Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:43:12 (3994491): wrapper (7.7.26015): starting
01:43:12 (3994491): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 01:43:12] Arguments: --nthreads 4
[2025-06-06 01:43:12] Threads: 4
[2025-06-06 01:43:12] Checking for CVMFS
[2025-06-06 01:43:12] No cvmfs_config command found, will try listing directly
[2025-06-06 01:43:12] CVMFS is ok
[2025-06-06 01:43:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 01:43:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 01:43:12] Further information can be found at the LHC@home message board.
[2025-06-06 01:43:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 01:43:12] Checking for apptainer binary...
[2025-06-06 01:43:12] which: no apptainer in ((null))
[2025-06-06 01:43:12] apptainer is not installed, using version from CVMFS
[2025-06-06 01:43:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 01:43:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2025-06-06 01:43:12] apptainer works
[2025-06-06 01:43:12] Set ATHENA_PROC_NUMBER=4
[2025-06-06 01:43:12] Set ATHENA_CORE_NUMBER=4
[2025-06-06 01:43:12] Starting ATLAS job with PandaID=6677401520
[2025-06-06 01:43:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 04:58:27]  *** The last 200 lines of the pilot log: ***
[2025-06-06 04:58:27] 2025-06-06 02:54:44,958 | INFO     | job 6677401520 has finished - writing final server update
[2025-06-06 04:58:27] 2025-06-06 02:54:44,959 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3697713/.job.ad'
[2025-06-06 04:58:27] 2025-06-06 02:54:44,959 | INFO     | total number of processed events: 400 (read)
[2025-06-06 04:58:27] 2025-06-06 02:54:44,963 | INFO     | executing command: lscpu
[2025-06-06 04:58:27] 2025-06-06 02:54:45,013 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 04:58:27] 2025-06-06 02:54:46,748 | INFO     | monitor loop #841: job 0:6677401520 is in state 'finished'
[2025-06-06 04:58:27] 2025-06-06 02:54:46,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 04:58:27] 2025-06-06 02:54:48,442 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 04:58:27] 2025-06-06 02:54:48,442 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6677401520/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 04:58:27] 2025-06-06 02:54:48,443 | INFO     | extracted standard info from prmon json
[2025-06-06 04:58:27] 2025-06-06 02:54:48,443 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 04:58:27] 2025-06-06 02:54:48,443 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 04:58:27] 2025-06-06 02:54:48,444 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 04:58:27] 2025-06-06 02:54:48,444 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 04:58:27] 2025-06-06 02:54:48,449 | INFO     | fitting pss+swap vs Time
[2025-06-06 04:58:27] 2025-06-06 02:54:48,449 | INFO     | sum of square deviations: 2060343747.0
[2025-06-06 04:58:27] 2025-06-06 02:54:48,451 | INFO     | sum of deviations: 12368419536.0
[2025-06-06 04:58:27] 2025-06-06 02:54:48,451 | INFO     | mean x: 1749172733.5
[2025-06-06 04:58:27] 2025-06-06 02:54:48,451 | INFO     | mean y: 2322305.4574468085
[2025-06-06 04:58:27] 2025-06-06 02:54:48,451 | INFO     | -- intersect: -10498111052.015654
[2025-06-06 04:58:27] 2025-06-06 02:54:48,451 | INFO     | intersect: -10498111052.015654
[2025-06-06 04:58:27] 2025-06-06 02:54:48,452 | INFO     | chi2: 1.790876654705686
[2025-06-06 04:58:27] 2025-06-06 02:54:48,452 | INFO     | sum of square deviations: 1900284932.0
[2025-06-06 04:58:27] 2025-06-06 02:54:48,454 | INFO     | sum of deviations: 11966801514.0
[2025-06-06 04:58:27] 2025-06-06 02:54:48,454 | INFO     | mean x: 1749172581.0
[2025-06-06 04:58:27] 2025-06-06 02:54:48,454 | INFO     | mean y: 2321922.8360655736
[2025-06-06 04:58:27] 2025-06-06 02:54:48,454 | INFO     | -- intersect: -11012868872.013687
[2025-06-06 04:58:27] 2025-06-06 02:54:48,454 | INFO     | intersect: -11012868872.013687
[2025-06-06 04:58:27] 2025-06-06 02:54:48,455 | INFO     | chi2: 1.7920921250508792
[2025-06-06 04:58:27] 2025-06-06 02:54:48,455 | INFO     | current chi2=1.7920921250508792 (change=-0.06787013175918333 %)
[2025-06-06 04:58:27] 2025-06-06 02:54:48,455 | INFO     | right removable region: 182
[2025-06-06 04:58:27] 2025-06-06 02:54:48,455 | INFO     | sum of square deviations: 1900284932.0
[2025-06-06 04:58:27] 2025-06-06 02:54:48,457 | INFO     | sum of deviations: -18908464447.0
[2025-06-06 04:58:27] 2025-06-06 02:54:48,457 | INFO     | mean x: 1749172886.0
[2025-06-06 04:58:27] 2025-06-06 02:54:48,457 | INFO     | mean y: 2351817.830601093
[2025-06-06 04:58:27] 2025-06-06 02:54:48,457 | INFO     | -- intersect: 17407201358.882153
[2025-06-06 04:58:27] 2025-06-06 02:54:48,458 | INFO     | intersect: 17407201358.882153
[2025-06-06 04:58:27] 2025-06-06 02:54:48,458 | INFO     | chi2: 0.09338836293772845
[2025-06-06 04:58:27] 2025-06-06 02:54:48,458 | INFO     | current chi2=0.09338836293772845 (change=94.78532691280876 %)
[2025-06-06 04:58:27] 2025-06-06 02:54:48,459 | INFO     | sum of square deviations: 1748737904.5
[2025-06-06 04:58:27] 2025-06-06 02:54:48,460 | INFO     | sum of deviations: -17526828294.0
[2025-06-06 04:58:27] 2025-06-06 02:54:48,460 | INFO     | mean x: 1749173038.5
[2025-06-06 04:58:27] 2025-06-06 02:54:48,460 | INFO     | mean y: 2350389.5280898875
[2025-06-06 04:58:27] 2025-06-06 02:54:48,461 | INFO     | -- intersect: 17533539839.58427
[2025-06-06 04:58:27] 2025-06-06 02:54:48,461 | INFO     | intersect: 17533539839.58427
[2025-06-06 04:58:27] 2025-06-06 02:54:48,461 | INFO     | chi2: 0.08560166337498236
[2025-06-06 04:58:27] 2025-06-06 02:54:48,461 | INFO     | current chi2=0.08560166337498236 (change=8.337976293618382 %)
[2025-06-06 04:58:27] 2025-06-06 02:54:48,461 | INFO     | left removable region: 20
[2025-06-06 04:58:27] 2025-06-06 02:54:48,462 | INFO     | sum of square deviations: 1318277740.5
[2025-06-06 04:58:27] 2025-06-06 02:54:48,463 | INFO     | sum of deviations: -9181176185.0
[2025-06-06 04:58:27] 2025-06-06 02:54:48,463 | INFO     | mean x: 1749173160.5
[2025-06-06 04:58:27] 2025-06-06 02:54:48,463 | INFO     | mean y: 2341586.864197531
[2025-06-06 04:58:27] 2025-06-06 02:54:48,463 | INFO     | -- intersect: 12184499011.848635
[2025-06-06 04:58:27] 2025-06-06 02:54:48,463 | INFO     | intersect: 12184499011.848635
[2025-06-06 04:58:27] 2025-06-06 02:54:48,464 | INFO     | chi2: 0.0633963043387187
[2025-06-06 04:58:27] 2025-06-06 02:54:48,464 | INFO     | -- intersect: 12184499011.848635
[2025-06-06 04:58:27] 2025-06-06 02:54:48,464 | INFO     | current memory leak: -6.96 B/s (using 162 data points, chi2=0.06)
[2025-06-06 04:58:27] 2025-06-06 02:54:48,465 | INFO     | ..............................
[2025-06-06 04:58:27] 2025-06-06 02:54:48,465 | INFO     | . Timing measurements:
[2025-06-06 04:58:27] 2025-06-06 02:54:48,465 | INFO     | . get job = 0 s
[2025-06-06 04:58:27] 2025-06-06 02:54:48,465 | INFO     | . initial setup = 1 s
[2025-06-06 04:58:27] 2025-06-06 02:54:48,465 | INFO     | . payload setup = 7 s
[2025-06-06 04:58:27] 2025-06-06 02:54:48,466 | INFO     | . stage-in = 0 s
[2025-06-06 04:58:27] 2025-06-06 02:54:48,466 | INFO     | . payload execution = 11452 s
[2025-06-06 04:58:27] 2025-06-06 02:54:48,466 | INFO     | . stage-out = 1 s
[2025-06-06 04:58:27] 2025-06-06 02:54:48,466 | INFO     | . log creation = 0 s
[2025-06-06 04:58:27] 2025-06-06 02:54:48,466 | INFO     | ..............................
[2025-06-06 04:58:27] 2025-06-06 02:54:48,598 | INFO     | 
[2025-06-06 04:58:27] 2025-06-06 02:54:48,599 | INFO     | job summary report
[2025-06-06 04:58:27] 2025-06-06 02:54:48,599 | INFO     | --------------------------------------------------
[2025-06-06 04:58:27] 2025-06-06 02:54:48,599 | INFO     | PanDA job id: 6677401520
[2025-06-06 04:58:27] 2025-06-06 02:54:48,599 | INFO     | task id: 45006595
[2025-06-06 04:58:27] 2025-06-06 02:54:48,599 | INFO     | errors: (none)
[2025-06-06 04:58:27] 2025-06-06 02:54:48,599 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 04:58:27] 2025-06-06 02:54:48,600 | INFO     | pilot state: finished 
[2025-06-06 04:58:27] 2025-06-06 02:54:48,600 | INFO     | transexitcode: 0
[2025-06-06 04:58:27] 2025-06-06 02:54:48,600 | INFO     | exeerrorcode: 0
[2025-06-06 04:58:27] 2025-06-06 02:54:48,600 | INFO     | exeerrordiag: 
[2025-06-06 04:58:27] 2025-06-06 02:54:48,600 | INFO     | exitcode: 0
[2025-06-06 04:58:27] 2025-06-06 02:54:48,600 | INFO     | exitmsg: OK
[2025-06-06 04:58:27] 2025-06-06 02:54:48,600 | INFO     | cpuconsumptiontime: 43655 s
[2025-06-06 04:58:27] 2025-06-06 02:54:48,601 | INFO     | nevents: 400
[2025-06-06 04:58:27] 2025-06-06 02:54:48,601 | INFO     | neventsw: 0
[2025-06-06 04:58:27] 2025-06-06 02:54:48,601 | INFO     | pid: 4014700
[2025-06-06 04:58:27] 2025-06-06 02:54:48,601 | INFO     | pgrp: 4014700
[2025-06-06 04:58:27] 2025-06-06 02:54:48,601 | INFO     | corecount: 4
[2025-06-06 04:58:27] 2025-06-06 02:54:48,601 | INFO     | event service: False
[2025-06-06 04:58:27] 2025-06-06 02:54:48,601 | INFO     | sizes: {0: 2397351, 1: 2397351, 5: 2397585, 11: 2397641, 11463: 2426619, 11464: 2435582, 11465: 2435766, 11470: 2435936}
[2025-06-06 04:58:27] 2025-06-06 02:54:48,602 | INFO     | --------------------------------------------------
[2025-06-06 04:58:27] 2025-06-06 02:54:48,602 | INFO     | 
[2025-06-06 04:58:27] 2025-06-06 02:54:48,602 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-06-06 04:58:27] 2025-06-06 02:54:48,624 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,624 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,624 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,625 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,625 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,625 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,625 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,626 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,626 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,626 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,626 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,626 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,626 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,627 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,627 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,627 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,627 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,627 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 04:58:27] 2025-06-06 02:54:48,627 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,628 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 04:58:27] 2025-06-06 02:54:48,628 | INFO     | job 6677401520 has completed (purged errors)
[2025-06-06 04:58:27] 2025-06-06 02:54:48,628 | INFO     | overall cleanup function is called
[2025-06-06 04:58:27] 2025-06-06 02:54:49,637 | INFO     | --- collectZombieJob: --- 10, [4014700]
[2025-06-06 04:58:27] 2025-06-06 02:54:49,637 | INFO     | zombie collector waiting for pid 4014700
[2025-06-06 04:58:27] 2025-06-06 02:54:49,637 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 04:58:27] 2025-06-06 02:54:49,638 | INFO     | collected zombie processes
[2025-06-06 04:58:27] 2025-06-06 02:54:49,638 | INFO     | will attempt to kill all subprocesses of pid=4014700
[2025-06-06 04:58:27] 2025-06-06 02:54:49,942 | INFO     | process IDs to be killed: [4014700] (in reverse order)
[2025-06-06 04:58:27] 2025-06-06 02:54:50,026 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 04:58:27] 2025-06-06 02:54:50,026 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 04:58:27] 2025-06-06 02:54:50,035 | INFO     | did not find any defunct processes belonging to 4014700
[2025-06-06 04:58:27] 2025-06-06 02:54:50,044 | INFO     | did not find any defunct processes belonging to 4014700
[2025-06-06 04:58:27] 2025-06-06 02:54:50,044 | INFO     | ready for new job
[2025-06-06 04:58:27] 2025-06-06 02:54:50,044 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 04:58:27] 2025-06-06 02:54:50,046 | INFO     | **************************************
[2025-06-06 04:58:27] 2025-06-06 02:54:50,046 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 04:58:27] 2025-06-06 02:54:50,047 | INFO     | **************************************
[2025-06-06 04:58:27] 2025-06-06 02:54:50,047 | INFO     | 
[2025-06-06 04:58:27] 2025-06-06 02:54:50,049 | INFO     | architecture information:
[2025-06-06 04:58:27] 2025-06-06 02:54:50,050 | INFO     | executing command: cat /etc/os-release
[2025-06-06 04:58:27] 2025-06-06 02:54:50,063 | INFO     | cat /etc/os-release:
[2025-06-06 04:58:27] NAME="CentOS Linux"
[2025-06-06 04:58:27] VERSION="7 (Core)"
[2025-06-06 04:58:27] ID="centos"
[2025-06-06 04:58:27] ID_LIKE="rhel fedora"
[2025-06-06 04:58:27] VERSION_ID="7"
[2025-06-06 04:58:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 04:58:27] ANSI_COLOR="0;31"
[2025-06-06 04:58:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 04:58:27] HOME_URL="https://www.centos.org/"
[2025-06-06 04:58:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 04:58:27] 
[2025-06-06 04:58:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 04:58:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 04:58:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 04:58:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 04:58:27] 
[2025-06-06 04:58:27] 2025-06-06 02:54:50,063 | INFO     | **************************************
[2025-06-06 04:58:27] 2025-06-06 02:54:50,564 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-06-06 04:58:27] 2025-06-06 02:54:50,578 | INFO     | sufficient remaining disk space (1642322722816 B)
[2025-06-06 04:58:27] 2025-06-06 02:54:50,578 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 04:58:27] 2025-06-06 02:54:50,579 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 04:58:27] 2025-06-06 02:54:50,579 | INFO     | update_server=False
[2025-06-06 04:58:27] 2025-06-06 02:54:50,579 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 04:58:27] 2025-06-06 02:54:50,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 04:58:27] 2025-06-06 02:54:50,580 | INFO     | aborting loop
[2025-06-06 04:58:27] 2025-06-06 02:54:50,580 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 04:58:27] 2025-06-06 02:54:50,580 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 04:58:27] 2025-06-06 02:54:50,699 | INFO     | all payload control threads have been joined
[2025-06-06 04:58:27] 2025-06-06 02:54:50,773 | INFO     | all job control threads have been joined
[2025-06-06 04:58:27] 2025-06-06 02:54:51,188 | INFO     | all data control threads have been joined
[2025-06-06 04:58:27] 2025-06-06 02:54:51,347 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 04:58:27] 2025-06-06 02:54:51,347 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 04:58:27] 2025-06-06 02:54:51,348 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 04:58:27] 2025-06-06 02:54:51,585 | INFO     | [job] retrieve thread has finished
[2025-06-06 04:58:27] 2025-06-06 02:54:51,585 | INFO     | [job] job monitor thread has finished
[2025-06-06 04:58:27] 2025-06-06 02:54:51,586 | INFO     | [job] queue monitor thread has finished
[2025-06-06 04:58:27] 2025-06-06 02:54:51,600 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 04:58:27] 2025-06-06 02:54:51,704 | INFO     | [payload] control thread has finished
[2025-06-06 04:58:27] 2025-06-06 02:54:51,778 | INFO     | [job] control thread has finished
[2025-06-06 04:58:27] 2025-06-06 02:54:51,845 | INFO     | [job] validate thread has finished
[2025-06-06 04:58:27] 2025-06-06 02:54:52,007 | INFO     | [payload] failed_post thread has finished
[2025-06-06 04:58:27] 2025-06-06 02:54:52,043 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 04:58:27] 2025-06-06 02:54:52,063 | INFO     | [data] copytool_in thread has finished
[2025-06-06 04:58:27] 2025-06-06 02:54:52,194 | INFO     | [data] control thread has finished
[2025-06-06 04:58:27] 2025-06-06 02:54:52,197 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 04:58:27] 2025-06-06 02:54:52,252 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 04:58:27] 2025-06-06 02:54:52,935 | INFO     | [payload] validate_post thread has finished
[2025-06-06 04:58:27] 2025-06-06 02:54:53,605 | INFO     | [data] copytool_out thread has finished
[2025-06-06 04:58:27] 2025-06-06 02:54:54,586 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 04:58:27] 2025-06-06 02:55:01,207 | INFO     | job.realtimelogging is not enabled
[2025-06-06 04:58:27] 2025-06-06 02:55:02,212 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 04:58:27] 2025-06-06 02:55:03,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23072148551488)>', '<ExcThread(monitor, started 23071903663872)>']
[2025-06-06 04:58:27] 2025-06-06 02:55:03,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 04:58:27] 2025-06-06 02:55:03,406 | INFO     | [monitor] control thread has ended
[2025-06-06 04:58:27] 2025-06-06 02:55:08,025 | INFO     | all workflow threads have been joined
[2025-06-06 04:58:27] 2025-06-06 02:55:08,026 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 04:58:27] 2025-06-06 02:55:08,026 | INFO     | traces error code: 0
[2025-06-06 04:58:27] 2025-06-06 02:55:08,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 04:58:27] 2025-06-06 02:55:08,148 [wrapper] ==== pilot stdout END ====
[2025-06-06 04:58:27] 2025-06-06 02:55:08,150 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 04:58:27] 2025-06-06 02:55:08,153 [wrapper] pilotpid: 4000206
[2025-06-06 04:58:27] 2025-06-06 02:55:08,156 [wrapper] Pilot exit status: 0
[2025-06-06 04:58:27] 2025-06-06 02:55:08,166 [wrapper] pandaids: 6677401520
[2025-06-06 04:58:27] 2025-06-06 02:55:08,221 [wrapper] cleanup supervisor_pilot 4175372 4000207
[2025-06-06 04:58:27] 2025-06-06 02:55:08,224 [wrapper] Test setup, not cleaning
[2025-06-06 04:58:27] 2025-06-06 02:55:08,227 [wrapper] apfmon messages muted
[2025-06-06 04:58:27] 2025-06-06 02:55:08,229 [wrapper] ==== wrapper stdout END ====
[2025-06-06 04:58:27] 2025-06-06 02:55:08,232 [wrapper] ==== wrapper stderr END ====
[2025-06-06 04:58:27]  *** Error codes and diagnostics ***
[2025-06-06 04:58:27]     "exeErrorCode": 0,
[2025-06-06 04:58:27]     "exeErrorDiag": "",
[2025-06-06 04:58:27]     "pilotErrorCode": 0,
[2025-06-06 04:58:27]     "pilotErrorDiag": "",
[2025-06-06 04:58:27]  *** Listing of results directory ***
[2025-06-06 04:58:27] total 388908
[2025-06-06 04:58:27] -rw-r--r-- 1 boinc boinc    495897 Jun  2 23:10 pilot3.tar.gz
[2025-06-06 04:58:27] -rw-r--r-- 1 boinc boinc      5111 Jun  2 23:21 queuedata.json
[2025-06-06 04:58:27] -rwx------ 1 boinc boinc     37140 Jun  2 23:22 runpilot2-wrapper.sh
[2025-06-06 04:58:27] -rw-r--r-- 1 boinc boinc       100 Jun  6 01:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 04:58:27] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 01:43 run_atlas
[2025-06-06 04:58:27] -rw-r--r-- 1 boinc boinc       105 Jun  6 01:43 job.xml
[2025-06-06 04:58:27] -rw-r--r-- 1 boinc boinc      6421 Jun  6 01:43 init_data.xml
[2025-06-06 04:58:27] -rw-r--r-- 2 boinc boinc 214983205 Jun  6 01:43 EVNT.45006593._000487.pool.root.1
[2025-06-06 04:58:27] drwxrwx--x 2 boinc boinc      4096 Jun  6 01:43 shared
[2025-06-06 04:58:27] -rw-r--r-- 2 boinc boinc    508880 Jun  6 01:43 input.tar.gz
[2025-06-06 04:58:27] -rw-r--r-- 2 boinc boinc     15093 Jun  6 01:43 start_atlas.sh
[2025-06-06 04:58:27] -rw-r--r-- 1 boinc boinc         0 Jun  6 01:43 boinc_lockfile
[2025-06-06 04:58:27] -rw-r--r-- 1 boinc boinc      2524 Jun  6 01:43 pandaJob.out
[2025-06-06 04:58:27] -rw------- 1 boinc boinc    987721 Jun  6 01:43 agis_schedconf.cvmfs.json
[2025-06-06 04:58:27] drwx------ 4 boinc boinc      4096 Jun  6 01:43 pilot3
[2025-06-06 04:58:27] -rw------- 1 boinc boinc 176611860 Jun  6 04:54 HITS.45006595._012174.pool.root.1
[2025-06-06 04:58:27] -rw-r--r-- 1 boinc boinc       529 Jun  6 04:54 boinc_task_state.xml
[2025-06-06 04:58:27] -rw------- 1 boinc boinc        95 Jun  6 04:54 pilot_heartbeat.json
[2025-06-06 04:58:27] -rw------- 1 boinc boinc      1032 Jun  6 04:54 memory_monitor_summary.json
[2025-06-06 04:58:27] -rw------- 1 boinc boinc   1598969 Jun  6 04:54 agis_ddmendpoints.agis.ALL.json
[2025-06-06 04:58:27] -rw------- 1 boinc boinc    321660 Jun  6 04:54 log.45006595._012174.job.log.tgz.1
[2025-06-06 04:58:27] -rw------- 1 boinc boinc      7726 Jun  6 04:54 heartbeat.json
[2025-06-06 04:58:27] -rw------- 1 boinc boinc      4436 Jun  6 04:55 pilotlog.txt
[2025-06-06 04:58:27] -rw------- 1 boinc boinc   1080058 Jun  6 04:55 log.45006595._012174.job.log.1
[2025-06-06 04:58:27] -rw------- 1 boinc boinc       357 Jun  6 04:55 output.list
[2025-06-06 04:58:27] -rw-r--r-- 1 boinc boinc       620 Jun  6 04:55 runtime_log
[2025-06-06 04:58:27] -rw------- 1 boinc boinc   1423360 Jun  6 04:55 result.tar.gz
[2025-06-06 04:58:27] -rw-r--r-- 1 boinc boinc      9026 Jun  6 04:55 runtime_log.err
[2025-06-06 04:58:27] -rw------- 1 boinc boinc       664 Jun  6 04:55 8XULDmOnRg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRmgKDmJeeUQn.diag
[2025-06-06 04:58:27] -rw-r--r-- 1 boinc boinc        26 Jun  6 04:58 wrapper_checkpoint.txt
[2025-06-06 04:58:27] -rw-r--r-- 1 boinc boinc      8192 Jun  6 04:58 boinc_mmap_file
[2025-06-06 04:58:27] -rw-r--r-- 1 boinc boinc     20916 Jun  6 04:58 stderr.txt
[2025-06-06 04:58:27] HITS file was successfully produced:
[2025-06-06 04:58:27] -rw------- 1 boinc boinc 176611860 Jun  6 04:54 shared/HITS.pool.root.1
[2025-06-06 04:58:27]  *** Contents of shared directory: ***
[2025-06-06 04:58:27] total 384340
[2025-06-06 04:58:27] -rw-r--r-- 2 boinc boinc 214983205 Jun  6 01:43 ATLAS.root_0
[2025-06-06 04:58:27] -rw-r--r-- 2 boinc boinc    508880 Jun  6 01:43 input.tar.gz
[2025-06-06 04:58:27] -rw-r--r-- 2 boinc boinc     15093 Jun  6 01:43 start_atlas.sh
[2025-06-06 04:58:27] -rw------- 1 boinc boinc 176611860 Jun  6 04:54 HITS.pool.root.1
[2025-06-06 04:58:27] -rw------- 1 boinc boinc   1423360 Jun  6 04:55 result.tar.gz
04:58:29 (3994491): run_atlas exited; CPU time 44066.737890
04:58:29 (3994491): called boinc_finish(0)

</stderr_txt>
]]>

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