Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:12:03 (31961): wrapper (7.7.26015): starting
11:12:03 (31961): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:12:03] Arguments: --nthreads 8
[2025-06-03 11:12:03] Threads: 8
[2025-06-03 11:12:03] Checking for CVMFS
[2025-06-03 11:12:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:12:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:12:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:12:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:12:05] 2.11.2.0 16729 31684 88308 146735 3 59 14107971 25165825 4634 130560 0 16169164 99.832 18462878 2635 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 11:12:05] CVMFS is ok
[2025-06-03 11:12:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:12:05] Checking for apptainer binary...
[2025-06-03 11:12:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:12:05] Running /usr/bin/apptainer --version
[2025-06-03 11:12:05] apptainer version 1.3.2-1.el7
[2025-06-03 11:12:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:12:14] cg-vwn332.simple-grid.lan
[2025-06-03 11:12:14] apptainer works
[2025-06-03 11:12:14] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:12:14] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:12:15] Starting ATLAS job with PandaID=6677393155
[2025-06-03 11:12:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:19:17]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:19:17] 2025-06-03 13:11:33,867 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-6677393155/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:19:17] 2025-06-03 13:11:33,868 | INFO     | extracted standard info from prmon json
[2025-06-03 15:19:17] 2025-06-03 13:11:33,868 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:19:17] 2025-06-03 13:11:33,868 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:19:17] 2025-06-03 13:11:33,868 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:19:17] 2025-06-03 13:11:33,869 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:19:17] 2025-06-03 13:11:33,874 | INFO     | fitting pss+swap vs Time
[2025-06-03 15:19:17] 2025-06-03 13:11:33,874 | INFO     | sum of square deviations: 3392567795.5
[2025-06-03 15:19:17] 2025-06-03 13:11:33,876 | INFO     | sum of deviations: 94513805100.99998
[2025-06-03 15:19:17] 2025-06-03 13:11:33,877 | INFO     | mean x: 1748949402.5
[2025-06-03 15:19:17] 2025-06-03 13:11:33,877 | INFO     | mean y: 2409863.6306306305
[2025-06-03 15:19:17] 2025-06-03 13:11:33,877 | INFO     | -- intersect: -48721705002.59367
[2025-06-03 15:19:17] 2025-06-03 13:11:33,877 | INFO     | intersect: -48721705002.59367
[2025-06-03 15:19:17] 2025-06-03 13:11:33,877 | INFO     | chi2: 7.084808711919395
[2025-06-03 15:19:17] 2025-06-03 13:11:33,878 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 15:19:17] 2025-06-03 13:11:33,880 | INFO     | sum of deviations: 106738574150.99998
[2025-06-03 15:19:17] 2025-06-03 13:11:33,880 | INFO     | mean x: 1748949250.0
[2025-06-03 15:19:17] 2025-06-03 13:11:33,880 | INFO     | mean y: 2418000.2534562214
[2025-06-03 15:19:17] 2025-06-03 13:11:33,880 | INFO     | -- intersect: -58915881267.863335
[2025-06-03 15:19:17] 2025-06-03 13:11:33,880 | INFO     | intersect: -58915881267.863335
[2025-06-03 15:19:17] 2025-06-03 13:11:33,881 | INFO     | chi2: 6.375451664820748
[2025-06-03 15:19:17] 2025-06-03 13:11:33,881 | INFO     | current chi2=6.375451664820748 (change=10.012366966312497 %)
[2025-06-03 15:19:17] 2025-06-03 13:11:33,881 | INFO     | right removable region: 216
[2025-06-03 15:19:17] 2025-06-03 13:11:33,881 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 15:19:17] 2025-06-03 13:11:33,895 | INFO     | sum of deviations: 18583986354.0
[2025-06-03 15:19:17] 2025-06-03 13:11:33,896 | INFO     | mean x: 1748949555.0
[2025-06-03 15:19:17] 2025-06-03 13:11:33,896 | INFO     | mean y: 2461487.7880184334
[2025-06-03 15:19:17] 2025-06-03 13:11:33,896 | INFO     | -- intersect: -10255658121.315048
[2025-06-03 15:19:17] 2025-06-03 13:11:33,896 | INFO     | intersect: -10255658121.315048
[2025-06-03 15:19:17] 2025-06-03 13:11:33,897 | INFO     | chi2: 2.2395807285884537
[2025-06-03 15:19:17] 2025-06-03 13:11:33,897 | INFO     | current chi2=2.2395807285884537 (change=68.38897393488394 %)
[2025-06-03 15:19:17] 2025-06-03 13:11:33,897 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 15:19:17] 2025-06-03 13:11:33,899 | INFO     | sum of deviations: -18766751229.5
[2025-06-03 15:19:17] 2025-06-03 13:11:33,899 | INFO     | mean x: 1748949707.5
[2025-06-03 15:19:17] 2025-06-03 13:11:33,899 | INFO     | mean y: 2487926.429245283
[2025-06-03 15:19:17] 2025-06-03 13:11:33,899 | INFO     | -- intersect: 11111874382.274958
[2025-06-03 15:19:17] 2025-06-03 13:11:33,900 | INFO     | intersect: 11111874382.274958
[2025-06-03 15:19:17] 2025-06-03 13:11:33,900 | INFO     | chi2: 0.8589022805707665
[2025-06-03 15:19:17] 2025-06-03 13:11:33,900 | INFO     | current chi2=0.8589022805707665 (change=61.648969844810686 %)
[2025-06-03 15:19:17] 2025-06-03 13:11:33,901 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 15:19:17] 2025-06-03 13:11:33,902 | INFO     | sum of deviations: -16314387902.000002
[2025-06-03 15:19:17] 2025-06-03 13:11:33,902 | INFO     | mean x: 1748949860.0
[2025-06-03 15:19:17] 2025-06-03 13:11:33,903 | INFO     | mean y: 2486041.657004831
[2025-06-03 15:19:17] 2025-06-03 13:11:33,903 | INFO     | -- intersect: 10377025299.926132
[2025-06-03 15:19:17] 2025-06-03 13:11:33,903 | INFO     | intersect: 10377025299.926132
[2025-06-03 15:19:17] 2025-06-03 13:11:33,903 | INFO     | chi2: 0.8317973414928925
[2025-06-03 15:19:17] 2025-06-03 13:11:33,903 | INFO     | current chi2=0.8317973414928925 (change=3.1557651773682425 %)
[2025-06-03 15:19:17] 2025-06-03 13:11:33,904 | INFO     | left removable region: 30
[2025-06-03 15:19:17] 2025-06-03 13:11:33,904 | INFO     | sum of square deviations: 1995283922.5
[2025-06-03 15:19:17] 2025-06-03 13:11:33,905 | INFO     | sum of deviations: 1166017714.5000002
[2025-06-03 15:19:17] 2025-06-03 13:11:33,906 | INFO     | mean x: 1748950134.5
[2025-06-03 15:19:17] 2025-06-03 13:11:33,906 | INFO     | mean y: 2493739.6612903224
[2025-06-03 15:19:17] 2025-06-03 13:11:33,906 | INFO     | -- intersect: -1019569744.9424444
[2025-06-03 15:19:17] 2025-06-03 13:11:33,906 | INFO     | intersect: -1019569744.9424444
[2025-06-03 15:19:17] 2025-06-03 13:11:33,906 | INFO     | chi2: 0.0002790107746858734
[2025-06-03 15:19:17] 2025-06-03 13:11:33,907 | INFO     | -- intersect: -1019569744.9424444
[2025-06-03 15:19:17] 2025-06-03 13:11:33,907 | INFO     | current memory leak: 0.58 B/s (using 186 data points, chi2=0.00)
[2025-06-03 15:19:17] 2025-06-03 13:11:33,908 | INFO     | ..............................
[2025-06-03 15:19:17] 2025-06-03 13:11:33,908 | INFO     | . Timing measurements:
[2025-06-03 15:19:17] 2025-06-03 13:11:33,908 | INFO     | . get job = 0 s
[2025-06-03 15:19:17] 2025-06-03 13:11:33,908 | INFO     | . initial setup = 5 s
[2025-06-03 15:19:17] 2025-06-03 13:11:33,908 | INFO     | . payload setup = 174 s
[2025-06-03 15:19:17] 2025-06-03 13:11:33,908 | INFO     | . stage-in = 0 s
[2025-06-03 15:19:17] 2025-06-03 13:11:33,908 | INFO     | . payload execution = 13677 s
[2025-06-03 15:19:17] 2025-06-03 13:11:33,908 | INFO     | . stage-out = 3 s
[2025-06-03 15:19:17] 2025-06-03 13:11:33,908 | INFO     | . log creation = 1 s
[2025-06-03 15:19:17] 2025-06-03 13:11:33,908 | INFO     | ..............................
[2025-06-03 15:19:17] 2025-06-03 13:11:34,064 | INFO     | 
[2025-06-03 15:19:17] 2025-06-03 13:11:34,064 | INFO     | job summary report
[2025-06-03 15:19:17] 2025-06-03 13:11:34,064 | INFO     | --------------------------------------------------
[2025-06-03 15:19:17] 2025-06-03 13:11:34,064 | INFO     | PanDA job id: 6677393155
[2025-06-03 15:19:17] 2025-06-03 13:11:34,065 | INFO     | task id: 45006595
[2025-06-03 15:19:17] 2025-06-03 13:11:34,065 | INFO     | errors: (none)
[2025-06-03 15:19:17] 2025-06-03 13:11:34,065 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:19:17] 2025-06-03 13:11:34,065 | INFO     | pilot state: finished 
[2025-06-03 15:19:17] 2025-06-03 13:11:34,065 | INFO     | transexitcode: 0
[2025-06-03 15:19:17] 2025-06-03 13:11:34,065 | INFO     | exeerrorcode: 0
[2025-06-03 15:19:17] 2025-06-03 13:11:34,065 | INFO     | exeerrordiag: 
[2025-06-03 15:19:17] 2025-06-03 13:11:34,065 | INFO     | exitcode: 0
[2025-06-03 15:19:17] 2025-06-03 13:11:34,065 | INFO     | exitmsg: OK
[2025-06-03 15:19:17] 2025-06-03 13:11:34,065 | INFO     | cpuconsumptiontime: 48971 s
[2025-06-03 15:19:17] 2025-06-03 13:11:34,066 | INFO     | nevents: 400
[2025-06-03 15:19:17] 2025-06-03 13:11:34,066 | INFO     | neventsw: 0
[2025-06-03 15:19:17] 2025-06-03 13:11:34,066 | INFO     | pid: 10621
[2025-06-03 15:19:17] 2025-06-03 13:11:34,066 | INFO     | pgrp: 10621
[2025-06-03 15:19:17] 2025-06-03 13:11:34,066 | INFO     | corecount: 8
[2025-06-03 15:19:17] 2025-06-03 13:11:34,066 | INFO     | event service: False
[2025-06-03 15:19:17] 2025-06-03 13:11:34,066 | INFO     | sizes: {0: 2404349, 1: 2405035, 2: 2405234, 13: 2405234, 24: 2405290, 34: 2405318, 45: 2405474, 56: 2405502, 66: 2405530, 77: 2405558, 88: 2405614, 93: 2406128, 99
[2025-06-03 15:19:17] 2025-06-03 13:11:34,066 | INFO     | --------------------------------------------------
[2025-06-03 15:19:17] 2025-06-03 13:11:34,066 | INFO     | 
[2025-06-03 15:19:17] 2025-06-03 13:11:34,067 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2025-06-03 15:19:17] 2025-06-03 13:11:34,357 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,357 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,357 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,358 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,358 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,358 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,358 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,358 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,358 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,358 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,358 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,359 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,359 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,359 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,359 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,359 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:19:17] 2025-06-03 13:11:34,359 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,360 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:19:17] 2025-06-03 13:11:34,360 | INFO     | job 6677393155 has completed (purged errors)
[2025-06-03 15:19:17] 2025-06-03 13:11:34,360 | INFO     | overall cleanup function is called
[2025-06-03 15:19:17] 2025-06-03 13:11:35,371 | INFO     | --- collectZombieJob: --- 10, [10621]
[2025-06-03 15:19:17] 2025-06-03 13:11:35,371 | INFO     | zombie collector waiting for pid 10621
[2025-06-03 15:19:17] 2025-06-03 13:11:35,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:19:17] 2025-06-03 13:11:35,372 | INFO     | collected zombie processes
[2025-06-03 15:19:17] 2025-06-03 13:11:35,372 | INFO     | will attempt to kill all subprocesses of pid=10621
[2025-06-03 15:19:17] 2025-06-03 13:11:35,531 | INFO     | process IDs to be killed: [10621] (in reverse order)
[2025-06-03 15:19:17] 2025-06-03 13:11:36,369 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:19:17] 2025-06-03 13:11:36,369 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:19:17] 2025-06-03 13:11:36,373 | INFO     | did not find any defunct processes belonging to 10621
[2025-06-03 15:19:17] 2025-06-03 13:11:36,382 | INFO     | did not find any defunct processes belonging to 10621
[2025-06-03 15:19:17] 2025-06-03 13:11:36,383 | INFO     | ready for new job
[2025-06-03 15:19:17] 2025-06-03 13:11:36,383 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:19:17] 2025-06-03 13:11:36,385 | INFO     | **************************************
[2025-06-03 15:19:17] 2025-06-03 13:11:36,385 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 15:19:17] 2025-06-03 13:11:36,385 | INFO     | **************************************
[2025-06-03 15:19:17] 2025-06-03 13:11:36,385 | INFO     | 
[2025-06-03 15:19:17] 2025-06-03 13:11:36,386 | INFO     | pilot is running in a VM
[2025-06-03 15:19:17] 2025-06-03 13:11:36,386 | INFO     | architecture information:
[2025-06-03 15:19:17] 2025-06-03 13:11:36,398 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:19:17] 2025-06-03 13:11:36,670 | INFO     | cat /etc/os-release:
[2025-06-03 15:19:17] NAME="CentOS Linux"
[2025-06-03 15:19:17] VERSION="7 (Core)"
[2025-06-03 15:19:17] ID="centos"
[2025-06-03 15:19:17] ID_LIKE="rhel fedora"
[2025-06-03 15:19:17] VERSION_ID="7"
[2025-06-03 15:19:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:19:17] ANSI_COLOR="0;31"
[2025-06-03 15:19:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:19:17] HOME_URL="https://www.centos.org/"
[2025-06-03 15:19:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:19:17] 
[2025-06-03 15:19:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:19:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:19:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:19:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:19:17] 
[2025-06-03 15:19:17] 2025-06-03 13:11:36,671 | INFO     | **************************************
[2025-06-03 15:19:17] 2025-06-03 13:11:37,174 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2025-06-03 15:19:17] 2025-06-03 13:11:37,334 | INFO     | sufficient remaining disk space (496780705792 B)
[2025-06-03 15:19:17] 2025-06-03 13:11:37,334 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:19:17] 2025-06-03 13:11:37,334 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:19:17] 2025-06-03 13:11:37,334 | INFO     | update_server=False
[2025-06-03 15:19:17] 2025-06-03 13:11:37,334 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:19:17] 2025-06-03 13:11:37,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:19:17] 2025-06-03 13:11:37,339 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:19:17] 2025-06-03 13:11:37,339 | INFO     | aborting loop
[2025-06-03 15:19:17] 2025-06-03 13:11:37,576 | INFO     | all data control threads have been joined
[2025-06-03 15:19:17] 2025-06-03 13:11:37,821 | INFO     | all payload control threads have been joined
[2025-06-03 15:19:17] 2025-06-03 13:11:38,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:19:17] 2025-06-03 13:11:38,179 | INFO     | all job control threads have been joined
[2025-06-03 15:19:17] 2025-06-03 13:11:38,309 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:19:17] 2025-06-03 13:11:38,309 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:19:17] 2025-06-03 13:11:38,310 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:19:17] 2025-06-03 13:11:38,340 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:19:17] 2025-06-03 13:11:38,345 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:19:17] 2025-06-03 13:11:38,383 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:19:17] 2025-06-03 13:11:38,582 | INFO     | [data] control thread has finished
[2025-06-03 15:19:17] 2025-06-03 13:11:38,827 | INFO     | [payload] control thread has finished
[2025-06-03 15:19:17] 2025-06-03 13:11:38,989 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:19:17] 2025-06-03 13:11:39,083 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:19:17] 2025-06-03 13:11:39,151 | INFO     | [job] validate thread has finished
[2025-06-03 15:19:17] 2025-06-03 13:11:39,185 | INFO     | [job] control thread has finished
[2025-06-03 15:19:17] 2025-06-03 13:11:39,343 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:19:17] 2025-06-03 13:11:39,451 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:19:17] 2025-06-03 13:11:39,460 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:19:17] 2025-06-03 13:11:39,603 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:19:17] 2025-06-03 13:11:39,827 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:19:17] 2025-06-03 13:11:39,929 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:19:17] 2025-06-03 13:11:40,089 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:19:17] 2025-06-03 13:11:42,081 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:19:17] 2025-06-03 13:11:43,498 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139950966040384)>', '<ExcThread(monitor, started 139950670460672)>']
[2025-06-03 15:19:17] 2025-06-03 13:11:44,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:19:17] 2025-06-03 13:11:44,344 | INFO     | [monitor] control thread has ended
[2025-06-03 15:19:17] 2025-06-03 13:11:48,524 | INFO     | all workflow threads have been joined
[2025-06-03 15:19:17] 2025-06-03 13:11:48,524 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:19:17] 2025-06-03 13:11:48,524 | INFO     | traces error code: 0
[2025-06-03 15:19:17] 2025-06-03 13:11:48,525 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:19:17] 2025-06-03 13:11:48,755 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:19:17] 2025-06-03 13:11:48,841 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:19:17] 2025-06-03 13:11:48,968 [wrapper] pilotpid: 4043
[2025-06-03 15:19:17] 2025-06-03 13:11:49,091 [wrapper] Pilot exit status: 0
[2025-06-03 15:19:17] 2025-06-03 13:11:49,408 [wrapper] pandaids: 6677393155
[2025-06-03 15:19:17] 2025-06-03 13:11:49,935 [wrapper] cleanup supervisor_pilot 28434 4044
[2025-06-03 15:19:17] 2025-06-03 13:11:49,987 [wrapper] Test setup, not cleaning
[2025-06-03 15:19:17] 2025-06-03 13:11:50,053 [wrapper] apfmon messages muted
[2025-06-03 15:19:17] 2025-06-03 13:11:50,152 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:19:17] 2025-06-03 13:11:50,198 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:19:17]  *** Error codes and diagnostics ***
[2025-06-03 15:19:17]     "exeErrorCode": 0,
[2025-06-03 15:19:17]     "exeErrorDiag": "",
[2025-06-03 15:19:17]     "pilotErrorCode": 0,
[2025-06-03 15:19:17]     "pilotErrorDiag": "",
[2025-06-03 15:19:17]  *** Listing of results directory ***
[2025-06-03 15:19:17] total 390572
[2025-06-03 15:19:17] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:47 pilot3.tar.gz
[2025-06-03 15:19:17] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:53 queuedata.json
[2025-06-03 15:19:17] -rwx------. 1 boinc boinc     37140 Jun  2 20:54 runpilot2-wrapper.sh
[2025-06-03 15:19:17] -rw-r--r--. 1 boinc boinc       100 Jun  3 11:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:19:17] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 11:12 run_atlas
[2025-06-03 15:19:17] -rw-r--r--. 1 boinc boinc       105 Jun  3 11:12 job.xml
[2025-06-03 15:19:17] -rw-r--r--. 1 boinc boinc      6391 Jun  3 11:12 init_data.xml
[2025-06-03 15:19:17] -rw-r--r--. 2 boinc boinc 213107579 Jun  3 11:12 EVNT.45006593._000334.pool.root.1
[2025-06-03 15:19:17] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:12 start_atlas.sh
[2025-06-03 15:19:17] drwxrwx--x. 2 boinc boinc        68 Jun  3 11:12 shared
[2025-06-03 15:19:17] -rw-r--r--. 2 boinc boinc    508877 Jun  3 11:12 input.tar.gz
[2025-06-03 15:19:17] -rw-r--r--. 1 boinc boinc         0 Jun  3 11:12 boinc_lockfile
[2025-06-03 15:19:17] -rw-r--r--. 1 boinc boinc      2521 Jun  3 11:12 pandaJob.out
[2025-06-03 15:19:17] -rw-------. 1 boinc boinc    985498 Jun  3 11:15 agis_schedconf.cvmfs.json
[2025-06-03 15:19:17] drwx------. 4 boinc boinc      4096 Jun  3 11:15 pilot3
[2025-06-03 15:19:17] -rw-------. 1 boinc boinc 179796009 Jun  3 15:08 HITS.45006595._008344.pool.root.1
[2025-06-03 15:19:17] -rw-r--r--. 1 boinc boinc       531 Jun  3 15:08 boinc_task_state.xml
[2025-06-03 15:19:17] -rw-------. 1 boinc boinc      1019 Jun  3 15:09 memory_monitor_summary.json
[2025-06-03 15:19:17] -rw-------. 1 boinc boinc   1603667 Jun  3 15:09 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:19:17] -rw-------. 1 boinc boinc    390323 Jun  3 15:10 log.45006595._008344.job.log.tgz.1
[2025-06-03 15:19:17] -rw-------. 1 boinc boinc        95 Jun  3 15:11 pilot_heartbeat.json
[2025-06-03 15:19:17] -rw-------. 1 boinc boinc      7690 Jun  3 15:11 heartbeat.json
[2025-06-03 15:19:17] -rw-------. 1 boinc boinc      4417 Jun  3 15:11 pilotlog.txt
[2025-06-03 15:19:17] -rw-------. 1 boinc boinc   1214962 Jun  3 15:11 log.45006595._008344.job.log.1
[2025-06-03 15:19:17] -rw-------. 1 boinc boinc       357 Jun  3 15:11 output.list
[2025-06-03 15:19:17] -rw-r--r--. 1 boinc boinc       620 Jun  3 15:11 runtime_log
[2025-06-03 15:19:17] -rw-------. 1 boinc boinc   1628160 Jun  3 15:11 result.tar.gz
[2025-06-03 15:19:17] -rw-r--r--. 1 boinc boinc      8673 Jun  3 15:11 runtime_log.err
[2025-06-03 15:19:17] -rw-------. 1 boinc boinc       656 Jun  3 15:11 702MDmsTPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmR8fKDmt39oFm.diag
[2025-06-03 15:19:17] -rw-r--r--. 1 boinc boinc      8192 Jun  3 15:19 boinc_mmap_file
[2025-06-03 15:19:17] -rw-r--r--. 1 boinc boinc        28 Jun  3 15:19 wrapper_checkpoint.txt
[2025-06-03 15:19:17] -rw-r--r--. 1 boinc boinc     20545 Jun  3 15:19 stderr.txt
[2025-06-03 15:19:17] HITS file was successfully produced:
[2025-06-03 15:19:17] -rw-------. 1 boinc boinc 179796009 Jun  3 15:08 shared/HITS.pool.root.1
[2025-06-03 15:19:17]  *** Contents of shared directory: ***
[2025-06-03 15:19:17] total 385808
[2025-06-03 15:19:17] -rw-r--r--. 2 boinc boinc 213107579 Jun  3 11:12 ATLAS.root_0
[2025-06-03 15:19:17] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:12 start_atlas.sh
[2025-06-03 15:19:17] -rw-r--r--. 2 boinc boinc    508877 Jun  3 11:12 input.tar.gz
[2025-06-03 15:19:17] -rw-------. 1 boinc boinc 179796009 Jun  3 15:08 HITS.pool.root.1
[2025-06-03 15:19:17] -rw-------. 1 boinc boinc   1628160 Jun  3 15:11 result.tar.gz
15:19:19 (31961): run_atlas exited; CPU time 49161.150979
15:19:19 (31961): called boinc_finish(0)

</stderr_txt>
]]>

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