Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:30:24 (7146): wrapper (7.7.26015): starting
09:30:24 (7146): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 09:30:24] Arguments: --nthreads 8
[2025-06-03 09:30:24] Threads: 8
[2025-06-03 09:30:24] Checking for CVMFS
[2025-06-03 09:30:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:30:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:30:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:30:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:30:27] 2.11.2.0 26884 31486 88824 146731 1 60 14582240 25165824 4635 130560 0 16151493 99.831 18105872 2020 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 09:30:27] CVMFS is ok
[2025-06-03 09:30:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:30:27] Checking for apptainer binary...
[2025-06-03 09:30:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:30:27] Running /usr/bin/apptainer --version
[2025-06-03 09:30:27] apptainer version 1.3.2-1.el7
[2025-06-03 09:30:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:30:36] cg-vwn403.simple-grid.lan
[2025-06-03 09:30:36] apptainer works
[2025-06-03 09:30:36] Set ATHENA_PROC_NUMBER=8
[2025-06-03 09:30:36] Set ATHENA_CORE_NUMBER=8
[2025-06-03 09:30:36] Starting ATLAS job with PandaID=6677401537
[2025-06-03 09:30:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:02:19]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:02:19] 2025-06-03 11:34:47,274 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:02:19] 2025-06-03 11:34:47,274 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:02:19] 2025-06-03 11:34:47,274 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:02:19] 2025-06-03 11:34:47,280 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:02:19] 2025-06-03 11:34:47,280 | INFO     | sum of square deviations: 3675146117.0
[2025-06-03 14:02:19] 2025-06-03 11:34:47,282 | INFO     | sum of deviations: 50493739237.000015
[2025-06-03 14:02:19] 2025-06-03 11:34:47,282 | INFO     | mean x: 1748943427.5
[2025-06-03 14:02:19] 2025-06-03 11:34:47,282 | INFO     | mean y: 2458039.8157894737
[2025-06-03 14:02:19] 2025-06-03 11:34:47,282 | INFO     | -- intersect: -24026707211.588566
[2025-06-03 14:02:19] 2025-06-03 11:34:47,282 | INFO     | intersect: -24026707211.588566
[2025-06-03 14:02:19] 2025-06-03 11:34:47,283 | INFO     | chi2: 7.5371619921862525
[2025-06-03 14:02:19] 2025-06-03 11:34:47,283 | INFO     | sum of square deviations: 3438620752.0
[2025-06-03 14:02:19] 2025-06-03 11:34:47,285 | INFO     | sum of deviations: 64665361778.0
[2025-06-03 14:02:19] 2025-06-03 11:34:47,285 | INFO     | mean x: 1748943275.0
[2025-06-03 14:02:19] 2025-06-03 11:34:47,285 | INFO     | mean y: 2467004.34529148
[2025-06-03 14:02:19] 2025-06-03 11:34:47,285 | INFO     | -- intersect: -32887478634.84602
[2025-06-03 14:02:19] 2025-06-03 11:34:47,286 | INFO     | intersect: -32887478634.84602
[2025-06-03 14:02:19] 2025-06-03 11:34:47,286 | INFO     | chi2: 6.84009376018029
[2025-06-03 14:02:19] 2025-06-03 11:34:47,286 | INFO     | current chi2=6.84009376018029 (change=9.248417809363932 %)
[2025-06-03 14:02:19] 2025-06-03 11:34:47,286 | INFO     | right removable region: 222
[2025-06-03 14:02:19] 2025-06-03 11:34:47,287 | INFO     | sum of square deviations: 3438620752.0
[2025-06-03 14:02:19] 2025-06-03 11:34:47,288 | INFO     | sum of deviations: -30313766511.999985
[2025-06-03 14:02:19] 2025-06-03 11:34:47,289 | INFO     | mean x: 1748943580.0
[2025-06-03 14:02:19] 2025-06-03 11:34:47,289 | INFO     | mean y: 2510109.3049327354
[2025-06-03 14:02:19] 2025-06-03 11:34:47,289 | INFO     | -- intersect: 15420630091.261398
[2025-06-03 14:02:19] 2025-06-03 11:34:47,289 | INFO     | intersect: 15420630091.261398
[2025-06-03 14:02:19] 2025-06-03 11:34:47,289 | INFO     | chi2: 2.4641943878222063
[2025-06-03 14:02:19] 2025-06-03 11:34:47,289 | INFO     | current chi2=2.4641943878222063 (change=67.30607103340982 %)
[2025-06-03 14:02:19] 2025-06-03 11:34:47,290 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 14:02:19] 2025-06-03 11:34:47,292 | INFO     | sum of deviations: -68940603386.00002
[2025-06-03 14:02:19] 2025-06-03 11:34:47,292 | INFO     | mean x: 1748943732.5
[2025-06-03 14:02:19] 2025-06-03 11:34:47,292 | INFO     | mean y: 2535977.6972477064
[2025-06-03 14:02:19] 2025-06-03 11:34:47,292 | INFO     | -- intersect: 37535438538.4925
[2025-06-03 14:02:19] 2025-06-03 11:34:47,292 | INFO     | intersect: 37535438538.4925
[2025-06-03 14:02:19] 2025-06-03 11:34:47,292 | INFO     | chi2: 1.0159890264087927
[2025-06-03 14:02:19] 2025-06-03 11:34:47,293 | INFO     | current chi2=1.0159890264087927 (change=58.769931810992446 %)
[2025-06-03 14:02:19] 2025-06-03 11:34:47,293 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 14:02:19] 2025-06-03 11:34:47,295 | INFO     | sum of deviations: -67796219230.0
[2025-06-03 14:02:19] 2025-06-03 11:34:47,295 | INFO     | mean x: 1748943885.0
[2025-06-03 14:02:19] 2025-06-03 11:34:47,295 | INFO     | mean y: 2535131.896713615
[2025-06-03 14:02:19] 2025-06-03 11:34:47,295 | INFO     | -- intersect: 39573231130.121216
[2025-06-03 14:02:19] 2025-06-03 11:34:47,295 | INFO     | intersect: 39573231130.121216
[2025-06-03 14:02:19] 2025-06-03 11:34:47,295 | INFO     | chi2: 0.9982280273334737
[2025-06-03 14:02:19] 2025-06-03 11:34:47,296 | INFO     | current chi2=0.9982280273334737 (change=1.7481487116153875 %)
[2025-06-03 14:02:19] 2025-06-03 11:34:47,296 | INFO     | left removable region: 30
[2025-06-03 14:02:19] 2025-06-03 11:34:47,296 | INFO     | sum of square deviations: 2194675568.0
[2025-06-03 14:02:19] 2025-06-03 11:34:47,297 | INFO     | sum of deviations: -32951535435.5
[2025-06-03 14:02:19] 2025-06-03 11:34:47,298 | INFO     | mean x: 1748944159.5
[2025-06-03 14:02:19] 2025-06-03 11:34:47,298 | INFO     | mean y: 2531281.984375
[2025-06-03 14:02:19] 2025-06-03 11:34:47,298 | INFO     | -- intersect: 26261717963.95641
[2025-06-03 14:02:19] 2025-06-03 11:34:47,298 | INFO     | intersect: 26261717963.95641
[2025-06-03 14:02:19] 2025-06-03 11:34:47,298 | INFO     | chi2: 0.18111347072786801
[2025-06-03 14:02:19] 2025-06-03 11:34:47,298 | INFO     | -- intersect: 26261717963.95641
[2025-06-03 14:02:19] 2025-06-03 11:34:47,298 | INFO     | current memory leak: -15.01 B/s (using 192 data points, chi2=0.18)
[2025-06-03 14:02:19] 2025-06-03 11:34:47,299 | INFO     | ..............................
[2025-06-03 14:02:19] 2025-06-03 11:34:47,299 | INFO     | . Timing measurements:
[2025-06-03 14:02:19] 2025-06-03 11:34:47,300 | INFO     | . get job = 0 s
[2025-06-03 14:02:19] 2025-06-03 11:34:47,300 | INFO     | . initial setup = 11 s
[2025-06-03 14:02:19] 2025-06-03 11:34:47,300 | INFO     | . payload setup = 144 s
[2025-06-03 14:02:19] 2025-06-03 11:34:47,300 | INFO     | . stage-in = 0 s
[2025-06-03 14:02:19] 2025-06-03 11:34:47,300 | INFO     | . payload execution = 14033 s
[2025-06-03 14:02:19] 2025-06-03 11:34:47,300 | INFO     | . stage-out = 1 s
[2025-06-03 14:02:19] 2025-06-03 11:34:47,300 | INFO     | . log creation = 0 s
[2025-06-03 14:02:19] 2025-06-03 11:34:47,300 | INFO     | ..............................
[2025-06-03 14:02:19] 2025-06-03 11:34:47,842 | INFO     | 
[2025-06-03 14:02:19] 2025-06-03 11:34:47,842 | INFO     | job summary report
[2025-06-03 14:02:19] 2025-06-03 11:34:47,842 | INFO     | --------------------------------------------------
[2025-06-03 14:02:19] 2025-06-03 11:34:47,842 | INFO     | PanDA job id: 6677401537
[2025-06-03 14:02:19] 2025-06-03 11:34:47,842 | INFO     | task id: 45006595
[2025-06-03 14:02:19] 2025-06-03 11:34:47,842 | INFO     | errors: (none)
[2025-06-03 14:02:19] 2025-06-03 11:34:47,843 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:02:19] 2025-06-03 11:34:47,843 | INFO     | pilot state: finished 
[2025-06-03 14:02:19] 2025-06-03 11:34:47,843 | INFO     | transexitcode: 0
[2025-06-03 14:02:19] 2025-06-03 11:34:47,843 | INFO     | exeerrorcode: 0
[2025-06-03 14:02:19] 2025-06-03 11:34:47,843 | INFO     | exeerrordiag: 
[2025-06-03 14:02:19] 2025-06-03 11:34:47,843 | INFO     | exitcode: 0
[2025-06-03 14:02:19] 2025-06-03 11:34:47,843 | INFO     | exitmsg: OK
[2025-06-03 14:02:19] 2025-06-03 11:34:47,843 | INFO     | cpuconsumptiontime: 50334 s
[2025-06-03 14:02:19] 2025-06-03 11:34:47,843 | INFO     | nevents: 400
[2025-06-03 14:02:19] 2025-06-03 11:34:47,843 | INFO     | neventsw: 0
[2025-06-03 14:02:19] 2025-06-03 11:34:47,843 | INFO     | pid: 21654
[2025-06-03 14:02:19] 2025-06-03 11:34:47,843 | INFO     | pgrp: 21654
[2025-06-03 14:02:19] 2025-06-03 11:34:47,844 | INFO     | corecount: 8
[2025-06-03 14:02:19] 2025-06-03 11:34:47,844 | INFO     | event service: False
[2025-06-03 14:02:19] 2025-06-03 11:34:47,844 | INFO     | sizes: {0: 2404955, 1: 2405210, 12: 2405210, 23: 2405238, 34: 2405266, 44: 2405294, 55: 2405450, 66: 2405478, 77: 2405506, 87: 2405562, 90: 2405796, 98: 2406104, 1
[2025-06-03 14:02:19] 2025-06-03 11:34:47,844 | INFO     | --------------------------------------------------
[2025-06-03 14:02:19] 2025-06-03 11:34:47,844 | INFO     | 
[2025-06-03 14:02:19] 2025-06-03 11:34:47,844 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-03 14:02:19] 2025-06-03 11:34:48,217 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,218 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,218 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,218 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,218 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,219 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:02:19] 2025-06-03 11:34:48,219 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,219 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:02:19] 2025-06-03 11:34:48,219 | INFO     | job 6677401537 has completed (purged errors)
[2025-06-03 14:02:19] 2025-06-03 11:34:48,220 | INFO     | overall cleanup function is called
[2025-06-03 14:02:19] 2025-06-03 11:34:49,229 | INFO     | --- collectZombieJob: --- 10, [21654]
[2025-06-03 14:02:19] 2025-06-03 11:34:49,229 | INFO     | zombie collector waiting for pid 21654
[2025-06-03 14:02:19] 2025-06-03 11:34:49,229 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:02:19] 2025-06-03 11:34:49,229 | INFO     | collected zombie processes
[2025-06-03 14:02:19] 2025-06-03 11:34:49,229 | INFO     | will attempt to kill all subprocesses of pid=21654
[2025-06-03 14:02:19] 2025-06-03 11:34:49,333 | INFO     | process IDs to be killed: [21654] (in reverse order)
[2025-06-03 14:02:19] 2025-06-03 11:34:49,459 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:02:19] 2025-06-03 11:34:49,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:02:19] 2025-06-03 11:34:49,463 | INFO     | did not find any defunct processes belonging to 21654
[2025-06-03 14:02:19] 2025-06-03 11:34:49,465 | INFO     | did not find any defunct processes belonging to 21654
[2025-06-03 14:02:19] 2025-06-03 11:34:49,466 | INFO     | ready for new job
[2025-06-03 14:02:19] 2025-06-03 11:34:49,466 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:02:19] 2025-06-03 11:34:49,468 | INFO     | **************************************
[2025-06-03 14:02:19] 2025-06-03 11:34:49,468 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:02:19] 2025-06-03 11:34:49,468 | INFO     | **************************************
[2025-06-03 14:02:19] 2025-06-03 11:34:49,468 | INFO     | 
[2025-06-03 14:02:19] 2025-06-03 11:34:49,469 | INFO     | pilot is running in a VM
[2025-06-03 14:02:19] 2025-06-03 11:34:49,469 | INFO     | architecture information:
[2025-06-03 14:02:19] 2025-06-03 11:34:49,473 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:02:19] 2025-06-03 11:34:49,538 | INFO     | cat /etc/os-release:
[2025-06-03 14:02:19] NAME="CentOS Linux"
[2025-06-03 14:02:19] VERSION="7 (Core)"
[2025-06-03 14:02:19] ID="centos"
[2025-06-03 14:02:19] ID_LIKE="rhel fedora"
[2025-06-03 14:02:19] VERSION_ID="7"
[2025-06-03 14:02:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:02:19] ANSI_COLOR="0;31"
[2025-06-03 14:02:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:02:19] HOME_URL="https://www.centos.org/"
[2025-06-03 14:02:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:02:19] 
[2025-06-03 14:02:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:02:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:02:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:02:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:02:19] 
[2025-06-03 14:02:19] 2025-06-03 11:34:49,538 | INFO     | **************************************
[2025-06-03 14:02:19] 2025-06-03 11:34:50,042 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-03 14:02:19] 2025-06-03 11:34:50,323 | INFO     | sufficient remaining disk space (496774414336 B)
[2025-06-03 14:02:19] 2025-06-03 11:34:50,324 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:02:19] 2025-06-03 11:34:50,324 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:02:19] 2025-06-03 11:34:50,324 | INFO     | update_server=False
[2025-06-03 14:02:19] 2025-06-03 11:34:50,324 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:02:19] 2025-06-03 11:34:50,325 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 14:02:19] 2025-06-03 11:34:50,325 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:02:19] 2025-06-03 11:34:50,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:02:19] 2025-06-03 11:34:50,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:02:19] 2025-06-03 11:34:50,326 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:02:19] 2025-06-03 11:34:50,396 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 14:02:19] 2025-06-03 11:34:50,396 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 14:02:19] 2025-06-03 11:34:50,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:02:19] 2025-06-03 11:34:50,396 | INFO     | will abort loop
[2025-06-03 14:02:19] 2025-06-03 11:34:50,482 | INFO     | all data control threads have been joined
[2025-06-03 14:02:19] 2025-06-03 11:34:50,729 | INFO     | all job control threads have been joined
[2025-06-03 14:02:19] 2025-06-03 11:34:51,330 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:02:19] 2025-06-03 11:34:51,402 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:02:19] 2025-06-03 11:34:51,486 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:02:19] 2025-06-03 11:34:51,488 | INFO     | [data] control thread has finished
[2025-06-03 14:02:19] 2025-06-03 11:34:51,511 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:02:19] 2025-06-03 11:34:51,728 | INFO     | all payload control threads have been joined
[2025-06-03 14:02:19] 2025-06-03 11:34:51,734 | INFO     | [job] control thread has finished
[2025-06-03 14:02:19] 2025-06-03 11:34:51,735 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:02:19] 2025-06-03 11:34:51,815 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:02:19] 2025-06-03 11:34:52,193 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:02:19] 2025-06-03 11:34:52,274 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:02:19] 2025-06-03 11:34:52,333 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:02:19] 2025-06-03 11:34:52,449 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:02:19] 2025-06-03 11:34:52,465 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:02:19] 2025-06-03 11:34:52,665 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:02:19] 2025-06-03 11:34:52,665 | INFO     | [job] validate thread has finished
[2025-06-03 14:02:19] 2025-06-03 11:34:52,734 | INFO     | [payload] control thread has finished
[2025-06-03 14:02:19] 2025-06-03 11:34:53,472 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:02:19] 2025-06-03 11:34:56,283 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:02:19] 2025-06-03 11:34:57,552 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140352170829632)>', '<ExcThread(monitor, started 140351595599616)>']
[2025-06-03 14:02:19] 2025-06-03 11:34:58,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:02:19] 2025-06-03 11:34:58,374 | INFO     | [monitor] control thread has ended
[2025-06-03 14:02:19] 2025-06-03 11:35:02,578 | INFO     | all workflow threads have been joined
[2025-06-03 14:02:19] 2025-06-03 11:35:02,578 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:02:19] 2025-06-03 11:35:02,578 | INFO     | traces error code: 0
[2025-06-03 14:02:19] 2025-06-03 11:35:02,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:02:19] 2025-06-03 11:35:02,822 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:02:19] 2025-06-03 11:35:02,825 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:02:19] 2025-06-03 11:35:02,828 [wrapper] pilotpid: 13011
[2025-06-03 14:02:19] 2025-06-03 11:35:02,836 [wrapper] Pilot exit status: 0
[2025-06-03 14:02:19] 2025-06-03 11:35:03,049 [wrapper] pandaids: 6677401537
[2025-06-03 14:02:19] 2025-06-03 11:35:03,564 [wrapper] cleanup supervisor_pilot 14848 13012
[2025-06-03 14:02:19] 2025-06-03 11:35:03,628 [wrapper] Test setup, not cleaning
[2025-06-03 14:02:19] 2025-06-03 11:35:03,699 [wrapper] apfmon messages muted
[2025-06-03 14:02:19] 2025-06-03 11:35:03,767 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:02:19] 2025-06-03 11:35:03,837 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:02:19]  *** Error codes and diagnostics ***
[2025-06-03 14:02:19]     "exeErrorCode": 0,
[2025-06-03 14:02:19]     "exeErrorDiag": "",
[2025-06-03 14:02:19]     "pilotErrorCode": 0,
[2025-06-03 14:02:19]     "pilotErrorDiag": "",
[2025-06-03 14:02:19]  *** Listing of results directory ***
[2025-06-03 14:02:19] total 393504
[2025-06-03 14:02:19] -rw-r--r--. 1 boinc boinc    495897 Jun  2 23:10 pilot3.tar.gz
[2025-06-03 14:02:19] -rwx------. 1 boinc boinc     37140 Jun  2 23:22 runpilot2-wrapper.sh
[2025-06-03 14:02:19] -rw-r--r--. 1 boinc boinc      5111 Jun  2 23:22 queuedata.json
[2025-06-03 14:02:19] -rw-r--r--. 1 boinc boinc       100 Jun  3 09:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:02:19] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 09:30 run_atlas
[2025-06-03 14:02:19] -rw-r--r--. 1 boinc boinc       105 Jun  3 09:30 job.xml
[2025-06-03 14:02:19] -rw-r--r--. 1 boinc boinc      6392 Jun  3 09:30 init_data.xml
[2025-06-03 14:02:19] -rw-r--r--. 2 boinc boinc 215638883 Jun  3 09:30 EVNT.45006593._000488.pool.root.1
[2025-06-03 14:02:19] -rw-r--r--. 2 boinc boinc     15093 Jun  3 09:30 start_atlas.sh
[2025-06-03 14:02:19] drwxrwx--x. 2 boinc boinc        68 Jun  3 09:30 shared
[2025-06-03 14:02:19] -rw-r--r--. 2 boinc boinc    508880 Jun  3 09:30 input.tar.gz
[2025-06-03 14:02:19] -rw-r--r--. 1 boinc boinc         0 Jun  3 09:30 boinc_lockfile
[2025-06-03 14:02:19] -rw-r--r--. 1 boinc boinc      2524 Jun  3 09:30 pandaJob.out
[2025-06-03 14:02:19] -rw-------. 1 boinc boinc    985499 Jun  3 09:33 agis_schedconf.cvmfs.json
[2025-06-03 14:02:19] drwx------. 4 boinc boinc      4096 Jun  3 09:33 pilot3
[2025-06-03 14:02:19] -rw-------. 1 boinc boinc 180229318 Jun  3 13:32 HITS.45006595._012191.pool.root.1
[2025-06-03 14:02:19] -rw-r--r--. 1 boinc boinc       531 Jun  3 13:32 boinc_task_state.xml
[2025-06-03 14:02:19] -rw-------. 1 boinc boinc      1020 Jun  3 13:33 memory_monitor_summary.json
[2025-06-03 14:02:19] -rw-------. 1 boinc boinc   1603667 Jun  3 13:33 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:02:19] -rw-------. 1 boinc boinc    388773 Jun  3 13:33 log.45006595._012191.job.log.tgz.1
[2025-06-03 14:02:19] -rw-------. 1 boinc boinc        95 Jun  3 13:34 pilot_heartbeat.json
[2025-06-03 14:02:19] -rw-------. 1 boinc boinc      7696 Jun  3 13:34 heartbeat.json
[2025-06-03 14:02:19] -rw-------. 1 boinc boinc      4725 Jun  3 13:35 pilotlog.txt
[2025-06-03 14:02:19] -rw-------. 1 boinc boinc   1238044 Jun  3 13:35 log.45006595._012191.job.log.1
[2025-06-03 14:02:19] -rw-------. 1 boinc boinc       357 Jun  3 13:35 output.list
[2025-06-03 14:02:19] -rw-r--r--. 1 boinc boinc       620 Jun  3 13:35 runtime_log
[2025-06-03 14:02:19] -rw-------. 1 boinc boinc   1648640 Jun  3 13:35 result.tar.gz
[2025-06-03 14:02:19] -rw-r--r--. 1 boinc boinc      8659 Jun  3 13:35 runtime_log.err
[2025-06-03 14:02:19] -rw-------. 1 boinc boinc       657 Jun  3 13:35 iTXNDmVnRg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmueWKDm9GmGgn.diag
[2025-06-03 14:02:19] -rw-r--r--. 1 boinc boinc      8192 Jun  3 14:02 boinc_mmap_file
[2025-06-03 14:02:19] -rw-r--r--. 1 boinc boinc        28 Jun  3 14:02 wrapper_checkpoint.txt
[2025-06-03 14:02:19] -rw-r--r--. 1 boinc boinc     20526 Jun  3 14:02 stderr.txt
[2025-06-03 14:02:19] HITS file was successfully produced:
[2025-06-03 14:02:19] -rw-------. 1 boinc boinc 180229318 Jun  3 13:32 shared/HITS.pool.root.1
[2025-06-03 14:02:19]  *** Contents of shared directory: ***
[2025-06-03 14:02:19] total 388724
[2025-06-03 14:02:19] -rw-r--r--. 2 boinc boinc 215638883 Jun  3 09:30 ATLAS.root_0
[2025-06-03 14:02:19] -rw-r--r--. 2 boinc boinc     15093 Jun  3 09:30 start_atlas.sh
[2025-06-03 14:02:19] -rw-r--r--. 2 boinc boinc    508880 Jun  3 09:30 input.tar.gz
[2025-06-03 14:02:19] -rw-------. 1 boinc boinc 180229318 Jun  3 13:32 HITS.pool.root.1
[2025-06-03 14:02:19] -rw-------. 1 boinc boinc   1648640 Jun  3 13:35 result.tar.gz
14:02:21 (7146): run_atlas exited; CPU time 50532.131533
14:02:21 (7146): called boinc_finish(0)

</stderr_txt>
]]>

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