Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:08:02 (15698): wrapper (7.7.26015): starting
13:08:02 (15698): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:08:02] Arguments: --nthreads 8
[2025-06-03 13:08:02] Threads: 8
[2025-06-03 13:08:02] Checking for CVMFS
[2025-06-03 13:08:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:08:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:08:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:08:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:08:04] 2.11.2.0 28641 31703 91736 146737 1 94 15498701 25165824 4099 130560 0 17141191 99.823 18752087 1948 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 13:08:04] CVMFS is ok
[2025-06-03 13:08:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:08:04] Checking for apptainer binary...
[2025-06-03 13:08:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:08:04] Running /usr/bin/apptainer --version
[2025-06-03 13:08:04] apptainer version 1.3.2-1.el7
[2025-06-03 13:08:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:08:14] cg-vwn402.simple-grid.lan
[2025-06-03 13:08:14] apptainer works
[2025-06-03 13:08:14] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:08:14] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:08:14] Starting ATLAS job with PandaID=6677401482
[2025-06-03 13:08:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:04:37]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:04:37] 2025-06-03 15:04:15,297 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:04:37] 2025-06-03 15:04:15,302 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:04:37] 2025-06-03 15:04:15,303 | INFO     | sum of square deviations: 3392567795.5
[2025-06-03 17:04:37] 2025-06-03 15:04:15,304 | INFO     | sum of deviations: 9386273099.500006
[2025-06-03 17:04:37] 2025-06-03 15:04:15,304 | INFO     | mean x: 1748956292.5
[2025-06-03 17:04:37] 2025-06-03 15:04:15,305 | INFO     | mean y: 2555401.671171171
[2025-06-03 17:04:37] 2025-06-03 15:04:15,305 | INFO     | -- intersect: -4836310728.65905
[2025-06-03 17:04:37] 2025-06-03 15:04:15,305 | INFO     | intersect: -4836310728.65905
[2025-06-03 17:04:37] 2025-06-03 15:04:15,305 | INFO     | chi2: 6.908686255849591
[2025-06-03 17:04:37] 2025-06-03 15:04:15,306 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 17:04:37] 2025-06-03 15:04:15,307 | INFO     | sum of deviations: 26610597300.00001
[2025-06-03 17:04:37] 2025-06-03 15:04:15,308 | INFO     | mean x: 1748956140.0
[2025-06-03 17:04:37] 2025-06-03 15:04:15,308 | INFO     | mean y: 2566941.271889401
[2025-06-03 17:04:37] 2025-06-03 15:04:15,308 | INFO     | -- intersect: -14686193185.5893
[2025-06-03 17:04:37] 2025-06-03 15:04:15,308 | INFO     | intersect: -14686193185.5893
[2025-06-03 17:04:37] 2025-06-03 15:04:15,308 | INFO     | chi2: 6.190309598707709
[2025-06-03 17:04:37] 2025-06-03 15:04:15,309 | INFO     | current chi2=6.190309598707709 (change=10.39816588187995 %)
[2025-06-03 17:04:37] 2025-06-03 15:04:15,309 | INFO     | right removable region: 216
[2025-06-03 17:04:37] 2025-06-03 15:04:15,309 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 17:04:37] 2025-06-03 15:04:15,311 | INFO     | sum of deviations: -70818189791.00002
[2025-06-03 17:04:37] 2025-06-03 15:04:15,311 | INFO     | mean x: 1748956445.0
[2025-06-03 17:04:37] 2025-06-03 15:04:15,311 | INFO     | mean y: 2609927.405529954
[2025-06-03 17:04:37] 2025-06-03 15:04:15,311 | INFO     | -- intersect: 39093486848.99228
[2025-06-03 17:04:37] 2025-06-03 15:04:15,311 | INFO     | intersect: 39093486848.99228
[2025-06-03 17:04:37] 2025-06-03 15:04:15,312 | INFO     | chi2: 2.05544184509945
[2025-06-03 17:04:37] 2025-06-03 15:04:15,312 | INFO     | current chi2=2.05544184509945 (change=70.24844132472936 %)
[2025-06-03 17:04:37] 2025-06-03 15:04:15,312 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 17:04:37] 2025-06-03 15:04:15,314 | INFO     | sum of deviations: -102372095636.0
[2025-06-03 17:04:37] 2025-06-03 15:04:15,314 | INFO     | mean x: 1748956597.5
[2025-06-03 17:04:37] 2025-06-03 15:04:15,314 | INFO     | mean y: 2632257.3018867923
[2025-06-03 17:04:37] 2025-06-03 15:04:15,314 | INFO     | -- intersect: 60604258994.6009
[2025-06-03 17:04:37] 2025-06-03 15:04:15,314 | INFO     | intersect: 60604258994.6009
[2025-06-03 17:04:37] 2025-06-03 15:04:15,314 | INFO     | chi2: 1.0072227098218987
[2025-06-03 17:04:37] 2025-06-03 15:04:15,315 | INFO     | current chi2=1.0072227098218987 (change=50.99726551625374 %)
[2025-06-03 17:04:37] 2025-06-03 15:04:15,315 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 17:04:37] 2025-06-03 15:04:15,317 | INFO     | sum of deviations: -102287082497.99997
[2025-06-03 17:04:37] 2025-06-03 15:04:15,317 | INFO     | mean x: 1748956750.0
[2025-06-03 17:04:37] 2025-06-03 15:04:15,317 | INFO     | mean y: 2632164.8309178744
[2025-06-03 17:04:37] 2025-06-03 15:04:15,317 | INFO     | -- intersect: 65048623463.74191
[2025-06-03 17:04:37] 2025-06-03 15:04:15,317 | INFO     | intersect: 65048623463.74191
[2025-06-03 17:04:37] 2025-06-03 15:04:15,317 | INFO     | chi2: 0.9718732548911418
[2025-06-03 17:04:37] 2025-06-03 15:04:15,318 | INFO     | current chi2=0.9718732548911418 (change=3.5095966945589865 %)
[2025-06-03 17:04:37] 2025-06-03 15:04:15,318 | INFO     | left removable region: 30
[2025-06-03 17:04:37] 2025-06-03 15:04:15,318 | INFO     | sum of square deviations: 1995283922.5
[2025-06-03 17:04:37] 2025-06-03 15:04:15,320 | INFO     | sum of deviations: -74546790269.00002
[2025-06-03 17:04:37] 2025-06-03 15:04:15,320 | INFO     | mean x: 1748957024.5
[2025-06-03 17:04:37] 2025-06-03 15:04:15,320 | INFO     | mean y: 2639900.9784946237
[2025-06-03 17:04:37] 2025-06-03 15:04:15,320 | INFO     | -- intersect: 65346289005.080284
[2025-06-03 17:04:37] 2025-06-03 15:04:15,320 | INFO     | intersect: 65346289005.080284
[2025-06-03 17:04:37] 2025-06-03 15:04:15,320 | INFO     | chi2: 0.15721501118835635
[2025-06-03 17:04:37] 2025-06-03 15:04:15,321 | INFO     | -- intersect: 65346289005.080284
[2025-06-03 17:04:37] 2025-06-03 15:04:15,321 | INFO     | current memory leak: -37.36 B/s (using 186 data points, chi2=0.16)
[2025-06-03 17:04:37] 2025-06-03 15:04:15,322 | INFO     | ..............................
[2025-06-03 17:04:37] 2025-06-03 15:04:15,322 | INFO     | . Timing measurements:
[2025-06-03 17:04:37] 2025-06-03 15:04:15,322 | INFO     | . get job = 0 s
[2025-06-03 17:04:37] 2025-06-03 15:04:15,322 | INFO     | . initial setup = 10 s
[2025-06-03 17:04:37] 2025-06-03 15:04:15,322 | INFO     | . payload setup = 143 s
[2025-06-03 17:04:37] 2025-06-03 15:04:15,322 | INFO     | . stage-in = 0 s
[2025-06-03 17:04:37] 2025-06-03 15:04:15,322 | INFO     | . payload execution = 13635 s
[2025-06-03 17:04:37] 2025-06-03 15:04:15,322 | INFO     | . stage-out = 1 s
[2025-06-03 17:04:37] 2025-06-03 15:04:15,322 | INFO     | . log creation = 0 s
[2025-06-03 17:04:37] 2025-06-03 15:04:15,322 | INFO     | ..............................
[2025-06-03 17:04:37] 2025-06-03 15:04:15,449 | INFO     | 
[2025-06-03 17:04:37] 2025-06-03 15:04:15,450 | INFO     | job summary report
[2025-06-03 17:04:37] 2025-06-03 15:04:15,450 | INFO     | --------------------------------------------------
[2025-06-03 17:04:37] 2025-06-03 15:04:15,450 | INFO     | PanDA job id: 6677401482
[2025-06-03 17:04:37] 2025-06-03 15:04:15,450 | INFO     | task id: 45006595
[2025-06-03 17:04:37] 2025-06-03 15:04:15,450 | INFO     | errors: (none)
[2025-06-03 17:04:37] 2025-06-03 15:04:15,450 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:04:37] 2025-06-03 15:04:15,450 | INFO     | pilot state: finished 
[2025-06-03 17:04:37] 2025-06-03 15:04:15,450 | INFO     | transexitcode: 0
[2025-06-03 17:04:37] 2025-06-03 15:04:15,450 | INFO     | exeerrorcode: 0
[2025-06-03 17:04:37] 2025-06-03 15:04:15,451 | INFO     | exeerrordiag: 
[2025-06-03 17:04:37] 2025-06-03 15:04:15,451 | INFO     | exitcode: 0
[2025-06-03 17:04:37] 2025-06-03 15:04:15,451 | INFO     | exitmsg: OK
[2025-06-03 17:04:37] 2025-06-03 15:04:15,451 | INFO     | cpuconsumptiontime: 48431 s
[2025-06-03 17:04:37] 2025-06-03 15:04:15,451 | INFO     | nevents: 400
[2025-06-03 17:04:37] 2025-06-03 15:04:15,451 | INFO     | neventsw: 0
[2025-06-03 17:04:37] 2025-06-03 15:04:15,451 | INFO     | pid: 1827
[2025-06-03 17:04:37] 2025-06-03 15:04:15,451 | INFO     | pgrp: 1827
[2025-06-03 17:04:37] 2025-06-03 15:04:15,451 | INFO     | corecount: 8
[2025-06-03 17:04:37] 2025-06-03 15:04:15,451 | INFO     | event service: False
[2025-06-03 17:04:37] 2025-06-03 15:04:15,451 | INFO     | sizes: {0: 2405011, 1: 2405210, 12: 2405210, 23: 2405238, 33: 2405266, 44: 2405322, 55: 2405478, 66: 2405506, 76: 2405534, 81: 2405796, 87: 2405824, 13784: 2435693
[2025-06-03 17:04:37] 2025-06-03 15:04:15,451 | INFO     | --------------------------------------------------
[2025-06-03 17:04:37] 2025-06-03 15:04:15,451 | INFO     | 
[2025-06-03 17:04:37] 2025-06-03 15:04:15,452 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 17:04:37] 2025-06-03 15:04:15,482 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,482 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,482 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,482 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,483 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,483 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,483 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,483 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,483 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,483 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,483 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,483 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,483 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,483 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,483 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,484 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,484 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,484 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:04:37] 2025-06-03 15:04:15,484 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,484 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:04:37] 2025-06-03 15:04:15,484 | INFO     | job 6677401482 has completed (purged errors)
[2025-06-03 17:04:37] 2025-06-03 15:04:15,484 | INFO     | overall cleanup function is called
[2025-06-03 17:04:37] 2025-06-03 15:04:16,162 | INFO     | PID=21628 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 17:04:37] 2025-06-03 15:04:16,162 | INFO     | .. there are 9 such processes running
[2025-06-03 17:04:37] 2025-06-03 15:04:16,493 | INFO     | --- collectZombieJob: --- 10, [1827]
[2025-06-03 17:04:37] 2025-06-03 15:04:16,493 | INFO     | zombie collector waiting for pid 1827
[2025-06-03 17:04:37] 2025-06-03 15:04:16,493 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:04:37] 2025-06-03 15:04:16,494 | INFO     | collected zombie processes
[2025-06-03 17:04:37] 2025-06-03 15:04:16,494 | INFO     | will attempt to kill all subprocesses of pid=1827
[2025-06-03 17:04:37] 2025-06-03 15:04:16,613 | INFO     | process IDs to be killed: [1827] (in reverse order)
[2025-06-03 17:04:37] 2025-06-03 15:04:16,764 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:04:37] 2025-06-03 15:04:16,764 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:04:37] 2025-06-03 15:04:16,768 | INFO     | did not find any defunct processes belonging to 1827
[2025-06-03 17:04:37] 2025-06-03 15:04:16,771 | INFO     | did not find any defunct processes belonging to 1827
[2025-06-03 17:04:37] 2025-06-03 15:04:16,772 | INFO     | ready for new job
[2025-06-03 17:04:37] 2025-06-03 15:04:16,772 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:04:37] 2025-06-03 15:04:16,774 | INFO     | **************************************
[2025-06-03 17:04:37] 2025-06-03 15:04:16,775 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:04:37] 2025-06-03 15:04:16,775 | INFO     | **************************************
[2025-06-03 17:04:37] 2025-06-03 15:04:16,775 | INFO     | 
[2025-06-03 17:04:37] 2025-06-03 15:04:16,775 | INFO     | pilot is running in a VM
[2025-06-03 17:04:37] 2025-06-03 15:04:16,775 | INFO     | architecture information:
[2025-06-03 17:04:37] 2025-06-03 15:04:16,776 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:04:37] 2025-06-03 15:04:16,816 | INFO     | cat /etc/os-release:
[2025-06-03 17:04:37] NAME="CentOS Linux"
[2025-06-03 17:04:37] VERSION="7 (Core)"
[2025-06-03 17:04:37] ID="centos"
[2025-06-03 17:04:37] ID_LIKE="rhel fedora"
[2025-06-03 17:04:37] VERSION_ID="7"
[2025-06-03 17:04:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:04:37] ANSI_COLOR="0;31"
[2025-06-03 17:04:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:04:37] HOME_URL="https://www.centos.org/"
[2025-06-03 17:04:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:04:37] 
[2025-06-03 17:04:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:04:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:04:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:04:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:04:37] 
[2025-06-03 17:04:37] 2025-06-03 15:04:16,817 | INFO     | **************************************
[2025-06-03 17:04:37] 2025-06-03 15:04:17,319 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 17:04:37] 2025-06-03 15:04:17,353 | INFO     | sufficient remaining disk space (496999858176 B)
[2025-06-03 17:04:37] 2025-06-03 15:04:17,354 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:04:37] 2025-06-03 15:04:17,354 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:04:37] 2025-06-03 15:04:17,354 | INFO     | update_server=False
[2025-06-03 17:04:37] 2025-06-03 15:04:17,354 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:04:37] 2025-06-03 15:04:17,355 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:04:37] 2025-06-03 15:04:17,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:04:37] 2025-06-03 15:04:17,355 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:04:37] 2025-06-03 15:04:17,696 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 17:04:37] 2025-06-03 15:04:17,696 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 17:04:37] 2025-06-03 15:04:17,696 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:04:37] 2025-06-03 15:04:17,697 | INFO     | will abort loop
[2025-06-03 17:04:37] 2025-06-03 15:04:18,081 | INFO     | all data control threads have been joined
[2025-06-03 17:04:37] 2025-06-03 15:04:18,157 | INFO     | all payload control threads have been joined
[2025-06-03 17:04:37] 2025-06-03 15:04:18,158 | INFO     | all job control threads have been joined
[2025-06-03 17:04:37] 2025-06-03 15:04:18,171 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:04:37] 2025-06-03 15:04:18,171 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:04:37] 2025-06-03 15:04:18,171 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:04:37] 2025-06-03 15:04:18,360 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:04:37] 2025-06-03 15:04:18,360 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:04:37] 2025-06-03 15:04:18,702 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:04:37] 2025-06-03 15:04:18,842 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:04:37] 2025-06-03 15:04:18,843 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:04:37] 2025-06-03 15:04:18,857 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:04:37] 2025-06-03 15:04:19,087 | INFO     | [data] control thread has finished
[2025-06-03 17:04:37] 2025-06-03 15:04:19,163 | INFO     | [payload] control thread has finished
[2025-06-03 17:04:37] 2025-06-03 15:04:19,163 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:04:37] 2025-06-03 15:04:19,164 | INFO     | [job] control thread has finished
[2025-06-03 17:04:37] 2025-06-03 15:04:19,263 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:04:37] 2025-06-03 15:04:19,387 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:04:37] 2025-06-03 15:04:20,163 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:04:37] 2025-06-03 15:04:20,164 | INFO     | [job] validate thread has finished
[2025-06-03 17:04:37] 2025-06-03 15:04:21,370 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:04:37] 2025-06-03 15:04:28,122 | INFO     | job.realtimelogging is not enabled
[2025-06-03 17:04:37] 2025-06-03 15:04:29,129 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:04:37] 2025-06-03 15:04:30,964 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139787906615104)>', '<ExcThread(monitor, started 139787444918016)>']
[2025-06-03 17:04:37] 2025-06-03 15:04:31,248 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:04:37] 2025-06-03 15:04:31,248 | INFO     | [monitor] control thread has ended
[2025-06-03 17:04:37] 2025-06-03 15:04:35,990 | INFO     | all workflow threads have been joined
[2025-06-03 17:04:37] 2025-06-03 15:04:35,990 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:04:37] 2025-06-03 15:04:35,991 | INFO     | traces error code: 0
[2025-06-03 17:04:37] 2025-06-03 15:04:35,991 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:04:37] 2025-06-03 15:04:36,233 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:04:37] 2025-06-03 15:04:36,253 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:04:37] 2025-06-03 15:04:36,262 [wrapper] pilotpid: 21628
[2025-06-03 17:04:37] 2025-06-03 15:04:36,285 [wrapper] Pilot exit status: 0
[2025-06-03 17:04:37] 2025-06-03 15:04:36,343 [wrapper] pandaids: 6677401482
[2025-06-03 17:04:37] 2025-06-03 15:04:36,398 [wrapper] cleanup supervisor_pilot 23402 21629
[2025-06-03 17:04:37] 2025-06-03 15:04:36,445 [wrapper] Test setup, not cleaning
[2025-06-03 17:04:37] 2025-06-03 15:04:36,504 [wrapper] apfmon messages muted
[2025-06-03 17:04:37] 2025-06-03 15:04:36,539 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:04:37] 2025-06-03 15:04:36,562 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:04:37]  *** Error codes and diagnostics ***
[2025-06-03 17:04:37]     "exeErrorCode": 0,
[2025-06-03 17:04:37]     "exeErrorDiag": "",
[2025-06-03 17:04:37]     "pilotErrorCode": 0,
[2025-06-03 17:04:37]     "pilotErrorDiag": "",
[2025-06-03 17:04:37]  *** Listing of results directory ***
[2025-06-03 17:04:37] total 383000
[2025-06-03 17:04:37] -rw-r--r--. 1 boinc boinc    495897 Jun  2 23:10 pilot3.tar.gz
[2025-06-03 17:04:37] -rw-r--r--. 1 boinc boinc      5111 Jun  2 23:15 queuedata.json
[2025-06-03 17:04:37] -rwx------. 1 boinc boinc     37140 Jun  2 23:18 runpilot2-wrapper.sh
[2025-06-03 17:04:37] -rw-r--r--. 1 boinc boinc       100 Jun  3 13:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:04:37] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 13:08 run_atlas
[2025-06-03 17:04:37] -rw-r--r--. 1 boinc boinc       105 Jun  3 13:08 job.xml
[2025-06-03 17:04:37] -rw-r--r--. 1 boinc boinc      6390 Jun  3 13:08 init_data.xml
[2025-06-03 17:04:37] -rw-r--r--. 2 boinc boinc 214476443 Jun  3 13:08 EVNT.45006593._000486.pool.root.1
[2025-06-03 17:04:37] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:08 start_atlas.sh
[2025-06-03 17:04:37] drwxrwx--x. 2 boinc boinc        68 Jun  3 13:08 shared
[2025-06-03 17:04:37] -rw-r--r--. 2 boinc boinc    508877 Jun  3 13:08 input.tar.gz
[2025-06-03 17:04:37] -rw-r--r--. 1 boinc boinc         0 Jun  3 13:08 boinc_lockfile
[2025-06-03 17:04:37] -rw-r--r--. 1 boinc boinc      2524 Jun  3 13:08 pandaJob.out
[2025-06-03 17:04:37] -rw-------. 1 boinc boinc    985490 Jun  3 13:11 agis_schedconf.cvmfs.json
[2025-06-03 17:04:37] drwx------. 4 boinc boinc      4096 Jun  3 13:11 pilot3
[2025-06-03 17:04:37] -rw-------. 1 boinc boinc 170738504 Jun  3 17:03 HITS.45006595._012136.pool.root.1
[2025-06-03 17:04:37] -rw-r--r--. 1 boinc boinc       531 Jun  3 17:03 boinc_task_state.xml
[2025-06-03 17:04:37] -rw-------. 1 boinc boinc        95 Jun  3 17:03 pilot_heartbeat.json
[2025-06-03 17:04:37] -rw-------. 1 boinc boinc      1018 Jun  3 17:03 memory_monitor_summary.json
[2025-06-03 17:04:37] -rw-------. 1 boinc boinc   1603667 Jun  3 17:04 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:04:37] -rw-------. 1 boinc boinc    379723 Jun  3 17:04 log.45006595._012136.job.log.tgz.1
[2025-06-03 17:04:37] -rw-------. 1 boinc boinc      7695 Jun  3 17:04 heartbeat.json
[2025-06-03 17:04:37] -rw-r--r--. 1 boinc boinc        28 Jun  3 17:04 wrapper_checkpoint.txt
[2025-06-03 17:04:37] -rw-r--r--. 1 boinc boinc      8192 Jun  3 17:04 boinc_mmap_file
[2025-06-03 17:04:37] -rw-------. 1 boinc boinc      4674 Jun  3 17:04 pilotlog.txt
[2025-06-03 17:04:37] -rw-------. 1 boinc boinc   1196075 Jun  3 17:04 log.45006595._012136.job.log.1
[2025-06-03 17:04:37] -rw-------. 1 boinc boinc       357 Jun  3 17:04 output.list
[2025-06-03 17:04:37] -rw-r--r--. 1 boinc boinc       620 Jun  3 17:04 runtime_log
[2025-06-03 17:04:37] -rw-------. 1 boinc boinc   1597440 Jun  3 17:04 result.tar.gz
[2025-06-03 17:04:37] -rw-r--r--. 1 boinc boinc      8659 Jun  3 17:04 runtime_log.err
[2025-06-03 17:04:37] -rw-------. 1 boinc boinc       656 Jun  3 17:04 hd6LDmTjRg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUlgKDmuSoiym.diag
[2025-06-03 17:04:37] -rw-r--r--. 1 boinc boinc     20590 Jun  3 17:04 stderr.txt
[2025-06-03 17:04:37] HITS file was successfully produced:
[2025-06-03 17:04:37] -rw-------. 1 boinc boinc 170738504 Jun  3 17:03 shared/HITS.pool.root.1
[2025-06-03 17:04:37]  *** Contents of shared directory: ***
[2025-06-03 17:04:37] total 378268
[2025-06-03 17:04:37] -rw-r--r--. 2 boinc boinc 214476443 Jun  3 13:08 ATLAS.root_0
[2025-06-03 17:04:37] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:08 start_atlas.sh
[2025-06-03 17:04:37] -rw-r--r--. 2 boinc boinc    508877 Jun  3 13:08 input.tar.gz
[2025-06-03 17:04:37] -rw-------. 1 boinc boinc 170738504 Jun  3 17:03 HITS.pool.root.1
[2025-06-03 17:04:37] -rw-------. 1 boinc boinc   1597440 Jun  3 17:04 result.tar.gz
17:04:38 (15698): run_atlas exited; CPU time 48617.054701
17:04:38 (15698): called boinc_finish(0)

</stderr_txt>
]]>

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