Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:53:30 (7906): wrapper (7.7.26015): starting
11:53:30 (7906): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:53:30] Arguments: --nthreads 8
[2025-06-03 11:53:30] Threads: 8
[2025-06-03 11:53:30] Checking for CVMFS
[2025-06-03 11:53:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:53:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:53:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:53:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:53:32] 2.11.2.0 31392 31626 96204 146737 3 59 23734886 25165825 4635 130560 0 16553239 99.770 19037382 2002 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 11:53:32] CVMFS is ok
[2025-06-03 11:53:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:53:32] Checking for apptainer binary...
[2025-06-03 11:53:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:53:32] Running /usr/bin/apptainer --version
[2025-06-03 11:53:32] apptainer version 1.3.2-1.el7
[2025-06-03 11:53:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:24:07] cg-vwn267.simple-grid.lan
[2025-06-03 12:24:07] apptainer works
[2025-06-03 12:24:07] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:24:07] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:24:07] Starting ATLAS job with PandaID=6677400187
[2025-06-03 12:24:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 16:29:33]  *** The last 200 lines of the pilot log: ***
[2025-06-03 16:29:33] 2025-06-03 14:23:35,571 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6677400187/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 16:29:33] 2025-06-03 14:23:35,572 | INFO     | extracted standard info from prmon json
[2025-06-03 16:29:33] 2025-06-03 14:23:35,572 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 16:29:33] 2025-06-03 14:23:35,572 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:29:33] 2025-06-03 14:23:35,573 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:29:33] 2025-06-03 14:23:35,573 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:29:33] 2025-06-03 14:23:35,578 | INFO     | fitting pss+swap vs Time
[2025-06-03 16:29:33] 2025-06-03 14:23:35,578 | INFO     | sum of square deviations: 3438620752.0
[2025-06-03 16:29:33] 2025-06-03 14:23:35,580 | INFO     | sum of deviations: 75900363066.99998
[2025-06-03 16:29:33] 2025-06-03 14:23:35,580 | INFO     | mean x: 1748953732.0
[2025-06-03 16:29:33] 2025-06-03 14:23:35,580 | INFO     | mean y: 2432676.1748878923
[2025-06-03 16:29:33] 2025-06-03 14:23:35,581 | INFO     | -- intersect: -38602063957.82454
[2025-06-03 16:29:33] 2025-06-03 14:23:35,581 | INFO     | intersect: -38602063957.82454
[2025-06-03 16:29:33] 2025-06-03 14:23:35,581 | INFO     | chi2: 8.111887070092259
[2025-06-03 16:29:33] 2025-06-03 14:23:35,582 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 16:29:33] 2025-06-03 14:23:35,583 | INFO     | sum of deviations: 88759447052.49998
[2025-06-03 16:29:33] 2025-06-03 14:23:35,584 | INFO     | mean x: 1748953579.5
[2025-06-03 16:29:33] 2025-06-03 14:23:35,584 | INFO     | mean y: 2441166.5642201835
[2025-06-03 16:29:33] 2025-06-03 14:23:35,584 | INFO     | -- intersect: -48320582865.44323
[2025-06-03 16:29:33] 2025-06-03 14:23:35,584 | INFO     | intersect: -48320582865.44323
[2025-06-03 16:29:33] 2025-06-03 14:23:35,585 | INFO     | chi2: 7.425082204482419
[2025-06-03 16:29:33] 2025-06-03 14:23:35,585 | INFO     | current chi2=7.425082204482419 (change=8.466647275478259 %)
[2025-06-03 16:29:33] 2025-06-03 14:23:35,585 | INFO     | right removable region: 217
[2025-06-03 16:29:33] 2025-06-03 14:23:35,585 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 16:29:33] 2025-06-03 14:23:35,587 | INFO     | sum of deviations: -1489952907.499998
[2025-06-03 16:29:33] 2025-06-03 14:23:35,587 | INFO     | mean x: 1748953884.5
[2025-06-03 16:29:33] 2025-06-03 14:23:35,588 | INFO     | mean y: 2484821.5550458715
[2025-06-03 16:29:33] 2025-06-03 14:23:35,588 | INFO     | -- intersect: 813655295.2625443
[2025-06-03 16:29:33] 2025-06-03 14:23:35,588 | INFO     | intersect: 813655295.2625443
[2025-06-03 16:29:33] 2025-06-03 14:23:35,589 | INFO     | chi2: 3.055935673506392
[2025-06-03 16:29:33] 2025-06-03 14:23:35,589 | INFO     | current chi2=3.055935673506392 (change=62.32768470392875 %)
[2025-06-03 16:29:33] 2025-06-03 14:23:35,589 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 16:29:33] 2025-06-03 14:23:35,591 | INFO     | sum of deviations: -49293172128.99999
[2025-06-03 16:29:33] 2025-06-03 14:23:35,591 | INFO     | mean x: 1748954037.0
[2025-06-03 16:29:33] 2025-06-03 14:23:35,591 | INFO     | mean y: 2518417.511737089
[2025-06-03 16:29:33] 2025-06-03 14:23:35,591 | INFO     | -- intersect: 28773686981.165356
[2025-06-03 16:29:33] 2025-06-03 14:23:35,591 | INFO     | intersect: 28773686981.165356
[2025-06-03 16:29:33] 2025-06-03 14:23:35,592 | INFO     | chi2: 1.0232477247661296
[2025-06-03 16:29:33] 2025-06-03 14:23:35,592 | INFO     | current chi2=1.0232477247661296 (change=66.51605812133961 %)
[2025-06-03 16:29:33] 2025-06-03 14:23:35,592 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 16:29:33] 2025-06-03 14:23:35,594 | INFO     | sum of deviations: -52451229694.500015
[2025-06-03 16:29:33] 2025-06-03 14:23:35,594 | INFO     | mean x: 1748954189.5
[2025-06-03 16:29:33] 2025-06-03 14:23:35,594 | INFO     | mean y: 2520707.1298076925
[2025-06-03 16:29:33] 2025-06-03 14:23:35,594 | INFO     | -- intersect: 32878274404.884754
[2025-06-03 16:29:33] 2025-06-03 14:23:35,594 | INFO     | intersect: 32878274404.884754
[2025-06-03 16:29:33] 2025-06-03 14:23:35,595 | INFO     | chi2: 0.9766741718719008
[2025-06-03 16:29:33] 2025-06-03 14:23:35,595 | INFO     | current chi2=0.9766741718719008 (change=4.551542287071641 %)
[2025-06-03 16:29:33] 2025-06-03 14:23:35,595 | INFO     | left removable region: 30
[2025-06-03 16:29:33] 2025-06-03 14:23:35,595 | INFO     | sum of square deviations: 2027639878.0
[2025-06-03 16:29:33] 2025-06-03 14:23:35,596 | INFO     | sum of deviations: -18118574837.0
[2025-06-03 16:29:33] 2025-06-03 14:23:35,597 | INFO     | mean x: 1748954464.0
[2025-06-03 16:29:33] 2025-06-03 14:23:35,597 | INFO     | mean y: 2515251.256684492
[2025-06-03 16:29:33] 2025-06-03 14:23:35,597 | INFO     | -- intersect: 15630814283.205997
[2025-06-03 16:29:33] 2025-06-03 14:23:35,597 | INFO     | intersect: 15630814283.205997
[2025-06-03 16:29:33] 2025-06-03 14:23:35,597 | INFO     | chi2: 0.13763087189089174
[2025-06-03 16:29:33] 2025-06-03 14:23:35,597 | INFO     | -- intersect: 15630814283.205997
[2025-06-03 16:29:33] 2025-06-03 14:23:35,598 | INFO     | current memory leak: -8.94 B/s (using 187 data points, chi2=0.14)
[2025-06-03 16:29:33] 2025-06-03 14:23:35,598 | INFO     | ..............................
[2025-06-03 16:29:33] 2025-06-03 14:23:35,599 | INFO     | . Timing measurements:
[2025-06-03 16:29:33] 2025-06-03 14:23:35,599 | INFO     | . get job = 0 s
[2025-06-03 16:29:33] 2025-06-03 14:23:35,599 | INFO     | . initial setup = 13 s
[2025-06-03 16:29:33] 2025-06-03 14:23:35,599 | INFO     | . payload setup = 173 s
[2025-06-03 16:29:33] 2025-06-03 14:23:35,599 | INFO     | . stage-in = 0 s
[2025-06-03 16:29:33] 2025-06-03 14:23:35,599 | INFO     | . payload execution = 13712 s
[2025-06-03 16:29:33] 2025-06-03 14:23:35,599 | INFO     | . stage-out = 3 s
[2025-06-03 16:29:33] 2025-06-03 14:23:35,599 | INFO     | . log creation = 1 s
[2025-06-03 16:29:33] 2025-06-03 14:23:35,599 | INFO     | ..............................
[2025-06-03 16:29:33] 2025-06-03 14:23:35,730 | INFO     | 
[2025-06-03 16:29:33] 2025-06-03 14:23:35,730 | INFO     | job summary report
[2025-06-03 16:29:33] 2025-06-03 14:23:35,730 | INFO     | --------------------------------------------------
[2025-06-03 16:29:33] 2025-06-03 14:23:35,731 | INFO     | PanDA job id: 6677400187
[2025-06-03 16:29:33] 2025-06-03 14:23:35,731 | INFO     | task id: 45006595
[2025-06-03 16:29:33] 2025-06-03 14:23:35,731 | INFO     | errors: (none)
[2025-06-03 16:29:33] 2025-06-03 14:23:35,731 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 16:29:33] 2025-06-03 14:23:35,731 | INFO     | pilot state: finished 
[2025-06-03 16:29:33] 2025-06-03 14:23:35,731 | INFO     | transexitcode: 0
[2025-06-03 16:29:33] 2025-06-03 14:23:35,731 | INFO     | exeerrorcode: 0
[2025-06-03 16:29:33] 2025-06-03 14:23:35,731 | INFO     | exeerrordiag: 
[2025-06-03 16:29:33] 2025-06-03 14:23:35,731 | INFO     | exitcode: 0
[2025-06-03 16:29:33] 2025-06-03 14:23:35,731 | INFO     | exitmsg: OK
[2025-06-03 16:29:33] 2025-06-03 14:23:35,731 | INFO     | cpuconsumptiontime: 50608 s
[2025-06-03 16:29:33] 2025-06-03 14:23:35,731 | INFO     | nevents: 400
[2025-06-03 16:29:33] 2025-06-03 14:23:35,731 | INFO     | neventsw: 0
[2025-06-03 16:29:33] 2025-06-03 14:23:35,732 | INFO     | pid: 4318
[2025-06-03 16:29:33] 2025-06-03 14:23:35,732 | INFO     | pgrp: 4318
[2025-06-03 16:29:33] 2025-06-03 14:23:35,732 | INFO     | corecount: 8
[2025-06-03 16:29:33] 2025-06-03 14:23:35,732 | INFO     | event service: False
[2025-06-03 16:29:33] 2025-06-03 14:23:35,732 | INFO     | sizes: {0: 2404955, 1: 2405210, 12: 2405210, 23: 2405238, 33: 2405266, 44: 2405322, 55: 2405478, 66: 2405506, 76: 2405534, 87: 2405590, 92: 2405824, 98: 2406132, 1
[2025-06-03 16:29:33] 2025-06-03 14:23:35,732 | INFO     | --------------------------------------------------
[2025-06-03 16:29:33] 2025-06-03 14:23:35,732 | INFO     | 
[2025-06-03 16:29:33] 2025-06-03 14:23:35,732 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-03 16:29:33] 2025-06-03 14:23:36,121 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,122 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,122 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,122 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,122 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,122 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,123 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,123 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,123 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,123 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,123 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,123 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,123 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,123 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,123 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,124 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,124 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,124 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 16:29:33] 2025-06-03 14:23:36,124 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,124 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 16:29:33] 2025-06-03 14:23:36,124 | INFO     | job 6677400187 has completed (purged errors)
[2025-06-03 16:29:33] 2025-06-03 14:23:36,125 | INFO     | overall cleanup function is called
[2025-06-03 16:29:33] 2025-06-03 14:23:37,135 | INFO     | --- collectZombieJob: --- 10, [4318]
[2025-06-03 16:29:33] 2025-06-03 14:23:37,135 | INFO     | zombie collector waiting for pid 4318
[2025-06-03 16:29:33] 2025-06-03 14:23:37,135 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 16:29:33] 2025-06-03 14:23:37,135 | INFO     | collected zombie processes
[2025-06-03 16:29:33] 2025-06-03 14:23:37,135 | INFO     | will attempt to kill all subprocesses of pid=4318
[2025-06-03 16:29:33] 2025-06-03 14:23:37,235 | INFO     | process IDs to be killed: [4318] (in reverse order)
[2025-06-03 16:29:33] 2025-06-03 14:23:37,752 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 16:29:33] 2025-06-03 14:23:37,752 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 16:29:33] 2025-06-03 14:23:37,756 | INFO     | did not find any defunct processes belonging to 4318
[2025-06-03 16:29:33] 2025-06-03 14:23:37,759 | INFO     | did not find any defunct processes belonging to 4318
[2025-06-03 16:29:33] 2025-06-03 14:23:37,759 | INFO     | ready for new job
[2025-06-03 16:29:33] 2025-06-03 14:23:37,759 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 16:29:33] 2025-06-03 14:23:37,762 | INFO     | **************************************
[2025-06-03 16:29:33] 2025-06-03 14:23:37,762 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 16:29:33] 2025-06-03 14:23:37,762 | INFO     | **************************************
[2025-06-03 16:29:33] 2025-06-03 14:23:37,762 | INFO     | 
[2025-06-03 16:29:33] 2025-06-03 14:23:37,763 | INFO     | pilot is running in a VM
[2025-06-03 16:29:33] 2025-06-03 14:23:37,763 | INFO     | architecture information:
[2025-06-03 16:29:33] 2025-06-03 14:23:37,764 | INFO     | executing command: cat /etc/os-release
[2025-06-03 16:29:33] 2025-06-03 14:23:37,970 | INFO     | cat /etc/os-release:
[2025-06-03 16:29:33] NAME="CentOS Linux"
[2025-06-03 16:29:33] VERSION="7 (Core)"
[2025-06-03 16:29:33] ID="centos"
[2025-06-03 16:29:33] ID_LIKE="rhel fedora"
[2025-06-03 16:29:33] VERSION_ID="7"
[2025-06-03 16:29:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 16:29:33] ANSI_COLOR="0;31"
[2025-06-03 16:29:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 16:29:33] HOME_URL="https://www.centos.org/"
[2025-06-03 16:29:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 16:29:33] 
[2025-06-03 16:29:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 16:29:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 16:29:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 16:29:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 16:29:33] 
[2025-06-03 16:29:33] 2025-06-03 14:23:37,971 | INFO     | **************************************
[2025-06-03 16:29:33] 2025-06-03 14:23:38,474 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-03 16:29:33] 2025-06-03 14:23:38,683 | INFO     | sufficient remaining disk space (496575184896 B)
[2025-06-03 16:29:33] 2025-06-03 14:23:38,684 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 16:29:33] 2025-06-03 14:23:38,684 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 16:29:33] 2025-06-03 14:23:38,684 | INFO     | update_server=False
[2025-06-03 16:29:33] 2025-06-03 14:23:38,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 16:29:33] 2025-06-03 14:23:38,685 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:29:33] 2025-06-03 14:23:38,685 | INFO     | aborting loop
[2025-06-03 16:29:33] 2025-06-03 14:23:38,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 16:29:33] 2025-06-03 14:23:38,724 | INFO     | all data control threads have been joined
[2025-06-03 16:29:33] 2025-06-03 14:23:38,747 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 16:29:33] 2025-06-03 14:23:38,747 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 16:29:33] 2025-06-03 14:23:38,747 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 16:29:33] 2025-06-03 14:23:38,761 | INFO     | all job control threads have been joined
[2025-06-03 16:29:33] 2025-06-03 14:23:39,691 | INFO     | [job] retrieve thread has finished
[2025-06-03 16:29:33] 2025-06-03 14:23:39,692 | INFO     | [job] job monitor thread has finished
[2025-06-03 16:29:33] 2025-06-03 14:23:39,730 | INFO     | [data] control thread has finished
[2025-06-03 16:29:33] 2025-06-03 14:23:39,758 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 16:29:33] 2025-06-03 14:23:39,767 | INFO     | [job] control thread has finished
[2025-06-03 16:29:33] 2025-06-03 14:23:39,904 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 16:29:33] 2025-06-03 14:23:40,065 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 16:29:33] 2025-06-03 14:23:40,072 | INFO     | [job] validate thread has finished
[2025-06-03 16:29:33] 2025-06-03 14:23:40,096 | INFO     | all payload control threads have been joined
[2025-06-03 16:29:33] 2025-06-03 14:23:40,166 | INFO     | [data] copytool_in thread has finished
[2025-06-03 16:29:33] 2025-06-03 14:23:40,524 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 16:29:33] 2025-06-03 14:23:40,643 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 16:29:33] 2025-06-03 14:23:40,712 | INFO     | [payload] validate_post thread has finished
[2025-06-03 16:29:33] 2025-06-03 14:23:40,746 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:29:33] 2025-06-03 14:23:41,102 | INFO     | [payload] control thread has finished
[2025-06-03 16:29:33] 2025-06-03 14:23:41,121 | INFO     | [payload] failed_post thread has finished
[2025-06-03 16:29:33] 2025-06-03 14:23:41,752 | INFO     | [job] queue monitor thread has finished
[2025-06-03 16:29:33] 2025-06-03 14:23:42,073 | INFO     | [data] copytool_out thread has finished
[2025-06-03 16:29:33] 2025-06-03 14:23:42,723 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 16:29:33] 2025-06-03 14:23:44,717 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139804905314112)>', '<ExcThread(monitor, started 139804331206400)>']
[2025-06-03 16:29:33] 2025-06-03 14:23:44,782 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 16:29:33] 2025-06-03 14:23:44,782 | INFO     | [monitor] control thread has ended
[2025-06-03 16:29:33] 2025-06-03 14:23:49,743 | INFO     | all workflow threads have been joined
[2025-06-03 16:29:33] 2025-06-03 14:23:49,743 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 16:29:33] 2025-06-03 14:23:49,743 | INFO     | traces error code: 0
[2025-06-03 16:29:33] 2025-06-03 14:23:49,744 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 16:29:33] 2025-06-03 14:23:49,988 [wrapper] ==== pilot stdout END ====
[2025-06-03 16:29:33] 2025-06-03 14:23:50,039 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 16:29:33] 2025-06-03 14:23:50,147 [wrapper] pilotpid: 30008
[2025-06-03 16:29:33] 2025-06-03 14:23:50,265 [wrapper] Pilot exit status: 0
[2025-06-03 16:29:33] 2025-06-03 14:23:50,653 [wrapper] pandaids: 6677400187
[2025-06-03 16:29:33] 2025-06-03 14:23:51,481 [wrapper] cleanup supervisor_pilot 12851 30009
[2025-06-03 16:29:33] 2025-06-03 14:23:51,537 [wrapper] Test setup, not cleaning
[2025-06-03 16:29:33] 2025-06-03 14:23:51,599 [wrapper] apfmon messages muted
[2025-06-03 16:29:33] 2025-06-03 14:23:51,697 [wrapper] ==== wrapper stdout END ====
[2025-06-03 16:29:33] 2025-06-03 14:23:51,804 [wrapper] ==== wrapper stderr END ====
[2025-06-03 16:29:33]  *** Error codes and diagnostics ***
[2025-06-03 16:29:33]     "exeErrorCode": 0,
[2025-06-03 16:29:33]     "exeErrorDiag": "",
[2025-06-03 16:29:33]     "pilotErrorCode": 0,
[2025-06-03 16:29:33]     "pilotErrorDiag": "",
[2025-06-03 16:29:33]  *** Listing of results directory ***
[2025-06-03 16:29:33] total 398064
[2025-06-03 16:29:33] -rw-r--r--. 1 boinc boinc    495897 Jun  2 22:11 pilot3.tar.gz
[2025-06-03 16:29:33] -rw-r--r--. 1 boinc boinc      5111 Jun  2 22:39 queuedata.json
[2025-06-03 16:29:33] -rwx------. 1 boinc boinc     37140 Jun  2 22:39 runpilot2-wrapper.sh
[2025-06-03 16:29:33] -rw-r--r--. 1 boinc boinc       100 Jun  3 11:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 16:29:33] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 11:53 run_atlas
[2025-06-03 16:29:33] -rw-r--r--. 1 boinc boinc       105 Jun  3 11:53 job.xml
[2025-06-03 16:29:33] -rw-r--r--. 1 boinc boinc      6391 Jun  3 11:53 init_data.xml
[2025-06-03 16:29:33] -rw-r--r--. 2 boinc boinc 216416248 Jun  3 11:53 EVNT.45006593._000457.pool.root.1
[2025-06-03 16:29:33] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:53 start_atlas.sh
[2025-06-03 16:29:33] drwxrwx--x. 2 boinc boinc        68 Jun  3 11:53 shared
[2025-06-03 16:29:33] -rw-r--r--. 2 boinc boinc    508879 Jun  3 11:53 input.tar.gz
[2025-06-03 16:29:33] -rw-r--r--. 1 boinc boinc         0 Jun  3 11:53 boinc_lockfile
[2025-06-03 16:29:33] -rw-r--r--. 1 boinc boinc      2524 Jun  3 12:24 pandaJob.out
[2025-06-03 16:29:33] -rw-------. 1 boinc boinc    985490 Jun  3 12:27 agis_schedconf.cvmfs.json
[2025-06-03 16:29:33] drwx------. 4 boinc boinc      4096 Jun  3 12:27 pilot3
[2025-06-03 16:29:33] -rw-------. 1 boinc boinc 184224732 Jun  3 16:20 HITS.45006595._011411.pool.root.1
[2025-06-03 16:29:33] -rw-r--r--. 1 boinc boinc       531 Jun  3 16:21 boinc_task_state.xml
[2025-06-03 16:29:33] -rw-------. 1 boinc boinc      1013 Jun  3 16:21 memory_monitor_summary.json
[2025-06-03 16:29:33] -rw-------. 1 boinc boinc   1603667 Jun  3 16:22 agis_ddmendpoints.agis.ALL.json
[2025-06-03 16:29:33] -rw-------. 1 boinc boinc    379492 Jun  3 16:22 log.45006595._011411.job.log.tgz.1
[2025-06-03 16:29:33] -rw-------. 1 boinc boinc      7686 Jun  3 16:23 heartbeat.json
[2025-06-03 16:29:33] -rw-------. 1 boinc boinc        95 Jun  3 16:23 pilot_heartbeat.json
[2025-06-03 16:29:33] -rw-------. 1 boinc boinc      4416 Jun  3 16:23 pilotlog.txt
[2025-06-03 16:29:33] -rw-------. 1 boinc boinc   1202326 Jun  3 16:23 log.45006595._011411.job.log.1
[2025-06-03 16:29:33] -rw-------. 1 boinc boinc       357 Jun  3 16:23 output.list
[2025-06-03 16:29:33] -rw-r--r--. 1 boinc boinc       620 Jun  3 16:23 runtime_log
[2025-06-03 16:29:33] -rw-------. 1 boinc boinc   1597440 Jun  3 16:23 result.tar.gz
[2025-06-03 16:29:33] -rw-r--r--. 1 boinc boinc      8659 Jun  3 16:23 runtime_log.err
[2025-06-03 16:29:33] -rw-------. 1 boinc boinc       656 Jun  3 16:23 dv2KDmI7Qg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcdgKDmOkxbdn.diag
[2025-06-03 16:29:33] -rw-r--r--. 1 boinc boinc      8192 Jun  3 16:29 boinc_mmap_file
[2025-06-03 16:29:33] -rw-r--r--. 1 boinc boinc        28 Jun  3 16:29 wrapper_checkpoint.txt
[2025-06-03 16:29:33] -rw-r--r--. 1 boinc boinc     20523 Jun  3 16:29 stderr.txt
[2025-06-03 16:29:33] HITS file was successfully produced:
[2025-06-03 16:29:34] -rw-------. 1 boinc boinc 184224732 Jun  3 16:20 shared/HITS.pool.root.1
[2025-06-03 16:29:34]  *** Contents of shared directory: ***
[2025-06-03 16:29:34] total 393328
[2025-06-03 16:29:34] -rw-r--r--. 2 boinc boinc 216416248 Jun  3 11:53 ATLAS.root_0
[2025-06-03 16:29:34] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:53 start_atlas.sh
[2025-06-03 16:29:34] -rw-r--r--. 2 boinc boinc    508879 Jun  3 11:53 input.tar.gz
[2025-06-03 16:29:34] -rw-------. 1 boinc boinc 184224732 Jun  3 16:20 HITS.pool.root.1
[2025-06-03 16:29:34] -rw-------. 1 boinc boinc   1597440 Jun  3 16:23 result.tar.gz
16:29:35 (7906): run_atlas exited; CPU time 50803.534781
16:29:35 (7906): called boinc_finish(0)

</stderr_txt>
]]>

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