42] 2025-06-03 17:01:38,482 | INFO     | sum of square deviations: 1838657730.0
[2025-06-03 19:28:42] 2025-06-03 17:01:38,483 | INFO     | sum of deviations: -15610192128.99999
[2025-06-03 19:28:42] 2025-06-03 17:01:38,483 | INFO     | mean x: 1748964116.0
[2025-06-03 19:28:42] 2025-06-03 17:01:38,483 | INFO     | mean y: 2533144.0220994474
[2025-06-03 19:28:42] 2025-06-03 17:01:38,484 | INFO     | -- intersect: 14851227075.48406
[2025-06-03 19:28:42] 2025-06-03 17:01:38,484 | INFO     | intersect: 14851227075.48406
[2025-06-03 19:28:42] 2025-06-03 17:01:38,484 | INFO     | chi2: 0.013641355567324796
[2025-06-03 19:28:42] 2025-06-03 17:01:38,484 | INFO     | -- intersect: 14851227075.48406
[2025-06-03 19:28:42] 2025-06-03 17:01:38,484 | INFO     | current memory leak: -8.49 B/s (using 181 data points, chi2=0.01)
[2025-06-03 19:28:42] 2025-06-03 17:01:38,507 | INFO     | ..............................
[2025-06-03 19:28:42] 2025-06-03 17:01:38,507 | INFO     | . Timing measurements:
[2025-06-03 19:28:42] 2025-06-03 17:01:38,507 | INFO     | . get job = 0 s
[2025-06-03 19:28:42] 2025-06-03 17:01:38,507 | INFO     | . initial setup = 2 s
[2025-06-03 19:28:42] 2025-06-03 17:01:38,507 | INFO     | . payload setup = 33 s
[2025-06-03 19:28:42] 2025-06-03 17:01:38,507 | INFO     | . stage-in = 0 s
[2025-06-03 19:28:42] 2025-06-03 17:01:38,507 | INFO     | . payload execution = 13350 s
[2025-06-03 19:28:42] 2025-06-03 17:01:38,507 | INFO     | . stage-out = 2 s
[2025-06-03 19:28:42] 2025-06-03 17:01:38,507 | INFO     | . log creation = 0 s
[2025-06-03 19:28:42] 2025-06-03 17:01:38,508 | INFO     | ..............................
[2025-06-03 19:28:42] 2025-06-03 17:01:38,661 | INFO     | 
[2025-06-03 19:28:42] 2025-06-03 17:01:38,661 | INFO     | job summary report
[2025-06-03 19:28:42] 2025-06-03 17:01:38,662 | INFO     | --------------------------------------------------
[2025-06-03 19:28:42] 2025-06-03 17:01:38,662 | INFO     | PanDA job id: 6677401824
[2025-06-03 19:28:42] 2025-06-03 17:01:38,662 | INFO     | task id: 45006595
[2025-06-03 19:28:42] 2025-06-03 17:01:38,662 | INFO     | errors: (none)
[2025-06-03 19:28:42] 2025-06-03 17:01:38,662 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:28:42] 2025-06-03 17:01:38,662 | INFO     | pilot state: finished 
[2025-06-03 19:28:42] 2025-06-03 17:01:38,662 | INFO     | transexitcode: 0
[2025-06-03 19:28:42] 2025-06-03 17:01:38,662 | INFO     | exeerrorcode: 0
[2025-06-03 19:28:42] 2025-06-03 17:01:38,662 | INFO     | exeerrordiag: 
[2025-06-03 19:28:42] 2025-06-03 17:01:38,662 | INFO     | exitcode: 0
[2025-06-03 19:28:42] 2025-06-03 17:01:38,663 | INFO     | exitmsg: OK
[2025-06-03 19:28:42] 2025-06-03 17:01:38,663 | INFO     | cpuconsumptiontime: 48304 s
[2025-06-03 19:28:42] 2025-06-03 17:01:38,663 | INFO     | nevents: 400
[2025-06-03 19:28:42] 2025-06-03 17:01:38,663 | INFO     | neventsw: 0
[2025-06-03 19:28:42] 2025-06-03 17:01:38,663 | INFO     | pid: 24597
[2025-06-03 19:28:42] 2025-06-03 17:01:38,663 | INFO     | pgrp: 24597
[2025-06-03 19:28:42] 2025-06-03 17:01:38,663 | INFO     | corecount: 8
[2025-06-03 19:28:42] 2025-06-03 17:01:38,663 | INFO     | event service: False
[2025-06-03 19:28:42] 2025-06-03 17:01:38,663 | INFO     | sizes: {0: 2405176, 1: 2405176, 12: 2405204, 13: 2405438, 22: 2405494, 13387: 2435170, 13388: 2435297, 13392: 2444350, 13477: 2444464}
[2025-06-03 19:28:42] 2025-06-03 17:01:38,663 | INFO     | --------------------------------------------------
[2025-06-03 19:28:42] 2025-06-03 17:01:38,663 | INFO     | 
[2025-06-03 19:28:42] 2025-06-03 17:01:38,664 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 19:28:42] 2025-06-03 17:01:39,146 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,146 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,146 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,146 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,146 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,146 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,146 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,147 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,147 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,147 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,147 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,147 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,147 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,147 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,147 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,147 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,147 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,148 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:28:42] 2025-06-03 17:01:39,148 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,148 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:28:42] 2025-06-03 17:01:39,148 | INFO     | job 6677401824 has completed (purged errors)
[2025-06-03 19:28:42] 2025-06-03 17:01:39,148 | INFO     | overall cleanup function is called
[2025-06-03 19:28:42] 2025-06-03 17:01:40,157 | INFO     | --- collectZombieJob: --- 10, [24597]
[2025-06-03 19:28:42] 2025-06-03 17:01:40,157 | INFO     | zombie collector waiting for pid 24597
[2025-06-03 19:28:42] 2025-06-03 17:01:40,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:28:42] 2025-06-03 17:01:40,158 | INFO     | collected zombie processes
[2025-06-03 19:28:42] 2025-06-03 17:01:40,158 | INFO     | will attempt to kill all subprocesses of pid=24597
[2025-06-03 19:28:42] 2025-06-03 17:01:40,270 | INFO     | process IDs to be killed: [24597] (in reverse order)
[2025-06-03 19:28:42] 2025-06-03 17:01:41,210 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:28:42] 2025-06-03 17:01:41,210 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:28:42] 2025-06-03 17:01:41,214 | INFO     | did not find any defunct processes belonging to 24597
[2025-06-03 19:28:42] 2025-06-03 17:01:41,217 | INFO     | did not find any defunct processes belonging to 24597
[2025-06-03 19:28:42] 2025-06-03 17:01:41,217 | INFO     | ready for new job
[2025-06-03 19:28:42] 2025-06-03 17:01:41,217 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:28:42] 2025-06-03 17:01:41,219 | INFO     | **************************************
[2025-06-03 19:28:42] 2025-06-03 17:01:41,219 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:28:42] 2025-06-03 17:01:41,219 | INFO     | **************************************
[2025-06-03 19:28:42] 2025-06-03 17:01:41,219 | INFO     | 
[2025-06-03 19:28:42] 2025-06-03 17:01:41,220 | INFO     | pilot is running in a VM
[2025-06-03 19:28:42] 2025-06-03 17:01:41,220 | INFO     | architecture information:
[2025-06-03 19:28:42] 2025-06-03 17:01:41,234 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:28:42] 2025-06-03 17:01:41,529 | INFO     | PID=8248 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 19:28:42] 2025-06-03 17:01:41,530 | INFO     | .. there are 9 such processes running
[2025-06-03 19:28:42] 2025-06-03 17:01:41,531 | INFO     | cat /etc/os-release:
[2025-06-03 19:28:42] NAME="CentOS Linux"
[2025-06-03 19:28:42] VERSION="7 (Core)"
[2025-06-03 19:28:42] ID="centos"
[2025-06-03 19:28:42] ID_LIKE="rhel fedora"
[2025-06-03 19:28:42] VERSION_ID="7"
[2025-06-03 19:28:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:28:42] ANSI_COLOR="0;31"
[2025-06-03 19:28:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:28:42] HOME_URL="https://www.centos.org/"
[2025-06-03 19:28:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:28:42] 
[2025-06-03 19:28:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:28:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:28:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:28:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:28:42] 
[2025-06-03 19:28:42] 2025-06-03 17:01:41,532 | INFO     | **************************************
[2025-06-03 19:28:42] 2025-06-03 17:01:42,035 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 19:28:42] 2025-06-03 17:01:42,175 | INFO     | sufficient remaining disk space (496852008960 B)
[2025-06-03 19:28:42] 2025-06-03 17:01:42,175 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:28:42] 2025-06-03 17:01:42,175 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:28:42] 2025-06-03 17:01:42,175 | INFO     | update_server=False
[2025-06-03 19:28:42] 2025-06-03 17:01:42,175 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:28:42] 2025-06-03 17:01:42,176 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 19:28:42] 2025-06-03 17:01:42,176 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:28:42] 2025-06-03 17:01:42,176 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:28:42] 2025-06-03 17:01:42,176 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:28:42] 2025-06-03 17:01:42,182 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:28:42] 2025-06-03 17:01:42,440 | INFO     | all data control threads have been joined
[2025-06-03 19:28:42] 2025-06-03 17:01:42,648 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 19:28:42] 2025-06-03 17:01:42,648 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 19:28:42] 2025-06-03 17:01:42,648 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:28:42] 2025-06-03 17:01:42,649 | INFO     | will abort loop
[2025-06-03 19:28:42] 2025-06-03 17:01:43,181 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:28:42] 2025-06-03 17:01:43,194 | INFO     | all job control threads have been joined
[2025-06-03 19:28:42] 2025-06-03 17:01:43,403 | INFO     | all payload control threads have been joined
[2025-06-03 19:28:42] 2025-06-03 17:01:43,443 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:28:42] 2025-06-03 17:01:43,447 | INFO     | [data] control thread has finished
[2025-06-03 19:28:42] 2025-06-03 17:01:43,507 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:28:42] 2025-06-03 17:01:43,619 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:28:42] 2025-06-03 17:01:43,654 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:28:42] 2025-06-03 17:01:43,681 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:28:42] 2025-06-03 17:01:44,065 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:28:42] 2025-06-03 17:01:44,188 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:28:42] 2025-06-03 17:01:44,200 | INFO     | [job] control thread has finished
[2025-06-03 19:28:42] 2025-06-03 17:01:44,217 | INFO     | [job] validate thread has finished
[2025-06-03 19:28:42] 2025-06-03 17:01:44,409 | INFO     | [payload] control thread has finished
[2025-06-03 19:28:42] 2025-06-03 17:01:44,447 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:28:42] 2025-06-03 17:01:44,578 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:28:42] 2025-06-03 17:01:44,628 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:28:42] 2025-06-03 17:01:44,687 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:28:42] 2025-06-03 17:01:45,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:28:42] 2025-06-03 17:01:49,559 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:28:42] 2025-06-03 17:01:50,668 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140464318072640)>', '<ExcThread(monitor, started 140463885514496)>']
[2025-06-03 19:28:42] 2025-06-03 17:01:51,234 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:28:42] 2025-06-03 17:01:51,234 | INFO     | [monitor] control thread has ended
[2025-06-03 19:28:42] 2025-06-03 17:01:55,694 | INFO     | all workflow threads have been joined
[2025-06-03 19:28:42] 2025-06-03 17:01:55,694 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:28:42] 2025-06-03 17:01:55,695 | INFO     | traces error code: 0
[2025-06-03 19:28:42] 2025-06-03 17:01:55,695 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:28:42] 2025-06-03 17:01:55,936 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:28:42] 2025-06-03 17:01:56,017 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:28:42] 2025-06-03 17:01:56,064 [wrapper] pilotpid: 8248
[2025-06-03 19:28:42] 2025-06-03 17:01:56,081 [wrapper] Pilot exit status: 0
[2025-06-03 19:28:42] 2025-06-03 17:01:56,102 [wrapper] pandaids: 6677401824
[2025-06-03 19:28:42] 2025-06-03 17:01:56,151 [wrapper] cleanup supervisor_pilot 20034 8249
[2025-06-03 19:28:42] 2025-06-03 17:01:56,167 [wrapper] Test setup, not cleaning
[2025-06-03 19:28:42] 2025-06-03 17:01:56,172 [wrapper] apfmon messages muted
[2025-06-03 19:28:42] 2025-06-03 17:01:56,183 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:28:42] 2025-06-03 17:01:56,191 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:28:42]  *** Error codes and diagnostics ***
[2025-06-03 19:28:42]     "exeErrorCode": 0,
[2025-06-03 19:28:42]     "exeErrorDiag": "",
[2025-06-03 19:28:42]     "pilotErrorCode": 0,
[2025-06-03 19:28:42]     "pilotErrorDiag": "",
[2025-06-03 19:28:42]  *** Listing of results directory ***
[2025-06-03 19:28:42] total 387792
[2025-06-03 19:28:42] -rw-r--r--. 1 boinc boinc    495897 Jun  2 23:10 pilot3.tar.gz
[2025-06-03 19:28:42] -rw-r--r--. 1 boinc boinc      5111 Jun  2 23:22 queuedata.json
[2025-06-03 19:28:42] -rwx------. 1 boinc boinc     37140 Jun  2 23:23 runpilot2-wrapper.sh
[2025-06-03 19:28:42] -rw-r--r--. 1 boinc boinc       100 Jun  3 15:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:28:42] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 15:15 run_atlas
[2025-06-03 19:28:42] -rw-r--r--. 1 boinc boinc       105 Jun  3 15:15 job.xml
[2025-06-03 19:28:42] -rw-r--r--. 2 boinc boinc 213639213 Jun  3 15:15 EVNT.45006593._000492.pool.root.1
[2025-06-03 19:28:42] -rw-r--r--. 1 boinc boinc      6392 Jun  3 15:15 init_data.xml
[2025-06-03 19:28:42] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:15 start_atlas.sh
[2025-06-03 19:28:42] drwxrwx--x. 2 boinc boinc        68 Jun  3 15:15 shared
[2025-06-03 19:28:42] -rw-r--r--. 2 boinc boinc    508876 Jun  3 15:15 input.tar.gz
[2025-06-03 19:28:42] -rw-r--r--. 1 boinc boinc         0 Jun  3 15:15 boinc_lockfile
[2025-06-03 19:28:42] -rw-r--r--. 1 boinc boinc      2521 Jun  3 15:15 pandaJob.out
[2025-06-03 19:28:42] -rw-------. 1 boinc boinc    982666 Jun  3 15:16 agis_schedconf.cvmfs.json
[2025-06-03 19:28:42] drwx------. 4 boinc boinc      4096 Jun  3 15:16 pilot3
[2025-06-03 19:28:42] -rw-------. 1 boinc boinc 176568572 Jun  3 18:59 HITS.45006595._012278.pool.root.1
[2025-06-03 19:28:42] -rw-r--r--. 1 boinc boinc       531 Jun  3 18:59 boinc_task_state.xml
[2025-06-03 19:28:42] -rw-------. 1 boinc boinc      1019 Jun  3 19:00 memory_monitor_summary.json
[2025-06-03 19:28:42] -rw-------. 1 boinc boinc   1603667 Jun  3 19:00 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:28:42] -rw-------. 1 boinc boinc    365019 Jun  3 19:00 log.45006595._012278.job.log.tgz.1
[2025-06-03 19:28:42] -rw-------. 1 boinc boinc      7689 Jun  3 19:01 heartbeat.json
[2025-06-03 19:28:42] -rw-------. 1 boinc boinc        95 Jun  3 19:01 pilot_heartbeat.json
[2025-06-03 19:28:42] -rw-------. 1 boinc boinc      5116 Jun  3 19:01 pilotlog.txt
[2025-06-03 19:28:42] -rw-------. 1 boinc boinc   1169329 Jun  3 19:01 log.45006595._012278.job.log.1
[2025-06-03 19:28:42] -rw-------. 1 boinc boinc       357 Jun  3 19:01 output.list
[2025-06-03 19:28:42] -rw-r--r--. 1 boinc boinc       620 Jun  3 19:01 runtime_log
[2025-06-03 19:28:42] -rw-------. 1 boinc boinc   1556480 Jun  3 19:01 result.tar.gz
[2025-06-03 19:28:42] -rw-r--r--. 1 boinc boinc      8659 Jun  3 19:01 runtime_log.err
[2025-06-03 19:28:42] -rw-------. 1 boinc boinc       656 Jun  3 19:01 JQTNDmMoRg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfmgKDmKh0bGo.diag
[2025-06-03 19:28:42] -rw-r--r--. 1 boinc boinc      8192 Jun  3 19:28 boinc_mmap_file
[2025-06-03 19:28:42] -rw-r--r--. 1 boinc boinc        28 Jun  3 19:28 wrapper_checkpoint.txt
[2025-06-03 19:28:42] -rw-r--r--. 1 boinc boinc     20609 Jun  3 19:28 stderr.txt
[2025-06-03 19:28:42] HITS file was successfully produced:
[2025-06-03 19:28:42] -rw-------. 1 boinc boinc 176568572 Jun  3 18:59 shared/HITS.pool.root.1
[2025-06-03 19:28:42]  *** Contents of shared directory: ***
[2025-06-03 19:28:42] total 383104
[2025-06-03 19:28:42] -rw-r--r--. 2 boinc boinc 213639213 Jun  3 15:15 ATLAS.root_0
[2025-06-03 19:28:42] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:15 start_atlas.sh
[2025-06-03 19:28:42] -rw-r--r--. 2 boinc boinc    508876 Jun  3 15:15 input.tar.gz
[2025-06-03 19:28:42] -rw-------. 1 boinc boinc 176568572 Jun  3 18:59 HITS.pool.root.1
[2025-06-03 19:28:42] -rw-------. 1 boinc boinc   1556480 Jun  3 19:01 result.tar.gz
19:28:44 (1427): run_atlas exited; CPU time 48473.306417
19:28:44 (1427): called boinc_finish(0)

</stderr_txt>
]]>

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