Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:20:14 (27930): wrapper (7.7.26015): starting
13:20:14 (27930): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:20:14] Arguments: --nthreads 8
[2025-06-03 13:20:14] Threads: 8
[2025-06-03 13:20:14] Checking for CVMFS
[2025-06-03 13:20:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:20:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:20:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:20:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:20:16] 2.11.2.0 14465 31696 93472 146737 3 60 24992214 25165824 4635 130560 0 16831902 99.811 18715102 1984 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 13:20:16] CVMFS is ok
[2025-06-03 13:20:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:20:16] Checking for apptainer binary...
[2025-06-03 13:20:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:20:16] Running /usr/bin/apptainer --version
[2025-06-03 13:20:16] apptainer version 1.3.2-1.el7
[2025-06-03 13:20:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:20:28] cg-vwn249.simple-grid.lan
[2025-06-03 13:20:28] apptainer works
[2025-06-03 13:20:28] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:20:28] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:20:28] Starting ATLAS job with PandaID=6677393987
[2025-06-03 13:20:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:26:36]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:26:36] 2025-06-03 15:14:00,786 | INFO     | extracted standard info from prmon json
[2025-06-03 17:26:36] 2025-06-03 15:14:00,786 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:26:36] 2025-06-03 15:14:00,787 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:26:36] 2025-06-03 15:14:00,787 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:26:36] 2025-06-03 15:14:00,787 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:26:36] 2025-06-03 15:14:00,792 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:26:36] 2025-06-03 15:14:00,793 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 17:26:36] 2025-06-03 15:14:00,795 | INFO     | sum of deviations: 33327777610.000015
[2025-06-03 17:26:36] 2025-06-03 15:14:00,795 | INFO     | mean x: 1748956913.5
[2025-06-03 17:26:36] 2025-06-03 15:14:00,795 | INFO     | mean y: 2528278.990825688
[2025-06-03 17:26:36] 2025-06-03 15:14:00,796 | INFO     | -- intersect: -18142042489.85662
[2025-06-03 17:26:36] 2025-06-03 15:14:00,796 | INFO     | intersect: -18142042489.85662
[2025-06-03 17:26:36] 2025-06-03 15:14:00,796 | INFO     | chi2: 8.297454714061114
[2025-06-03 17:26:36] 2025-06-03 15:14:00,797 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 17:26:36] 2025-06-03 15:14:00,799 | INFO     | sum of deviations: 49330117449.99999
[2025-06-03 17:26:36] 2025-06-03 15:14:00,799 | INFO     | mean x: 1748956761.0
[2025-06-03 17:26:36] 2025-06-03 15:14:00,799 | INFO     | mean y: 2539387.4460093896
[2025-06-03 17:26:36] 2025-06-03 15:14:00,799 | INFO     | -- intersect: -28790238063.44335
[2025-06-03 17:26:36] 2025-06-03 15:14:00,799 | INFO     | intersect: -28790238063.44335
[2025-06-03 17:26:36] 2025-06-03 15:14:00,800 | INFO     | chi2: 7.593212038715345
[2025-06-03 17:26:36] 2025-06-03 15:14:00,800 | INFO     | current chi2=7.593212038715345 (change=8.487454281038 %)
[2025-06-03 17:26:36] 2025-06-03 15:14:00,800 | INFO     | right removable region: 212
[2025-06-03 17:26:36] 2025-06-03 15:14:00,800 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 17:26:36] 2025-06-03 15:14:00,802 | INFO     | sum of deviations: -45133174404.999985
[2025-06-03 17:26:36] 2025-06-03 15:14:00,802 | INFO     | mean x: 1748957066.0
[2025-06-03 17:26:36] 2025-06-03 15:14:00,802 | INFO     | mean y: 2583627.544600939
[2025-06-03 17:26:36] 2025-06-03 15:14:00,802 | INFO     | -- intersect: 26345713141.345703
[2025-06-03 17:26:36] 2025-06-03 15:14:00,803 | INFO     | intersect: 26345713141.345703
[2025-06-03 17:26:36] 2025-06-03 15:14:00,803 | INFO     | chi2: 3.2122547418419165
[2025-06-03 17:26:36] 2025-06-03 15:14:00,803 | INFO     | current chi2=3.2122547418419165 (change=61.286263649040066 %)
[2025-06-03 17:26:36] 2025-06-03 15:14:00,804 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 17:26:36] 2025-06-03 15:14:00,805 | INFO     | sum of deviations: -94328813481.5
[2025-06-03 17:26:36] 2025-06-03 15:14:00,806 | INFO     | mean x: 1748957218.5
[2025-06-03 17:26:36] 2025-06-03 15:14:00,806 | INFO     | mean y: 2619878.8028846155
[2025-06-03 17:26:36] 2025-06-03 15:14:00,806 | INFO     | -- intersect: 59126804907.55812
[2025-06-03 17:26:36] 2025-06-03 15:14:00,806 | INFO     | intersect: 59126804907.55812
[2025-06-03 17:26:36] 2025-06-03 15:14:00,806 | INFO     | chi2: 1.074969905948693
[2025-06-03 17:26:36] 2025-06-03 15:14:00,806 | INFO     | current chi2=1.074969905948693 (change=66.53534690301983 %)
[2025-06-03 17:26:36] 2025-06-03 15:14:00,807 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 17:26:36] 2025-06-03 15:14:00,809 | INFO     | sum of deviations: -99392102651.99998
[2025-06-03 17:26:36] 2025-06-03 15:14:00,809 | INFO     | mean x: 1748957371.0
[2025-06-03 17:26:36] 2025-06-03 15:14:00,809 | INFO     | mean y: 2623743.6748768473
[2025-06-03 17:26:36] 2025-06-03 15:14:00,809 | INFO     | -- intersect: 67018099275.65674
[2025-06-03 17:26:36] 2025-06-03 15:14:00,809 | INFO     | intersect: 67018099275.65674
[2025-06-03 17:26:36] 2025-06-03 15:14:00,809 | INFO     | chi2: 0.9638155843756022
[2025-06-03 17:26:36] 2025-06-03 15:14:00,810 | INFO     | current chi2=0.9638155843756022 (change=10.340226359638766 %)
[2025-06-03 17:26:36] 2025-06-03 15:14:00,810 | INFO     | left removable region: 30
[2025-06-03 17:26:36] 2025-06-03 15:14:00,810 | INFO     | sum of square deviations: 1869302025.5
[2025-06-03 17:26:36] 2025-06-03 15:14:00,811 | INFO     | sum of deviations: -70886065314.50002
[2025-06-03 17:26:36] 2025-06-03 15:14:00,812 | INFO     | mean x: 1748957645.5
[2025-06-03 17:26:36] 2025-06-03 15:14:00,812 | INFO     | mean y: 2629821.181318681
[2025-06-03 17:26:36] 2025-06-03 15:14:00,812 | INFO     | -- intersect: 66325098956.71116
[2025-06-03 17:26:36] 2025-06-03 15:14:00,812 | INFO     | intersect: 66325098956.71116
[2025-06-03 17:26:36] 2025-06-03 15:14:00,812 | INFO     | chi2: 0.15044168885730894
[2025-06-03 17:26:36] 2025-06-03 15:14:00,812 | INFO     | -- intersect: 66325098956.71116
[2025-06-03 17:26:36] 2025-06-03 15:14:00,813 | INFO     | current memory leak: -37.92 B/s (using 182 data points, chi2=0.15)
[2025-06-03 17:26:36] 2025-06-03 15:14:00,814 | INFO     | ..............................
[2025-06-03 17:26:36] 2025-06-03 15:14:00,814 | INFO     | . Timing measurements:
[2025-06-03 17:26:36] 2025-06-03 15:14:00,814 | INFO     | . get job = 0 s
[2025-06-03 17:26:36] 2025-06-03 15:14:00,814 | INFO     | . initial setup = 6 s
[2025-06-03 17:26:36] 2025-06-03 15:14:00,814 | INFO     | . payload setup = 163 s
[2025-06-03 17:26:36] 2025-06-03 15:14:00,814 | INFO     | . stage-in = 0 s
[2025-06-03 17:26:36] 2025-06-03 15:14:00,814 | INFO     | . payload execution = 13422 s
[2025-06-03 17:26:36] 2025-06-03 15:14:00,814 | INFO     | . stage-out = 1 s
[2025-06-03 17:26:36] 2025-06-03 15:14:00,814 | INFO     | . log creation = 0 s
[2025-06-03 17:26:36] 2025-06-03 15:14:00,814 | INFO     | ..............................
[2025-06-03 17:26:36] 2025-06-03 15:14:01,023 | INFO     | 
[2025-06-03 17:26:36] 2025-06-03 15:14:01,023 | INFO     | job summary report
[2025-06-03 17:26:36] 2025-06-03 15:14:01,023 | INFO     | --------------------------------------------------
[2025-06-03 17:26:36] 2025-06-03 15:14:01,023 | INFO     | PanDA job id: 6677393987
[2025-06-03 17:26:36] 2025-06-03 15:14:01,023 | INFO     | task id: 45006595
[2025-06-03 17:26:36] 2025-06-03 15:14:01,024 | INFO     | errors: (none)
[2025-06-03 17:26:36] 2025-06-03 15:14:01,024 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:26:36] 2025-06-03 15:14:01,024 | INFO     | pilot state: finished 
[2025-06-03 17:26:36] 2025-06-03 15:14:01,024 | INFO     | transexitcode: 0
[2025-06-03 17:26:36] 2025-06-03 15:14:01,024 | INFO     | exeerrorcode: 0
[2025-06-03 17:26:36] 2025-06-03 15:14:01,024 | INFO     | exeerrordiag: 
[2025-06-03 17:26:36] 2025-06-03 15:14:01,024 | INFO     | exitcode: 0
[2025-06-03 17:26:36] 2025-06-03 15:14:01,024 | INFO     | exitmsg: OK
[2025-06-03 17:26:36] 2025-06-03 15:14:01,024 | INFO     | cpuconsumptiontime: 48184 s
[2025-06-03 17:26:36] 2025-06-03 15:14:01,024 | INFO     | nevents: 400
[2025-06-03 17:26:36] 2025-06-03 15:14:01,025 | INFO     | neventsw: 0
[2025-06-03 17:26:36] 2025-06-03 15:14:01,025 | INFO     | pid: 8646
[2025-06-03 17:26:36] 2025-06-03 15:14:01,025 | INFO     | pgrp: 8646
[2025-06-03 17:26:36] 2025-06-03 15:14:01,025 | INFO     | corecount: 8
[2025-06-03 17:26:36] 2025-06-03 15:14:01,025 | INFO     | event service: False
[2025-06-03 17:26:36] 2025-06-03 15:14:01,025 | INFO     | sizes: {0: 2405178, 1: 2405178, 11: 2405206, 22: 2405234, 33: 2405262, 44: 2405318, 54: 2405474, 65: 2405502, 76: 2405530, 85: 2405792, 87: 2405820, 13590: 2435633
[2025-06-03 17:26:36] 2025-06-03 15:14:01,025 | INFO     | --------------------------------------------------
[2025-06-03 17:26:36] 2025-06-03 15:14:01,025 | INFO     | 
[2025-06-03 17:26:36] 2025-06-03 15:14:01,026 | INFO     | executing command: ls -lF /var/lib/boinc/slots/21
[2025-06-03 17:26:36] 2025-06-03 15:14:01,126 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,127 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,127 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,127 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,127 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,127 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,127 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,127 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,127 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,127 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,127 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,128 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,128 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,128 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,128 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,128 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,128 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,128 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:26:36] 2025-06-03 15:14:01,128 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,128 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:26:36] 2025-06-03 15:14:01,128 | INFO     | job 6677393987 has completed (purged errors)
[2025-06-03 17:26:36] 2025-06-03 15:14:01,129 | INFO     | overall cleanup function is called
[2025-06-03 17:26:36] 2025-06-03 15:14:02,138 | INFO     | --- collectZombieJob: --- 10, [8646]
[2025-06-03 17:26:36] 2025-06-03 15:14:02,138 | INFO     | zombie collector waiting for pid 8646
[2025-06-03 17:26:36] 2025-06-03 15:14:02,138 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:26:36] 2025-06-03 15:14:02,138 | INFO     | collected zombie processes
[2025-06-03 17:26:36] 2025-06-03 15:14:02,138 | INFO     | will attempt to kill all subprocesses of pid=8646
[2025-06-03 17:26:36] 2025-06-03 15:14:02,286 | INFO     | process IDs to be killed: [8646] (in reverse order)
[2025-06-03 17:26:36] 2025-06-03 15:14:03,093 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:26:36] 2025-06-03 15:14:03,094 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:26:36] 2025-06-03 15:14:03,097 | INFO     | did not find any defunct processes belonging to 8646
[2025-06-03 17:26:36] 2025-06-03 15:14:03,103 | INFO     | did not find any defunct processes belonging to 8646
[2025-06-03 17:26:36] 2025-06-03 15:14:03,104 | INFO     | ready for new job
[2025-06-03 17:26:36] 2025-06-03 15:14:03,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:26:36] 2025-06-03 15:14:03,106 | INFO     | **************************************
[2025-06-03 17:26:36] 2025-06-03 15:14:03,106 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:26:36] 2025-06-03 15:14:03,106 | INFO     | **************************************
[2025-06-03 17:26:36] 2025-06-03 15:14:03,106 | INFO     | 
[2025-06-03 17:26:36] 2025-06-03 15:14:03,107 | INFO     | pilot is running in a VM
[2025-06-03 17:26:36] 2025-06-03 15:14:03,107 | INFO     | architecture information:
[2025-06-03 17:26:36] 2025-06-03 15:14:03,121 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:26:36] 2025-06-03 15:14:03,398 | INFO     | cat /etc/os-release:
[2025-06-03 17:26:36] NAME="CentOS Linux"
[2025-06-03 17:26:36] VERSION="7 (Core)"
[2025-06-03 17:26:36] ID="centos"
[2025-06-03 17:26:36] ID_LIKE="rhel fedora"
[2025-06-03 17:26:36] VERSION_ID="7"
[2025-06-03 17:26:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:26:36] ANSI_COLOR="0;31"
[2025-06-03 17:26:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:26:36] HOME_URL="https://www.centos.org/"
[2025-06-03 17:26:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:26:36] 
[2025-06-03 17:26:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:26:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:26:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:26:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:26:36] 
[2025-06-03 17:26:36] 2025-06-03 15:14:03,399 | INFO     | **************************************
[2025-06-03 17:26:36] 2025-06-03 15:14:03,902 | INFO     | executing command: df -mP /var/lib/boinc/slots/21
[2025-06-03 17:26:36] 2025-06-03 15:14:04,076 | INFO     | sufficient remaining disk space (496898146304 B)
[2025-06-03 17:26:36] 2025-06-03 15:14:04,076 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:26:36] 2025-06-03 15:14:04,076 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:26:36] 2025-06-03 15:14:04,076 | INFO     | update_server=False
[2025-06-03 17:26:36] 2025-06-03 15:14:04,077 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:26:36] 2025-06-03 15:14:04,077 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:26:36] 2025-06-03 15:14:04,077 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 17:26:36] 2025-06-03 15:14:04,077 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:26:36] 2025-06-03 15:14:04,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:26:36] 2025-06-03 15:14:04,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:26:36] 2025-06-03 15:14:04,078 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:26:36] 2025-06-03 15:14:04,078 | INFO     | aborting loop
[2025-06-03 17:26:36] 2025-06-03 15:14:04,118 | INFO     | all data control threads have been joined
[2025-06-03 17:26:36] 2025-06-03 15:14:04,207 | INFO     | all job control threads have been joined
[2025-06-03 17:26:36] 2025-06-03 15:14:04,683 | INFO     | all payload control threads have been joined
[2025-06-03 17:26:36] 2025-06-03 15:14:05,083 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:26:36] 2025-06-03 15:14:05,084 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:26:36] 2025-06-03 15:14:05,124 | INFO     | [data] control thread has finished
[2025-06-03 17:26:36] 2025-06-03 15:14:05,179 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:26:36] 2025-06-03 15:14:05,213 | INFO     | [job] control thread has finished
[2025-06-03 17:26:36] 2025-06-03 15:14:05,363 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:26:36] 2025-06-03 15:14:05,626 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:26:36] 2025-06-03 15:14:05,641 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:26:36] 2025-06-03 15:14:05,689 | INFO     | [payload] control thread has finished
[2025-06-03 17:26:36] 2025-06-03 15:14:05,743 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:26:36] 2025-06-03 15:14:05,802 | INFO     | [job] validate thread has finished
[2025-06-03 17:26:36] 2025-06-03 15:14:05,968 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:26:36] 2025-06-03 15:14:06,058 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:26:36] 2025-06-03 15:14:06,084 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:26:36] 2025-06-03 15:14:06,168 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:26:36] 2025-06-03 15:14:06,210 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:26:36] 2025-06-03 15:14:06,974 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:26:36] 2025-06-03 15:14:09,372 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:26:36] 2025-06-03 15:14:10,458 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140520211347264)>', '<ExcThread(monitor, started 140519636195072)>']
[2025-06-03 17:26:36] 2025-06-03 15:14:11,120 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:26:36] 2025-06-03 15:14:11,120 | INFO     | [monitor] control thread has ended
[2025-06-03 17:26:36] 2025-06-03 15:14:15,484 | INFO     | all workflow threads have been joined
[2025-06-03 17:26:36] 2025-06-03 15:14:15,484 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:26:36] 2025-06-03 15:14:15,484 | INFO     | traces error code: 0
[2025-06-03 17:26:36] 2025-06-03 15:14:15,485 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:26:36] 2025-06-03 15:14:15,755 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:26:36] 2025-06-03 15:14:15,843 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:26:36] 2025-06-03 15:14:15,926 [wrapper] pilotpid: 2036
[2025-06-03 17:26:36] 2025-06-03 15:14:16,043 [wrapper] Pilot exit status: 0
[2025-06-03 17:26:36] 2025-06-03 15:14:16,502 [wrapper] pandaids: 6677393987
[2025-06-03 17:26:36] 2025-06-03 15:14:17,236 [wrapper] cleanup supervisor_pilot 22249 2037
[2025-06-03 17:26:36] 2025-06-03 15:14:17,305 [wrapper] Test setup, not cleaning
[2025-06-03 17:26:36] 2025-06-03 15:14:17,320 [wrapper] apfmon messages muted
[2025-06-03 17:26:36] 2025-06-03 15:14:17,325 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:26:36] 2025-06-03 15:14:17,390 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:26:36]  *** Error codes and diagnostics ***
[2025-06-03 17:26:36]     "exeErrorCode": 0,
[2025-06-03 17:26:36]     "exeErrorDiag": "",
[2025-06-03 17:26:36]     "pilotErrorCode": 0,
[2025-06-03 17:26:36]     "pilotErrorDiag": "",
[2025-06-03 17:26:36]  *** Listing of results directory ***
[2025-06-03 17:26:36] total 389556
[2025-06-03 17:26:36] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:02 pilot3.tar.gz
[2025-06-03 17:26:36] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:14 queuedata.json
[2025-06-03 17:26:36] -rwx------. 1 boinc boinc     37140 Jun  2 21:14 runpilot2-wrapper.sh
[2025-06-03 17:26:36] -rw-r--r--. 1 boinc boinc       100 Jun  3 13:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:26:36] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 13:20 run_atlas
[2025-06-03 17:26:36] -rw-r--r--. 1 boinc boinc       105 Jun  3 13:20 job.xml
[2025-06-03 17:26:36] -rw-r--r--. 1 boinc boinc      6393 Jun  3 13:20 init_data.xml
[2025-06-03 17:26:36] -rw-r--r--. 2 boinc boinc 212763814 Jun  3 13:20 EVNT.45006593._000357.pool.root.1
[2025-06-03 17:26:36] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:20 start_atlas.sh
[2025-06-03 17:26:36] drwxrwx--x. 2 boinc boinc        68 Jun  3 13:20 shared
[2025-06-03 17:26:36] -rw-r--r--. 2 boinc boinc    508869 Jun  3 13:20 input.tar.gz
[2025-06-03 17:26:36] -rw-r--r--. 1 boinc boinc         0 Jun  3 13:20 boinc_lockfile
[2025-06-03 17:26:36] -rw-r--r--. 1 boinc boinc      2521 Jun  3 13:20 pandaJob.out
[2025-06-03 17:26:36] -rw-------. 1 boinc boinc    985490 Jun  3 13:23 agis_schedconf.cvmfs.json
[2025-06-03 17:26:36] drwx------. 4 boinc boinc      4096 Jun  3 13:23 pilot3
[2025-06-03 17:26:36] -rw-------. 1 boinc boinc 179182888 Jun  3 17:11 HITS.45006595._008915.pool.root.1
[2025-06-03 17:26:36] -rw-r--r--. 1 boinc boinc       531 Jun  3 17:12 boinc_task_state.xml
[2025-06-03 17:26:36] -rw-------. 1 boinc boinc      1021 Jun  3 17:12 memory_monitor_summary.json
[2025-06-03 17:26:36] -rw-------. 1 boinc boinc   1603667 Jun  3 17:12 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:26:36] -rw-------. 1 boinc boinc    382727 Jun  3 17:12 log.45006595._008915.job.log.tgz.1
[2025-06-03 17:26:36] -rw-------. 1 boinc boinc        95 Jun  3 17:13 pilot_heartbeat.json
[2025-06-03 17:26:36] -rw-------. 1 boinc boinc      7707 Jun  3 17:14 heartbeat.json
[2025-06-03 17:26:36] -rw-------. 1 boinc boinc      4540 Jun  3 17:14 pilotlog.txt
[2025-06-03 17:26:36] -rw-------. 1 boinc boinc   1184266 Jun  3 17:14 log.45006595._008915.job.log.1
[2025-06-03 17:26:36] -rw-------. 1 boinc boinc       357 Jun  3 17:14 output.list
[2025-06-03 17:26:36] -rw-r--r--. 1 boinc boinc       620 Jun  3 17:14 runtime_log
[2025-06-03 17:26:36] -rw-------. 1 boinc boinc   1587200 Jun  3 17:14 result.tar.gz
[2025-06-03 17:26:36] -rw-r--r--. 1 boinc boinc      8673 Jun  3 17:14 runtime_log.err
[2025-06-03 17:26:36] -rw-------. 1 boinc boinc       656 Jun  3 17:14 CfRKDm6mPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCFgKDmuEJmQn.diag
[2025-06-03 17:26:36] -rw-r--r--. 1 boinc boinc      8192 Jun  3 17:26 boinc_mmap_file
[2025-06-03 17:26:36] -rw-r--r--. 1 boinc boinc        28 Jun  3 17:26 wrapper_checkpoint.txt
[2025-06-03 17:26:36] -rw-r--r--. 1 boinc boinc     20503 Jun  3 17:26 stderr.txt
[2025-06-03 17:26:36] HITS file was successfully produced:
[2025-06-03 17:26:36] -rw-------. 1 boinc boinc 179182888 Jun  3 17:11 shared/HITS.pool.root.1
[2025-06-03 17:26:36]  *** Contents of shared directory: ***
[2025-06-03 17:26:36] total 384832
[2025-06-03 17:26:36] -rw-r--r--. 2 boinc boinc 212763814 Jun  3 13:20 ATLAS.root_0
[2025-06-03 17:26:36] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:20 start_atlas.sh
[2025-06-03 17:26:36] -rw-r--r--. 2 boinc boinc    508869 Jun  3 13:20 input.tar.gz
[2025-06-03 17:26:36] -rw-------. 1 boinc boinc 179182888 Jun  3 17:11 HITS.pool.root.1
[2025-06-03 17:26:36] -rw-------. 1 boinc boinc   1587200 Jun  3 17:14 result.tar.gz
17:26:38 (27930): run_atlas exited; CPU time 48373.346297
17:26:38 (27930): called boinc_finish(0)

</stderr_txt>
]]>

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