Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:17:51 (14095): wrapper (7.7.26015): starting
09:17:51 (14095): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 09:17:51] Arguments: --nthreads 8
[2025-06-03 09:17:51] Threads: 8
[2025-06-03 09:17:51] Checking for CVMFS
[2025-06-03 09:17:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:17:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:17:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:17:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:17:52] 2.11.2.0 16765 31473 90896 146731 1 114 23729725 25165825 4362 130560 0 14784331 99.785 18108899 2028 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 09:17:52] CVMFS is ok
[2025-06-03 09:17:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:17:52] Checking for apptainer binary...
[2025-06-03 09:17:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:17:52] Running /usr/bin/apptainer --version
[2025-06-03 09:17:52] apptainer version 1.3.2-1.el7
[2025-06-03 09:17:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:17:54] cg-vwn404.simple-grid.lan
[2025-06-03 09:17:54] apptainer works
[2025-06-03 09:17:54] Set ATHENA_PROC_NUMBER=8
[2025-06-03 09:17:54] Set ATHENA_CORE_NUMBER=8
[2025-06-03 09:17:54] Starting ATLAS job with PandaID=6677400537
[2025-06-03 09:17:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:22:12]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:22:12] 2025-06-03 11:06:29,189 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:22:12] 2025-06-03 11:06:29,190 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:22:12] 2025-06-03 11:06:29,190 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:22:12] 2025-06-03 11:06:29,195 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:22:12] 2025-06-03 11:06:29,196 | INFO     | sum of square deviations: 3346927870.0
[2025-06-03 13:22:12] 2025-06-03 11:06:29,198 | INFO     | sum of deviations: 28043773756.00001
[2025-06-03 13:22:12] 2025-06-03 11:06:29,198 | INFO     | mean x: 1748941859.0
[2025-06-03 13:22:12] 2025-06-03 11:06:29,198 | INFO     | mean y: 2455004.9819004526
[2025-06-03 13:22:12] 2025-06-03 11:06:29,198 | INFO     | -- intersect: -14651858356.779934
[2025-06-03 13:22:12] 2025-06-03 11:06:29,198 | INFO     | intersect: -14651858356.779934
[2025-06-03 13:22:12] 2025-06-03 11:06:29,199 | INFO     | chi2: 2.390422666271513
[2025-06-03 13:22:12] 2025-06-03 11:06:29,199 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 13:22:12] 2025-06-03 11:06:29,201 | INFO     | sum of deviations: 41597712584.50001
[2025-06-03 13:22:12] 2025-06-03 11:06:29,201 | INFO     | mean x: 1748941706.5
[2025-06-03 13:22:12] 2025-06-03 11:06:29,201 | INFO     | mean y: 2464129.2268518517
[2025-06-03 13:22:12] 2025-06-03 11:06:29,202 | INFO     | -- intersect: -23279221213.863174
[2025-06-03 13:22:12] 2025-06-03 11:06:29,202 | INFO     | intersect: -23279221213.863174
[2025-06-03 13:22:12] 2025-06-03 11:06:29,210 | INFO     | chi2: 1.6205142221203492
[2025-06-03 13:22:12] 2025-06-03 11:06:29,211 | INFO     | current chi2=1.6205142221203492 (change=32.20804651053768 %)
[2025-06-03 13:22:12] 2025-06-03 11:06:29,211 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 13:22:12] 2025-06-03 11:06:29,213 | INFO     | sum of deviations: 40332802829.00001
[2025-06-03 13:22:12] 2025-06-03 11:06:29,213 | INFO     | mean x: 1748941554.0
[2025-06-03 13:22:12] 2025-06-03 11:06:29,213 | INFO     | mean y: 2463219.2654028437
[2025-06-03 13:22:12] 2025-06-03 11:06:29,213 | INFO     | -- intersect: -24214387511.348457
[2025-06-03 13:22:12] 2025-06-03 11:06:29,213 | INFO     | intersect: -24214387511.348457
[2025-06-03 13:22:12] 2025-06-03 11:06:29,214 | INFO     | chi2: 1.62131039721994
[2025-06-03 13:22:12] 2025-06-03 11:06:29,214 | INFO     | current chi2=1.62131039721994 (change=-0.0491310158666239 %)
[2025-06-03 13:22:12] 2025-06-03 11:06:29,214 | INFO     | right removable region: 210
[2025-06-03 13:22:12] 2025-06-03 11:06:29,215 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 13:22:12] 2025-06-03 11:06:29,216 | INFO     | sum of deviations: -9292845042.0
[2025-06-03 13:22:12] 2025-06-03 11:06:29,217 | INFO     | mean x: 1748942011.5
[2025-06-03 13:22:12] 2025-06-03 11:06:29,217 | INFO     | mean y: 2480418.8518518517
[2025-06-03 13:22:12] 2025-06-03 11:06:29,217 | INFO     | -- intersect: 5203562846.173237
[2025-06-03 13:22:12] 2025-06-03 11:06:29,217 | INFO     | intersect: 5203562846.173237
[2025-06-03 13:22:12] 2025-06-03 11:06:29,217 | INFO     | chi2: 0.8220627725803316
[2025-06-03 13:22:12] 2025-06-03 11:06:29,218 | INFO     | current chi2=0.8220627725803316 (change=65.61014986263694 %)
[2025-06-03 13:22:12] 2025-06-03 11:06:29,218 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 13:22:12] 2025-06-03 11:06:29,220 | INFO     | sum of deviations: -8515924031.999999
[2025-06-03 13:22:12] 2025-06-03 11:06:29,220 | INFO     | mean x: 1748942164.0
[2025-06-03 13:22:12] 2025-06-03 11:06:29,220 | INFO     | mean y: 2479828.1184834125
[2025-06-03 13:22:12] 2025-06-03 11:06:29,220 | INFO     | -- intersect: 5115661124.234664
[2025-06-03 13:22:12] 2025-06-03 11:06:29,220 | INFO     | intersect: 5115661124.234664
[2025-06-03 13:22:12] 2025-06-03 11:06:29,221 | INFO     | chi2: 0.8114333893735399
[2025-06-03 13:22:12] 2025-06-03 11:06:29,221 | INFO     | current chi2=0.8114333893735399 (change=1.2930135704147745 %)
[2025-06-03 13:22:12] 2025-06-03 11:06:29,221 | INFO     | left removable region: 20
[2025-06-03 13:22:12] 2025-06-03 11:06:29,221 | INFO     | sum of square deviations: 2126802667.5
[2025-06-03 13:22:12] 2025-06-03 11:06:29,223 | INFO     | sum of deviations: 4893420579.499998
[2025-06-03 13:22:12] 2025-06-03 11:06:29,223 | INFO     | mean x: 1748942133.5
[2025-06-03 13:22:12] 2025-06-03 11:06:29,223 | INFO     | mean y: 2489617.6052631577
[2025-06-03 13:22:12] 2025-06-03 11:06:29,223 | INFO     | -- intersect: -4021536475.2732067
[2025-06-03 13:22:12] 2025-06-03 11:06:29,223 | INFO     | intersect: -4021536475.2732067
[2025-06-03 13:22:12] 2025-06-03 11:06:29,224 | INFO     | chi2: 0.0007562716863301241
[2025-06-03 13:22:12] 2025-06-03 11:06:29,224 | INFO     | -- intersect: -4021536475.2732067
[2025-06-03 13:22:12] 2025-06-03 11:06:29,224 | INFO     | current memory leak: 2.30 B/s (using 190 data points, chi2=0.00)
[2025-06-03 13:22:12] 2025-06-03 11:06:29,225 | INFO     | ..............................
[2025-06-03 13:22:12] 2025-06-03 11:06:29,225 | INFO     | . Timing measurements:
[2025-06-03 13:22:12] 2025-06-03 11:06:29,225 | INFO     | . get job = 0 s
[2025-06-03 13:22:12] 2025-06-03 11:06:29,225 | INFO     | . initial setup = 2 s
[2025-06-03 13:22:12] 2025-06-03 11:06:29,226 | INFO     | . payload setup = 13 s
[2025-06-03 13:22:12] 2025-06-03 11:06:29,226 | INFO     | . stage-in = 0 s
[2025-06-03 13:22:12] 2025-06-03 11:06:29,226 | INFO     | . payload execution = 13469 s
[2025-06-03 13:22:12] 2025-06-03 11:06:29,226 | INFO     | . stage-out = 104 s
[2025-06-03 13:22:12] 2025-06-03 11:06:29,226 | INFO     | . log creation = 102 s
[2025-06-03 13:22:12] 2025-06-03 11:06:29,226 | INFO     | ..............................
[2025-06-03 13:22:12] 2025-06-03 11:06:29,554 | INFO     | 
[2025-06-03 13:22:12] 2025-06-03 11:06:29,554 | INFO     | job summary report
[2025-06-03 13:22:12] 2025-06-03 11:06:29,555 | INFO     | --------------------------------------------------
[2025-06-03 13:22:12] 2025-06-03 11:06:29,555 | INFO     | PanDA job id: 6677400537
[2025-06-03 13:22:12] 2025-06-03 11:06:29,555 | INFO     | task id: 45006595
[2025-06-03 13:22:12] 2025-06-03 11:06:29,555 | INFO     | errors: (none)
[2025-06-03 13:22:12] 2025-06-03 11:06:29,555 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:22:12] 2025-06-03 11:06:29,555 | INFO     | pilot state: finished 
[2025-06-03 13:22:12] 2025-06-03 11:06:29,555 | INFO     | transexitcode: 0
[2025-06-03 13:22:12] 2025-06-03 11:06:29,555 | INFO     | exeerrorcode: 0
[2025-06-03 13:22:12] 2025-06-03 11:06:29,555 | INFO     | exeerrordiag: 
[2025-06-03 13:22:12] 2025-06-03 11:06:29,555 | INFO     | exitcode: 0
[2025-06-03 13:22:12] 2025-06-03 11:06:29,556 | INFO     | exitmsg: OK
[2025-06-03 13:22:12] 2025-06-03 11:06:29,556 | INFO     | cpuconsumptiontime: 50999 s
[2025-06-03 13:22:12] 2025-06-03 11:06:29,556 | INFO     | nevents: 400
[2025-06-03 13:22:12] 2025-06-03 11:06:29,556 | INFO     | neventsw: 0
[2025-06-03 13:22:12] 2025-06-03 11:06:29,556 | INFO     | pid: 26378
[2025-06-03 13:22:12] 2025-06-03 11:06:29,556 | INFO     | pgrp: 26378
[2025-06-03 13:22:12] 2025-06-03 11:06:29,556 | INFO     | corecount: 8
[2025-06-03 13:22:12] 2025-06-03 11:06:29,556 | INFO     | event service: False
[2025-06-03 13:22:12] 2025-06-03 11:06:29,556 | INFO     | sizes: {0: 2405068, 1: 2405210, 9: 2405416, 12: 2405444, 13486: 2435142, 13592: 2444437, 13676: 2444381}
[2025-06-03 13:22:12] 2025-06-03 11:06:29,556 | INFO     | --------------------------------------------------
[2025-06-03 13:22:12] 2025-06-03 11:06:29,557 | INFO     | 
[2025-06-03 13:22:12] 2025-06-03 11:06:29,557 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 13:22:12] 2025-06-03 11:06:30,076 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,077 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,077 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,077 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,077 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,077 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,077 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,078 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,078 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,078 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,078 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,078 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,078 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,078 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,078 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,078 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,078 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:22:12] 2025-06-03 11:06:30,078 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,079 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:22:12] 2025-06-03 11:06:30,079 | INFO     | job 6677400537 has completed (purged errors)
[2025-06-03 13:22:12] 2025-06-03 11:06:30,079 | INFO     | overall cleanup function is called
[2025-06-03 13:22:12] 2025-06-03 11:06:31,091 | INFO     | --- collectZombieJob: --- 10, [26378]
[2025-06-03 13:22:12] 2025-06-03 11:06:31,091 | INFO     | zombie collector waiting for pid 26378
[2025-06-03 13:22:12] 2025-06-03 11:06:31,129 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:22:12] 2025-06-03 11:06:31,129 | INFO     | collected zombie processes
[2025-06-03 13:22:12] 2025-06-03 11:06:31,129 | INFO     | will attempt to kill all subprocesses of pid=26378
[2025-06-03 13:22:12] 2025-06-03 11:06:31,170 | INFO     | PID=17821 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 13:22:12] 2025-06-03 11:06:31,170 | INFO     | .. there are 9 such processes running
[2025-06-03 13:22:12] 2025-06-03 11:06:31,313 | INFO     | process IDs to be killed: [26378] (in reverse order)
[2025-06-03 13:22:12] 2025-06-03 11:06:32,249 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:22:12] 2025-06-03 11:06:32,249 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:22:12] 2025-06-03 11:06:32,253 | INFO     | did not find any defunct processes belonging to 26378
[2025-06-03 13:22:12] 2025-06-03 11:06:32,257 | INFO     | did not find any defunct processes belonging to 26378
[2025-06-03 13:22:12] 2025-06-03 11:06:32,257 | INFO     | ready for new job
[2025-06-03 13:22:12] 2025-06-03 11:06:32,257 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:22:12] 2025-06-03 11:06:32,259 | INFO     | **************************************
[2025-06-03 13:22:12] 2025-06-03 11:06:32,260 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:22:12] 2025-06-03 11:06:32,260 | INFO     | **************************************
[2025-06-03 13:22:12] 2025-06-03 11:06:32,260 | INFO     | 
[2025-06-03 13:22:12] 2025-06-03 11:06:32,261 | INFO     | pilot is running in a VM
[2025-06-03 13:22:12] 2025-06-03 11:06:32,261 | INFO     | architecture information:
[2025-06-03 13:22:12] 2025-06-03 11:06:32,273 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:22:12] 2025-06-03 11:06:32,582 | INFO     | cat /etc/os-release:
[2025-06-03 13:22:12] NAME="CentOS Linux"
[2025-06-03 13:22:12] VERSION="7 (Core)"
[2025-06-03 13:22:12] ID="centos"
[2025-06-03 13:22:12] ID_LIKE="rhel fedora"
[2025-06-03 13:22:12] VERSION_ID="7"
[2025-06-03 13:22:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:22:12] ANSI_COLOR="0;31"
[2025-06-03 13:22:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:22:12] HOME_URL="https://www.centos.org/"
[2025-06-03 13:22:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:22:12] 
[2025-06-03 13:22:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:22:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:22:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:22:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:22:12] 
[2025-06-03 13:22:12] 2025-06-03 11:06:32,582 | INFO     | **************************************
[2025-06-03 13:22:12] 2025-06-03 11:06:33,085 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 13:22:12] 2025-06-03 11:06:33,333 | INFO     | sufficient remaining disk space (496499687424 B)
[2025-06-03 13:22:12] 2025-06-03 11:06:33,333 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:22:12] 2025-06-03 11:06:33,334 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:22:12] 2025-06-03 11:06:33,334 | INFO     | update_server=False
[2025-06-03 13:22:12] 2025-06-03 11:06:33,334 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:22:12] 2025-06-03 11:06:33,335 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:22:12] 2025-06-03 11:06:33,335 | INFO     | aborting loop
[2025-06-03 13:22:12] 2025-06-03 11:06:33,339 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 13:22:12] 2025-06-03 11:06:33,340 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:22:12] 2025-06-03 11:06:33,340 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:22:12] 2025-06-03 11:06:33,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:22:12] 2025-06-03 11:06:33,343 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:22:12] 2025-06-03 11:06:33,489 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:22:12] 2025-06-03 11:06:33,756 | INFO     | all payload control threads have been joined
[2025-06-03 13:22:12] 2025-06-03 11:06:34,340 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:22:12] 2025-06-03 11:06:34,341 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:22:12] 2025-06-03 11:06:34,350 | INFO     | all data control threads have been joined
[2025-06-03 13:22:12] 2025-06-03 11:06:34,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:22:12] 2025-06-03 11:06:34,465 | INFO     | all job control threads have been joined
[2025-06-03 13:22:12] 2025-06-03 11:06:34,488 | INFO     | [job] validate thread has finished
[2025-06-03 13:22:12] 2025-06-03 11:06:34,762 | INFO     | [payload] control thread has finished
[2025-06-03 13:22:12] 2025-06-03 11:06:34,772 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:22:12] 2025-06-03 11:06:34,855 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:22:12] 2025-06-03 11:06:35,050 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:22:12] 2025-06-03 11:06:35,106 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:22:12] 2025-06-03 11:06:35,251 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:22:12] 2025-06-03 11:06:35,356 | INFO     | [data] control thread has finished
[2025-06-03 13:22:12] 2025-06-03 11:06:35,401 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:22:12] 2025-06-03 11:06:35,471 | INFO     | [job] control thread has finished
[2025-06-03 13:22:12] 2025-06-03 11:06:35,496 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:22:12] 2025-06-03 11:06:35,555 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:22:12] 2025-06-03 11:06:35,704 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:22:12] 2025-06-03 11:06:37,352 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:22:12] 2025-06-03 11:06:38,140 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040371025728)>', '<ExcThread(monitor, started 140039942035200)>']
[2025-06-03 13:22:12] 2025-06-03 11:06:38,370 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:22:12] 2025-06-03 11:06:38,370 | INFO     | [monitor] control thread has ended
[2025-06-03 13:22:12] 2025-06-03 11:06:43,166 | INFO     | all workflow threads have been joined
[2025-06-03 13:22:12] 2025-06-03 11:06:43,166 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:22:12] 2025-06-03 11:06:43,167 | INFO     | traces error code: 0
[2025-06-03 13:22:12] 2025-06-03 11:06:43,167 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:22:12] 2025-06-03 11:06:43,569 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:22:12] 2025-06-03 11:06:43,679 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:22:12] 2025-06-03 11:06:43,762 [wrapper] pilotpid: 17821
[2025-06-03 13:22:12] 2025-06-03 11:06:43,812 [wrapper] Pilot exit status: 0
[2025-06-03 13:22:12] 2025-06-03 11:06:44,139 [wrapper] pandaids: 6677400537
[2025-06-03 13:22:12] 2025-06-03 11:06:44,714 [wrapper] cleanup supervisor_pilot 23116 17822
[2025-06-03 13:22:12] 2025-06-03 11:06:44,730 [wrapper] Test setup, not cleaning
[2025-06-03 13:22:12] 2025-06-03 11:06:44,737 [wrapper] apfmon messages muted
[2025-06-03 13:22:12] 2025-06-03 11:06:44,742 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:22:12] 2025-06-03 11:06:44,787 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:22:12]  *** Error codes and diagnostics ***
[2025-06-03 13:22:12]     "exeErrorCode": 0,
[2025-06-03 13:22:12]     "exeErrorDiag": "",
[2025-06-03 13:22:12]     "pilotErrorCode": 0,
[2025-06-03 13:22:12]     "pilotErrorDiag": "",
[2025-06-03 13:22:12]  *** Listing of results directory ***
[2025-06-03 13:22:12] total 395024
[2025-06-03 13:22:12] -rw-r--r--. 1 boinc boinc    495897 Jun  2 22:47 pilot3.tar.gz
[2025-06-03 13:22:12] -rwx------. 1 boinc boinc     37140 Jun  2 22:56 runpilot2-wrapper.sh
[2025-06-03 13:22:12] -rw-r--r--. 1 boinc boinc      5111 Jun  2 22:56 queuedata.json
[2025-06-03 13:22:12] -rw-r--r--. 1 boinc boinc       100 Jun  3 09:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:22:12] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 09:17 run_atlas
[2025-06-03 13:22:12] -rw-r--r--. 1 boinc boinc       105 Jun  3 09:17 job.xml
[2025-06-03 13:22:12] -rw-r--r--. 1 boinc boinc      6392 Jun  3 09:17 init_data.xml
[2025-06-03 13:22:12] -rw-r--r--. 2 boinc boinc 214012453 Jun  3 09:17 EVNT.45006593._000469.pool.root.1
[2025-06-03 13:22:12] -rw-r--r--. 2 boinc boinc     15093 Jun  3 09:17 start_atlas.sh
[2025-06-03 13:22:12] drwxrwx--x. 2 boinc boinc        68 Jun  3 09:17 shared
[2025-06-03 13:22:12] -rw-r--r--. 2 boinc boinc    508876 Jun  3 09:17 input.tar.gz
[2025-06-03 13:22:12] -rw-r--r--. 1 boinc boinc         0 Jun  3 09:17 boinc_lockfile
[2025-06-03 13:22:12] -rw-r--r--. 1 boinc boinc      2524 Jun  3 09:17 pandaJob.out
[2025-06-03 13:22:12] -rw-------. 1 boinc boinc    986901 Jun  3 09:18 agis_schedconf.cvmfs.json
[2025-06-03 13:22:12] drwx------. 4 boinc boinc      4096 Jun  3 09:18 pilot3
[2025-06-03 13:22:12] -rw-------. 1 boinc boinc 183526244 Jun  3 13:01 HITS.45006595._011716.pool.root.1
[2025-06-03 13:22:12] -rw-r--r--. 1 boinc boinc       531 Jun  3 13:02 boinc_task_state.xml
[2025-06-03 13:22:12] -rw-------. 1 boinc boinc      1032 Jun  3 13:03 memory_monitor_summary.json
[2025-06-03 13:22:12] -rw-------. 1 boinc boinc   1603667 Jun  3 13:03 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:22:12] -rw-------. 1 boinc boinc    383124 Jun  3 13:05 log.45006595._011716.job.log.tgz.1
[2025-06-03 13:22:12] -rw-------. 1 boinc boinc        95 Jun  3 13:05 pilot_heartbeat.json
[2025-06-03 13:22:12] -rw-------. 1 boinc boinc      7690 Jun  3 13:06 heartbeat.json
[2025-06-03 13:22:12] -rw-------. 1 boinc boinc      4539 Jun  3 13:06 pilotlog.txt
[2025-06-03 13:22:12] -rw-------. 1 boinc boinc   1188421 Jun  3 13:06 log.45006595._011716.job.log.1
[2025-06-03 13:22:12] -rw-------. 1 boinc boinc       357 Jun  3 13:06 output.list
[2025-06-03 13:22:12] -rw-r--r--. 1 boinc boinc       620 Jun  3 13:06 runtime_log
[2025-06-03 13:22:12] -rw-------. 1 boinc boinc   1587200 Jun  3 13:06 result.tar.gz
[2025-06-03 13:22:12] -rw-r--r--. 1 boinc boinc      8659 Jun  3 13:06 runtime_log.err
[2025-06-03 13:22:12] -rw-------. 1 boinc boinc       657 Jun  3 13:06 JE5NDmEORg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0bWKDm1oBTZn.diag
[2025-06-03 13:22:12] -rw-r--r--. 1 boinc boinc      8192 Jun  3 13:22 boinc_mmap_file
[2025-06-03 13:22:12] -rw-r--r--. 1 boinc boinc        28 Jun  3 13:22 wrapper_checkpoint.txt
[2025-06-03 13:22:12] -rw-r--r--. 1 boinc boinc     20582 Jun  3 13:22 stderr.txt
[2025-06-03 13:22:12] HITS file was successfully produced:
[2025-06-03 13:22:12] -rw-------. 1 boinc boinc 183526244 Jun  3 13:01 shared/HITS.pool.root.1
[2025-06-03 13:22:12]  *** Contents of shared directory: ***
[2025-06-03 13:22:12] total 390296
[2025-06-03 13:22:12] -rw-r--r--. 2 boinc boinc 214012453 Jun  3 09:17 ATLAS.root_0
[2025-06-03 13:22:12] -rw-r--r--. 2 boinc boinc     15093 Jun  3 09:17 start_atlas.sh
[2025-06-03 13:22:12] -rw-r--r--. 2 boinc boinc    508876 Jun  3 09:17 input.tar.gz
[2025-06-03 13:22:12] -rw-------. 1 boinc boinc 183526244 Jun  3 13:01 HITS.pool.root.1
[2025-06-03 13:22:12] -rw-------. 1 boinc boinc   1587200 Jun  3 13:06 result.tar.gz
13:22:14 (14095): run_atlas exited; CPU time 51172.401689
13:22:14 (14095): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN