Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:50:33 (4115734): wrapper (7.7.26015): starting
18:50:33 (4115734): wrapper: running run_atlas (--nthreads 12)
[2025-06-02 18:50:33] Arguments: --nthreads 12
[2025-06-02 18:50:33] Threads: 12
[2025-06-02 18:50:33] Checking for CVMFS
[2025-06-02 18:50:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 18:50:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 18:50:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 18:50:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 18:50:34] 2.11.5.0 1172203 21565 247308 146725 0 360 26441211 45568000 11732 130560 0 221905537 99.809 134934455 28495 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-02 18:50:34] CVMFS is ok
[2025-06-02 18:50:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 18:50:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 18:50:34] Further information can be found at the LHC@home message board.
[2025-06-02 18:50:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 18:50:34] Checking for apptainer binary...
[2025-06-02 18:50:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 18:50:34] Running /usr/bin/apptainer --version
[2025-06-02 18:50:34] apptainer version 1.4.0-1.el9
[2025-06-02 18:50:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 18:50:34] wns0066.triumf.lcg
[2025-06-02 18:50:34] apptainer works
[2025-06-02 18:50:34] Set ATHENA_PROC_NUMBER=12
[2025-06-02 18:50:34] Set ATHENA_CORE_NUMBER=12
[2025-06-02 18:50:34] Starting ATLAS job with PandaID=6677419844
[2025-06-02 18:50:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 18:53:34]  *** The last 200 lines of the pilot log: ***
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | INFO     | extracted standard info from prmon json
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | WARNING  | found no stored workdir sizes
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | WARNING  | wrong length of table data, x=[1748915464.0], y=[1318.0] (must be same and length>=4)
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | ..............................
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . Timing measurements:
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . get job = 0 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . initial setup = 2 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . payload setup = 3 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . stage-in = 0 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . payload execution = 14 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . stage-out = 0 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . log creation = 0 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,096 | INFO     | ..............................
[2025-06-02 18:53:34] 2025-06-03 01:53:20,096 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 18:53:34] 2025-06-03 01:53:20,096 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677419844/pilotlog.txt
[2025-06-02 18:53:34] 2025-06-03 01:53:20,104 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 18:53:34] - Log from pilotlog.txt -
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | INFO     | extracted standard info from prmon json
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | WARNING  | found no stored workdir sizes
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | WARNING  | wrong length of table data, x=[1748915464.0], y=[1318.0] (must be same and length>=4)
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | ..............................
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . Timing measurements:
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . get job = 0 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . initial setup = 2 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . payload setup = 3 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . stage-in = 0 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . payload execution = 14 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . stage-out = 0 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . log creation = 0 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,096 | INFO     | ..............................
[2025-06-02 18:53:34] 2025-06-03 01:53:20,096 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 18:53:34] 2025-06-03 01:53:20,096 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677419844/pilotlog.txt
[2025-06-02 18:53:34] 2025-06-03 01:53:20,105 | WARNING  | 
[2025-06-02 18:53:34] [begin log extracts]
[2025-06-02 18:53:34] - Log from pilotlog.txt -
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | INFO     | extracted standard info from prmon json
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | WARNING  | found no stored workdir sizes
[2025-06-02 18:53:34] 2025-06-03 01:53:20,094 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | WARNING  | wrong length of table data, x=[1748915464.0], y=[1318.0] (must be same and length>=4)
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | ..............................
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . Timing measurements:
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . get job = 0 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . initial setup = 2 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . payload setup = 3 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . stage-in = 0 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . payload execution = 14 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . stage-out = 0 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,095 | INFO     | . log creation = 0 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,096 | INFO     | ..............................
[2025-06-02 18:53:34] 2025-06-03 01:53:20,096 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 18:53:34] 2025-06-03 01:53:20,096 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677419844/pilotlog.txt
[2025-06-02 18:53:34] [end log extracts]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,105 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 18:53:34] 2025-06-03 01:53:20,106 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 18:53:34] 2025-06-03 01:53:20,488 | INFO     | 
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | job summary report
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | --------------------------------------------------
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | PanDA job id: 6677419844
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | task id: 45006595
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 18:51:10,637 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | pilot state: failed 
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | transexitcode: 65
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | exeerrorcode: 65
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | exitcode: 65
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | cpuconsumptiontime: 15 s
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | nevents: 0
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | neventsw: 0
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | pid: 4125610
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | pgrp: 4125610
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | corecount: 12
[2025-06-02 18:53:34] 2025-06-03 01:53:20,489 | INFO     | event service: False
[2025-06-02 18:53:34] 2025-06-03 01:53:20,490 | INFO     | sizes: {0: 2405128, 3: 2405334, 11: 2405362, 21: 2428534, 22: 2428510, 23: 2432773, 25: 2432929, 144: 2433071}
[2025-06-02 18:53:34] 2025-06-03 01:53:20,490 | INFO     | --------------------------------------------------
[2025-06-02 18:53:34] 2025-06-03 01:53:20,490 | INFO     | 
[2025-06-02 18:53:34] 2025-06-03 01:53:20,490 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 18:53:34] 2025-06-03 01:53:20,505 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,505 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,505 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,505 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,506 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,506 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,506 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,506 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,506 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,506 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,506 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,506 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,506 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,506 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,506 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,506 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,506 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,506 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 18:53:34] 2025-06-03 01:53:20,506 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,506 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 18:53:34] 2025-06-03 01:53:20,506 | INFO     | job 6677419844 has completed (purged errors)
[2025-06-02 18:53:34] 2025-06-03 01:53:20,506 | INFO     | overall cleanup function is called
[2025-06-02 18:53:34] 2025-06-03 01:53:21,512 | INFO     | --- collectZombieJob: --- 10, [4125610]
[2025-06-02 18:53:34] 2025-06-03 01:53:21,513 | INFO     | zombie collector waiting for pid 4125610
[2025-06-02 18:53:34] 2025-06-03 01:53:21,513 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 18:53:34] 2025-06-03 01:53:21,513 | INFO     | collected zombie processes
[2025-06-02 18:53:34] 2025-06-03 01:53:21,513 | INFO     | will attempt to kill all subprocesses of pid=4125610
[2025-06-02 18:53:34] 2025-06-03 01:53:21,651 | INFO     | process IDs to be killed: [4125610] (in reverse order)
[2025-06-02 18:53:34] 2025-06-03 01:53:21,708 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 18:53:34] 2025-06-03 01:53:21,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 18:53:34] 2025-06-03 01:53:21,715 | INFO     | did not find any defunct processes belonging to 4125610
[2025-06-02 18:53:34] 2025-06-03 01:53:21,720 | INFO     | did not find any defunct processes belonging to 4125610
[2025-06-02 18:53:34] 2025-06-03 01:53:21,721 | INFO     | ready for new job
[2025-06-02 18:53:34] 2025-06-03 01:53:21,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 18:53:34] 2025-06-03 01:53:21,722 | INFO     | **************************************
[2025-06-02 18:53:34] 2025-06-03 01:53:21,722 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 18:53:34] 2025-06-03 01:53:21,722 | INFO     | **************************************
[2025-06-02 18:53:34] 2025-06-03 01:53:21,722 | INFO     | 
[2025-06-02 18:53:34] 2025-06-03 01:53:21,724 | INFO     | architecture information:
[2025-06-02 18:53:34] 2025-06-03 01:53:21,725 | INFO     | executing command: cat /etc/os-release
[2025-06-02 18:53:34] 2025-06-03 01:53:21,734 | INFO     | cat /etc/os-release:
[2025-06-02 18:53:34] NAME="CentOS Linux"
[2025-06-02 18:53:34] VERSION="7 (Core)"
[2025-06-02 18:53:34] ID="centos"
[2025-06-02 18:53:34] ID_LIKE="rhel fedora"
[2025-06-02 18:53:34] VERSION_ID="7"
[2025-06-02 18:53:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 18:53:34] ANSI_COLOR="0;31"
[2025-06-02 18:53:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 18:53:34] HOME_URL="https://www.centos.org/"
[2025-06-02 18:53:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 18:53:34] 
[2025-06-02 18:53:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 18:53:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 18:53:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 18:53:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 18:53:34] 
[2025-06-02 18:53:34] 2025-06-03 01:53:21,735 | INFO     | **************************************
[2025-06-02 18:53:34] 2025-06-03 01:53:22,238 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 18:53:34] 2025-06-03 01:53:22,252 | INFO     | sufficient remaining disk space (2003254116352 B)
[2025-06-02 18:53:34] 2025-06-03 01:53:22,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 18:53:34] 2025-06-03 01:53:22,252 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 18:53:34] 2025-06-03 01:53:22,252 | INFO     | update_server=False
[2025-06-02 18:53:34] 2025-06-03 01:53:22,253 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 18:53:34] 2025-06-03 01:53:22,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 18:53:34] 2025-06-03 01:53:22,326 | INFO     | all data control threads have been joined
[2025-06-02 18:53:34] 2025-06-03 01:53:22,624 | INFO     | all job control threads have been joined
[2025-06-02 18:53:34] 2025-06-03 01:53:22,661 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 18:53:34] 2025-06-03 01:53:22,662 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 18:53:34] 2025-06-03 01:53:22,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 18:53:34] 2025-06-03 01:53:23,039 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 18:53:34] 2025-06-03 01:53:23,040 | INFO     | aborting loop
[2025-06-02 18:53:34] 2025-06-03 01:53:23,257 | INFO     | [job] retrieve thread has finished
[2025-06-02 18:53:34] 2025-06-03 01:53:23,274 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 18:53:34] 2025-06-03 01:53:23,287 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 18:53:34] 2025-06-03 01:53:23,308 | INFO     | all payload control threads have been joined
[2025-06-02 18:53:34] 2025-06-03 01:53:23,330 | INFO     | [data] control thread has finished
[2025-06-02 18:53:34] 2025-06-03 01:53:23,405 | INFO     | [payload] validate_post thread has finished
[2025-06-02 18:53:34] 2025-06-03 01:53:23,629 | INFO     | [job] control thread has finished
[2025-06-02 18:53:34] 2025-06-03 01:53:23,749 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 18:53:34] 2025-06-03 01:53:23,852 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 18:53:34] 2025-06-03 01:53:23,935 | INFO     | [payload] failed_post thread has finished
[2025-06-02 18:53:34] 2025-06-03 01:53:24,045 | INFO     | [job] job monitor thread has finished
[2025-06-02 18:53:34] 2025-06-03 01:53:24,258 | INFO     | [data] copytool_out thread has finished
[2025-06-02 18:53:34] 2025-06-03 01:53:24,313 | INFO     | [payload] control thread has finished
[2025-06-02 18:53:34] 2025-06-03 01:53:24,522 | INFO     | [job] validate thread has finished
[2025-06-02 18:53:34] 2025-06-03 01:53:24,673 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 18:53:34] 2025-06-03 01:53:24,674 | INFO     | [data] copytool_in thread has finished
[2025-06-02 18:53:34] 2025-06-03 01:53:25,180 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 18:53:34] 2025-06-03 01:53:26,185 | INFO     | [job] queue monitor thread has finished
[2025-06-02 18:53:34] 2025-06-03 01:53:27,754 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 18:53:34] 2025-06-03 01:53:29,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140172852107072)>', '<ExcThread(monitor, started 140171945170688)>']
[2025-06-02 18:53:34] 2025-06-03 01:53:29,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 18:53:34] 2025-06-03 01:53:29,700 | INFO     | [monitor] control thread has ended
[2025-06-02 18:53:34] 2025-06-03 01:53:34,079 | INFO     | all workflow threads have been joined
[2025-06-02 18:53:34] 2025-06-03 01:53:34,079 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 18:53:34] 2025-06-03 01:53:34,080 | INFO     | traces error code: 0
[2025-06-02 18:53:34] 2025-06-03 01:53:34,080 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 18:53:34] 2025-06-03 01:53:34,191 [wrapper] ==== pilot stdout END ====
[2025-06-02 18:53:34] 2025-06-03 01:53:34,193 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 18:53:34] 2025-06-03 01:53:34,195 [wrapper] pilotpid: 4119298
[2025-06-02 18:53:34] 2025-06-03 01:53:34,197 [wrapper] Pilot exit status: 0
[2025-06-02 18:53:34] 2025-06-03 01:53:34,207 [wrapper] pandaids: 6677419844
[2025-06-02 18:53:34] 2025-06-03 01:53:34,241 [wrapper] cleanup supervisor_pilot 4119304 4119299
[2025-06-02 18:53:34] 2025-06-03 01:53:34,243 [wrapper] Test setup, not cleaning
[2025-06-02 18:53:34] 2025-06-03 01:53:34,246 [wrapper] apfmon messages muted
[2025-06-02 18:53:34] 2025-06-03 01:53:34,248 [wrapper] ==== wrapper stdout END ====
[2025-06-02 18:53:34] 2025-06-03 01:53:34,250 [wrapper] ==== wrapper stderr END ====
[2025-06-02 18:53:34]  *** Error codes and diagnostics ***
[2025-06-02 18:53:34]     "exeErrorCode": 65,
[2025-06-02 18:53:34]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 18:53:34]     "pilotErrorCode": 1305,
[2025-06-02 18:53:34]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 18:53:34]  *** Listing of results directory ***
[2025-06-02 18:53:34] total 213368
[2025-06-02 18:53:34] -rw-r--r--. 1 boinc boinc    495897 Jun  2 16:21 pilot3.tar.gz
[2025-06-02 18:53:34] -rw-r--r--. 1 boinc boinc      5111 Jun  2 16:34 queuedata.json
[2025-06-02 18:53:34] -rwx------. 1 boinc boinc     37140 Jun  2 16:36 runpilot2-wrapper.sh
[2025-06-02 18:53:34] -rw-r--r--. 1 boinc boinc       100 Jun  2 18:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 18:53:34] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 18:50 run_atlas
[2025-06-02 18:53:34] -rw-r--r--. 1 boinc boinc       105 Jun  2 18:50 job.xml
[2025-06-02 18:53:34] -rw-r--r--. 1 boinc boinc      6602 Jun  2 18:50 init_data.xml
[2025-06-02 18:53:34] -rw-r--r--. 2 boinc boinc 214465981 Jun  2 18:50 EVNT.45006593._000579.pool.root.1
[2025-06-02 18:53:34] -rw-r--r--. 2 boinc boinc     15093 Jun  2 18:50 start_atlas.sh
[2025-06-02 18:53:34] drwxrwx--x. 2 boinc boinc      4096 Jun  2 18:50 shared
[2025-06-02 18:53:34] -rw-r--r--. 2 boinc boinc    508877 Jun  2 18:50 input.tar.gz
[2025-06-02 18:53:34] -rw-r--r--. 1 boinc boinc         0 Jun  2 18:50 boinc_lockfile
[2025-06-02 18:53:34] -rw-r--r--. 1 boinc boinc      2523 Jun  2 18:50 pandaJob.out
[2025-06-02 18:53:34] -rw-------. 1 boinc boinc    988073 Jun  2 18:50 agis_schedconf.cvmfs.json
[2025-06-02 18:53:34] -rw-------. 1 boinc boinc   1603667 Jun  2 18:50 agis_ddmendpoints.agis.ALL.json
[2025-06-02 18:53:34] drwx------. 4 boinc boinc      4096 Jun  2 18:50 pilot3
[2025-06-02 18:53:34] -rw-r--r--. 1 boinc boinc       522 Jun  2 18:51 boinc_task_state.xml
[2025-06-02 18:53:34] -rw-------. 1 boinc boinc       952 Jun  2 18:51 memory_monitor_summary.json
[2025-06-02 18:53:34] -rw-------. 1 boinc boinc     20351 Jun  2 18:51 log.45006595._014469.job.log.tgz.1
[2025-06-02 18:53:34] -rw-------. 1 boinc boinc        95 Jun  2 18:52 pilot_heartbeat.json
[2025-06-02 18:53:34] -rw-------. 1 boinc boinc      8323 Jun  2 18:53 heartbeat.json
[2025-06-02 18:53:34] -rw-r--r--. 1 boinc boinc      8192 Jun  2 18:53 boinc_mmap_file
[2025-06-02 18:53:34] -rw-r--r--. 1 boinc boinc        22 Jun  2 18:53 wrapper_checkpoint.txt
[2025-06-02 18:53:34] -rw-------. 1 boinc boinc      4352 Jun  2 18:53 pilotlog.txt
[2025-06-02 18:53:34] -rw-------. 1 boinc boinc     72744 Jun  2 18:53 log.45006595._014469.job.log.1
[2025-06-02 18:53:34] -rw-------. 1 boinc boinc       188 Jun  2 18:53 output.list
[2025-06-02 18:53:34] -rw-r--r--. 1 boinc boinc       620 Jun  2 18:53 runtime_log
[2025-06-02 18:53:34] -rw-------. 1 boinc boinc    112640 Jun  2 18:53 result.tar.gz
[2025-06-02 18:53:34] -rw-------. 1 boinc boinc       644 Jun  2 18:53 xCiMDmtsTg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAAhKDm0RuCPo.diag
[2025-06-02 18:53:34] -rw-r--r--. 1 boinc boinc      8484 Jun  2 18:53 runtime_log.err
[2025-06-02 18:53:34] -rw-r--r--. 1 boinc boinc     21452 Jun  2 18:53 stderr.txt
[2025-06-02 18:53:34] No HITS result produced
[2025-06-02 18:53:34]  *** Contents of shared directory: ***
[2025-06-02 18:53:34] total 210072
[2025-06-02 18:53:34] -rw-r--r--. 2 boinc boinc 214465981 Jun  2 18:50 ATLAS.root_0
[2025-06-02 18:53:34] -rw-r--r--. 2 boinc boinc     15093 Jun  2 18:50 start_atlas.sh
[2025-06-02 18:53:34] -rw-r--r--. 2 boinc boinc    508877 Jun  2 18:50 input.tar.gz
[2025-06-02 18:53:34] -rw-------. 1 boinc boinc    112640 Jun  2 18:53 result.tar.gz
18:53:35 (4115734): run_atlas exited; CPU time 18.702793
18:53:35 (4115734): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN