Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:20:44 (23987): wrapper (7.7.26015): starting
14:20:44 (23987): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:20:44] Arguments: --nthreads 8
[2025-06-03 14:20:44] Threads: 8
[2025-06-03 14:20:44] Checking for CVMFS
[2025-06-03 14:20:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:20:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:20:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:20:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:20:46] 2.11.2.0 31228 31749 96300 146741 1 113 24114059 25165824 4266 130560 0 16547381 99.856 17889929 2175 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 14:20:46] CVMFS is ok
[2025-06-03 14:20:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:20:46] Checking for apptainer binary...
[2025-06-03 14:20:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:20:46] Running /usr/bin/apptainer --version
[2025-06-03 14:20:47] apptainer version 1.3.2-1.el7
[2025-06-03 14:20:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:20:49] cg-vwn446.simple-grid.lan
[2025-06-03 14:20:49] apptainer works
[2025-06-03 14:20:49] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:20:49] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:20:49] Starting ATLAS job with PandaID=6677400327
[2025-06-03 14:20:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:37:40]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:37:40] 2025-06-03 16:09:08,418 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6677400327/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:37:40] 2025-06-03 16:09:08,419 | INFO     | extracted standard info from prmon json
[2025-06-03 18:37:40] 2025-06-03 16:09:08,419 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:37:40] 2025-06-03 16:09:08,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:37:40] 2025-06-03 16:09:08,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:37:40] 2025-06-03 16:09:08,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:37:40] 2025-06-03 16:09:08,425 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:37:40] 2025-06-03 16:09:08,426 | INFO     | sum of square deviations: 3392567795.5
[2025-06-03 18:37:40] 2025-06-03 16:09:08,428 | INFO     | sum of deviations: -50812405341.5
[2025-06-03 18:37:40] 2025-06-03 16:09:08,428 | INFO     | mean x: 1748960070.5
[2025-06-03 18:37:40] 2025-06-03 16:09:08,428 | INFO     | mean y: 2524364.7162162163
[2025-06-03 18:37:40] 2025-06-03 16:09:08,428 | INFO     | -- intersect: 26197687847.144672
[2025-06-03 18:37:40] 2025-06-03 16:09:08,428 | INFO     | intersect: 26197687847.144672
[2025-06-03 18:37:40] 2025-06-03 16:09:08,429 | INFO     | chi2: 2.6150355441595403
[2025-06-03 18:37:40] 2025-06-03 16:09:08,429 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 18:37:40] 2025-06-03 16:09:08,433 | INFO     | sum of deviations: -34499028727.999985
[2025-06-03 18:37:40] 2025-06-03 16:09:08,434 | INFO     | mean x: 1748959918.0
[2025-06-03 18:37:40] 2025-06-03 16:09:08,434 | INFO     | mean y: 2535284.410138249
[2025-06-03 18:37:40] 2025-06-03 16:09:08,434 | INFO     | -- intersect: 19045664851.617615
[2025-06-03 18:37:40] 2025-06-03 16:09:08,434 | INFO     | intersect: 19045664851.617615
[2025-06-03 18:37:40] 2025-06-03 16:09:08,435 | INFO     | chi2: 1.8461487090068323
[2025-06-03 18:37:40] 2025-06-03 16:09:08,435 | INFO     | current chi2=1.8461487090068323 (change=29.402538595314752 %)
[2025-06-03 18:37:40] 2025-06-03 16:09:08,435 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 18:37:40] 2025-06-03 16:09:08,437 | INFO     | sum of deviations: -33049294737.000004
[2025-06-03 18:37:40] 2025-06-03 16:09:08,437 | INFO     | mean x: 1748959765.5
[2025-06-03 18:37:40] 2025-06-03 16:09:08,437 | INFO     | mean y: 2536317.632075472
[2025-06-03 18:37:40] 2025-06-03 16:09:08,437 | INFO     | -- intersect: 19566897475.008644
[2025-06-03 18:37:40] 2025-06-03 16:09:08,438 | INFO     | intersect: 19566897475.008644
[2025-06-03 18:37:40] 2025-06-03 16:09:08,438 | INFO     | chi2: 1.8438692231134932
[2025-06-03 18:37:40] 2025-06-03 16:09:08,438 | INFO     | current chi2=1.8438692231134932 (change=0.12347249613306223 %)
[2025-06-03 18:37:40] 2025-06-03 16:09:08,438 | INFO     | right removable region: 211
[2025-06-03 18:37:40] 2025-06-03 16:09:08,439 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 18:37:40] 2025-06-03 16:09:08,444 | INFO     | sum of deviations: -88177085817.00002
[2025-06-03 18:37:40] 2025-06-03 16:09:08,444 | INFO     | mean x: 1748960223.0
[2025-06-03 18:37:40] 2025-06-03 16:09:08,444 | INFO     | mean y: 2549567.866359447
[2025-06-03 18:37:40] 2025-06-03 16:09:08,444 | INFO     | -- intersect: 48675455003.550064
[2025-06-03 18:37:40] 2025-06-03 16:09:08,444 | INFO     | intersect: 48675455003.550064
[2025-06-03 18:37:40] 2025-06-03 16:09:08,445 | INFO     | chi2: 1.0222287402853552
[2025-06-03 18:37:40] 2025-06-03 16:09:08,445 | INFO     | current chi2=1.0222287402853552 (change=60.90956612163777 %)
[2025-06-03 18:37:40] 2025-06-03 16:09:08,445 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 18:37:40] 2025-06-03 16:09:08,447 | INFO     | sum of deviations: -85032073223.5
[2025-06-03 18:37:40] 2025-06-03 16:09:08,447 | INFO     | mean x: 1748960375.5
[2025-06-03 18:37:40] 2025-06-03 16:09:08,447 | INFO     | mean y: 2547298.966981132
[2025-06-03 18:37:40] 2025-06-03 16:09:08,448 | INFO     | -- intersect: 50339439023.02168
[2025-06-03 18:37:40] 2025-06-03 16:09:08,448 | INFO     | intersect: 50339439023.02168
[2025-06-03 18:37:40] 2025-06-03 16:09:08,448 | INFO     | chi2: 1.010509551295077
[2025-06-03 18:37:40] 2025-06-03 16:09:08,448 | INFO     | current chi2=1.010509551295077 (change=1.146435091133 %)
[2025-06-03 18:37:40] 2025-06-03 16:09:08,448 | INFO     | left removable region: 20
[2025-06-03 18:37:40] 2025-06-03 16:09:08,449 | INFO     | sum of square deviations: 2160561440.0
[2025-06-03 18:37:40] 2025-06-03 16:09:08,450 | INFO     | sum of deviations: -54641735882.0
[2025-06-03 18:37:40] 2025-06-03 16:09:08,451 | INFO     | mean x: 1748960345.0
[2025-06-03 18:37:40] 2025-06-03 16:09:08,451 | INFO     | mean y: 2551497.2931937175
[2025-06-03 18:37:40] 2025-06-03 16:09:08,451 | INFO     | -- intersect: 44234679068.533005
[2025-06-03 18:37:40] 2025-06-03 16:09:08,451 | INFO     | intersect: 44234679068.533005
[2025-06-03 18:37:40] 2025-06-03 16:09:08,451 | INFO     | chi2: 0.20418221771927264
[2025-06-03 18:37:40] 2025-06-03 16:09:08,453 | INFO     | -- intersect: 44234679068.533005
[2025-06-03 18:37:40] 2025-06-03 16:09:08,453 | INFO     | current memory leak: -25.29 B/s (using 191 data points, chi2=0.20)
[2025-06-03 18:37:40] 2025-06-03 16:09:08,454 | INFO     | ..............................
[2025-06-03 18:37:40] 2025-06-03 16:09:08,454 | INFO     | . Timing measurements:
[2025-06-03 18:37:40] 2025-06-03 16:09:08,454 | INFO     | . get job = 0 s
[2025-06-03 18:37:40] 2025-06-03 16:09:08,454 | INFO     | . initial setup = 2 s
[2025-06-03 18:37:40] 2025-06-03 16:09:08,454 | INFO     | . payload setup = 16 s
[2025-06-03 18:37:40] 2025-06-03 16:09:08,454 | INFO     | . stage-in = 0 s
[2025-06-03 18:37:40] 2025-06-03 16:09:08,454 | INFO     | . payload execution = 13547 s
[2025-06-03 18:37:40] 2025-06-03 16:09:08,454 | INFO     | . stage-out = 3 s
[2025-06-03 18:37:40] 2025-06-03 16:09:08,455 | INFO     | . log creation = 0 s
[2025-06-03 18:37:40] 2025-06-03 16:09:08,455 | INFO     | ..............................
[2025-06-03 18:37:40] 2025-06-03 16:09:08,616 | INFO     | 
[2025-06-03 18:37:40] 2025-06-03 16:09:08,616 | INFO     | job summary report
[2025-06-03 18:37:40] 2025-06-03 16:09:08,616 | INFO     | --------------------------------------------------
[2025-06-03 18:37:40] 2025-06-03 16:09:08,616 | INFO     | PanDA job id: 6677400327
[2025-06-03 18:37:40] 2025-06-03 16:09:08,617 | INFO     | task id: 45006595
[2025-06-03 18:37:40] 2025-06-03 16:09:08,617 | INFO     | errors: (none)
[2025-06-03 18:37:40] 2025-06-03 16:09:08,617 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:37:40] 2025-06-03 16:09:08,617 | INFO     | pilot state: finished 
[2025-06-03 18:37:40] 2025-06-03 16:09:08,617 | INFO     | transexitcode: 0
[2025-06-03 18:37:40] 2025-06-03 16:09:08,617 | INFO     | exeerrorcode: 0
[2025-06-03 18:37:40] 2025-06-03 16:09:08,617 | INFO     | exeerrordiag: 
[2025-06-03 18:37:40] 2025-06-03 16:09:08,617 | INFO     | exitcode: 0
[2025-06-03 18:37:40] 2025-06-03 16:09:08,617 | INFO     | exitmsg: OK
[2025-06-03 18:37:40] 2025-06-03 16:09:08,618 | INFO     | cpuconsumptiontime: 50259 s
[2025-06-03 18:37:40] 2025-06-03 16:09:08,618 | INFO     | nevents: 400
[2025-06-03 18:37:40] 2025-06-03 16:09:08,618 | INFO     | neventsw: 0
[2025-06-03 18:37:40] 2025-06-03 16:09:08,618 | INFO     | pid: 3866
[2025-06-03 18:37:40] 2025-06-03 16:09:08,618 | INFO     | pgrp: 3866
[2025-06-03 18:37:40] 2025-06-03 16:09:08,618 | INFO     | corecount: 8
[2025-06-03 18:37:40] 2025-06-03 16:09:08,618 | INFO     | event service: False
[2025-06-03 18:37:40] 2025-06-03 16:09:08,618 | INFO     | sizes: {0: 2405011, 1: 2405210, 8: 2405416, 12: 2405444, 13567: 2435170, 13568: 2435169, 13572: 2444350, 13656: 2444464}
[2025-06-03 18:37:40] 2025-06-03 16:09:08,618 | INFO     | --------------------------------------------------
[2025-06-03 18:37:40] 2025-06-03 16:09:08,619 | INFO     | 
[2025-06-03 18:37:40] 2025-06-03 16:09:08,619 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 18:37:40] 2025-06-03 16:09:09,122 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,123 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,123 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,123 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,123 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,123 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,123 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,124 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,124 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,124 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,124 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,124 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,124 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,124 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,124 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,124 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,124 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:37:40] 2025-06-03 16:09:09,125 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,125 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:37:40] 2025-06-03 16:09:09,125 | INFO     | job 6677400327 has completed (purged errors)
[2025-06-03 18:37:40] 2025-06-03 16:09:09,125 | INFO     | overall cleanup function is called
[2025-06-03 18:37:40] 2025-06-03 16:09:10,133 | INFO     | --- collectZombieJob: --- 10, [3866]
[2025-06-03 18:37:40] 2025-06-03 16:09:10,134 | INFO     | zombie collector waiting for pid 3866
[2025-06-03 18:37:40] 2025-06-03 16:09:10,134 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:37:40] 2025-06-03 16:09:10,134 | INFO     | collected zombie processes
[2025-06-03 18:37:40] 2025-06-03 16:09:10,134 | INFO     | will attempt to kill all subprocesses of pid=3866
[2025-06-03 18:37:40] 2025-06-03 16:09:10,258 | INFO     | process IDs to be killed: [3866] (in reverse order)
[2025-06-03 18:37:40] 2025-06-03 16:09:10,926 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:37:40] 2025-06-03 16:09:10,927 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:37:40] 2025-06-03 16:09:10,930 | INFO     | did not find any defunct processes belonging to 3866
[2025-06-03 18:37:40] 2025-06-03 16:09:10,933 | INFO     | did not find any defunct processes belonging to 3866
[2025-06-03 18:37:40] 2025-06-03 16:09:10,933 | INFO     | ready for new job
[2025-06-03 18:37:40] 2025-06-03 16:09:10,933 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:37:40] 2025-06-03 16:09:10,935 | INFO     | **************************************
[2025-06-03 18:37:40] 2025-06-03 16:09:10,935 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:37:40] 2025-06-03 16:09:10,935 | INFO     | **************************************
[2025-06-03 18:37:40] 2025-06-03 16:09:10,935 | INFO     | 
[2025-06-03 18:37:40] 2025-06-03 16:09:10,936 | INFO     | pilot is running in a VM
[2025-06-03 18:37:40] 2025-06-03 16:09:10,936 | INFO     | architecture information:
[2025-06-03 18:37:40] 2025-06-03 16:09:10,956 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:37:40] 2025-06-03 16:09:11,172 | INFO     | cat /etc/os-release:
[2025-06-03 18:37:40] NAME="CentOS Linux"
[2025-06-03 18:37:40] VERSION="7 (Core)"
[2025-06-03 18:37:40] ID="centos"
[2025-06-03 18:37:40] ID_LIKE="rhel fedora"
[2025-06-03 18:37:40] VERSION_ID="7"
[2025-06-03 18:37:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:37:40] ANSI_COLOR="0;31"
[2025-06-03 18:37:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:37:40] HOME_URL="https://www.centos.org/"
[2025-06-03 18:37:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:37:40] 
[2025-06-03 18:37:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:37:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:37:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:37:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:37:40] 
[2025-06-03 18:37:40] 2025-06-03 16:09:11,172 | INFO     | **************************************
[2025-06-03 18:37:40] 2025-06-03 16:09:11,676 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 18:37:40] 2025-06-03 16:09:11,987 | INFO     | sufficient remaining disk space (496515416064 B)
[2025-06-03 18:37:40] 2025-06-03 16:09:11,988 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:37:40] 2025-06-03 16:09:11,988 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:37:40] 2025-06-03 16:09:11,988 | INFO     | update_server=False
[2025-06-03 18:37:40] 2025-06-03 16:09:11,988 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:37:40] 2025-06-03 16:09:11,988 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:37:40] 2025-06-03 16:09:11,989 | INFO     | aborting loop
[2025-06-03 18:37:40] 2025-06-03 16:09:12,012 | INFO     | all data control threads have been joined
[2025-06-03 18:37:40] 2025-06-03 16:09:12,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:37:40] 2025-06-03 16:09:12,696 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:37:40] 2025-06-03 16:09:12,780 | INFO     | all payload control threads have been joined
[2025-06-03 18:37:40] 2025-06-03 16:09:12,896 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:37:40] 2025-06-03 16:09:12,896 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:37:40] 2025-06-03 16:09:12,896 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:37:40] 2025-06-03 16:09:12,994 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:37:40] 2025-06-03 16:09:12,996 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:37:40] 2025-06-03 16:09:13,019 | INFO     | [data] control thread has finished
[2025-06-03 18:37:40] 2025-06-03 16:09:13,031 | INFO     | [job] validate thread has finished
[2025-06-03 18:37:40] 2025-06-03 16:09:13,122 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:37:40] 2025-06-03 16:09:13,190 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:37:40] 2025-06-03 16:09:13,200 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:37:40] 2025-06-03 16:09:13,245 | INFO     | all job control threads have been joined
[2025-06-03 18:37:40] 2025-06-03 16:09:13,633 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:37:40] 2025-06-03 16:09:13,691 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:37:40] 2025-06-03 16:09:13,707 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:37:40] 2025-06-03 16:09:13,787 | INFO     | [payload] control thread has finished
[2025-06-03 18:37:40] 2025-06-03 16:09:14,120 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:37:40] 2025-06-03 16:09:14,252 | INFO     | [job] control thread has finished
[2025-06-03 18:37:40] 2025-06-03 16:09:14,273 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:37:40] 2025-06-03 16:09:14,639 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:37:40] 2025-06-03 16:09:14,703 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:37:40] 2025-06-03 16:09:16,133 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:37:40] 2025-06-03 16:09:17,051 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139679099074368)>', '<ExcThread(monitor, started 139678443370240)>']
[2025-06-03 18:37:40] 2025-06-03 16:09:17,927 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:37:40] 2025-06-03 16:09:17,928 | INFO     | [monitor] control thread has ended
[2025-06-03 18:37:40] 2025-06-03 16:09:22,076 | INFO     | all workflow threads have been joined
[2025-06-03 18:37:40] 2025-06-03 16:09:22,077 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:37:40] 2025-06-03 16:09:22,077 | INFO     | traces error code: 0
[2025-06-03 18:37:40] 2025-06-03 16:09:22,077 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:37:40] 2025-06-03 16:09:22,462 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:37:40] 2025-06-03 16:09:22,555 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:37:40] 2025-06-03 16:09:22,629 [wrapper] pilotpid: 27681
[2025-06-03 18:37:40] 2025-06-03 16:09:22,681 [wrapper] Pilot exit status: 0
[2025-06-03 18:37:40] 2025-06-03 16:09:22,963 [wrapper] pandaids: 6677400327
[2025-06-03 18:37:40] 2025-06-03 16:09:23,709 [wrapper] cleanup supervisor_pilot 16965 27682
[2025-06-03 18:37:40] 2025-06-03 16:09:23,769 [wrapper] Test setup, not cleaning
[2025-06-03 18:37:40] 2025-06-03 16:09:23,903 [wrapper] apfmon messages muted
[2025-06-03 18:37:40] 2025-06-03 16:09:23,979 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:37:40] 2025-06-03 16:09:24,075 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:37:40]  *** Error codes and diagnostics ***
[2025-06-03 18:37:40]     "exeErrorCode": 0,
[2025-06-03 18:37:40]     "exeErrorDiag": "",
[2025-06-03 18:37:40]     "pilotErrorCode": 0,
[2025-06-03 18:37:40]     "pilotErrorDiag": "",
[2025-06-03 18:37:40]  *** Listing of results directory ***
[2025-06-03 18:37:40] total 392016
[2025-06-03 18:37:40] -rw-r--r--. 1 boinc boinc    495897 Jun  2 22:47 pilot3.tar.gz
[2025-06-03 18:37:40] -rwx------. 1 boinc boinc     37140 Jun  2 22:50 runpilot2-wrapper.sh
[2025-06-03 18:37:40] -rw-r--r--. 1 boinc boinc      5111 Jun  2 22:50 queuedata.json
[2025-06-03 18:37:40] -rw-r--r--. 1 boinc boinc       100 Jun  3 14:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:37:40] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 14:20 run_atlas
[2025-06-03 18:37:40] -rw-r--r--. 1 boinc boinc       105 Jun  3 14:20 job.xml
[2025-06-03 18:37:40] -rw-r--r--. 1 boinc boinc      6392 Jun  3 14:20 init_data.xml
[2025-06-03 18:37:40] -rw-r--r--. 2 boinc boinc 215376377 Jun  3 14:20 EVNT.45006593._000461.pool.root.1
[2025-06-03 18:37:40] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:20 start_atlas.sh
[2025-06-03 18:37:40] drwxrwx--x. 2 boinc boinc        68 Jun  3 14:20 shared
[2025-06-03 18:37:40] -rw-r--r--. 2 boinc boinc    508872 Jun  3 14:20 input.tar.gz
[2025-06-03 18:37:40] -rw-r--r--. 1 boinc boinc         0 Jun  3 14:20 boinc_lockfile
[2025-06-03 18:37:40] -rw-r--r--. 1 boinc boinc      2524 Jun  3 14:20 pandaJob.out
[2025-06-03 18:37:40] -rw-------. 1 boinc boinc    982666 Jun  3 14:21 agis_schedconf.cvmfs.json
[2025-06-03 18:37:40] drwx------. 4 boinc boinc      4096 Jun  3 14:21 pilot3
[2025-06-03 18:37:40] -rw-------. 1 boinc boinc 179119482 Jun  3 18:06 HITS.45006595._011506.pool.root.1
[2025-06-03 18:37:40] -rw-r--r--. 1 boinc boinc       530 Jun  3 18:06 boinc_task_state.xml
[2025-06-03 18:37:40] -rw-------. 1 boinc boinc      1019 Jun  3 18:07 memory_monitor_summary.json
[2025-06-03 18:37:40] -rw-------. 1 boinc boinc   1603667 Jun  3 18:07 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:37:40] -rw-------. 1 boinc boinc    372166 Jun  3 18:07 log.45006595._011506.job.log.tgz.1
[2025-06-03 18:37:40] -rw-------. 1 boinc boinc        95 Jun  3 18:08 pilot_heartbeat.json
[2025-06-03 18:37:40] -rw-------. 1 boinc boinc      7696 Jun  3 18:09 heartbeat.json
[2025-06-03 18:37:40] -rw-------. 1 boinc boinc      4416 Jun  3 18:09 pilotlog.txt
[2025-06-03 18:37:40] -rw-------. 1 boinc boinc   1184982 Jun  3 18:09 log.45006595._011506.job.log.1
[2025-06-03 18:37:40] -rw-------. 1 boinc boinc       357 Jun  3 18:09 output.list
[2025-06-03 18:37:40] -rw-r--r--. 1 boinc boinc       620 Jun  3 18:09 runtime_log
[2025-06-03 18:37:40] -rw-------. 1 boinc boinc   1576960 Jun  3 18:09 result.tar.gz
[2025-06-03 18:37:40] -rw-------. 1 boinc boinc       656 Jun  3 18:09 rWNNDmHIRg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRfgKDmdvP0On.diag
[2025-06-03 18:37:40] -rw-r--r--. 1 boinc boinc      8659 Jun  3 18:09 runtime_log.err
[2025-06-03 18:37:40] -rw-r--r--. 1 boinc boinc      8192 Jun  3 18:37 boinc_mmap_file
[2025-06-03 18:37:40] -rw-r--r--. 1 boinc boinc        28 Jun  3 18:37 wrapper_checkpoint.txt
[2025-06-03 18:37:40] -rw-r--r--. 1 boinc boinc     20478 Jun  3 18:37 stderr.txt
[2025-06-03 18:37:40] HITS file was successfully produced:
[2025-06-03 18:37:40] -rw-------. 1 boinc boinc 179119482 Jun  3 18:06 shared/HITS.pool.root.1
[2025-06-03 18:37:40]  *** Contents of shared directory: ***
[2025-06-03 18:37:40] total 387312
[2025-06-03 18:37:40] -rw-r--r--. 2 boinc boinc 215376377 Jun  3 14:20 ATLAS.root_0
[2025-06-03 18:37:40] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:20 start_atlas.sh
[2025-06-03 18:37:40] -rw-r--r--. 2 boinc boinc    508872 Jun  3 14:20 input.tar.gz
[2025-06-03 18:37:40] -rw-------. 1 boinc boinc 179119482 Jun  3 18:06 HITS.pool.root.1
[2025-06-03 18:37:40] -rw-------. 1 boinc boinc   1576960 Jun  3 18:09 result.tar.gz
18:37:42 (23987): run_atlas exited; CPU time 50429.928651
18:37:42 (23987): called boinc_finish(0)

</stderr_txt>
]]>

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