Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:24:43 (18861): wrapper (7.7.26015): starting
12:24:43 (18861): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:24:43] Arguments: --nthreads 8
[2025-06-03 12:24:43] Threads: 8
[2025-06-03 12:24:43] Checking for CVMFS
[2025-06-03 12:24:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:24:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:24:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:24:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:24:45] 2.11.2.0 11201 31657 89624 146737 2 93 15357299 25165824 4478 130560 0 16201486 99.784 19260345 2004 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 12:24:45] CVMFS is ok
[2025-06-03 12:24:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:24:45] Checking for apptainer binary...
[2025-06-03 12:24:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:24:45] Running /usr/bin/apptainer --version
[2025-06-03 12:24:45] apptainer version 1.3.2-1.el7
[2025-06-03 12:24:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:51:49] cg-vwn265.simple-grid.lan
[2025-06-03 12:51:49] apptainer works
[2025-06-03 12:51:49] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:51:49] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:51:49] Starting ATLAS job with PandaID=6677400907
[2025-06-03 12:51:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:50:50]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:50:50] 2025-06-03 14:37:44,297 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:50:50] 2025-06-03 14:37:44,297 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:50:50] 2025-06-03 14:37:44,297 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:50:50] 2025-06-03 14:37:44,302 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:50:50] 2025-06-03 14:37:44,303 | INFO     | sum of square deviations: 3301699115.0
[2025-06-03 17:50:50] 2025-06-03 14:37:44,308 | INFO     | sum of deviations: -8755819097.999996
[2025-06-03 17:50:50] 2025-06-03 14:37:44,308 | INFO     | mean x: 1748954679.5
[2025-06-03 17:50:50] 2025-06-03 14:37:44,308 | INFO     | mean y: 2482677.481818182
[2025-06-03 17:50:50] 2025-06-03 14:37:44,308 | INFO     | -- intersect: 4640558483.5816
[2025-06-03 17:50:50] 2025-06-03 14:37:44,308 | INFO     | intersect: 4640558483.5816
[2025-06-03 17:50:50] 2025-06-03 14:37:44,309 | INFO     | chi2: 2.4374349182230026
[2025-06-03 17:50:50] 2025-06-03 14:37:44,309 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 17:50:50] 2025-06-03 14:37:44,311 | INFO     | sum of deviations: 5709313605.000001
[2025-06-03 17:50:50] 2025-06-03 14:37:44,311 | INFO     | mean x: 1748954527.0
[2025-06-03 17:50:50] 2025-06-03 14:37:44,311 | INFO     | mean y: 2492518.2093023257
[2025-06-03 17:50:50] 2025-06-03 14:37:44,311 | INFO     | -- intersect: -3237753670.1677346
[2025-06-03 17:50:50] 2025-06-03 14:37:44,311 | INFO     | intersect: -3237753670.1677346
[2025-06-03 17:50:50] 2025-06-03 14:37:44,312 | INFO     | chi2: 1.6673450027321626
[2025-06-03 17:50:50] 2025-06-03 14:37:44,312 | INFO     | current chi2=1.6673450027321626 (change=31.594276004393567 %)
[2025-06-03 17:50:50] 2025-06-03 14:37:44,312 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 17:50:50] 2025-06-03 14:37:44,314 | INFO     | sum of deviations: 5551942876.999998
[2025-06-03 17:50:50] 2025-06-03 14:37:44,314 | INFO     | mean x: 1748954374.5
[2025-06-03 17:50:50] 2025-06-03 14:37:44,314 | INFO     | mean y: 2492403.933333333
[2025-06-03 17:50:50] 2025-06-03 14:37:44,314 | INFO     | -- intersect: -3378911183.094143
[2025-06-03 17:50:50] 2025-06-03 14:37:44,314 | INFO     | intersect: -3378911183.094143
[2025-06-03 17:50:50] 2025-06-03 14:37:44,315 | INFO     | chi2: 1.667742741652282
[2025-06-03 17:50:50] 2025-06-03 14:37:44,315 | INFO     | current chi2=1.667742741652282 (change=-0.02385462633514778 %)
[2025-06-03 17:50:50] 2025-06-03 14:37:44,315 | INFO     | right removable region: 209
[2025-06-03 17:50:50] 2025-06-03 14:37:44,315 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 17:50:50] 2025-06-03 14:37:44,317 | INFO     | sum of deviations: -42651193778.0
[2025-06-03 17:50:50] 2025-06-03 14:37:44,317 | INFO     | mean x: 1748954832.0
[2025-06-03 17:50:50] 2025-06-03 14:37:44,317 | INFO     | mean y: 2505934.493023256
[2025-06-03 17:50:50] 2025-06-03 14:37:44,317 | INFO     | -- intersect: 24208636781.57282
[2025-06-03 17:50:50] 2025-06-03 14:37:44,317 | INFO     | intersect: 24208636781.57282
[2025-06-03 17:50:50] 2025-06-03 14:37:44,325 | INFO     | chi2: 0.9638115292316074
[2025-06-03 17:50:50] 2025-06-03 14:37:44,325 | INFO     | current chi2=0.9638115292316074 (change=60.4579584043102 %)
[2025-06-03 17:50:50] 2025-06-03 14:37:44,326 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 17:50:50] 2025-06-03 14:37:44,327 | INFO     | sum of deviations: -40001127590.0
[2025-06-03 17:50:50] 2025-06-03 14:37:44,327 | INFO     | mean x: 1748954984.5
[2025-06-03 17:50:50] 2025-06-03 14:37:44,327 | INFO     | mean y: 2503972.0
[2025-06-03 17:50:50] 2025-06-03 14:37:44,328 | INFO     | -- intersect: 24365147192.67405
[2025-06-03 17:50:50] 2025-06-03 14:37:44,328 | INFO     | intersect: 24365147192.67405
[2025-06-03 17:50:50] 2025-06-03 14:37:44,328 | INFO     | chi2: 0.9497763204351721
[2025-06-03 17:50:50] 2025-06-03 14:37:44,328 | INFO     | current chi2=0.9497763204351721 (change=1.456219226556125 %)
[2025-06-03 17:50:50] 2025-06-03 14:37:44,328 | INFO     | left removable region: 20
[2025-06-03 17:50:50] 2025-06-03 14:37:44,328 | INFO     | sum of square deviations: 2093397390.0
[2025-06-03 17:50:50] 2025-06-03 14:37:44,330 | INFO     | sum of deviations: -11110267879.0
[2025-06-03 17:50:50] 2025-06-03 14:37:44,330 | INFO     | mean x: 1748954954.0
[2025-06-03 17:50:50] 2025-06-03 14:37:44,330 | INFO     | mean y: 2503348.328042328
[2025-06-03 17:50:50] 2025-06-03 14:37:44,330 | INFO     | -- intersect: 9284715192.130964
[2025-06-03 17:50:50] 2025-06-03 14:37:44,330 | INFO     | intersect: 9284715192.130964
[2025-06-03 17:50:50] 2025-06-03 14:37:44,331 | INFO     | chi2: 0.10358351579325069
[2025-06-03 17:50:50] 2025-06-03 14:37:44,331 | INFO     | -- intersect: 9284715192.130964
[2025-06-03 17:50:50] 2025-06-03 14:37:44,331 | INFO     | current memory leak: -5.31 B/s (using 189 data points, chi2=0.10)
[2025-06-03 17:50:50] 2025-06-03 14:37:44,332 | INFO     | ..............................
[2025-06-03 17:50:50] 2025-06-03 14:37:44,332 | INFO     | . Timing measurements:
[2025-06-03 17:50:50] 2025-06-03 14:37:44,332 | INFO     | . get job = 0 s
[2025-06-03 17:50:50] 2025-06-03 14:37:44,332 | INFO     | . initial setup = 2 s
[2025-06-03 17:50:50] 2025-06-03 14:37:44,332 | INFO     | . payload setup = 16 s
[2025-06-03 17:50:50] 2025-06-03 14:37:44,332 | INFO     | . stage-in = 0 s
[2025-06-03 17:50:50] 2025-06-03 14:37:44,332 | INFO     | . payload execution = 13388 s
[2025-06-03 17:50:50] 2025-06-03 14:37:44,332 | INFO     | . stage-out = 5 s
[2025-06-03 17:50:50] 2025-06-03 14:37:44,332 | INFO     | . log creation = 1 s
[2025-06-03 17:50:50] 2025-06-03 14:37:44,332 | INFO     | ..............................
[2025-06-03 17:50:50] 2025-06-03 14:37:44,447 | INFO     | 
[2025-06-03 17:50:50] 2025-06-03 14:37:44,448 | INFO     | job summary report
[2025-06-03 17:50:50] 2025-06-03 14:37:44,448 | INFO     | --------------------------------------------------
[2025-06-03 17:50:50] 2025-06-03 14:37:44,448 | INFO     | PanDA job id: 6677400907
[2025-06-03 17:50:50] 2025-06-03 14:37:44,448 | INFO     | task id: 45006595
[2025-06-03 17:50:50] 2025-06-03 14:37:44,448 | INFO     | errors: (none)
[2025-06-03 17:50:50] 2025-06-03 14:37:44,448 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:50:50] 2025-06-03 14:37:44,448 | INFO     | pilot state: finished 
[2025-06-03 17:50:50] 2025-06-03 14:37:44,448 | INFO     | transexitcode: 0
[2025-06-03 17:50:50] 2025-06-03 14:37:44,449 | INFO     | exeerrorcode: 0
[2025-06-03 17:50:50] 2025-06-03 14:37:44,449 | INFO     | exeerrordiag: 
[2025-06-03 17:50:50] 2025-06-03 14:37:44,449 | INFO     | exitcode: 0
[2025-06-03 17:50:50] 2025-06-03 14:37:44,449 | INFO     | exitmsg: OK
[2025-06-03 17:50:50] 2025-06-03 14:37:44,449 | INFO     | cpuconsumptiontime: 48568 s
[2025-06-03 17:50:50] 2025-06-03 14:37:44,449 | INFO     | nevents: 400
[2025-06-03 17:50:50] 2025-06-03 14:37:44,449 | INFO     | neventsw: 0
[2025-06-03 17:50:50] 2025-06-03 14:37:44,449 | INFO     | pid: 10099
[2025-06-03 17:50:50] 2025-06-03 14:37:44,449 | INFO     | pgrp: 10099
[2025-06-03 17:50:50] 2025-06-03 14:37:44,449 | INFO     | corecount: 8
[2025-06-03 17:50:50] 2025-06-03 14:37:44,449 | INFO     | event service: False
[2025-06-03 17:50:50] 2025-06-03 14:37:44,449 | INFO     | sizes: {0: 2404955, 1: 2405210, 2: 2405210, 10: 2405444, 12: 2405472, 13409: 2435190, 13415: 2444187, 13505: 2444301}
[2025-06-03 17:50:50] 2025-06-03 14:37:44,450 | INFO     | --------------------------------------------------
[2025-06-03 17:50:50] 2025-06-03 14:37:44,450 | INFO     | 
[2025-06-03 17:50:50] 2025-06-03 14:37:44,450 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 17:50:50] 2025-06-03 14:37:44,493 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,494 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,494 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,494 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,494 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,494 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,494 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,494 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,494 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,494 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,494 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,494 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,495 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,495 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,495 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,495 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,495 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,495 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:50:50] 2025-06-03 14:37:44,495 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,495 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:50:50] 2025-06-03 14:37:44,495 | INFO     | job 6677400907 has completed (purged errors)
[2025-06-03 17:50:50] 2025-06-03 14:37:44,495 | INFO     | overall cleanup function is called
[2025-06-03 17:50:50] 2025-06-03 14:37:45,504 | INFO     | --- collectZombieJob: --- 10, [10099]
[2025-06-03 17:50:50] 2025-06-03 14:37:45,504 | INFO     | zombie collector waiting for pid 10099
[2025-06-03 17:50:50] 2025-06-03 14:37:45,504 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:50:50] 2025-06-03 14:37:45,504 | INFO     | collected zombie processes
[2025-06-03 17:50:50] 2025-06-03 14:37:45,504 | INFO     | will attempt to kill all subprocesses of pid=10099
[2025-06-03 17:50:50] 2025-06-03 14:37:45,617 | INFO     | process IDs to be killed: [10099] (in reverse order)
[2025-06-03 17:50:50] 2025-06-03 14:37:46,392 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:50:50] 2025-06-03 14:37:46,392 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:50:50] 2025-06-03 14:37:46,396 | INFO     | did not find any defunct processes belonging to 10099
[2025-06-03 17:50:50] 2025-06-03 14:37:46,399 | INFO     | did not find any defunct processes belonging to 10099
[2025-06-03 17:50:50] 2025-06-03 14:37:46,399 | INFO     | ready for new job
[2025-06-03 17:50:50] 2025-06-03 14:37:46,399 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:50:50] 2025-06-03 14:37:46,401 | INFO     | **************************************
[2025-06-03 17:50:50] 2025-06-03 14:37:46,401 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:50:50] 2025-06-03 14:37:46,401 | INFO     | **************************************
[2025-06-03 17:50:50] 2025-06-03 14:37:46,401 | INFO     | 
[2025-06-03 17:50:50] 2025-06-03 14:37:46,402 | INFO     | pilot is running in a VM
[2025-06-03 17:50:50] 2025-06-03 14:37:46,402 | INFO     | architecture information:
[2025-06-03 17:50:50] 2025-06-03 14:37:46,404 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:50:50] 2025-06-03 14:37:46,450 | INFO     | cat /etc/os-release:
[2025-06-03 17:50:50] NAME="CentOS Linux"
[2025-06-03 17:50:50] VERSION="7 (Core)"
[2025-06-03 17:50:50] ID="centos"
[2025-06-03 17:50:50] ID_LIKE="rhel fedora"
[2025-06-03 17:50:50] VERSION_ID="7"
[2025-06-03 17:50:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:50:50] ANSI_COLOR="0;31"
[2025-06-03 17:50:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:50:50] HOME_URL="https://www.centos.org/"
[2025-06-03 17:50:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:50:50] 
[2025-06-03 17:50:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:50:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:50:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:50:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:50:50] 
[2025-06-03 17:50:50] 2025-06-03 14:37:46,450 | INFO     | **************************************
[2025-06-03 17:50:50] 2025-06-03 14:37:46,955 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 17:50:50] 2025-06-03 14:37:47,015 | INFO     | PID=1602 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 17:50:50] 2025-06-03 14:37:47,015 | INFO     | .. there are 9 such processes running
[2025-06-03 17:50:50] 2025-06-03 14:37:47,133 | INFO     | sufficient remaining disk space (496823697408 B)
[2025-06-03 17:50:50] 2025-06-03 14:37:47,134 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:50:50] 2025-06-03 14:37:47,134 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:50:50] 2025-06-03 14:37:47,134 | INFO     | update_server=False
[2025-06-03 17:50:50] 2025-06-03 14:37:47,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:50:50] 2025-06-03 14:37:47,134 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:50:50] 2025-06-03 14:37:47,134 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 17:50:50] 2025-06-03 14:37:47,135 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:50:50] 2025-06-03 14:37:47,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:50:50] 2025-06-03 14:37:47,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:50:50] 2025-06-03 14:37:47,141 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:50:50] 2025-06-03 14:37:47,141 | INFO     | aborting loop
[2025-06-03 17:50:50] 2025-06-03 14:37:47,329 | INFO     | all job control threads have been joined
[2025-06-03 17:50:50] 2025-06-03 14:37:47,763 | INFO     | all data control threads have been joined
[2025-06-03 17:50:50] 2025-06-03 14:37:47,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:50:50] 2025-06-03 14:37:48,031 | INFO     | all payload control threads have been joined
[2025-06-03 17:50:50] 2025-06-03 14:37:48,140 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:50:50] 2025-06-03 14:37:48,145 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:50:50] 2025-06-03 14:37:48,147 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:50:50] 2025-06-03 14:37:48,335 | INFO     | [job] control thread has finished
[2025-06-03 17:50:50] 2025-06-03 14:37:48,598 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:50:50] 2025-06-03 14:37:48,743 | INFO     | [job] validate thread has finished
[2025-06-03 17:50:50] 2025-06-03 14:37:48,748 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:50:50] 2025-06-03 14:37:48,751 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:50:50] 2025-06-03 14:37:48,769 | INFO     | [data] control thread has finished
[2025-06-03 17:50:50] 2025-06-03 14:37:49,037 | INFO     | [payload] control thread has finished
[2025-06-03 17:50:50] 2025-06-03 14:37:49,086 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:50:50] 2025-06-03 14:37:49,461 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:50:50] 2025-06-03 14:37:49,475 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:50:50] 2025-06-03 14:37:49,520 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:50:50] 2025-06-03 14:37:49,927 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:50:50] 2025-06-03 14:37:50,467 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:50:50] 2025-06-03 14:37:51,144 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:50:50] 2025-06-03 14:37:51,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067396503360)>', '<ExcThread(monitor, started 140066726864640)>']
[2025-06-03 17:50:50] 2025-06-03 14:37:52,164 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:50:50] 2025-06-03 14:37:52,164 | INFO     | [monitor] control thread has ended
[2025-06-03 17:50:50] 2025-06-03 14:37:56,665 | INFO     | all workflow threads have been joined
[2025-06-03 17:50:50] 2025-06-03 14:37:56,665 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:50:50] 2025-06-03 14:37:56,665 | INFO     | traces error code: 0
[2025-06-03 17:50:50] 2025-06-03 14:37:56,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:50:50] 2025-06-03 14:37:56,999 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:50:50] 2025-06-03 14:37:57,047 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:50:50] 2025-06-03 14:37:57,101 [wrapper] pilotpid: 1602
[2025-06-03 17:50:50] 2025-06-03 14:37:57,210 [wrapper] Pilot exit status: 0
[2025-06-03 17:50:50] 2025-06-03 14:37:57,596 [wrapper] pandaids: 6677400907
[2025-06-03 17:50:50] 2025-06-03 14:37:58,392 [wrapper] cleanup supervisor_pilot 15682 1603
[2025-06-03 17:50:50] 2025-06-03 14:37:58,471 [wrapper] Test setup, not cleaning
[2025-06-03 17:50:50] 2025-06-03 14:37:58,542 [wrapper] apfmon messages muted
[2025-06-03 17:50:50] 2025-06-03 14:37:58,633 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:50:50] 2025-06-03 14:37:58,738 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:50:50]  *** Error codes and diagnostics ***
[2025-06-03 17:50:50]     "exeErrorCode": 0,
[2025-06-03 17:50:50]     "exeErrorDiag": "",
[2025-06-03 17:50:50]     "pilotErrorCode": 0,
[2025-06-03 17:50:50]     "pilotErrorDiag": "",
[2025-06-03 17:50:50]  *** Listing of results directory ***
[2025-06-03 17:50:50] total 388596
[2025-06-03 17:50:50] -rw-r--r--. 1 boinc boinc    495897 Jun  2 22:47 pilot3.tar.gz
[2025-06-03 17:50:50] -rw-r--r--. 1 boinc boinc      5111 Jun  2 23:00 queuedata.json
[2025-06-03 17:50:50] -rwx------. 1 boinc boinc     37140 Jun  2 23:00 runpilot2-wrapper.sh
[2025-06-03 17:50:50] -rw-r--r--. 1 boinc boinc       100 Jun  3 12:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:50:50] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 12:24 run_atlas
[2025-06-03 17:50:50] -rw-r--r--. 1 boinc boinc       105 Jun  3 12:24 job.xml
[2025-06-03 17:50:50] -rw-r--r--. 2 boinc boinc 215615705 Jun  3 12:24 EVNT.45006593._000473.pool.root.1
[2025-06-03 17:50:50] -rw-r--r--. 1 boinc boinc      6391 Jun  3 12:24 init_data.xml
[2025-06-03 17:50:50] -rw-r--r--. 2 boinc boinc     15093 Jun  3 12:24 start_atlas.sh
[2025-06-03 17:50:50] drwxrwx--x. 2 boinc boinc        68 Jun  3 12:24 shared
[2025-06-03 17:50:50] -rw-r--r--. 2 boinc boinc    508871 Jun  3 12:24 input.tar.gz
[2025-06-03 17:50:50] -rw-r--r--. 1 boinc boinc         0 Jun  3 12:24 boinc_lockfile
[2025-06-03 17:50:50] -rw-r--r--. 1 boinc boinc      2524 Jun  3 12:51 pandaJob.out
[2025-06-03 17:50:50] -rw-------. 1 boinc boinc    985490 Jun  3 12:52 agis_schedconf.cvmfs.json
[2025-06-03 17:50:50] drwx------. 4 boinc boinc      4096 Jun  3 12:52 pilot3
[2025-06-03 17:50:50] -rw-------. 1 boinc boinc 175348794 Jun  3 16:34 HITS.45006595._011824.pool.root.1
[2025-06-03 17:50:50] -rw-r--r--. 1 boinc boinc       531 Jun  3 16:35 boinc_task_state.xml
[2025-06-03 17:50:50] -rw-------. 1 boinc boinc      1019 Jun  3 16:36 memory_monitor_summary.json
[2025-06-03 17:50:50] -rw-------. 1 boinc boinc   1603667 Jun  3 16:36 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:50:50] -rw-------. 1 boinc boinc    391701 Jun  3 16:36 log.45006595._011824.job.log.tgz.1
[2025-06-03 17:50:50] -rw-------. 1 boinc boinc        95 Jun  3 16:36 pilot_heartbeat.json
[2025-06-03 17:50:50] -rw-------. 1 boinc boinc      7685 Jun  3 16:37 heartbeat.json
[2025-06-03 17:50:50] -rw-------. 1 boinc boinc      4930 Jun  3 16:37 pilotlog.txt
[2025-06-03 17:50:50] -rw-------. 1 boinc boinc   1175779 Jun  3 16:37 log.45006595._011824.job.log.1
[2025-06-03 17:50:50] -rw-------. 1 boinc boinc       357 Jun  3 16:38 output.list
[2025-06-03 17:50:50] -rw-r--r--. 1 boinc boinc       620 Jun  3 16:38 runtime_log
[2025-06-03 17:50:50] -rw-------. 1 boinc boinc   1587200 Jun  3 16:38 result.tar.gz
[2025-06-03 17:50:50] -rw-------. 1 boinc boinc       656 Jun  3 16:38 v6lKDmESRg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwcWKDmjkKsSo.diag
[2025-06-03 17:50:50] -rw-r--r--. 1 boinc boinc      8659 Jun  3 16:38 runtime_log.err
[2025-06-03 17:50:50] -rw-r--r--. 1 boinc boinc      8192 Jun  3 17:50 boinc_mmap_file
[2025-06-03 17:50:50] -rw-r--r--. 1 boinc boinc        28 Jun  3 17:50 wrapper_checkpoint.txt
[2025-06-03 17:50:50] -rw-r--r--. 1 boinc boinc     20556 Jun  3 17:50 stderr.txt
[2025-06-03 17:50:50] HITS file was successfully produced:
[2025-06-03 17:50:50] -rw-------. 1 boinc boinc 175348794 Jun  3 16:34 shared/HITS.pool.root.1
[2025-06-03 17:50:50]  *** Contents of shared directory: ***
[2025-06-03 17:50:50] total 383872
[2025-06-03 17:50:50] -rw-r--r--. 2 boinc boinc 215615705 Jun  3 12:24 ATLAS.root_0
[2025-06-03 17:50:50] -rw-r--r--. 2 boinc boinc     15093 Jun  3 12:24 start_atlas.sh
[2025-06-03 17:50:50] -rw-r--r--. 2 boinc boinc    508871 Jun  3 12:24 input.tar.gz
[2025-06-03 17:50:50] -rw-------. 1 boinc boinc 175348794 Jun  3 16:34 HITS.pool.root.1
[2025-06-03 17:50:50] -rw-------. 1 boinc boinc   1587200 Jun  3 16:38 result.tar.gz
17:50:52 (18861): run_atlas exited; CPU time 48739.654134
17:50:52 (18861): called boinc_finish(0)

</stderr_txt>
]]>

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