Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:14:08 (3214150): wrapper (7.7.26015): starting
21:14:08 (3214150): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 21:14:08] Arguments: --nthreads 8
[2025-06-02 21:14:08] Threads: 8
[2025-06-02 21:14:08] Checking for CVMFS
[2025-06-02 21:14:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 21:14:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 21:14:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 21:14:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 21:14:09] 2.12.6.0 4868 35199 287916 146724 3 187 17473228 32935936 9127 16776704 0 306778739 99.689 258130941 22761 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-02 21:14:09] CVMFS is ok
[2025-06-02 21:14:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 21:14:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 21:14:09] Further information can be found at the LHC@home message board.
[2025-06-02 21:14:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 21:14:09] Checking for apptainer binary...
[2025-06-02 21:14:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 21:14:09] Running /usr/bin/apptainer --version
[2025-06-02 21:14:09] apptainer version 1.4.1-1.el9
[2025-06-02 21:14:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 21:14:09] c7-3-34.aglt2.org
[2025-06-02 21:14:09] apptainer works
[2025-06-02 21:14:09] Set ATHENA_PROC_NUMBER=8
[2025-06-02 21:14:09] Set ATHENA_CORE_NUMBER=8
[2025-06-02 21:14:09] Starting ATLAS job with PandaID=6677382411
[2025-06-02 21:14:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 22:15:35]  *** The last 200 lines of the pilot log: ***
[2025-06-02 22:15:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-02 22:15:35]  is_altstaged=None
[2025-06-02 22:15:35]  is_tar=False
[2025-06-02 22:15:35]  lfn=log.45006595._003091.job.log.tgz.1
[2025-06-02 22:15:35]  mtime=0
[2025-06-02 22:15:35]  protocol_id=None
[2025-06-02 22:15:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-02 22:15:35]  replicas=None
[2025-06-02 22:15:35]  scope=mc23_13p6TeV
[2025-06-02 22:15:35]  status=None
[2025-06-02 22:15:35]  status_code=0
[2025-06-02 22:15:35]  storage_token=
[2025-06-02 22:15:35]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6677382411/log.45006595._003091.job.log.tgz.1
[2025-06-02 22:15:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/e8/log.45006595._003091.job.log.tgz.1
[2025-06-02 22:15:35]  workdir=None
[2025-06-02 22:15:35] ]
[2025-06-02 22:15:35] 2025-06-03 02:15:10,640 | INFO     | transferring file log.45006595._003091.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6677382411/log.45006595._003091.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-02 22:15:35] 2025-06-03 02:15:10,640 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6677382411/log.45006595._003091.job.log.tgz.1 /tmp/boinchome/slots/5/log.45006595._003091.job
[2025-06-02 22:15:35] 2025-06-03 02:15:10,663 | INFO     | adding to output.list: log.45006595._003091.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/e8/log.45006595._003091.job.log.tg
[2025-06-02 22:15:35] 2025-06-03 02:15:10,664 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-02 22:15:35] 2025-06-03 02:15:10,664 | INFO     | summary of transferred files:
[2025-06-02 22:15:35] 2025-06-03 02:15:10,664 | INFO     |  -- lfn=log.45006595._003091.job.log.tgz.1, status_code=0, status=transferred
[2025-06-02 22:15:35] 2025-06-03 02:15:10,665 | INFO     | stage-out finished correctly
[2025-06-02 22:15:35] 2025-06-03 02:15:11,562 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-02 22:15:35] 2025-06-03 02:15:12,080 | INFO     | PID=3218548 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-02 22:15:35] 2025-06-03 02:15:12,080 | INFO     | .. there are 12 such processes running
[2025-06-02 22:15:35] 2025-06-03 02:15:12,431 | INFO     | job 6677382411 has state=finished
[2025-06-02 22:15:35] 2025-06-03 02:15:12,432 | INFO     | preparing for final server update for job 6677382411 in state='finished'
[2025-06-02 22:15:35] 2025-06-03 02:15:12,503 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-02 22:15:35] 2025-06-03 02:15:12,504 | INFO     | this job has now completed (state=finished)
[2025-06-02 22:15:35] 2025-06-03 02:15:12,504 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-02 22:15:35] 2025-06-03 02:15:12,504 | INFO     | log transfer has been attempted: DONE
[2025-06-02 22:15:35] 2025-06-03 02:15:12,504 | INFO     | job 6677382411 has finished - writing final server update
[2025-06-02 22:15:35] 2025-06-03 02:15:12,504 | INFO     | total number of processed events: 400 (read)
[2025-06-02 22:15:35] 2025-06-03 02:15:12,522 | INFO     | executing command: lscpu
[2025-06-02 22:15:35] 2025-06-03 02:15:12,614 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-02 22:15:35] 2025-06-03 02:15:14,109 | WARNING  | process 3235170 can no longer be monitored (due to stat problems) - aborting
[2025-06-02 22:15:35] 2025-06-03 02:15:14,110 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6677382411/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 22:15:35] 2025-06-03 02:15:14,369 | INFO     | number of running child processes to parent process 3235170: 1
[2025-06-02 22:15:35] 2025-06-03 02:15:14,369 | INFO     | maximum number of monitored processes: 6
[2025-06-02 22:15:35] 2025-06-03 02:15:15,500 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-02 22:15:35] 2025-06-03 02:15:15,501 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6677382411/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 22:15:35] 2025-06-03 02:15:15,502 | INFO     | extracted standard info from prmon json
[2025-06-02 22:15:35] 2025-06-03 02:15:15,502 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 22:15:35] 2025-06-03 02:15:15,502 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 22:15:35] 2025-06-03 02:15:15,502 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 22:15:35] 2025-06-03 02:15:15,502 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 22:15:35] 2025-06-03 02:15:15,504 | INFO     | fitting pss+swap vs Time
[2025-06-02 22:15:35] 2025-06-03 02:15:15,504 | INFO     | sum of square deviations: 46147842.0
[2025-06-02 22:15:35] 2025-06-03 02:15:15,504 | INFO     | sum of deviations: 7351629902.999999
[2025-06-02 22:15:35] 2025-06-03 02:15:15,504 | INFO     | mean x: 1748915171.0
[2025-06-02 22:15:35] 2025-06-03 02:15:15,504 | INFO     | mean y: 2111435.7735849055
[2025-06-02 22:15:35] 2025-06-03 02:15:15,504 | INFO     | -- intersect: -278610636456.8355
[2025-06-02 22:15:35] 2025-06-03 02:15:15,505 | INFO     | intersect: -278610636456.8355
[2025-06-02 22:15:35] 2025-06-03 02:15:15,505 | INFO     | chi2: 1.1572796665314937
[2025-06-02 22:15:35] 2025-06-03 02:15:15,505 | INFO     | -- intersect: -278610636456.8355
[2025-06-02 22:15:35] 2025-06-03 02:15:15,505 | INFO     | current memory leak: 159.31 B/s (using 53 data points, chi2=1.16)
[2025-06-02 22:15:35] 2025-06-03 02:15:15,505 | INFO     | ..............................
[2025-06-02 22:15:35] 2025-06-03 02:15:15,505 | INFO     | . Timing measurements:
[2025-06-02 22:15:35] 2025-06-03 02:15:15,505 | INFO     | . get job = 0 s
[2025-06-02 22:15:35] 2025-06-03 02:15:15,505 | INFO     | . initial setup = 2 s
[2025-06-02 22:15:35] 2025-06-03 02:15:15,505 | INFO     | . payload setup = 4 s
[2025-06-02 22:15:35] 2025-06-03 02:15:15,506 | INFO     | . stage-in = 0 s
[2025-06-02 22:15:35] 2025-06-03 02:15:15,506 | INFO     | . payload execution = 3629 s
[2025-06-02 22:15:35] 2025-06-03 02:15:15,506 | INFO     | . stage-out = 0 s
[2025-06-02 22:15:35] 2025-06-03 02:15:15,506 | INFO     | . log creation = 0 s
[2025-06-02 22:15:35] 2025-06-03 02:15:15,506 | INFO     | ..............................
[2025-06-02 22:15:35] 2025-06-03 02:15:15,586 | INFO     | 
[2025-06-02 22:15:35] 2025-06-03 02:15:15,586 | INFO     | job summary report
[2025-06-02 22:15:35] 2025-06-03 02:15:15,586 | INFO     | --------------------------------------------------
[2025-06-02 22:15:35] 2025-06-03 02:15:15,586 | INFO     | PanDA job id: 6677382411
[2025-06-02 22:15:35] 2025-06-03 02:15:15,586 | INFO     | task id: 45006595
[2025-06-02 22:15:35] 2025-06-03 02:15:15,586 | INFO     | errors: (none)
[2025-06-02 22:15:35] 2025-06-03 02:15:15,587 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 22:15:35] 2025-06-03 02:15:15,587 | INFO     | pilot state: finished 
[2025-06-02 22:15:35] 2025-06-03 02:15:15,587 | INFO     | transexitcode: 0
[2025-06-02 22:15:35] 2025-06-03 02:15:15,587 | INFO     | exeerrorcode: 0
[2025-06-02 22:15:35] 2025-06-03 02:15:15,587 | INFO     | exeerrordiag: 
[2025-06-02 22:15:35] 2025-06-03 02:15:15,587 | INFO     | exitcode: 0
[2025-06-02 22:15:35] 2025-06-03 02:15:15,587 | INFO     | exitmsg: OK
[2025-06-02 22:15:35] 2025-06-03 02:15:15,587 | INFO     | cpuconsumptiontime: 24089 s
[2025-06-02 22:15:35] 2025-06-03 02:15:15,587 | INFO     | nevents: 400
[2025-06-02 22:15:35] 2025-06-03 02:15:15,587 | INFO     | neventsw: 0
[2025-06-02 22:15:35] 2025-06-03 02:15:15,587 | INFO     | pid: 3235170
[2025-06-02 22:15:35] 2025-06-03 02:15:15,587 | INFO     | pgrp: 3235170
[2025-06-02 22:15:35] 2025-06-03 02:15:15,588 | INFO     | corecount: 8
[2025-06-02 22:15:35] 2025-06-03 02:15:15,588 | INFO     | event service: False
[2025-06-02 22:15:35] 2025-06-03 02:15:15,588 | INFO     | sizes: {0: 2405177, 3: 2405383, 11: 2405411, 3638: 2431043, 3639: 2431042, 3640: 2440039, 3641: 2440223, 3645: 2440393}
[2025-06-02 22:15:35] 2025-06-03 02:15:15,588 | INFO     | --------------------------------------------------
[2025-06-02 22:15:35] 2025-06-03 02:15:15,588 | INFO     | 
[2025-06-02 22:15:35] 2025-06-03 02:15:15,588 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-06-02 22:15:35] 2025-06-03 02:15:15,610 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,611 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 22:15:35] 2025-06-03 02:15:15,612 | INFO     | job 6677382411 has completed (purged errors)
[2025-06-02 22:15:35] 2025-06-03 02:15:15,612 | INFO     | overall cleanup function is called
[2025-06-02 22:15:35] 2025-06-03 02:15:16,619 | INFO     | --- collectZombieJob: --- 10, [3235170]
[2025-06-02 22:15:35] 2025-06-03 02:15:16,619 | INFO     | zombie collector waiting for pid 3235170
[2025-06-02 22:15:35] 2025-06-03 02:15:16,619 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 22:15:35] 2025-06-03 02:15:16,619 | INFO     | collected zombie processes
[2025-06-02 22:15:35] 2025-06-03 02:15:16,619 | INFO     | will attempt to kill all subprocesses of pid=3235170
[2025-06-02 22:15:35] 2025-06-03 02:15:17,017 | INFO     | process IDs to be killed: [3235170] (in reverse order)
[2025-06-02 22:15:35] 2025-06-03 02:15:17,142 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 22:15:35] 2025-06-03 02:15:17,143 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 22:15:35] 2025-06-03 02:15:17,160 | INFO     | did not find any defunct processes belonging to 3235170
[2025-06-02 22:15:35] 2025-06-03 02:15:17,174 | INFO     | did not find any defunct processes belonging to 3235170
[2025-06-02 22:15:35] 2025-06-03 02:15:17,174 | INFO     | ready for new job
[2025-06-02 22:15:35] 2025-06-03 02:15:17,174 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 22:15:35] 2025-06-03 02:15:17,176 | INFO     | **************************************
[2025-06-02 22:15:35] 2025-06-03 02:15:17,176 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 22:15:35] 2025-06-03 02:15:17,176 | INFO     | **************************************
[2025-06-02 22:15:35] 2025-06-03 02:15:17,176 | INFO     | 
[2025-06-02 22:15:35] 2025-06-03 02:15:17,194 | INFO     | architecture information:
[2025-06-02 22:15:35] 2025-06-03 02:15:17,195 | INFO     | executing command: cat /etc/os-release
[2025-06-02 22:15:35] 2025-06-03 02:15:17,212 | INFO     | cat /etc/os-release:
[2025-06-02 22:15:35] NAME="CentOS Linux"
[2025-06-02 22:15:35] VERSION="7 (Core)"
[2025-06-02 22:15:35] ID="centos"
[2025-06-02 22:15:35] ID_LIKE="rhel fedora"
[2025-06-02 22:15:35] VERSION_ID="7"
[2025-06-02 22:15:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 22:15:35] ANSI_COLOR="0;31"
[2025-06-02 22:15:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 22:15:35] HOME_URL="https://www.centos.org/"
[2025-06-02 22:15:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 22:15:35] 
[2025-06-02 22:15:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 22:15:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 22:15:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 22:15:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 22:15:35] 
[2025-06-02 22:15:35] 2025-06-03 02:15:17,213 | INFO     | **************************************
[2025-06-02 22:15:35] 2025-06-03 02:15:17,715 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-06-02 22:15:35] 2025-06-03 02:15:17,734 | INFO     | sufficient remaining disk space (70605864960 B)
[2025-06-02 22:15:35] 2025-06-03 02:15:17,734 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 22:15:35] 2025-06-03 02:15:17,735 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 22:15:35] 2025-06-03 02:15:17,735 | INFO     | update_server=False
[2025-06-02 22:15:35] 2025-06-03 02:15:17,735 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 22:15:35] 2025-06-03 02:15:17,735 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 22:15:35] 2025-06-03 02:15:17,877 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 22:15:35] 2025-06-03 02:15:17,878 | INFO     | aborting loop
[2025-06-02 22:15:35] 2025-06-03 02:15:18,096 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 22:15:35] 2025-06-03 02:15:18,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 22:15:35] 2025-06-03 02:15:18,096 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 22:15:35] 2025-06-03 02:15:18,207 | INFO     | all job control threads have been joined
[2025-06-02 22:15:35] 2025-06-03 02:15:18,539 | INFO     | all data control threads have been joined
[2025-06-02 22:15:35] 2025-06-03 02:15:18,740 | INFO     | [job] retrieve thread has finished
[2025-06-02 22:15:35] 2025-06-03 02:15:18,759 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 22:15:35] 2025-06-03 02:15:18,768 | INFO     | [payload] validate_post thread has finished
[2025-06-02 22:15:35] 2025-06-03 02:15:18,799 | INFO     | [job] validate thread has finished
[2025-06-02 22:15:35] 2025-06-03 02:15:18,883 | INFO     | [job] job monitor thread has finished
[2025-06-02 22:15:35] 2025-06-03 02:15:18,989 | INFO     | [data] copytool_in thread has finished
[2025-06-02 22:15:35] 2025-06-03 02:15:19,005 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 22:15:35] 2025-06-03 02:15:19,121 | INFO     | all payload control threads have been joined
[2025-06-02 22:15:35] 2025-06-03 02:15:19,132 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 22:15:35] 2025-06-03 02:15:19,213 | INFO     | [job] control thread has finished
[2025-06-02 22:15:35] 2025-06-03 02:15:19,379 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 22:15:35] 2025-06-03 02:15:19,544 | INFO     | [data] control thread has finished
[2025-06-02 22:15:35] 2025-06-03 02:15:19,827 | INFO     | [payload] failed_post thread has finished
[2025-06-02 22:15:35] 2025-06-03 02:15:20,126 | INFO     | [payload] control thread has finished
[2025-06-02 22:15:35] 2025-06-03 02:15:20,589 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 22:15:35] 2025-06-03 02:15:20,764 | INFO     | [data] copytool_out thread has finished
[2025-06-02 22:15:35] 2025-06-03 02:15:21,595 | INFO     | [job] queue monitor thread has finished
[2025-06-02 22:15:35] 2025-06-03 02:15:21,741 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 22:15:35] 2025-06-03 02:15:28,591 | INFO     | job.realtimelogging is not enabled
[2025-06-02 22:15:35] 2025-06-03 02:15:29,596 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 22:15:35] 2025-06-03 02:15:30,559 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140298899347264)>', '<ExcThread(monitor, started 140298185336576)>']
[2025-06-02 22:15:35] 2025-06-03 02:15:31,149 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 22:15:35] 2025-06-03 02:15:31,150 | INFO     | [monitor] control thread has ended
[2025-06-02 22:15:35] 2025-06-03 02:15:35,585 | INFO     | all workflow threads have been joined
[2025-06-02 22:15:35] 2025-06-03 02:15:35,585 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 22:15:35] 2025-06-03 02:15:35,585 | INFO     | traces error code: 0
[2025-06-02 22:15:35] 2025-06-03 02:15:35,586 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 22:15:35] 2025-06-03 02:15:35,706 [wrapper] ==== pilot stdout END ====
[2025-06-02 22:15:35] 2025-06-03 02:15:35,710 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 22:15:35] 2025-06-03 02:15:35,713 [wrapper] pilotpid: 3218548
[2025-06-02 22:15:35] 2025-06-03 02:15:35,716 [wrapper] Pilot exit status: 0
[2025-06-02 22:15:35] 2025-06-03 02:15:35,727 [wrapper] pandaids: 6677382411
[2025-06-02 22:15:35] 2025-06-03 02:15:35,823 [wrapper] cleanup supervisor_pilot 3524633 3218549
[2025-06-02 22:15:35] 2025-06-03 02:15:35,828 [wrapper] Test setup, not cleaning
[2025-06-02 22:15:35] 2025-06-03 02:15:35,831 [wrapper] apfmon messages muted
[2025-06-02 22:15:35] 2025-06-03 02:15:35,834 [wrapper] ==== wrapper stdout END ====
[2025-06-02 22:15:35] 2025-06-03 02:15:35,837 [wrapper] ==== wrapper stderr END ====
[2025-06-02 22:15:35]  *** Error codes and diagnostics ***
[2025-06-02 22:15:35]     "exeErrorCode": 0,
[2025-06-02 22:15:35]     "exeErrorDiag": "",
[2025-06-02 22:15:35]     "pilotErrorCode": 0,
[2025-06-02 22:15:35]     "pilotErrorDiag": "",
[2025-06-02 22:15:35]  *** Listing of results directory ***
[2025-06-02 22:15:35] total 392520
[2025-06-02 22:15:35] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 11:59 pilot3.tar.gz
[2025-06-02 22:15:35] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 12:05 queuedata.json
[2025-06-02 22:15:35] -rwx------. 1 boincer umatlas     37140 Jun  2 12:05 runpilot2-wrapper.sh
[2025-06-02 22:15:35] -rw-r--r--. 1 boincer umatlas       100 Jun  2 21:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 22:15:35] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  2 21:14 run_atlas
[2025-06-02 22:15:35] -rw-r--r--. 1 boincer umatlas       105 Jun  2 21:14 job.xml
[2025-06-02 22:15:35] -rw-r--r--. 2 boincer umatlas 217777821 Jun  2 21:14 EVNT.45006593._000124.pool.root.1
[2025-06-02 22:15:35] -rw-r--r--. 2 boincer umatlas     15093 Jun  2 21:14 start_atlas.sh
[2025-06-02 22:15:35] drwxrwx--x. 2 boincer umatlas      4096 Jun  2 21:14 shared
[2025-06-02 22:15:35] -rw-r--r--. 2 boincer umatlas    508878 Jun  2 21:14 input.tar.gz
[2025-06-02 22:15:35] -rw-r--r--. 1 boincer umatlas         0 Jun  2 21:14 boinc_lockfile
[2025-06-02 22:15:35] -rw-r--r--. 1 boincer umatlas      2521 Jun  2 21:14 pandaJob.out
[2025-06-02 22:15:35] -rw-------. 1 boincer umatlas    988073 Jun  2 21:14 agis_schedconf.cvmfs.json
[2025-06-02 22:15:35] -rw-------. 1 boincer umatlas   1603667 Jun  2 21:14 agis_ddmendpoints.agis.ALL.json
[2025-06-02 22:15:35] drwx------. 4 boincer umatlas      4096 Jun  2 21:14 pilot3
[2025-06-02 22:15:35] -rw-r--r--. 1 boincer umatlas      6934 Jun  2 22:13 init_data.xml
[2025-06-02 22:15:35] -rw-------. 1 boincer umatlas        95 Jun  2 22:14 pilot_heartbeat.json
[2025-06-02 22:15:35] -rw-------. 1 boincer umatlas 178989389 Jun  2 22:14 HITS.45006595._003091.pool.root.1
[2025-06-02 22:15:35] -rw-r--r--. 1 boincer umatlas       529 Jun  2 22:14 boinc_task_state.xml
[2025-06-02 22:15:35] -rw-------. 1 boincer umatlas      1026 Jun  2 22:15 memory_monitor_summary.json
[2025-06-02 22:15:35] -rw-------. 1 boincer umatlas    298444 Jun  2 22:15 log.45006595._003091.job.log.tgz.1
[2025-06-02 22:15:35] -rw-------. 1 boincer umatlas      7677 Jun  2 22:15 heartbeat.json
[2025-06-02 22:15:35] -rw-------. 1 boincer umatlas      4425 Jun  2 22:15 pilotlog.txt
[2025-06-02 22:15:35] -rw-r--r--. 1 boincer umatlas      8192 Jun  2 22:15 boinc_mmap_file
[2025-06-02 22:15:35] -rw-r--r--. 1 boincer umatlas        27 Jun  2 22:15 wrapper_checkpoint.txt
[2025-06-02 22:15:35] -rw-------. 1 boincer umatlas    369039 Jun  2 22:15 log.45006595._003091.job.log.1
[2025-06-02 22:15:35] -rw-------. 1 boincer umatlas       357 Jun  2 22:15 output.list
[2025-06-02 22:15:35] -rw-r--r--. 1 boincer umatlas       620 Jun  2 22:15 runtime_log
[2025-06-02 22:15:35] -rw-------. 1 boincer umatlas    686080 Jun  2 22:15 result.tar.gz
[2025-06-02 22:15:35] -rw-r--r--. 1 boincer umatlas      8654 Jun  2 22:15 runtime_log.err
[2025-06-02 22:15:35] -rw-------. 1 boincer umatlas       650 Jun  2 22:15 BiBNDmlqMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWHfKDmjfkHym.diag
[2025-06-02 22:15:35] -rw-r--r--. 1 boincer umatlas     21424 Jun  2 22:15 stderr.txt
[2025-06-02 22:15:35] HITS file was successfully produced:
[2025-06-02 22:15:35] -rw-------. 1 boincer umatlas 178989389 Jun  2 22:14 shared/HITS.pool.root.1
[2025-06-02 22:15:35]  *** Contents of shared directory: ***
[2025-06-02 22:15:35] total 388664
[2025-06-02 22:15:35] -rw-r--r--. 2 boincer umatlas 217777821 Jun  2 21:14 ATLAS.root_0
[2025-06-02 22:15:35] -rw-r--r--. 2 boincer umatlas     15093 Jun  2 21:14 start_atlas.sh
[2025-06-02 22:15:35] -rw-r--r--. 2 boincer umatlas    508878 Jun  2 21:14 input.tar.gz
[2025-06-02 22:15:35] -rw-------. 1 boincer umatlas 178989389 Jun  2 22:14 HITS.pool.root.1
[2025-06-02 22:15:35] -rw-------. 1 boincer umatlas    686080 Jun  2 22:15 result.tar.gz
22:15:37 (3214150): run_atlas exited; CPU time 24209.960130
22:15:37 (3214150): called boinc_finish(0)

</stderr_txt>
]]>

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