Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:44:07 (1526922): wrapper (7.7.26015): starting
18:44:07 (1526922): wrapper: running run_atlas (--nthreads 12)
[2025-06-02 18:44:07] Arguments: --nthreads 12
[2025-06-02 18:44:07] Threads: 12
[2025-06-02 18:44:07] Checking for CVMFS
[2025-06-02 18:44:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 18:44:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 18:44:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 18:44:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 18:44:09] 2.11.5.0 2016779 31050 192724 146725 1 219 44178287 45568001 12992 130560 0 323043933 99.802 202837528 18041 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-02 18:44:09] CVMFS is ok
[2025-06-02 18:44:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 18:44:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 18:44:09] Further information can be found at the LHC@home message board.
[2025-06-02 18:44:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 18:44:09] Checking for apptainer binary...
[2025-06-02 18:44:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 18:44:09] Running /usr/bin/apptainer --version
[2025-06-02 18:44:09] apptainer version 1.4.0-1.el9
[2025-06-02 18:44:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 18:44:10] wns0046.triumf.lcg
[2025-06-02 18:44:10] apptainer works
[2025-06-02 18:44:10] Set ATHENA_PROC_NUMBER=12
[2025-06-02 18:44:10] Set ATHENA_CORE_NUMBER=12
[2025-06-02 18:44:10] Starting ATLAS job with PandaID=6677419453
[2025-06-02 18:44:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 18:49:05]  *** The last 200 lines of the pilot log: ***
[2025-06-02 18:49:05] 2025-06-03 01:48:52,205 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 18:49:05] 2025-06-03 01:48:52,206 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 18:49:05] 2025-06-03 01:48:52,206 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | WARNING  | wrong length of table data, x=[1748915159.0], y=[805.0] (must be same and length>=4)
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | ..............................
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | . Timing measurements:
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | . get job = 0 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | . initial setup = 4 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | . payload setup = 20 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | . stage-in = 0 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | . payload execution = 52 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,216 | INFO     | . stage-out = 0 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,216 | INFO     | . log creation = 0 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,216 | INFO     | ..............................
[2025-06-02 18:49:05] 2025-06-03 01:48:52,216 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 18:49:05] 2025-06-03 01:48:52,217 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677419453/pilotlog.txt
[2025-06-02 18:49:05] 2025-06-03 01:48:52,239 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 18:49:05] - Log from pilotlog.txt -
[2025-06-02 18:49:05] 2025-06-03 01:48:52,204 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-02 18:49:05] 2025-06-03 01:48:52,205 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677419453/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 18:49:05] 2025-06-03 01:48:52,205 | INFO     | extracted standard info from prmon json
[2025-06-02 18:49:05] 2025-06-03 01:48:52,205 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 18:49:05] 2025-06-03 01:48:52,205 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 18:49:05] 2025-06-03 01:48:52,206 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 18:49:05] 2025-06-03 01:48:52,206 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | WARNING  | wrong length of table data, x=[1748915159.0], y=[805.0] (must be same and length>=4)
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | ..............................
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | . Timing measurements:
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | . get job = 0 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | . initial setup = 4 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | . payload setup = 20 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | . stage-in = 0 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | . payload execution = 52 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,216 | INFO     | . stage-out = 0 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,216 | INFO     | . log creation = 0 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,216 | INFO     | ..............................
[2025-06-02 18:49:05] 2025-06-03 01:48:52,216 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 18:49:05] 2025-06-03 01:48:52,217 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677419453/pilotlog.txt
[2025-06-02 18:49:05] 2025-06-03 01:48:52,239 | WARNING  | 
[2025-06-02 18:49:05] [begin log extracts]
[2025-06-02 18:49:05] - Log from pilotlog.txt -
[2025-06-02 18:49:05] 2025-06-03 01:48:52,204 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-02 18:49:05] 2025-06-03 01:48:52,205 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677419453/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 18:49:05] 2025-06-03 01:48:52,205 | INFO     | extracted standard info from prmon json
[2025-06-02 18:49:05] 2025-06-03 01:48:52,205 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 18:49:05] 2025-06-03 01:48:52,205 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 18:49:05] 2025-06-03 01:48:52,206 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 18:49:05] 2025-06-03 01:48:52,206 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | WARNING  | wrong length of table data, x=[1748915159.0], y=[805.0] (must be same and length>=4)
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | ..............................
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | . Timing measurements:
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | . get job = 0 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | . initial setup = 4 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | . payload setup = 20 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | . stage-in = 0 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,207 | INFO     | . payload execution = 52 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,216 | INFO     | . stage-out = 0 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,216 | INFO     | . log creation = 0 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,216 | INFO     | ..............................
[2025-06-02 18:49:05] 2025-06-03 01:48:52,216 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 18:49:05] 2025-06-03 01:48:52,217 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677419453/pilotlog.txt
[2025-06-02 18:49:05] [end log extracts]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,239 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 18:49:05] 2025-06-03 01:48:52,240 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 18:49:05] 2025-06-03 01:48:52,492 | INFO     | 
[2025-06-02 18:49:05] 2025-06-03 01:48:52,493 | INFO     | job summary report
[2025-06-02 18:49:05] 2025-06-03 01:48:52,493 | INFO     | --------------------------------------------------
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | PanDA job id: 6677419453
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | task id: 45006595
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 18:46:30,230 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | pilot state: failed 
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | transexitcode: 65
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | exeerrorcode: 65
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | exitcode: 65
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | cpuconsumptiontime: 18 s
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | nevents: 0
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | neventsw: 0
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | pid: 1542268
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | pgrp: 1542268
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | corecount: 12
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | event service: False
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | sizes: {0: 2405179, 1: 2405179, 12: 2405207, 13: 2405441, 23: 2405497, 76: 2428673, 77: 2433096, 80: 2433096, 210: 2433238}
[2025-06-02 18:49:05] 2025-06-03 01:48:52,494 | INFO     | --------------------------------------------------
[2025-06-02 18:49:05] 2025-06-03 01:48:52,495 | INFO     | 
[2025-06-02 18:49:05] 2025-06-03 01:48:52,495 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 18:49:05] 2025-06-03 01:48:52,618 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,621 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,621 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,621 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,621 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,621 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,621 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,621 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,621 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,621 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,621 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,621 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,621 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,621 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,621 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,621 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,621 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 18:49:05] 2025-06-03 01:48:52,621 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,622 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 18:49:05] 2025-06-03 01:48:52,622 | INFO     | job 6677419453 has completed (purged errors)
[2025-06-02 18:49:05] 2025-06-03 01:48:52,622 | INFO     | overall cleanup function is called
[2025-06-02 18:49:05] 2025-06-03 01:48:53,630 | INFO     | --- collectZombieJob: --- 10, [1542268]
[2025-06-02 18:49:05] 2025-06-03 01:48:53,631 | INFO     | zombie collector waiting for pid 1542268
[2025-06-02 18:49:05] 2025-06-03 01:48:53,631 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 18:49:05] 2025-06-03 01:48:53,631 | INFO     | collected zombie processes
[2025-06-02 18:49:05] 2025-06-03 01:48:53,631 | INFO     | will attempt to kill all subprocesses of pid=1542268
[2025-06-02 18:49:05] 2025-06-03 01:48:53,951 | INFO     | process IDs to be killed: [1542268] (in reverse order)
[2025-06-02 18:49:05] 2025-06-03 01:48:54,092 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 18:49:05] 2025-06-03 01:48:54,093 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 18:49:05] 2025-06-03 01:48:54,167 | INFO     | did not find any defunct processes belonging to 1542268
[2025-06-02 18:49:05] 2025-06-03 01:48:54,191 | INFO     | did not find any defunct processes belonging to 1542268
[2025-06-02 18:49:05] 2025-06-03 01:48:54,191 | INFO     | ready for new job
[2025-06-02 18:49:05] 2025-06-03 01:48:54,191 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 18:49:05] 2025-06-03 01:48:54,193 | INFO     | **************************************
[2025-06-02 18:49:05] 2025-06-03 01:48:54,193 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 18:49:05] 2025-06-03 01:48:54,193 | INFO     | **************************************
[2025-06-02 18:49:05] 2025-06-03 01:48:54,193 | INFO     | 
[2025-06-02 18:49:05] 2025-06-03 01:48:54,196 | INFO     | architecture information:
[2025-06-02 18:49:05] 2025-06-03 01:48:54,197 | INFO     | executing command: cat /etc/os-release
[2025-06-02 18:49:05] 2025-06-03 01:48:54,210 | INFO     | cat /etc/os-release:
[2025-06-02 18:49:05] NAME="CentOS Linux"
[2025-06-02 18:49:05] VERSION="7 (Core)"
[2025-06-02 18:49:05] ID="centos"
[2025-06-02 18:49:05] ID_LIKE="rhel fedora"
[2025-06-02 18:49:05] VERSION_ID="7"
[2025-06-02 18:49:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 18:49:05] ANSI_COLOR="0;31"
[2025-06-02 18:49:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 18:49:05] HOME_URL="https://www.centos.org/"
[2025-06-02 18:49:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 18:49:05] 
[2025-06-02 18:49:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 18:49:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 18:49:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 18:49:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 18:49:05] 
[2025-06-02 18:49:05] 2025-06-03 01:48:54,210 | INFO     | **************************************
[2025-06-02 18:49:05] 2025-06-03 01:48:54,714 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 18:49:05] 2025-06-03 01:48:54,839 | INFO     | sufficient remaining disk space (2018947104768 B)
[2025-06-02 18:49:05] 2025-06-03 01:48:54,839 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 18:49:05] 2025-06-03 01:48:54,839 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 18:49:05] 2025-06-03 01:48:54,840 | INFO     | update_server=False
[2025-06-02 18:49:05] 2025-06-03 01:48:54,840 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 18:49:05] 2025-06-03 01:48:54,840 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 18:49:05] 2025-06-03 01:48:54,917 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 18:49:05] 2025-06-03 01:48:55,099 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-02 18:49:05] 2025-06-03 01:48:55,100 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-02 18:49:05] 2025-06-03 01:48:55,100 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 18:49:05] 2025-06-03 01:48:55,100 | INFO     | will abort loop
[2025-06-02 18:49:05] 2025-06-03 01:48:55,543 | INFO     | all payload control threads have been joined
[2025-06-02 18:49:05] 2025-06-03 01:48:55,866 | INFO     | [job] retrieve thread has finished
[2025-06-02 18:49:05] 2025-06-03 01:48:55,904 | INFO     | all data control threads have been joined
[2025-06-02 18:49:05] 2025-06-03 01:48:55,908 | INFO     | [data] copytool_in thread has finished
[2025-06-02 18:49:05] 2025-06-03 01:48:56,106 | INFO     | [job] job monitor thread has finished
[2025-06-02 18:49:05] 2025-06-03 01:48:56,145 | INFO     | all job control threads have been joined
[2025-06-02 18:49:05] 2025-06-03 01:48:56,295 | INFO     | PID=1531085 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-02 18:49:05] 2025-06-03 01:48:56,296 | INFO     | .. there are 14 such processes running
[2025-06-02 18:49:05] 2025-06-03 01:48:56,296 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 18:49:05] 2025-06-03 01:48:56,296 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 18:49:05] 2025-06-03 01:48:56,296 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 18:49:05] 2025-06-03 01:48:56,358 | INFO     | [payload] failed_post thread has finished
[2025-06-02 18:49:05] 2025-06-03 01:48:56,427 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 18:49:05] 2025-06-03 01:48:56,549 | INFO     | [payload] control thread has finished
[2025-06-02 18:49:05] 2025-06-03 01:48:56,680 | INFO     | [payload] validate_post thread has finished
[2025-06-02 18:49:05] 2025-06-03 01:48:56,700 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 18:49:05] 2025-06-03 01:48:56,759 | INFO     | [job] validate thread has finished
[2025-06-02 18:49:05] 2025-06-03 01:48:56,764 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 18:49:05] 2025-06-03 01:48:56,872 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 18:49:05] 2025-06-03 01:48:56,910 | INFO     | [data] control thread has finished
[2025-06-02 18:49:05] 2025-06-03 01:48:56,924 | INFO     | [data] copytool_out thread has finished
[2025-06-02 18:49:05] 2025-06-03 01:48:57,151 | INFO     | [job] control thread has finished
[2025-06-02 18:49:05] 2025-06-03 01:48:57,506 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 18:49:05] 2025-06-03 01:48:58,513 | INFO     | [job] queue monitor thread has finished
[2025-06-02 18:49:05] 2025-06-03 01:48:58,873 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 18:49:05] 2025-06-03 01:48:59,532 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139770596263744)>', '<ExcThread(monitor, started 139770206332672)>']
[2025-06-02 18:49:05] 2025-06-03 01:49:00,319 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 18:49:05] 2025-06-03 01:49:00,320 | INFO     | [monitor] control thread has ended
[2025-06-02 18:49:05] 2025-06-03 01:49:04,558 | INFO     | all workflow threads have been joined
[2025-06-02 18:49:05] 2025-06-03 01:49:04,559 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 18:49:05] 2025-06-03 01:49:04,559 | INFO     | traces error code: 0
[2025-06-02 18:49:05] 2025-06-03 01:49:04,559 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 18:49:05] 2025-06-03 01:49:04,831 [wrapper] ==== pilot stdout END ====
[2025-06-02 18:49:05] 2025-06-03 01:49:04,834 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 18:49:05] 2025-06-03 01:49:04,836 [wrapper] pilotpid: 1531085
[2025-06-02 18:49:05] 2025-06-03 01:49:04,838 [wrapper] Pilot exit status: 0
[2025-06-02 18:49:05] 2025-06-03 01:49:04,897 [wrapper] pandaids: 6677419453
[2025-06-02 18:49:05] 2025-06-03 01:49:05,017 [wrapper] cleanup supervisor_pilot 1531091 1531086
[2025-06-02 18:49:05] 2025-06-03 01:49:05,020 [wrapper] Test setup, not cleaning
[2025-06-02 18:49:05] 2025-06-03 01:49:05,026 [wrapper] apfmon messages muted
[2025-06-02 18:49:05] 2025-06-03 01:49:05,031 [wrapper] ==== wrapper stdout END ====
[2025-06-02 18:49:05] 2025-06-03 01:49:05,042 [wrapper] ==== wrapper stderr END ====
[2025-06-02 18:49:05]  *** Error codes and diagnostics ***
[2025-06-02 18:49:05]     "exeErrorCode": 65,
[2025-06-02 18:49:05]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 18:49:05]     "pilotErrorCode": 1305,
[2025-06-02 18:49:05]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 18:49:05]  *** Listing of results directory ***
[2025-06-02 18:49:05] total 214992
[2025-06-02 18:49:05] -rwx------. 1 boinc boinc     37140 Jun  2 16:14 runpilot2-wrapper.sh
[2025-06-02 18:49:05] -rw-r--r--. 1 boinc boinc      5111 Jun  2 16:14 queuedata.json
[2025-06-02 18:49:05] -rw-r--r--. 1 boinc boinc    495897 Jun  2 16:14 pilot3.tar.gz
[2025-06-02 18:49:05] -rw-r--r--. 1 boinc boinc       100 Jun  2 18:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 18:49:05] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 18:44 run_atlas
[2025-06-02 18:49:05] -rw-r--r--. 1 boinc boinc       105 Jun  2 18:44 job.xml
[2025-06-02 18:49:05] -rw-r--r--. 2 boinc boinc 216111470 Jun  2 18:44 EVNT.45006593._000565.pool.root.1
[2025-06-02 18:49:05] -rw-r--r--. 1 boinc boinc      6602 Jun  2 18:44 init_data.xml
[2025-06-02 18:49:05] -rw-r--r--. 2 boinc boinc     15093 Jun  2 18:44 start_atlas.sh
[2025-06-02 18:49:05] drwxrwx--x. 2 boinc boinc      4096 Jun  2 18:44 shared
[2025-06-02 18:49:05] -rw-r--r--. 2 boinc boinc    508868 Jun  2 18:44 input.tar.gz
[2025-06-02 18:49:05] -rw-r--r--. 1 boinc boinc         0 Jun  2 18:44 boinc_lockfile
[2025-06-02 18:49:05] -rw-r--r--. 1 boinc boinc      2524 Jun  2 18:44 pandaJob.out
[2025-06-02 18:49:05] -rw-------. 1 boinc boinc    988073 Jun  2 18:44 agis_schedconf.cvmfs.json
[2025-06-02 18:49:05] -rw-------. 1 boinc boinc   1603667 Jun  2 18:44 agis_ddmendpoints.agis.ALL.json
[2025-06-02 18:49:05] drwx------. 4 boinc boinc      4096 Jun  2 18:44 pilot3
[2025-06-02 18:49:05] -rw-r--r--. 1 boinc boinc       523 Jun  2 18:46 boinc_task_state.xml
[2025-06-02 18:49:05] -rw-------. 1 boinc boinc       960 Jun  2 18:46 memory_monitor_summary.json
[2025-06-02 18:49:05] -rw-------. 1 boinc boinc     21072 Jun  2 18:46 log.45006595._014123.job.log.tgz.1
[2025-06-02 18:49:05] -rw-------. 1 boinc boinc        95 Jun  2 18:48 pilot_heartbeat.json
[2025-06-02 18:49:05] -rw-------. 1 boinc boinc      8322 Jun  2 18:48 heartbeat.json
[2025-06-02 18:49:05] -rw-r--r--. 1 boinc boinc      8192 Jun  2 18:49 boinc_mmap_file
[2025-06-02 18:49:05] -rw-r--r--. 1 boinc boinc        22 Jun  2 18:49 wrapper_checkpoint.txt
[2025-06-02 18:49:05] -rw-------. 1 boinc boinc      4933 Jun  2 18:49 pilotlog.txt
[2025-06-02 18:49:05] -rw-------. 1 boinc boinc     79043 Jun  2 18:49 log.45006595._014123.job.log.1
[2025-06-02 18:49:05] -rw-------. 1 boinc boinc       188 Jun  2 18:49 output.list
[2025-06-02 18:49:05] -rw-r--r--. 1 boinc boinc       620 Jun  2 18:49 runtime_log
[2025-06-02 18:49:05] -rw-------. 1 boinc boinc    122880 Jun  2 18:49 result.tar.gz
[2025-06-02 18:49:05] -rw-------. 1 boinc boinc       645 Jun  2 18:49 wQTKDmlXTg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmY6gKDmR58Fdn.diag
[2025-06-02 18:49:05] -rw-r--r--. 1 boinc boinc      8484 Jun  2 18:49 runtime_log.err
[2025-06-02 18:49:05] -rw-r--r--. 1 boinc boinc     21741 Jun  2 18:49 stderr.txt
[2025-06-02 18:49:05] No HITS result produced
[2025-06-02 18:49:05]  *** Contents of shared directory: ***
[2025-06-02 18:49:05] total 211684
[2025-06-02 18:49:05] -rw-r--r--. 2 boinc boinc 216111470 Jun  2 18:44 ATLAS.root_0
[2025-06-02 18:49:05] -rw-r--r--. 2 boinc boinc     15093 Jun  2 18:44 start_atlas.sh
[2025-06-02 18:49:05] -rw-r--r--. 2 boinc boinc    508868 Jun  2 18:44 input.tar.gz
[2025-06-02 18:49:05] -rw-------. 1 boinc boinc    122880 Jun  2 18:49 result.tar.gz
18:49:07 (1526922): run_atlas exited; CPU time 26.192633
18:49:07 (1526922): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN