Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:11:16 (1136): wrapper (7.7.26015): starting
11:11:16 (1136): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:11:16] Arguments: --nthreads 8
[2025-06-03 11:11:16] Threads: 8
[2025-06-03 11:11:16] Checking for CVMFS
[2025-06-03 11:11:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:11:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:11:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:11:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:11:19] 2.11.2.0 16647 31737 99412 146735 3 188 15814183 25165824 3818 130560 0 16664298 99.741 20097297 5036 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 11:11:19] CVMFS is ok
[2025-06-03 11:11:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:11:19] Checking for apptainer binary...
[2025-06-03 11:11:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:11:19] Running /usr/bin/apptainer --version
[2025-06-03 11:11:19] apptainer version 1.3.2-1.el7
[2025-06-03 11:11:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:11:21] cg-vwn490.simple-grid.lan
[2025-06-03 11:11:21] apptainer works
[2025-06-03 11:11:21] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:11:21] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:11:21] Starting ATLAS job with PandaID=6677400920
[2025-06-03 11:11:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:48:46]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:48:46] 2025-06-03 12:39:25,376 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:48:46] 2025-06-03 12:39:25,377 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:48:46] 2025-06-03 12:39:25,377 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:48:46] 2025-06-03 12:39:25,381 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:48:46] 2025-06-03 12:39:25,381 | INFO     | sum of square deviations: 2555770710.5
[2025-06-03 14:48:46] 2025-06-03 12:39:25,383 | INFO     | sum of deviations: -10986040646.999992
[2025-06-03 14:48:46] 2025-06-03 12:39:25,383 | INFO     | mean x: 1748948113.5
[2025-06-03 14:48:46] 2025-06-03 12:39:25,383 | INFO     | mean y: 2491706.2673267326
[2025-06-03 14:48:46] 2025-06-03 12:39:25,383 | INFO     | -- intersect: 7520386400.602409
[2025-06-03 14:48:46] 2025-06-03 12:39:25,383 | INFO     | intersect: 7520386400.602409
[2025-06-03 14:48:46] 2025-06-03 12:39:25,383 | INFO     | chi2: 2.4055422526959087
[2025-06-03 14:48:46] 2025-06-03 12:39:25,384 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 14:48:46] 2025-06-03 12:39:25,385 | INFO     | sum of deviations: 2604829136.9999948
[2025-06-03 14:48:46] 2025-06-03 12:39:25,385 | INFO     | mean x: 1748947961.0
[2025-06-03 14:48:46] 2025-06-03 12:39:25,386 | INFO     | mean y: 2502681.5989847714
[2025-06-03 14:48:46] 2025-06-03 12:39:25,386 | INFO     | -- intersect: -1919217791.2256477
[2025-06-03 14:48:46] 2025-06-03 12:39:25,386 | INFO     | intersect: -1919217791.2256477
[2025-06-03 14:48:46] 2025-06-03 12:39:25,386 | INFO     | chi2: 1.6383077053399362
[2025-06-03 14:48:46] 2025-06-03 12:39:25,386 | INFO     | current chi2=1.6383077053399362 (change=31.89445317354651 %)
[2025-06-03 14:48:46] 2025-06-03 12:39:25,386 | INFO     | sum of square deviations: 2194675568.0
[2025-06-03 14:48:46] 2025-06-03 12:39:25,388 | INFO     | sum of deviations: 2633026173.5
[2025-06-03 14:48:46] 2025-06-03 12:39:25,388 | INFO     | mean x: 1748947808.5
[2025-06-03 14:48:46] 2025-06-03 12:39:25,388 | INFO     | mean y: 2502706.046875
[2025-06-03 14:48:46] 2025-06-03 12:39:25,388 | INFO     | -- intersect: -2095768866.7589903
[2025-06-03 14:48:46] 2025-06-03 12:39:25,388 | INFO     | intersect: -2095768866.7589903
[2025-06-03 14:48:46] 2025-06-03 12:39:25,388 | INFO     | chi2: 1.6387528132570475
[2025-06-03 14:48:46] 2025-06-03 12:39:25,389 | INFO     | current chi2=1.6387528132570475 (change=-0.02716876174484692 %)
[2025-06-03 14:48:46] 2025-06-03 12:39:25,389 | INFO     | right removable region: 191
[2025-06-03 14:48:46] 2025-06-03 12:39:25,389 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 14:48:46] 2025-06-03 12:39:25,390 | INFO     | sum of deviations: -41860917184.0
[2025-06-03 14:48:46] 2025-06-03 12:39:25,390 | INFO     | mean x: 1748948266.0
[2025-06-03 14:48:46] 2025-06-03 12:39:25,391 | INFO     | mean y: 2516859.8730964465
[2025-06-03 14:48:46] 2025-06-03 12:39:25,391 | INFO     | -- intersect: 30885538878.431755
[2025-06-03 14:48:46] 2025-06-03 12:39:25,391 | INFO     | intersect: 30885538878.431755
[2025-06-03 14:48:46] 2025-06-03 12:39:25,391 | INFO     | chi2: 0.9454296872613753
[2025-06-03 14:48:46] 2025-06-03 12:39:25,391 | INFO     | current chi2=0.9454296872613753 (change=60.69785570376802 %)
[2025-06-03 14:48:46] 2025-06-03 12:39:25,392 | INFO     | sum of square deviations: 2194675568.0
[2025-06-03 14:48:46] 2025-06-03 12:39:25,393 | INFO     | sum of deviations: -37926970393.0
[2025-06-03 14:48:46] 2025-06-03 12:39:25,393 | INFO     | mean x: 1748948418.5
[2025-06-03 14:48:46] 2025-06-03 12:39:25,393 | INFO     | mean y: 2513415.71875
[2025-06-03 14:48:46] 2025-06-03 12:39:25,393 | INFO     | -- intersect: 30226714137.915733
[2025-06-03 14:48:46] 2025-06-03 12:39:25,393 | INFO     | intersect: 30226714137.915733
[2025-06-03 14:48:46] 2025-06-03 12:39:25,393 | INFO     | chi2: 0.9336689998057923
[2025-06-03 14:48:46] 2025-06-03 12:39:25,394 | INFO     | current chi2=0.9336689998057923 (change=1.2439515718667744 %)
[2025-06-03 14:48:46] 2025-06-03 12:39:25,394 | INFO     | left removable region: 20
[2025-06-03 14:48:46] 2025-06-03 12:39:25,394 | INFO     | sum of square deviations: 1550429070.0
[2025-06-03 14:48:46] 2025-06-03 12:39:25,395 | INFO     | sum of deviations: -11222645800.0
[2025-06-03 14:48:46] 2025-06-03 12:39:25,395 | INFO     | mean x: 1748948388.0
[2025-06-03 14:48:46] 2025-06-03 12:39:25,395 | INFO     | mean y: 2513273.98245614
[2025-06-03 14:48:46] 2025-06-03 12:39:25,395 | INFO     | -- intersect: 12662123868.74831
[2025-06-03 14:48:46] 2025-06-03 12:39:25,395 | INFO     | intersect: 12662123868.74831
[2025-06-03 14:48:46] 2025-06-03 12:39:25,396 | INFO     | chi2: 0.09459519803476757
[2025-06-03 14:48:46] 2025-06-03 12:39:25,396 | INFO     | -- intersect: 12662123868.74831
[2025-06-03 14:48:46] 2025-06-03 12:39:25,396 | INFO     | current memory leak: -7.24 B/s (using 171 data points, chi2=0.09)
[2025-06-03 14:48:46] 2025-06-03 12:39:25,397 | INFO     | ..............................
[2025-06-03 14:48:46] 2025-06-03 12:39:25,397 | INFO     | . Timing measurements:
[2025-06-03 14:48:46] 2025-06-03 12:39:25,397 | INFO     | . get job = 0 s
[2025-06-03 14:48:46] 2025-06-03 12:39:25,397 | INFO     | . initial setup = 2 s
[2025-06-03 14:48:46] 2025-06-03 12:39:25,397 | INFO     | . payload setup = 21 s
[2025-06-03 14:48:46] 2025-06-03 12:39:25,397 | INFO     | . stage-in = 0 s
[2025-06-03 14:48:46] 2025-06-03 12:39:25,397 | INFO     | . payload execution = 12325 s
[2025-06-03 14:48:46] 2025-06-03 12:39:25,397 | INFO     | . stage-out = 3 s
[2025-06-03 14:48:46] 2025-06-03 12:39:25,397 | INFO     | . log creation = 0 s
[2025-06-03 14:48:46] 2025-06-03 12:39:25,397 | INFO     | ..............................
[2025-06-03 14:48:46] 2025-06-03 12:39:25,537 | INFO     | 
[2025-06-03 14:48:46] 2025-06-03 12:39:25,537 | INFO     | job summary report
[2025-06-03 14:48:46] 2025-06-03 12:39:25,538 | INFO     | --------------------------------------------------
[2025-06-03 14:48:46] 2025-06-03 12:39:25,538 | INFO     | PanDA job id: 6677400920
[2025-06-03 14:48:46] 2025-06-03 12:39:25,538 | INFO     | task id: 45006595
[2025-06-03 14:48:46] 2025-06-03 12:39:25,538 | INFO     | errors: (none)
[2025-06-03 14:48:46] 2025-06-03 12:39:25,538 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:48:46] 2025-06-03 12:39:25,538 | INFO     | pilot state: finished 
[2025-06-03 14:48:46] 2025-06-03 12:39:25,538 | INFO     | transexitcode: 0
[2025-06-03 14:48:46] 2025-06-03 12:39:25,538 | INFO     | exeerrorcode: 0
[2025-06-03 14:48:46] 2025-06-03 12:39:25,538 | INFO     | exeerrordiag: 
[2025-06-03 14:48:46] 2025-06-03 12:39:25,538 | INFO     | exitcode: 0
[2025-06-03 14:48:46] 2025-06-03 12:39:25,538 | INFO     | exitmsg: OK
[2025-06-03 14:48:46] 2025-06-03 12:39:25,538 | INFO     | cpuconsumptiontime: 45532 s
[2025-06-03 14:48:46] 2025-06-03 12:39:25,539 | INFO     | nevents: 400
[2025-06-03 14:48:46] 2025-06-03 12:39:25,539 | INFO     | neventsw: 0
[2025-06-03 14:48:46] 2025-06-03 12:39:25,539 | INFO     | pid: 13416
[2025-06-03 14:48:46] 2025-06-03 12:39:25,539 | INFO     | pgrp: 13416
[2025-06-03 14:48:46] 2025-06-03 12:39:25,539 | INFO     | corecount: 8
[2025-06-03 14:48:46] 2025-06-03 12:39:25,539 | INFO     | event service: False
[2025-06-03 14:48:46] 2025-06-03 12:39:25,539 | INFO     | sizes: {0: 2404960, 1: 2405159, 12: 2405393, 12350: 2434372, 12351: 2434371, 12354: 2443368, 12355: 2443552, 12435: 2443722}
[2025-06-03 14:48:46] 2025-06-03 12:39:25,539 | INFO     | --------------------------------------------------
[2025-06-03 14:48:46] 2025-06-03 12:39:25,539 | INFO     | 
[2025-06-03 14:48:46] 2025-06-03 12:39:25,539 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-03 14:48:46] 2025-06-03 12:39:26,124 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,124 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,124 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,124 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,124 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,125 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,125 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,125 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,125 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,125 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,125 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,125 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,125 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,125 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,125 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,125 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,126 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:48:46] 2025-06-03 12:39:26,126 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,126 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:48:46] 2025-06-03 12:39:26,126 | INFO     | job 6677400920 has completed (purged errors)
[2025-06-03 14:48:46] 2025-06-03 12:39:26,126 | INFO     | overall cleanup function is called
[2025-06-03 14:48:46] 2025-06-03 12:39:27,135 | INFO     | --- collectZombieJob: --- 10, [13416]
[2025-06-03 14:48:46] 2025-06-03 12:39:27,135 | INFO     | zombie collector waiting for pid 13416
[2025-06-03 14:48:46] 2025-06-03 12:39:27,136 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:48:46] 2025-06-03 12:39:27,136 | INFO     | collected zombie processes
[2025-06-03 14:48:46] 2025-06-03 12:39:27,136 | INFO     | will attempt to kill all subprocesses of pid=13416
[2025-06-03 14:48:46] 2025-06-03 12:39:27,221 | INFO     | process IDs to be killed: [13416] (in reverse order)
[2025-06-03 14:48:46] 2025-06-03 12:39:27,889 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:48:46] 2025-06-03 12:39:27,889 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:48:46] 2025-06-03 12:39:27,897 | INFO     | did not find any defunct processes belonging to 13416
[2025-06-03 14:48:46] 2025-06-03 12:39:27,899 | INFO     | did not find any defunct processes belonging to 13416
[2025-06-03 14:48:46] 2025-06-03 12:39:27,900 | INFO     | ready for new job
[2025-06-03 14:48:46] 2025-06-03 12:39:27,900 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:48:46] 2025-06-03 12:39:27,901 | INFO     | **************************************
[2025-06-03 14:48:46] 2025-06-03 12:39:27,902 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:48:46] 2025-06-03 12:39:27,902 | INFO     | **************************************
[2025-06-03 14:48:46] 2025-06-03 12:39:27,902 | INFO     | 
[2025-06-03 14:48:46] 2025-06-03 12:39:27,908 | INFO     | pilot is running in a VM
[2025-06-03 14:48:46] 2025-06-03 12:39:27,909 | INFO     | architecture information:
[2025-06-03 14:48:46] 2025-06-03 12:39:27,925 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:48:46] 2025-06-03 12:39:28,165 | INFO     | cat /etc/os-release:
[2025-06-03 14:48:46] NAME="CentOS Linux"
[2025-06-03 14:48:46] VERSION="7 (Core)"
[2025-06-03 14:48:46] ID="centos"
[2025-06-03 14:48:46] ID_LIKE="rhel fedora"
[2025-06-03 14:48:46] VERSION_ID="7"
[2025-06-03 14:48:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:48:46] ANSI_COLOR="0;31"
[2025-06-03 14:48:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:48:46] HOME_URL="https://www.centos.org/"
[2025-06-03 14:48:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:48:46] 
[2025-06-03 14:48:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:48:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:48:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:48:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:48:46] 
[2025-06-03 14:48:46] 2025-06-03 12:39:28,165 | INFO     | **************************************
[2025-06-03 14:48:46] 2025-06-03 12:39:28,668 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-03 14:48:46] 2025-06-03 12:39:28,923 | INFO     | sufficient remaining disk space (497082695680 B)
[2025-06-03 14:48:46] 2025-06-03 12:39:28,924 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:48:46] 2025-06-03 12:39:28,924 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:48:46] 2025-06-03 12:39:28,924 | INFO     | update_server=False
[2025-06-03 14:48:46] 2025-06-03 12:39:28,924 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:48:46] 2025-06-03 12:39:28,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:48:46] 2025-06-03 12:39:28,926 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:48:46] 2025-06-03 12:39:28,928 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 14:48:46] 2025-06-03 12:39:28,929 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:48:46] 2025-06-03 12:39:28,929 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:48:46] 2025-06-03 12:39:28,929 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:48:46] 2025-06-03 12:39:29,080 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 14:48:46] 2025-06-03 12:39:29,081 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 14:48:46] 2025-06-03 12:39:29,081 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:48:46] 2025-06-03 12:39:29,081 | INFO     | will abort loop
[2025-06-03 14:48:46] 2025-06-03 12:39:29,316 | INFO     | all payload control threads have been joined
[2025-06-03 14:48:46] 2025-06-03 12:39:29,632 | INFO     | all data control threads have been joined
[2025-06-03 14:48:46] 2025-06-03 12:39:29,930 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:48:46] 2025-06-03 12:39:29,957 | INFO     | all job control threads have been joined
[2025-06-03 14:48:46] 2025-06-03 12:39:30,015 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:48:46] 2025-06-03 12:39:30,086 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:48:46] 2025-06-03 12:39:30,122 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:48:46] 2025-06-03 12:39:30,202 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:48:46] 2025-06-03 12:39:30,322 | INFO     | [payload] control thread has finished
[2025-06-03 14:48:46] 2025-06-03 12:39:30,419 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:48:46] 2025-06-03 12:39:30,554 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:48:46] 2025-06-03 12:39:30,619 | INFO     | [job] validate thread has finished
[2025-06-03 14:48:46] 2025-06-03 12:39:30,638 | INFO     | [data] control thread has finished
[2025-06-03 14:48:46] 2025-06-03 12:39:30,752 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:48:46] 2025-06-03 12:39:30,791 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:48:46] 2025-06-03 12:39:30,858 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:48:46] 2025-06-03 12:39:30,933 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:48:46] 2025-06-03 12:39:30,963 | INFO     | [job] control thread has finished
[2025-06-03 14:48:46] 2025-06-03 12:39:31,560 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:48:46] 2025-06-03 12:39:32,934 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:48:46] 2025-06-03 12:39:33,728 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140488801818432)>', '<ExcThread(monitor, started 140488371857152)>']
[2025-06-03 14:48:46] 2025-06-03 12:39:33,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:48:46] 2025-06-03 12:39:33,959 | INFO     | [monitor] control thread has ended
[2025-06-03 14:48:46] 2025-06-03 12:39:38,754 | INFO     | all workflow threads have been joined
[2025-06-03 14:48:46] 2025-06-03 12:39:38,754 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:48:46] 2025-06-03 12:39:38,755 | INFO     | traces error code: 0
[2025-06-03 14:48:46] 2025-06-03 12:39:38,755 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:48:46] 2025-06-03 12:39:38,981 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:48:46] 2025-06-03 12:39:38,988 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:48:46] 2025-06-03 12:39:38,994 [wrapper] pilotpid: 4846
[2025-06-03 14:48:46] 2025-06-03 12:39:39,026 [wrapper] Pilot exit status: 0
[2025-06-03 14:48:46] 2025-06-03 12:39:39,147 [wrapper] pandaids: 6677400920
[2025-06-03 14:48:46] 2025-06-03 12:39:39,288 [wrapper] cleanup supervisor_pilot 26051 4847
[2025-06-03 14:48:46] 2025-06-03 12:39:39,383 [wrapper] Test setup, not cleaning
[2025-06-03 14:48:46] 2025-06-03 12:39:39,403 [wrapper] apfmon messages muted
[2025-06-03 14:48:46] 2025-06-03 12:39:39,451 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:48:46] 2025-06-03 12:39:39,588 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:48:46]  *** Error codes and diagnostics ***
[2025-06-03 14:48:46]     "exeErrorCode": 0,
[2025-06-03 14:48:46]     "exeErrorDiag": "",
[2025-06-03 14:48:46]     "pilotErrorCode": 0,
[2025-06-03 14:48:46]     "pilotErrorDiag": "",
[2025-06-03 14:48:46]  *** Listing of results directory ***
[2025-06-03 14:48:46] total 392780
[2025-06-03 14:48:46] -rw-r--r--. 1 boinc boinc    495897 Jun  2 22:47 pilot3.tar.gz
[2025-06-03 14:48:46] -rw-r--r--. 1 boinc boinc      5111 Jun  2 23:00 queuedata.json
[2025-06-03 14:48:46] -rwx------. 1 boinc boinc     37140 Jun  2 23:03 runpilot2-wrapper.sh
[2025-06-03 14:48:46] -rw-r--r--. 1 boinc boinc       100 Jun  3 11:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:48:46] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 11:11 run_atlas
[2025-06-03 14:48:46] -rw-r--r--. 1 boinc boinc       105 Jun  3 11:11 job.xml
[2025-06-03 14:48:46] -rw-r--r--. 1 boinc boinc      6392 Jun  3 11:11 init_data.xml
[2025-06-03 14:48:46] -rw-r--r--. 2 boinc boinc 214034304 Jun  3 11:11 EVNT.45006593._000474.pool.root.1
[2025-06-03 14:48:46] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:11 start_atlas.sh
[2025-06-03 14:48:46] drwxrwx--x. 2 boinc boinc        68 Jun  3 11:11 shared
[2025-06-03 14:48:46] -rw-r--r--. 2 boinc boinc    508881 Jun  3 11:11 input.tar.gz
[2025-06-03 14:48:46] -rw-r--r--. 1 boinc boinc         0 Jun  3 11:11 boinc_lockfile
[2025-06-03 14:48:46] -rw-r--r--. 1 boinc boinc      2523 Jun  3 11:11 pandaJob.out
[2025-06-03 14:48:46] -rw-------. 1 boinc boinc    985498 Jun  3 11:11 agis_schedconf.cvmfs.json
[2025-06-03 14:48:46] drwx------. 4 boinc boinc      4096 Jun  3 11:11 pilot3
[2025-06-03 14:48:46] -rw-------. 1 boinc boinc 181446246 Jun  3 14:37 HITS.45006595._011837.pool.root.1
[2025-06-03 14:48:46] -rw-r--r--. 1 boinc boinc       531 Jun  3 14:37 boinc_task_state.xml
[2025-06-03 14:48:46] -rw-------. 1 boinc boinc      1015 Jun  3 14:37 memory_monitor_summary.json
[2025-06-03 14:48:46] -rw-------. 1 boinc boinc   1603667 Jun  3 14:38 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:48:46] -rw-------. 1 boinc boinc    368285 Jun  3 14:38 log.45006595._011837.job.log.tgz.1
[2025-06-03 14:48:46] -rw-------. 1 boinc boinc        95 Jun  3 14:38 pilot_heartbeat.json
[2025-06-03 14:48:46] -rw-------. 1 boinc boinc      7682 Jun  3 14:39 heartbeat.json
[2025-06-03 14:48:46] -rw-------. 1 boinc boinc      4725 Jun  3 14:39 pilotlog.txt
[2025-06-03 14:48:46] -rw-------. 1 boinc boinc   1082913 Jun  3 14:39 log.45006595._011837.job.log.1
[2025-06-03 14:48:46] -rw-------. 1 boinc boinc       357 Jun  3 14:39 output.list
[2025-06-03 14:48:46] -rw-r--r--. 1 boinc boinc       620 Jun  3 14:39 runtime_log
[2025-06-03 14:48:46] -rw-------. 1 boinc boinc   1474560 Jun  3 14:39 result.tar.gz
[2025-06-03 14:48:46] -rw-r--r--. 1 boinc boinc      8659 Jun  3 14:39 runtime_log.err
[2025-06-03 14:48:46] -rw-------. 1 boinc boinc       656 Jun  3 14:39 CQYNDmCVRg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmedWKDmxHGLBn.diag
[2025-06-03 14:48:46] -rw-r--r--. 1 boinc boinc      8192 Jun  3 14:48 boinc_mmap_file
[2025-06-03 14:48:46] -rw-r--r--. 1 boinc boinc        28 Jun  3 14:48 wrapper_checkpoint.txt
[2025-06-03 14:48:46] -rw-r--r--. 1 boinc boinc     20484 Jun  3 14:48 stderr.txt
[2025-06-03 14:48:46] HITS file was successfully produced:
[2025-06-03 14:48:46] -rw-------. 1 boinc boinc 181446246 Jun  3 14:37 shared/HITS.pool.root.1
[2025-06-03 14:48:46]  *** Contents of shared directory: ***
[2025-06-03 14:48:46] total 388172
[2025-06-03 14:48:46] -rw-r--r--. 2 boinc boinc 214034304 Jun  3 11:11 ATLAS.root_0
[2025-06-03 14:48:46] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:11 start_atlas.sh
[2025-06-03 14:48:46] -rw-r--r--. 2 boinc boinc    508881 Jun  3 11:11 input.tar.gz
[2025-06-03 14:48:46] -rw-------. 1 boinc boinc 181446246 Jun  3 14:37 HITS.pool.root.1
[2025-06-03 14:48:46] -rw-------. 1 boinc boinc   1474560 Jun  3 14:39 result.tar.gz
14:48:48 (1136): run_atlas exited; CPU time 45670.184101
14:48:48 (1136): called boinc_finish(0)

</stderr_txt>
]]>

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