Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:41:02 (18921): wrapper (7.7.26015): starting
10:41:02 (18921): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 10:41:02] Arguments: --nthreads 8
[2025-06-03 10:41:02] Threads: 8
[2025-06-03 10:41:02] Checking for CVMFS
[2025-06-03 10:41:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:41:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:41:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:41:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:41:04] 2.11.2.0 22417 31529 89620 146735 0 15 21754318 25165824 4635 130560 0 15827140 99.773 18244306 2166 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 10:41:04] CVMFS is ok
[2025-06-03 10:41:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:41:04] Checking for apptainer binary...
[2025-06-03 10:41:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:41:04] Running /usr/bin/apptainer --version
[2025-06-03 10:41:04] apptainer version 1.3.2-1.el7
[2025-06-03 10:41:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:41:10] cg-vwn254.simple-grid.lan
[2025-06-03 10:41:10] apptainer works
[2025-06-03 10:41:10] Set ATHENA_PROC_NUMBER=8
[2025-06-03 10:41:10] Set ATHENA_CORE_NUMBER=8
[2025-06-03 10:41:10] Starting ATLAS job with PandaID=6677394410
[2025-06-03 10:41:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:32:55]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:32:55] 2025-06-03 12:29:58,632 | INFO     | extracted standard info from prmon json
[2025-06-03 14:32:55] 2025-06-03 12:29:58,632 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:32:55] 2025-06-03 12:29:58,632 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:32:55] 2025-06-03 12:29:58,633 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:32:55] 2025-06-03 12:29:58,633 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:32:55] 2025-06-03 12:29:58,637 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:32:55] 2025-06-03 12:29:58,638 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 14:32:55] 2025-06-03 12:29:58,640 | INFO     | sum of deviations: 44168202046.0
[2025-06-03 14:32:55] 2025-06-03 12:29:58,640 | INFO     | mean x: 1748947225.5
[2025-06-03 14:32:55] 2025-06-03 12:29:58,640 | INFO     | mean y: 2447777.113207547
[2025-06-03 14:32:55] 2025-06-03 12:29:58,640 | INFO     | -- intersect: -26143842715.239605
[2025-06-03 14:32:55] 2025-06-03 12:29:58,640 | INFO     | intersect: -26143842715.239605
[2025-06-03 14:32:55] 2025-06-03 12:29:58,641 | INFO     | chi2: 6.5382685513725995
[2025-06-03 14:32:55] 2025-06-03 12:29:58,641 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 14:32:55] 2025-06-03 12:29:58,643 | INFO     | sum of deviations: 56914474247.999886
[2025-06-03 14:32:55] 2025-06-03 12:29:58,643 | INFO     | mean x: 1748947073.0
[2025-06-03 14:32:55] 2025-06-03 12:29:58,643 | INFO     | mean y: 2457098.884057971
[2025-06-03 14:32:55] 2025-06-03 12:29:58,643 | INFO     | -- intersect: -36190166864.68987
[2025-06-03 14:32:55] 2025-06-03 12:29:58,643 | INFO     | intersect: -36190166864.68987
[2025-06-03 14:32:55] 2025-06-03 12:29:58,644 | INFO     | chi2: 5.831693305347206
[2025-06-03 14:32:55] 2025-06-03 12:29:58,644 | INFO     | current chi2=5.831693305347206 (change=10.806763908115402 %)
[2025-06-03 14:32:55] 2025-06-03 12:29:58,644 | INFO     | right removable region: 206
[2025-06-03 14:32:55] 2025-06-03 12:29:58,644 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 14:32:55] 2025-06-03 12:29:58,646 | INFO     | sum of deviations: -27561188420.999996
[2025-06-03 14:32:55] 2025-06-03 12:29:58,646 | INFO     | mean x: 1748947378.0
[2025-06-03 14:32:55] 2025-06-03 12:29:58,646 | INFO     | mean y: 2501305.8599033817
[2025-06-03 14:32:55] 2025-06-03 12:29:58,647 | INFO     | -- intersect: 17529007799.104458
[2025-06-03 14:32:55] 2025-06-03 12:29:58,647 | INFO     | intersect: 17529007799.104458
[2025-06-03 14:32:55] 2025-06-03 12:29:58,647 | INFO     | chi2: 1.9221989182255395
[2025-06-03 14:32:55] 2025-06-03 12:29:58,647 | INFO     | current chi2=1.9221989182255395 (change=70.6007958663306 %)
[2025-06-03 14:32:55] 2025-06-03 12:29:58,648 | INFO     | sum of square deviations: 2555770710.5
[2025-06-03 14:32:55] 2025-06-03 12:29:58,649 | INFO     | sum of deviations: -54469620020.500015
[2025-06-03 14:32:55] 2025-06-03 12:29:58,649 | INFO     | mean x: 1748947530.5
[2025-06-03 14:32:55] 2025-06-03 12:29:58,649 | INFO     | mean y: 2522227.876237624
[2025-06-03 14:32:55] 2025-06-03 12:29:58,649 | INFO     | -- intersect: 37276800014.51294
[2025-06-03 14:32:55] 2025-06-03 12:29:58,649 | INFO     | intersect: 37276800014.51294
[2025-06-03 14:32:55] 2025-06-03 12:29:58,650 | INFO     | chi2: 1.0142089267128533
[2025-06-03 14:32:55] 2025-06-03 12:29:58,650 | INFO     | current chi2=1.0142089267128533 (change=47.237046223649365 %)
[2025-06-03 14:32:55] 2025-06-03 12:29:58,650 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 14:32:55] 2025-06-03 12:29:58,652 | INFO     | sum of deviations: -54365795122.999985
[2025-06-03 14:32:55] 2025-06-03 12:29:58,652 | INFO     | mean x: 1748947683.0
[2025-06-03 14:32:55] 2025-06-03 12:29:58,652 | INFO     | mean y: 2522100.2131979694
[2025-06-03 14:32:55] 2025-06-03 12:29:58,652 | INFO     | -- intersect: 40111043391.88769
[2025-06-03 14:32:55] 2025-06-03 12:29:58,652 | INFO     | intersect: 40111043391.88769
[2025-06-03 14:32:55] 2025-06-03 12:29:58,653 | INFO     | chi2: 0.99293767842284
[2025-06-03 14:32:55] 2025-06-03 12:29:58,653 | INFO     | current chi2=0.99293767842284 (change=2.0973241045072917 %)
[2025-06-03 14:32:55] 2025-06-03 12:29:58,653 | INFO     | left removable region: 30
[2025-06-03 14:32:55] 2025-06-03 12:29:58,653 | INFO     | sum of square deviations: 1690450300.0
[2025-06-03 14:32:55] 2025-06-03 12:29:58,654 | INFO     | sum of deviations: -21477177649.5
[2025-06-03 14:32:55] 2025-06-03 12:29:58,655 | INFO     | mean x: 1748947957.5
[2025-06-03 14:32:55] 2025-06-03 12:29:58,655 | INFO     | mean y: 2516059.403409091
[2025-06-03 14:32:55] 2025-06-03 12:29:58,655 | INFO     | -- intersect: 22222906675.417187
[2025-06-03 14:32:55] 2025-06-03 12:29:58,655 | INFO     | intersect: 22222906675.417187
[2025-06-03 14:32:55] 2025-06-03 12:29:58,655 | INFO     | chi2: 0.1589281421546081
[2025-06-03 14:32:55] 2025-06-03 12:29:58,655 | INFO     | -- intersect: 22222906675.417187
[2025-06-03 14:32:55] 2025-06-03 12:29:58,655 | INFO     | current memory leak: -12.71 B/s (using 176 data points, chi2=0.16)
[2025-06-03 14:32:55] 2025-06-03 12:29:58,656 | INFO     | ..............................
[2025-06-03 14:32:55] 2025-06-03 12:29:58,656 | INFO     | . Timing measurements:
[2025-06-03 14:32:55] 2025-06-03 12:29:58,657 | INFO     | . get job = 0 s
[2025-06-03 14:32:55] 2025-06-03 12:29:58,657 | INFO     | . initial setup = 5 s
[2025-06-03 14:32:55] 2025-06-03 12:29:58,657 | INFO     | . payload setup = 194 s
[2025-06-03 14:32:55] 2025-06-03 12:29:58,657 | INFO     | . stage-in = 0 s
[2025-06-03 14:32:55] 2025-06-03 12:29:58,657 | INFO     | . payload execution = 13048 s
[2025-06-03 14:32:55] 2025-06-03 12:29:58,657 | INFO     | . stage-out = 4 s
[2025-06-03 14:32:55] 2025-06-03 12:29:58,657 | INFO     | . log creation = 1 s
[2025-06-03 14:32:55] 2025-06-03 12:29:58,657 | INFO     | ..............................
[2025-06-03 14:32:55] 2025-06-03 12:29:58,777 | INFO     | 
[2025-06-03 14:32:55] 2025-06-03 12:29:58,778 | INFO     | job summary report
[2025-06-03 14:32:55] 2025-06-03 12:29:58,778 | INFO     | --------------------------------------------------
[2025-06-03 14:32:55] 2025-06-03 12:29:58,778 | INFO     | PanDA job id: 6677394410
[2025-06-03 14:32:55] 2025-06-03 12:29:58,778 | INFO     | task id: 45006595
[2025-06-03 14:32:55] 2025-06-03 12:29:58,778 | INFO     | errors: (none)
[2025-06-03 14:32:55] 2025-06-03 12:29:58,778 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:32:55] 2025-06-03 12:29:58,778 | INFO     | pilot state: finished 
[2025-06-03 14:32:55] 2025-06-03 12:29:58,778 | INFO     | transexitcode: 0
[2025-06-03 14:32:55] 2025-06-03 12:29:58,778 | INFO     | exeerrorcode: 0
[2025-06-03 14:32:55] 2025-06-03 12:29:58,779 | INFO     | exeerrordiag: 
[2025-06-03 14:32:55] 2025-06-03 12:29:58,779 | INFO     | exitcode: 0
[2025-06-03 14:32:55] 2025-06-03 12:29:58,779 | INFO     | exitmsg: OK
[2025-06-03 14:32:55] 2025-06-03 12:29:58,779 | INFO     | cpuconsumptiontime: 48383 s
[2025-06-03 14:32:55] 2025-06-03 12:29:58,779 | INFO     | nevents: 400
[2025-06-03 14:32:55] 2025-06-03 12:29:58,779 | INFO     | neventsw: 0
[2025-06-03 14:32:55] 2025-06-03 12:29:58,779 | INFO     | pid: 1946
[2025-06-03 14:32:55] 2025-06-03 12:29:58,779 | INFO     | pgrp: 1946
[2025-06-03 14:32:55] 2025-06-03 12:29:58,779 | INFO     | corecount: 8
[2025-06-03 14:32:55] 2025-06-03 12:29:58,779 | INFO     | event service: False
[2025-06-03 14:32:55] 2025-06-03 12:29:58,779 | INFO     | sizes: {0: 2405177, 1: 2405205, 12: 2405205, 22: 2405233, 33: 2405261, 44: 2405317, 54: 2405473, 65: 2405501, 76: 2405529, 85: 2405791, 87: 2405819, 13247: 2435342
[2025-06-03 14:32:55] 2025-06-03 12:29:58,780 | INFO     | --------------------------------------------------
[2025-06-03 14:32:55] 2025-06-03 12:29:58,780 | INFO     | 
[2025-06-03 14:32:55] 2025-06-03 12:29:58,780 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-03 14:32:55] 2025-06-03 12:29:59,065 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,066 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,066 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,066 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,066 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,066 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,066 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,066 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,066 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,066 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,067 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,067 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,067 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,067 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,067 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,067 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,067 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,067 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:32:55] 2025-06-03 12:29:59,067 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,067 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:32:55] 2025-06-03 12:29:59,067 | INFO     | job 6677394410 has completed (purged errors)
[2025-06-03 14:32:55] 2025-06-03 12:29:59,068 | INFO     | overall cleanup function is called
[2025-06-03 14:32:55] 2025-06-03 12:30:00,077 | INFO     | --- collectZombieJob: --- 10, [1946]
[2025-06-03 14:32:55] 2025-06-03 12:30:00,077 | INFO     | zombie collector waiting for pid 1946
[2025-06-03 14:32:55] 2025-06-03 12:30:00,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:32:55] 2025-06-03 12:30:00,077 | INFO     | collected zombie processes
[2025-06-03 14:32:55] 2025-06-03 12:30:00,077 | INFO     | will attempt to kill all subprocesses of pid=1946
[2025-06-03 14:32:55] 2025-06-03 12:30:00,200 | INFO     | process IDs to be killed: [1946] (in reverse order)
[2025-06-03 14:32:55] 2025-06-03 12:30:01,137 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:32:55] 2025-06-03 12:30:01,138 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:32:55] 2025-06-03 12:30:01,141 | INFO     | did not find any defunct processes belonging to 1946
[2025-06-03 14:32:55] 2025-06-03 12:30:01,144 | INFO     | did not find any defunct processes belonging to 1946
[2025-06-03 14:32:55] 2025-06-03 12:30:01,145 | INFO     | ready for new job
[2025-06-03 14:32:55] 2025-06-03 12:30:01,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:32:55] 2025-06-03 12:30:01,147 | INFO     | **************************************
[2025-06-03 14:32:55] 2025-06-03 12:30:01,147 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:32:55] 2025-06-03 12:30:01,147 | INFO     | **************************************
[2025-06-03 14:32:55] 2025-06-03 12:30:01,147 | INFO     | 
[2025-06-03 14:32:55] 2025-06-03 12:30:01,148 | INFO     | pilot is running in a VM
[2025-06-03 14:32:55] 2025-06-03 12:30:01,148 | INFO     | architecture information:
[2025-06-03 14:32:55] 2025-06-03 12:30:01,163 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:32:55] 2025-06-03 12:30:01,394 | INFO     | cat /etc/os-release:
[2025-06-03 14:32:55] NAME="CentOS Linux"
[2025-06-03 14:32:55] VERSION="7 (Core)"
[2025-06-03 14:32:55] ID="centos"
[2025-06-03 14:32:55] ID_LIKE="rhel fedora"
[2025-06-03 14:32:55] VERSION_ID="7"
[2025-06-03 14:32:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:32:55] ANSI_COLOR="0;31"
[2025-06-03 14:32:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:32:55] HOME_URL="https://www.centos.org/"
[2025-06-03 14:32:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:32:55] 
[2025-06-03 14:32:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:32:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:32:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:32:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:32:55] 
[2025-06-03 14:32:55] 2025-06-03 12:30:01,395 | INFO     | **************************************
[2025-06-03 14:32:55] 2025-06-03 12:30:01,897 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-03 14:32:55] 2025-06-03 12:30:02,103 | INFO     | sufficient remaining disk space (496270049280 B)
[2025-06-03 14:32:55] 2025-06-03 12:30:02,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:32:55] 2025-06-03 12:30:02,104 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:32:55] 2025-06-03 12:30:02,104 | INFO     | update_server=False
[2025-06-03 14:32:55] 2025-06-03 12:30:02,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:32:55] 2025-06-03 12:30:02,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:32:55] 2025-06-03 12:30:02,106 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 14:32:55] 2025-06-03 12:30:02,106 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:32:55] 2025-06-03 12:30:02,106 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:32:55] 2025-06-03 12:30:02,106 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:32:55] 2025-06-03 12:30:02,110 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:32:55] 2025-06-03 12:30:02,332 | INFO     | all data control threads have been joined
[2025-06-03 14:32:55] 2025-06-03 12:30:02,489 | INFO     | all job control threads have been joined
[2025-06-03 14:32:55] 2025-06-03 12:30:02,534 | INFO     | all payload control threads have been joined
[2025-06-03 14:32:55] 2025-06-03 12:30:03,075 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:32:55] 2025-06-03 12:30:03,075 | INFO     | aborting loop
[2025-06-03 14:32:55] 2025-06-03 12:30:03,110 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:32:55] 2025-06-03 12:30:03,198 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:32:55] 2025-06-03 12:30:03,242 | INFO     | [job] validate thread has finished
[2025-06-03 14:32:55] 2025-06-03 12:30:03,338 | INFO     | [data] control thread has finished
[2025-06-03 14:32:55] 2025-06-03 12:30:03,495 | INFO     | [job] control thread has finished
[2025-06-03 14:32:55] 2025-06-03 12:30:03,540 | INFO     | [payload] control thread has finished
[2025-06-03 14:32:55] 2025-06-03 12:30:03,620 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:32:55] 2025-06-03 12:30:03,794 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:32:55] 2025-06-03 12:30:03,880 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:32:55] 2025-06-03 12:30:03,994 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:32:55] 2025-06-03 12:30:04,081 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:32:55] 2025-06-03 12:30:04,115 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:32:55] 2025-06-03 12:30:04,486 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:32:55] 2025-06-03 12:30:04,527 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:32:55] 2025-06-03 12:30:04,570 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:32:55] 2025-06-03 12:30:04,800 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:32:55] 2025-06-03 12:30:06,119 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:32:55] 2025-06-03 12:30:07,517 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995015948096)>', '<ExcThread(monitor, started 139994442225408)>']
[2025-06-03 14:32:55] 2025-06-03 12:30:08,141 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:32:55] 2025-06-03 12:30:08,141 | INFO     | [monitor] control thread has ended
[2025-06-03 14:32:55] 2025-06-03 12:30:12,543 | INFO     | all workflow threads have been joined
[2025-06-03 14:32:55] 2025-06-03 12:30:12,543 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:32:55] 2025-06-03 12:30:12,543 | INFO     | traces error code: 0
[2025-06-03 14:32:55] 2025-06-03 12:30:12,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:32:55] 2025-06-03 12:30:12,822 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:32:55] 2025-06-03 12:30:12,928 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:32:55] 2025-06-03 12:30:12,991 [wrapper] pilotpid: 25749
[2025-06-03 14:32:55] 2025-06-03 12:30:13,106 [wrapper] Pilot exit status: 0
[2025-06-03 14:32:55] 2025-06-03 12:30:13,483 [wrapper] pandaids: 6677394410
[2025-06-03 14:32:55] 2025-06-03 12:30:14,281 [wrapper] cleanup supervisor_pilot 12017 25750
[2025-06-03 14:32:55] 2025-06-03 12:30:14,361 [wrapper] Test setup, not cleaning
[2025-06-03 14:32:55] 2025-06-03 12:30:14,458 [wrapper] apfmon messages muted
[2025-06-03 14:32:55] 2025-06-03 12:30:14,563 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:32:55] 2025-06-03 12:30:14,684 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:32:55]  *** Error codes and diagnostics ***
[2025-06-03 14:32:55]     "exeErrorCode": 0,
[2025-06-03 14:32:55]     "exeErrorDiag": "",
[2025-06-03 14:32:55]     "pilotErrorCode": 0,
[2025-06-03 14:32:55]     "pilotErrorDiag": "",
[2025-06-03 14:32:55]  *** Listing of results directory ***
[2025-06-03 14:32:55] total 391672
[2025-06-03 14:32:55] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:18 pilot3.tar.gz
[2025-06-03 14:32:55] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:20 queuedata.json
[2025-06-03 14:32:55] -rwx------. 1 boinc boinc     37140 Jun  2 21:20 runpilot2-wrapper.sh
[2025-06-03 14:32:55] -rw-r--r--. 1 boinc boinc       100 Jun  3 10:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:32:55] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 10:41 run_atlas
[2025-06-03 14:32:55] -rw-r--r--. 1 boinc boinc       105 Jun  3 10:41 job.xml
[2025-06-03 14:32:55] -rw-r--r--. 1 boinc boinc      6390 Jun  3 10:41 init_data.xml
[2025-06-03 14:32:55] -rw-r--r--. 2 boinc boinc 216233326 Jun  3 10:41 EVNT.45006593._000367.pool.root.1
[2025-06-03 14:32:55] -rw-r--r--. 2 boinc boinc     15093 Jun  3 10:41 start_atlas.sh
[2025-06-03 14:32:55] drwxrwx--x. 2 boinc boinc        68 Jun  3 10:41 shared
[2025-06-03 14:32:55] -rw-r--r--. 2 boinc boinc    508875 Jun  3 10:41 input.tar.gz
[2025-06-03 14:32:55] -rw-r--r--. 1 boinc boinc         0 Jun  3 10:41 boinc_lockfile
[2025-06-03 14:32:55] -rw-r--r--. 1 boinc boinc      2521 Jun  3 10:41 pandaJob.out
[2025-06-03 14:32:55] -rw-------. 1 boinc boinc    985498 Jun  3 10:44 agis_schedconf.cvmfs.json
[2025-06-03 14:32:55] drwx------. 4 boinc boinc      4096 Jun  3 10:44 pilot3
[2025-06-03 14:32:55] -rw-------. 1 boinc boinc 177944069 Jun  3 14:26 HITS.45006595._009172.pool.root.1
[2025-06-03 14:32:55] -rw-r--r--. 1 boinc boinc       531 Jun  3 14:26 boinc_task_state.xml
[2025-06-03 14:32:55] -rw-------. 1 boinc boinc      1016 Jun  3 14:27 memory_monitor_summary.json
[2025-06-03 14:32:55] -rw-------. 1 boinc boinc   1603667 Jun  3 14:28 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:32:55] -rw-------. 1 boinc boinc    386385 Jun  3 14:28 log.45006595._009172.job.log.tgz.1
[2025-06-03 14:32:55] -rw-------. 1 boinc boinc        96 Jun  3 14:29 pilot_heartbeat.json
[2025-06-03 14:32:55] -rw-------. 1 boinc boinc      7691 Jun  3 14:29 heartbeat.json
[2025-06-03 14:32:55] -rw-------. 1 boinc boinc      4539 Jun  3 14:30 pilotlog.txt
[2025-06-03 14:32:55] -rw-------. 1 boinc boinc   1146979 Jun  3 14:30 log.45006595._009172.job.log.1
[2025-06-03 14:32:55] -rw-------. 1 boinc boinc       357 Jun  3 14:30 output.list
[2025-06-03 14:32:55] -rw-r--r--. 1 boinc boinc       620 Jun  3 14:30 runtime_log
[2025-06-03 14:32:55] -rw-------. 1 boinc boinc   1556480 Jun  3 14:30 result.tar.gz
[2025-06-03 14:32:55] -rw-r--r--. 1 boinc boinc      8659 Jun  3 14:30 runtime_log.err
[2025-06-03 14:32:55] -rw-------. 1 boinc boinc       656 Jun  3 14:30 27NNDm7sPg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmgMWKDmw7rhim.diag
[2025-06-03 14:32:55] -rw-r--r--. 1 boinc boinc      8192 Jun  3 14:32 boinc_mmap_file
[2025-06-03 14:32:55] -rw-r--r--. 1 boinc boinc        28 Jun  3 14:32 wrapper_checkpoint.txt
[2025-06-03 14:32:55] -rw-r--r--. 1 boinc boinc     20505 Jun  3 14:32 stderr.txt
[2025-06-03 14:32:55] HITS file was successfully produced:
[2025-06-03 14:32:55] -rw-------. 1 boinc boinc 177944069 Jun  3 14:26 shared/HITS.pool.root.1
[2025-06-03 14:32:55]  *** Contents of shared directory: ***
[2025-06-03 14:32:55] total 386980
[2025-06-03 14:32:55] -rw-r--r--. 2 boinc boinc 216233326 Jun  3 10:41 ATLAS.root_0
[2025-06-03 14:32:55] -rw-r--r--. 2 boinc boinc     15093 Jun  3 10:41 start_atlas.sh
[2025-06-03 14:32:55] -rw-r--r--. 2 boinc boinc    508875 Jun  3 10:41 input.tar.gz
[2025-06-03 14:32:55] -rw-------. 1 boinc boinc 177944069 Jun  3 14:26 HITS.pool.root.1
[2025-06-03 14:32:55] -rw-------. 1 boinc boinc   1556480 Jun  3 14:30 result.tar.gz
14:32:57 (18921): run_atlas exited; CPU time 48568.978424
14:32:57 (18921): called boinc_finish(0)

</stderr_txt>
]]>

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