Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:13:26 (7463): wrapper (7.7.26015): starting
10:13:26 (7463): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 10:13:26] Arguments: --nthreads 8
[2025-06-03 10:13:26] Threads: 8
[2025-06-03 10:13:26] Checking for CVMFS
[2025-06-03 10:13:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:13:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:13:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:13:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:13:28] 2.11.2.0 18967 31609 97312 146734 3 210 19922058 25165825 4634 130560 0 15881086 99.823 17377945 2442 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 10:13:28] CVMFS is ok
[2025-06-03 10:13:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:13:28] Checking for apptainer binary...
[2025-06-03 10:13:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:13:28] Running /usr/bin/apptainer --version
[2025-06-03 10:13:28] apptainer version 1.3.2-1.el7
[2025-06-03 10:13:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:44:04] cg-vwn474.simple-grid.lan
[2025-06-03 10:44:04] apptainer works
[2025-06-03 10:44:04] Set ATHENA_PROC_NUMBER=8
[2025-06-03 10:44:04] Set ATHENA_CORE_NUMBER=8
[2025-06-03 10:44:04] Starting ATLAS job with PandaID=6677394165
[2025-06-03 10:44:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:50:16]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:50:16] 2025-06-03 12:24:58,379 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6677394165/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:50:16] 2025-06-03 12:24:58,380 | INFO     | extracted standard info from prmon json
[2025-06-03 14:50:16] 2025-06-03 12:24:58,380 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:50:16] 2025-06-03 12:24:58,380 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:50:16] 2025-06-03 12:24:58,380 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:50:16] 2025-06-03 12:24:58,380 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:50:16] 2025-06-03 12:24:58,385 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:50:16] 2025-06-03 12:24:58,385 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 14:50:16] 2025-06-03 12:24:58,387 | INFO     | sum of deviations: 50112265489.000015
[2025-06-03 14:50:16] 2025-06-03 12:24:58,387 | INFO     | mean x: 1748947165.5
[2025-06-03 14:50:16] 2025-06-03 12:24:58,387 | INFO     | mean y: 2443505.754901961
[2025-06-03 14:50:16] 2025-06-03 12:24:58,387 | INFO     | -- intersect: -33291269875.220848
[2025-06-03 14:50:16] 2025-06-03 12:24:58,387 | INFO     | intersect: -33291269875.220848
[2025-06-03 14:50:16] 2025-06-03 12:24:58,387 | INFO     | chi2: 7.3517149803517565
[2025-06-03 14:50:16] 2025-06-03 12:24:58,388 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 14:50:16] 2025-06-03 12:24:58,389 | INFO     | sum of deviations: 62431856660.0
[2025-06-03 14:50:16] 2025-06-03 12:24:58,389 | INFO     | mean x: 1748947013.0
[2025-06-03 14:50:16] 2025-06-03 12:24:58,389 | INFO     | mean y: 2453238.216080402
[2025-06-03 14:50:16] 2025-06-03 12:24:58,389 | INFO     | -- intersect: -44681976140.99418
[2025-06-03 14:50:16] 2025-06-03 12:24:58,390 | INFO     | intersect: -44681976140.99418
[2025-06-03 14:50:16] 2025-06-03 12:24:58,390 | INFO     | chi2: 6.660015818639941
[2025-06-03 14:50:16] 2025-06-03 12:24:58,390 | INFO     | current chi2=6.660015818639941 (change=9.408677615501352 %)
[2025-06-03 14:50:16] 2025-06-03 12:24:58,390 | INFO     | right removable region: 198
[2025-06-03 14:50:16] 2025-06-03 12:24:58,390 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 14:50:16] 2025-06-03 12:24:58,392 | INFO     | sum of deviations: -20632683249.0
[2025-06-03 14:50:16] 2025-06-03 12:24:58,392 | INFO     | mean x: 1748947318.0
[2025-06-03 14:50:16] 2025-06-03 12:24:58,392 | INFO     | mean y: 2500577.8693467337
[2025-06-03 14:50:16] 2025-06-03 12:24:58,392 | INFO     | -- intersect: 14769958853.948412
[2025-06-03 14:50:16] 2025-06-03 12:24:58,392 | INFO     | intersect: 14769958853.948412
[2025-06-03 14:50:16] 2025-06-03 12:24:58,392 | INFO     | chi2: 2.382913215520409
[2025-06-03 14:50:16] 2025-06-03 12:24:58,393 | INFO     | current chi2=2.382913215520409 (change=67.58697498625833 %)
[2025-06-03 14:50:16] 2025-06-03 12:24:58,393 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 14:50:16] 2025-06-03 12:24:58,394 | INFO     | sum of deviations: -54094428388.0
[2025-06-03 14:50:16] 2025-06-03 12:24:58,394 | INFO     | mean x: 1748947470.5
[2025-06-03 14:50:16] 2025-06-03 12:24:58,394 | INFO     | mean y: 2528773.762886598
[2025-06-03 14:50:16] 2025-06-03 12:24:58,394 | INFO     | -- intersect: 41791071591.39995
[2025-06-03 14:50:16] 2025-06-03 12:24:58,394 | INFO     | intersect: 41791071591.39995
[2025-06-03 14:50:16] 2025-06-03 12:24:58,395 | INFO     | chi2: 1.0063374494351869
[2025-06-03 14:50:16] 2025-06-03 12:24:58,395 | INFO     | current chi2=1.0063374494351869 (change=57.768606809484204 %)
[2025-06-03 14:50:16] 2025-06-03 12:24:58,395 | INFO     | sum of square deviations: 2093397390.0
[2025-06-03 14:50:16] 2025-06-03 12:24:58,396 | INFO     | sum of deviations: -54446564429.99999
[2025-06-03 14:50:16] 2025-06-03 12:24:58,397 | INFO     | mean x: 1748947623.0
[2025-06-03 14:50:16] 2025-06-03 12:24:58,397 | INFO     | mean y: 2529047.3333333335
[2025-06-03 14:50:16] 2025-06-03 12:24:58,397 | INFO     | -- intersect: 45490399575.520454
[2025-06-03 14:50:16] 2025-06-03 12:24:58,397 | INFO     | intersect: 45490399575.520454
[2025-06-03 14:50:16] 2025-06-03 12:24:58,397 | INFO     | chi2: 0.9837769643674024
[2025-06-03 14:50:16] 2025-06-03 12:24:58,397 | INFO     | current chi2=0.9837769643674024 (change=2.2418409530964722 %)
[2025-06-03 14:50:16] 2025-06-03 12:24:58,397 | INFO     | left removable region: 30
[2025-06-03 14:50:16] 2025-06-03 12:24:58,398 | INFO     | sum of square deviations: 1470248962.0
[2025-06-03 14:50:16] 2025-06-03 12:24:58,399 | INFO     | sum of deviations: -23038086428.000004
[2025-06-03 14:50:16] 2025-06-03 12:24:58,399 | INFO     | mean x: 1748947897.5
[2025-06-03 14:50:16] 2025-06-03 12:24:58,399 | INFO     | mean y: 2523664.273809524
[2025-06-03 14:50:16] 2025-06-03 12:24:58,399 | INFO     | -- intersect: 27407686913.539814
[2025-06-03 14:50:16] 2025-06-03 12:24:58,399 | INFO     | intersect: 27407686913.539814
[2025-06-03 14:50:16] 2025-06-03 12:24:58,399 | INFO     | chi2: 0.15828849602867773
[2025-06-03 14:50:16] 2025-06-03 12:24:58,399 | INFO     | -- intersect: 27407686913.539814
[2025-06-03 14:50:16] 2025-06-03 12:24:58,399 | INFO     | current memory leak: -15.67 B/s (using 168 data points, chi2=0.16)
[2025-06-03 14:50:16] 2025-06-03 12:24:58,400 | INFO     | ..............................
[2025-06-03 14:50:16] 2025-06-03 12:24:58,400 | INFO     | . Timing measurements:
[2025-06-03 14:50:16] 2025-06-03 12:24:58,400 | INFO     | . get job = 0 s
[2025-06-03 14:50:16] 2025-06-03 12:24:58,400 | INFO     | . initial setup = 4 s
[2025-06-03 14:50:16] 2025-06-03 12:24:58,401 | INFO     | . payload setup = 165 s
[2025-06-03 14:50:16] 2025-06-03 12:24:58,401 | INFO     | . stage-in = 0 s
[2025-06-03 14:50:16] 2025-06-03 12:24:58,401 | INFO     | . payload execution = 12584 s
[2025-06-03 14:50:16] 2025-06-03 12:24:58,401 | INFO     | . stage-out = 2 s
[2025-06-03 14:50:16] 2025-06-03 12:24:58,401 | INFO     | . log creation = 0 s
[2025-06-03 14:50:16] 2025-06-03 12:24:58,401 | INFO     | ..............................
[2025-06-03 14:50:16] 2025-06-03 12:24:58,524 | INFO     | 
[2025-06-03 14:50:16] 2025-06-03 12:24:58,524 | INFO     | job summary report
[2025-06-03 14:50:16] 2025-06-03 12:24:58,524 | INFO     | --------------------------------------------------
[2025-06-03 14:50:16] 2025-06-03 12:24:58,524 | INFO     | PanDA job id: 6677394165
[2025-06-03 14:50:16] 2025-06-03 12:24:58,524 | INFO     | task id: 45006595
[2025-06-03 14:50:16] 2025-06-03 12:24:58,524 | INFO     | errors: (none)
[2025-06-03 14:50:16] 2025-06-03 12:24:58,524 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:50:16] 2025-06-03 12:24:58,525 | INFO     | pilot state: finished 
[2025-06-03 14:50:16] 2025-06-03 12:24:58,525 | INFO     | transexitcode: 0
[2025-06-03 14:50:16] 2025-06-03 12:24:58,525 | INFO     | exeerrorcode: 0
[2025-06-03 14:50:16] 2025-06-03 12:24:58,525 | INFO     | exeerrordiag: 
[2025-06-03 14:50:16] 2025-06-03 12:24:58,525 | INFO     | exitcode: 0
[2025-06-03 14:50:16] 2025-06-03 12:24:58,525 | INFO     | exitmsg: OK
[2025-06-03 14:50:16] 2025-06-03 12:24:58,525 | INFO     | cpuconsumptiontime: 45864 s
[2025-06-03 14:50:16] 2025-06-03 12:24:58,525 | INFO     | nevents: 400
[2025-06-03 14:50:16] 2025-06-03 12:24:58,525 | INFO     | neventsw: 0
[2025-06-03 14:50:16] 2025-06-03 12:24:58,525 | INFO     | pid: 3123
[2025-06-03 14:50:16] 2025-06-03 12:24:58,525 | INFO     | pgrp: 3123
[2025-06-03 14:50:16] 2025-06-03 12:24:58,525 | INFO     | corecount: 8
[2025-06-03 14:50:16] 2025-06-03 12:24:58,525 | INFO     | event service: False
[2025-06-03 14:50:16] 2025-06-03 12:24:58,526 | INFO     | sizes: {0: 2404349, 1: 2405034, 2: 2405233, 13: 2405233, 23: 2405289, 34: 2405317, 45: 2405473, 55: 2405501, 66: 2405529, 77: 2405557, 88: 2405613, 95: 2406127, 98
[2025-06-03 14:50:16] 2025-06-03 12:24:58,526 | INFO     | --------------------------------------------------
[2025-06-03 14:50:16] 2025-06-03 12:24:58,526 | INFO     | 
[2025-06-03 14:50:16] 2025-06-03 12:24:58,526 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 14:50:16] 2025-06-03 12:24:59,117 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,117 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,117 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,117 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,117 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,117 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,118 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,118 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,118 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,118 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,118 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,118 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,118 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,118 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,118 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,118 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,118 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,119 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:50:16] 2025-06-03 12:24:59,119 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,119 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:50:16] 2025-06-03 12:24:59,119 | INFO     | job 6677394165 has completed (purged errors)
[2025-06-03 14:50:16] 2025-06-03 12:24:59,119 | INFO     | overall cleanup function is called
[2025-06-03 14:50:16] 2025-06-03 12:25:00,128 | INFO     | --- collectZombieJob: --- 10, [3123]
[2025-06-03 14:50:16] 2025-06-03 12:25:00,128 | INFO     | zombie collector waiting for pid 3123
[2025-06-03 14:50:16] 2025-06-03 12:25:00,128 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:50:16] 2025-06-03 12:25:00,129 | INFO     | collected zombie processes
[2025-06-03 14:50:16] 2025-06-03 12:25:00,129 | INFO     | will attempt to kill all subprocesses of pid=3123
[2025-06-03 14:50:16] 2025-06-03 12:25:00,227 | INFO     | process IDs to be killed: [3123] (in reverse order)
[2025-06-03 14:50:16] 2025-06-03 12:25:01,266 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:50:16] 2025-06-03 12:25:01,267 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:50:16] 2025-06-03 12:25:01,274 | INFO     | did not find any defunct processes belonging to 3123
[2025-06-03 14:50:16] 2025-06-03 12:25:01,277 | INFO     | did not find any defunct processes belonging to 3123
[2025-06-03 14:50:16] 2025-06-03 12:25:01,277 | INFO     | ready for new job
[2025-06-03 14:50:16] 2025-06-03 12:25:01,277 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:50:16] 2025-06-03 12:25:01,279 | INFO     | **************************************
[2025-06-03 14:50:16] 2025-06-03 12:25:01,279 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:50:16] 2025-06-03 12:25:01,279 | INFO     | **************************************
[2025-06-03 14:50:16] 2025-06-03 12:25:01,279 | INFO     | 
[2025-06-03 14:50:16] 2025-06-03 12:25:01,280 | INFO     | pilot is running in a VM
[2025-06-03 14:50:16] 2025-06-03 12:25:01,280 | INFO     | architecture information:
[2025-06-03 14:50:16] 2025-06-03 12:25:01,294 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:50:16] 2025-06-03 12:25:01,608 | INFO     | cat /etc/os-release:
[2025-06-03 14:50:16] NAME="CentOS Linux"
[2025-06-03 14:50:16] VERSION="7 (Core)"
[2025-06-03 14:50:16] ID="centos"
[2025-06-03 14:50:16] ID_LIKE="rhel fedora"
[2025-06-03 14:50:16] VERSION_ID="7"
[2025-06-03 14:50:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:50:16] ANSI_COLOR="0;31"
[2025-06-03 14:50:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:50:16] HOME_URL="https://www.centos.org/"
[2025-06-03 14:50:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:50:16] 
[2025-06-03 14:50:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:50:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:50:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:50:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:50:16] 
[2025-06-03 14:50:16] 2025-06-03 12:25:01,609 | INFO     | **************************************
[2025-06-03 14:50:16] 2025-06-03 12:25:02,112 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 14:50:16] 2025-06-03 12:25:02,370 | INFO     | sufficient remaining disk space (496888709120 B)
[2025-06-03 14:50:16] 2025-06-03 12:25:02,370 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:50:16] 2025-06-03 12:25:02,371 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:50:16] 2025-06-03 12:25:02,371 | INFO     | update_server=False
[2025-06-03 14:50:16] 2025-06-03 12:25:02,371 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:50:16] 2025-06-03 12:25:02,372 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:50:16] 2025-06-03 12:25:02,372 | INFO     | aborting loop
[2025-06-03 14:50:16] 2025-06-03 12:25:02,373 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:50:16] 2025-06-03 12:25:02,488 | INFO     | all job control threads have been joined
[2025-06-03 14:50:16] 2025-06-03 12:25:02,590 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:50:16] 2025-06-03 12:25:02,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:50:16] 2025-06-03 12:25:02,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:50:16] 2025-06-03 12:25:02,712 | INFO     | all data control threads have been joined
[2025-06-03 14:50:16] 2025-06-03 12:25:02,879 | INFO     | all payload control threads have been joined
[2025-06-03 14:50:16] 2025-06-03 12:25:03,377 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:50:16] 2025-06-03 12:25:03,378 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:50:16] 2025-06-03 12:25:03,494 | INFO     | [job] control thread has finished
[2025-06-03 14:50:16] 2025-06-03 12:25:03,540 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:50:16] 2025-06-03 12:25:03,553 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:50:16] 2025-06-03 12:25:03,717 | INFO     | [data] control thread has finished
[2025-06-03 14:50:16] 2025-06-03 12:25:03,885 | INFO     | [payload] control thread has finished
[2025-06-03 14:50:16] 2025-06-03 12:25:03,958 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:50:16] 2025-06-03 12:25:04,274 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:50:16] 2025-06-03 12:25:04,356 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:50:16] 2025-06-03 12:25:04,380 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:50:16] 2025-06-03 12:25:04,546 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:50:16] 2025-06-03 12:25:04,783 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:50:16] 2025-06-03 12:25:04,795 | INFO     | [job] validate thread has finished
[2025-06-03 14:50:16] 2025-06-03 12:25:04,870 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:50:16] 2025-06-03 12:25:04,876 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:50:16] 2025-06-03 12:25:05,573 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:50:16] 2025-06-03 12:25:09,582 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:50:16] 2025-06-03 12:25:10,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140219621668672)>', '<ExcThread(monitor, started 140219173025536)>']
[2025-06-03 14:50:16] 2025-06-03 12:25:10,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:50:16] 2025-06-03 12:25:10,638 | INFO     | [monitor] control thread has ended
[2025-06-03 14:50:16] 2025-06-03 12:25:15,026 | INFO     | all workflow threads have been joined
[2025-06-03 14:50:16] 2025-06-03 12:25:15,026 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:50:16] 2025-06-03 12:25:15,027 | INFO     | traces error code: 0
[2025-06-03 14:50:16] 2025-06-03 12:25:15,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:50:16] 2025-06-03 12:25:15,418 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:50:16] 2025-06-03 12:25:15,518 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:50:16] 2025-06-03 12:25:15,631 [wrapper] pilotpid: 28839
[2025-06-03 14:50:16] 2025-06-03 12:25:15,744 [wrapper] Pilot exit status: 0
[2025-06-03 14:50:16] 2025-06-03 12:25:16,102 [wrapper] pandaids: 6677394165
[2025-06-03 14:50:16] 2025-06-03 12:25:16,752 [wrapper] cleanup supervisor_pilot  3079 28840
[2025-06-03 14:50:16] 2025-06-03 12:25:16,792 [wrapper] Test setup, not cleaning
[2025-06-03 14:50:16] 2025-06-03 12:25:16,885 [wrapper] apfmon messages muted
[2025-06-03 14:50:16] 2025-06-03 12:25:16,987 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:50:16] 2025-06-03 12:25:17,111 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:50:16]  *** Error codes and diagnostics ***
[2025-06-03 14:50:16]     "exeErrorCode": 0,
[2025-06-03 14:50:16]     "exeErrorDiag": "",
[2025-06-03 14:50:16]     "pilotErrorCode": 0,
[2025-06-03 14:50:16]     "pilotErrorDiag": "",
[2025-06-03 14:50:16]  *** Listing of results directory ***
[2025-06-03 14:50:16] total 389784
[2025-06-03 14:50:16] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:18 queuedata.json
[2025-06-03 14:50:16] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:18 pilot3.tar.gz
[2025-06-03 14:50:16] -rwx------. 1 boinc boinc     37140 Jun  2 21:18 runpilot2-wrapper.sh
[2025-06-03 14:50:16] -rw-r--r--. 1 boinc boinc       100 Jun  3 10:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:50:16] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 10:13 run_atlas
[2025-06-03 14:50:16] -rw-r--r--. 1 boinc boinc       105 Jun  3 10:13 job.xml
[2025-06-03 14:50:16] -rw-r--r--. 1 boinc boinc      6392 Jun  3 10:13 init_data.xml
[2025-06-03 14:50:16] -rw-r--r--. 2 boinc boinc 213762410 Jun  3 10:13 EVNT.45006593._000364.pool.root.1
[2025-06-03 14:50:16] -rw-r--r--. 2 boinc boinc     15093 Jun  3 10:13 start_atlas.sh
[2025-06-03 14:50:16] drwxrwx--x. 2 boinc boinc        68 Jun  3 10:13 shared
[2025-06-03 14:50:16] -rw-r--r--. 2 boinc boinc    508875 Jun  3 10:13 input.tar.gz
[2025-06-03 14:50:16] -rw-r--r--. 1 boinc boinc         0 Jun  3 10:13 boinc_lockfile
[2025-06-03 14:50:16] -rw-r--r--. 1 boinc boinc      2521 Jun  3 10:44 pandaJob.out
[2025-06-03 14:50:16] -rw-------. 1 boinc boinc    985498 Jun  3 10:47 agis_schedconf.cvmfs.json
[2025-06-03 14:50:16] drwx------. 4 boinc boinc      4096 Jun  3 10:47 pilot3
[2025-06-03 14:50:16] -rw-------. 1 boinc boinc 178579562 Jun  3 14:22 HITS.45006595._009093.pool.root.1
[2025-06-03 14:50:16] -rw-r--r--. 1 boinc boinc       531 Jun  3 14:22 boinc_task_state.xml
[2025-06-03 14:50:16] -rw-------. 1 boinc boinc      1017 Jun  3 14:23 memory_monitor_summary.json
[2025-06-03 14:50:16] -rw-------. 1 boinc boinc   1603667 Jun  3 14:23 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:50:16] -rw-------. 1 boinc boinc    376208 Jun  3 14:23 log.45006595._009093.job.log.tgz.1
[2025-06-03 14:50:16] -rw-------. 1 boinc boinc        95 Jun  3 14:24 pilot_heartbeat.json
[2025-06-03 14:50:16] -rw-------. 1 boinc boinc      7689 Jun  3 14:24 heartbeat.json
[2025-06-03 14:50:16] -rw-------. 1 boinc boinc      4416 Jun  3 14:25 pilotlog.txt
[2025-06-03 14:50:16] -rw-------. 1 boinc boinc   1110153 Jun  3 14:25 log.45006595._009093.job.log.1
[2025-06-03 14:50:16] -rw-------. 1 boinc boinc       357 Jun  3 14:25 output.list
[2025-06-03 14:50:16] -rw-r--r--. 1 boinc boinc       620 Jun  3 14:25 runtime_log
[2025-06-03 14:50:16] -rw-------. 1 boinc boinc   1505280 Jun  3 14:25 result.tar.gz
[2025-06-03 14:50:16] -rw-r--r--. 1 boinc boinc      8659 Jun  3 14:25 runtime_log.err
[2025-06-03 14:50:16] -rw-------. 1 boinc boinc       656 Jun  3 14:25 86HNDmArPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIHgKDmZyPWNn.diag
[2025-06-03 14:50:16] -rw-r--r--. 1 boinc boinc      8192 Jun  3 14:50 boinc_mmap_file
[2025-06-03 14:50:16] -rw-r--r--. 1 boinc boinc        28 Jun  3 14:50 wrapper_checkpoint.txt
[2025-06-03 14:50:16] -rw-r--r--. 1 boinc boinc     20520 Jun  3 14:50 stderr.txt
[2025-06-03 14:50:16] HITS file was successfully produced:
[2025-06-03 14:50:16] -rw-------. 1 boinc boinc 178579562 Jun  3 14:22 shared/HITS.pool.root.1
[2025-06-03 14:50:16]  *** Contents of shared directory: ***
[2025-06-03 14:50:16] total 385140
[2025-06-03 14:50:16] -rw-r--r--. 2 boinc boinc 213762410 Jun  3 10:13 ATLAS.root_0
[2025-06-03 14:50:16] -rw-r--r--. 2 boinc boinc     15093 Jun  3 10:13 start_atlas.sh
[2025-06-03 14:50:16] -rw-r--r--. 2 boinc boinc    508875 Jun  3 10:13 input.tar.gz
[2025-06-03 14:50:16] -rw-------. 1 boinc boinc 178579562 Jun  3 14:22 HITS.pool.root.1
[2025-06-03 14:50:16] -rw-------. 1 boinc boinc   1505280 Jun  3 14:25 result.tar.gz
14:50:18 (7463): run_atlas exited; CPU time 46028.428977
14:50:18 (7463): called boinc_finish(0)

</stderr_txt>
]]>

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