Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:53:09 (22939): wrapper (7.7.26015): starting
12:53:09 (22939): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 12:53:09] Arguments: --nthreads 8
[2025-06-03 12:53:09] Threads: 8
[2025-06-03 12:53:09] Checking for CVMFS
[2025-06-03 12:53:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:53:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:53:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:53:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:53:13] 2.11.2.0 19526 31912 106364 146737 1 59 13652350 25165824 4632 130560 0 16614086 99.855 17070329 2081 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 12:53:13] CVMFS is ok
[2025-06-03 12:53:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:53:13] Checking for apptainer binary...
[2025-06-03 12:53:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:53:13] Running /usr/bin/apptainer --version
[2025-06-03 12:53:13] apptainer version 1.3.2-1.el7
[2025-06-03 12:58:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:58:10] cg-vwn225.simple-grid.lan
[2025-06-03 12:58:10] apptainer works
[2025-06-03 12:58:10] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:58:10] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:58:10] Starting ATLAS job with PandaID=6677400417
[2025-06-03 12:58:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:51:00]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:51:00] 2025-06-03 15:01:23,140 | INFO     | mean y: 2491810.297029703
[2025-06-03 17:51:00] 2025-06-03 15:01:23,141 | INFO     | -- intersect: -3177374789.2490797
[2025-06-03 17:51:00] 2025-06-03 15:01:23,141 | INFO     | intersect: -3177374789.2490797
[2025-06-03 17:51:00] 2025-06-03 15:01:23,141 | INFO     | chi2: 0.0007257553704060851
[2025-06-03 17:51:00] 2025-06-03 15:01:23,141 | INFO     | current chi2=0.0007257553704060851 (change=40.08855156809468 %)
[2025-06-03 17:51:00] 2025-06-03 15:01:23,142 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 17:51:00] 2025-06-03 15:01:23,143 | INFO     | sum of deviations: 3638036584.0000005
[2025-06-03 17:51:00] 2025-06-03 15:01:23,144 | INFO     | mean x: 1748956779.0
[2025-06-03 17:51:00] 2025-06-03 15:01:23,144 | INFO     | mean y: 2492641.269035533
[2025-06-03 17:51:00] 2025-06-03 15:01:23,144 | INFO     | -- intersect: -2681493242.6223226
[2025-06-03 17:51:00] 2025-06-03 15:01:23,144 | INFO     | intersect: -2681493242.6223226
[2025-06-03 17:51:00] 2025-06-03 15:01:23,144 | INFO     | chi2: 0.0002981937396286269
[2025-06-03 17:51:00] 2025-06-03 15:01:23,145 | INFO     | current chi2=0.0002981937396286269 (change=58.91263753766269 %)
[2025-06-03 17:51:00] 2025-06-03 15:01:23,145 | INFO     | sum of square deviations: 2194675568.0
[2025-06-03 17:51:00] 2025-06-03 15:01:23,147 | INFO     | sum of deviations: 2978576198.0
[2025-06-03 17:51:00] 2025-06-03 15:01:23,147 | INFO     | mean x: 1748956931.5
[2025-06-03 17:51:00] 2025-06-03 15:01:23,147 | INFO     | mean y: 2493211.3541666665
[2025-06-03 17:51:00] 2025-06-03 15:01:23,147 | INFO     | -- intersect: -2371161265.6218204
[2025-06-03 17:51:00] 2025-06-03 15:01:23,147 | INFO     | intersect: -2371161265.6218204
[2025-06-03 17:51:00] 2025-06-03 15:01:23,147 | INFO     | chi2: 0.00013169204616740794
[2025-06-03 17:51:00] 2025-06-03 15:01:23,148 | INFO     | current chi2=0.00013169204616740794 (change=55.83675018415264 %)
[2025-06-03 17:51:00] 2025-06-03 15:01:23,148 | INFO     | sum of square deviations: 2027639878.0
[2025-06-03 17:51:00] 2025-06-03 15:01:23,149 | INFO     | sum of deviations: 2563211764.9999995
[2025-06-03 17:51:00] 2025-06-03 15:01:23,150 | INFO     | mean x: 1748957084.0
[2025-06-03 17:51:00] 2025-06-03 15:01:23,150 | INFO     | mean y: 2493590.4171122992
[2025-06-03 17:51:00] 2025-06-03 15:01:23,150 | INFO     | -- intersect: -2208425332.0350986
[2025-06-03 17:51:00] 2025-06-03 15:01:23,150 | INFO     | intersect: -2208425332.0350986
[2025-06-03 17:51:00] 2025-06-03 15:01:23,150 | INFO     | chi2: 9.420620181086058e-05
[2025-06-03 17:51:00] 2025-06-03 15:01:23,150 | INFO     | current chi2=9.420620181086058e-05 (change=28.464774788976293 %)
[2025-06-03 17:51:00] 2025-06-03 15:01:23,151 | INFO     | sum of square deviations: 1869302025.5
[2025-06-03 17:51:00] 2025-06-03 15:01:23,152 | INFO     | sum of deviations: 2187171317.5
[2025-06-03 17:51:00] 2025-06-03 15:01:23,152 | INFO     | mean x: 1748957236.5
[2025-06-03 17:51:00] 2025-06-03 15:01:23,153 | INFO     | mean y: 2493952.532967033
[2025-06-03 17:51:00] 2025-06-03 15:01:23,153 | INFO     | -- intersect: -2043868299.8075464
[2025-06-03 17:51:00] 2025-06-03 15:01:23,153 | INFO     | intersect: -2043868299.8075464
[2025-06-03 17:51:00] 2025-06-03 15:01:23,153 | INFO     | chi2: 5.987407675065612e-05
[2025-06-03 17:51:00] 2025-06-03 15:01:23,154 | INFO     | current chi2=5.987407675065612e-05 (change=36.44359330942316 %)
[2025-06-03 17:51:00] 2025-06-03 15:01:23,154 | INFO     | sum of square deviations: 1719429448.0
[2025-06-03 17:51:00] 2025-06-03 15:01:23,155 | INFO     | sum of deviations: 1948755410.0
[2025-06-03 17:51:00] 2025-06-03 15:01:23,155 | INFO     | mean x: 1748957389.0
[2025-06-03 17:51:00] 2025-06-03 15:01:23,156 | INFO     | mean y: 2494194.1129943505
[2025-06-03 17:51:00] 2025-06-03 15:01:23,156 | INFO     | -- intersect: -1979727395.5181868
[2025-06-03 17:51:00] 2025-06-03 15:01:23,156 | INFO     | intersect: -1979727395.5181868
[2025-06-03 17:51:00] 2025-06-03 15:01:23,156 | INFO     | chi2: 4.985954690257792e-05
[2025-06-03 17:51:00] 2025-06-03 15:01:23,156 | INFO     | current chi2=4.985954690257792e-05 (change=16.725986255760443 %)
[2025-06-03 17:51:00] 2025-06-03 15:01:23,156 | INFO     | left removable region: 100
[2025-06-03 17:51:00] 2025-06-03 15:01:23,157 | INFO     | sum of square deviations: 549294020.0
[2025-06-03 17:51:00] 2025-06-03 15:01:23,158 | INFO     | sum of deviations: 707407361.9999999
[2025-06-03 17:51:00] 2025-06-03 15:01:23,158 | INFO     | mean x: 1748958731.0
[2025-06-03 17:51:00] 2025-06-03 15:01:23,158 | INFO     | mean y: 2495588.132231405
[2025-06-03 17:51:00] 2025-06-03 15:01:23,158 | INFO     | -- intersect: -2249897915.338965
[2025-06-03 17:51:00] 2025-06-03 15:01:23,158 | INFO     | intersect: -2249897915.338965
[2025-06-03 17:51:00] 2025-06-03 15:01:23,158 | INFO     | chi2: 4.184101565530239e-05
[2025-06-03 17:51:00] 2025-06-03 15:01:23,159 | INFO     | -- intersect: -2249897915.338965
[2025-06-03 17:51:00] 2025-06-03 15:01:23,159 | INFO     | current memory leak: 1.29 B/s (using 121 data points, chi2=0.00)
[2025-06-03 17:51:00] 2025-06-03 15:01:23,160 | INFO     | ..............................
[2025-06-03 17:51:00] 2025-06-03 15:01:23,160 | INFO     | . Timing measurements:
[2025-06-03 17:51:00] 2025-06-03 15:01:23,160 | INFO     | . get job = 0 s
[2025-06-03 17:51:00] 2025-06-03 15:01:23,160 | INFO     | . initial setup = 4 s
[2025-06-03 17:51:00] 2025-06-03 15:01:23,160 | INFO     | . payload setup = 156 s
[2025-06-03 17:51:00] 2025-06-03 15:01:23,160 | INFO     | . stage-in = 0 s
[2025-06-03 17:51:00] 2025-06-03 15:01:23,160 | INFO     | . payload execution = 13994 s
[2025-06-03 17:51:00] 2025-06-03 15:01:23,160 | INFO     | . stage-out = 1 s
[2025-06-03 17:51:00] 2025-06-03 15:01:23,160 | INFO     | . log creation = 0 s
[2025-06-03 17:51:00] 2025-06-03 15:01:23,160 | INFO     | ..............................
[2025-06-03 17:51:00] 2025-06-03 15:01:23,291 | INFO     | 
[2025-06-03 17:51:00] 2025-06-03 15:01:23,291 | INFO     | job summary report
[2025-06-03 17:51:00] 2025-06-03 15:01:23,291 | INFO     | --------------------------------------------------
[2025-06-03 17:51:00] 2025-06-03 15:01:23,291 | INFO     | PanDA job id: 6677400417
[2025-06-03 17:51:00] 2025-06-03 15:01:23,292 | INFO     | task id: 45006595
[2025-06-03 17:51:00] 2025-06-03 15:01:23,292 | INFO     | errors: (none)
[2025-06-03 17:51:00] 2025-06-03 15:01:23,292 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:51:00] 2025-06-03 15:01:23,292 | INFO     | pilot state: finished 
[2025-06-03 17:51:00] 2025-06-03 15:01:23,292 | INFO     | transexitcode: 0
[2025-06-03 17:51:00] 2025-06-03 15:01:23,292 | INFO     | exeerrorcode: 0
[2025-06-03 17:51:00] 2025-06-03 15:01:23,292 | INFO     | exeerrordiag: 
[2025-06-03 17:51:00] 2025-06-03 15:01:23,292 | INFO     | exitcode: 0
[2025-06-03 17:51:00] 2025-06-03 15:01:23,292 | INFO     | exitmsg: OK
[2025-06-03 17:51:00] 2025-06-03 15:01:23,292 | INFO     | cpuconsumptiontime: 52317 s
[2025-06-03 17:51:00] 2025-06-03 15:01:23,293 | INFO     | nevents: 400
[2025-06-03 17:51:00] 2025-06-03 15:01:23,293 | INFO     | neventsw: 0
[2025-06-03 17:51:00] 2025-06-03 15:01:23,293 | INFO     | pid: 7190
[2025-06-03 17:51:00] 2025-06-03 15:01:23,293 | INFO     | pgrp: 7190
[2025-06-03 17:51:00] 2025-06-03 15:01:23,293 | INFO     | corecount: 8
[2025-06-03 17:51:00] 2025-06-03 15:01:23,293 | INFO     | event service: False
[2025-06-03 17:51:00] 2025-06-03 15:01:23,293 | INFO     | sizes: {0: 2405011, 1: 2405210, 12: 2405210, 23: 2405238, 34: 2405266, 44: 2405294, 55: 2405450, 66: 2405478, 76: 2405506, 87: 2405562, 92: 2405796, 98: 2406104, 1
[2025-06-03 17:51:00] 2025-06-03 15:01:23,293 | INFO     | --------------------------------------------------
[2025-06-03 17:51:00] 2025-06-03 15:01:23,293 | INFO     | 
[2025-06-03 17:51:00] 2025-06-03 15:01:23,293 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-03 17:51:00] 2025-06-03 15:01:23,618 | INFO     | PID=30985 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 17:51:00] 2025-06-03 15:01:23,618 | INFO     | .. there are 9 such processes running
[2025-06-03 17:51:00] 2025-06-03 15:01:23,817 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,817 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,817 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,818 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,818 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,818 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,818 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,818 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,818 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,818 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,818 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,819 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,819 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,819 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,819 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,819 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,819 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,819 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:51:00] 2025-06-03 15:01:23,819 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,820 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:51:00] 2025-06-03 15:01:23,820 | INFO     | job 6677400417 has completed (purged errors)
[2025-06-03 17:51:00] 2025-06-03 15:01:23,820 | INFO     | overall cleanup function is called
[2025-06-03 17:51:00] 2025-06-03 15:01:24,829 | INFO     | --- collectZombieJob: --- 10, [7190]
[2025-06-03 17:51:00] 2025-06-03 15:01:24,829 | INFO     | zombie collector waiting for pid 7190
[2025-06-03 17:51:00] 2025-06-03 15:01:24,829 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:51:00] 2025-06-03 15:01:24,829 | INFO     | collected zombie processes
[2025-06-03 17:51:00] 2025-06-03 15:01:24,829 | INFO     | will attempt to kill all subprocesses of pid=7190
[2025-06-03 17:51:00] 2025-06-03 15:01:24,976 | INFO     | process IDs to be killed: [7190] (in reverse order)
[2025-06-03 17:51:00] 2025-06-03 15:01:25,709 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:51:00] 2025-06-03 15:01:25,710 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:51:00] 2025-06-03 15:01:25,713 | INFO     | did not find any defunct processes belonging to 7190
[2025-06-03 17:51:00] 2025-06-03 15:01:25,725 | INFO     | did not find any defunct processes belonging to 7190
[2025-06-03 17:51:00] 2025-06-03 15:01:25,725 | INFO     | ready for new job
[2025-06-03 17:51:00] 2025-06-03 15:01:25,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:51:00] 2025-06-03 15:01:25,727 | INFO     | **************************************
[2025-06-03 17:51:00] 2025-06-03 15:01:25,728 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:51:00] 2025-06-03 15:01:25,728 | INFO     | **************************************
[2025-06-03 17:51:00] 2025-06-03 15:01:25,728 | INFO     | 
[2025-06-03 17:51:00] 2025-06-03 15:01:25,728 | INFO     | pilot is running in a VM
[2025-06-03 17:51:00] 2025-06-03 15:01:25,728 | INFO     | architecture information:
[2025-06-03 17:51:00] 2025-06-03 15:01:25,744 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:51:00] 2025-06-03 15:01:26,005 | INFO     | cat /etc/os-release:
[2025-06-03 17:51:00] NAME="CentOS Linux"
[2025-06-03 17:51:00] VERSION="7 (Core)"
[2025-06-03 17:51:00] ID="centos"
[2025-06-03 17:51:00] ID_LIKE="rhel fedora"
[2025-06-03 17:51:00] VERSION_ID="7"
[2025-06-03 17:51:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:51:00] ANSI_COLOR="0;31"
[2025-06-03 17:51:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:51:00] HOME_URL="https://www.centos.org/"
[2025-06-03 17:51:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:51:00] 
[2025-06-03 17:51:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:51:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:51:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:51:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:51:00] 
[2025-06-03 17:51:00] 2025-06-03 15:01:26,005 | INFO     | **************************************
[2025-06-03 17:51:00] 2025-06-03 15:01:26,508 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-03 17:51:00] 2025-06-03 15:01:26,707 | INFO     | sufficient remaining disk space (496713596928 B)
[2025-06-03 17:51:00] 2025-06-03 15:01:26,708 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:51:00] 2025-06-03 15:01:26,708 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:51:00] 2025-06-03 15:01:26,708 | INFO     | update_server=False
[2025-06-03 17:51:00] 2025-06-03 15:01:26,708 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:51:00] 2025-06-03 15:01:26,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:51:00] 2025-06-03 15:01:26,713 | INFO     | aborting loop
[2025-06-03 17:51:00] 2025-06-03 15:01:27,122 | INFO     | all data control threads have been joined
[2025-06-03 17:51:00] 2025-06-03 15:01:27,435 | INFO     | all job control threads have been joined
[2025-06-03 17:51:00] 2025-06-03 15:01:27,631 | INFO     | all payload control threads have been joined
[2025-06-03 17:51:00] 2025-06-03 15:01:27,632 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:51:00] 2025-06-03 15:01:27,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:51:00] 2025-06-03 15:01:27,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:51:00] 2025-06-03 15:01:27,714 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:51:00] 2025-06-03 15:01:27,720 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:51:00] 2025-06-03 15:01:27,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:51:00] 2025-06-03 15:01:28,128 | INFO     | [data] control thread has finished
[2025-06-03 17:51:00] 2025-06-03 15:01:28,305 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:51:00] 2025-06-03 15:01:28,375 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:51:00] 2025-06-03 15:01:28,441 | INFO     | [job] control thread has finished
[2025-06-03 17:51:00] 2025-06-03 15:01:28,474 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:51:00] 2025-06-03 15:01:28,637 | INFO     | [payload] control thread has finished
[2025-06-03 17:51:00] 2025-06-03 15:01:28,680 | INFO     | [job] validate thread has finished
[2025-06-03 17:51:00] 2025-06-03 15:01:28,708 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:51:00] 2025-06-03 15:01:28,732 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:51:00] 2025-06-03 15:01:29,059 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:51:00] 2025-06-03 15:01:29,128 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:51:00] 2025-06-03 15:01:29,128 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:51:00] 2025-06-03 15:01:29,185 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:51:00] 2025-06-03 15:01:29,311 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:51:00] 2025-06-03 15:01:29,770 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:51:00] 2025-06-03 15:01:32,384 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:51:00] 2025-06-03 15:01:33,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139967065257792)>', '<ExcThread(monitor, started 139966407505664)>']
[2025-06-03 17:51:00] 2025-06-03 15:01:34,675 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:51:00] 2025-06-03 15:01:34,675 | INFO     | [monitor] control thread has ended
[2025-06-03 17:51:00] 2025-06-03 15:01:38,903 | INFO     | all workflow threads have been joined
[2025-06-03 17:51:00] 2025-06-03 15:01:38,903 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:51:00] 2025-06-03 15:01:38,903 | INFO     | traces error code: 0
[2025-06-03 17:51:00] 2025-06-03 15:01:38,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:51:00] 2025-06-03 15:01:39,128 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:51:00] 2025-06-03 15:01:39,138 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:51:00] 2025-06-03 15:01:39,150 [wrapper] pilotpid: 30985
[2025-06-03 17:51:00] 2025-06-03 15:01:39,161 [wrapper] Pilot exit status: 0
[2025-06-03 17:51:00] 2025-06-03 15:01:39,195 [wrapper] pandaids: 6677400417
[2025-06-03 17:51:00] 2025-06-03 15:01:39,259 [wrapper] cleanup supervisor_pilot 14569 30986
[2025-06-03 17:51:00] 2025-06-03 15:01:39,264 [wrapper] Test setup, not cleaning
[2025-06-03 17:51:00] 2025-06-03 15:01:39,270 [wrapper] apfmon messages muted
[2025-06-03 17:51:00] 2025-06-03 15:01:39,280 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:51:00] 2025-06-03 15:01:39,287 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:51:00]  *** Error codes and diagnostics ***
[2025-06-03 17:51:00]     "exeErrorCode": 0,
[2025-06-03 17:51:00]     "exeErrorDiag": "",
[2025-06-03 17:51:00]     "pilotErrorCode": 0,
[2025-06-03 17:51:00]     "pilotErrorDiag": "",
[2025-06-03 17:51:00]  *** Listing of results directory ***
[2025-06-03 17:51:00] total 402680
[2025-06-03 17:51:00] -rw-r--r--. 1 boinc boinc    495897 Jun  2 22:47 pilot3.tar.gz
[2025-06-03 17:51:00] -rwx------. 1 boinc boinc     37140 Jun  2 22:50 runpilot2-wrapper.sh
[2025-06-03 17:51:00] -rw-r--r--. 1 boinc boinc      5111 Jun  2 22:50 queuedata.json
[2025-06-03 17:51:00] -rw-r--r--. 1 boinc boinc       100 Jun  3 12:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:51:00] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 12:53 run_atlas
[2025-06-03 17:51:00] -rw-r--r--. 1 boinc boinc       105 Jun  3 12:53 job.xml
[2025-06-03 17:51:00] -rw-r--r--. 1 boinc boinc      6392 Jun  3 12:53 init_data.xml
[2025-06-03 17:51:00] -rw-r--r--. 2 boinc boinc 216193892 Jun  3 12:53 EVNT.45006593._000464.pool.root.1
[2025-06-03 17:51:00] -rw-r--r--. 2 boinc boinc     15093 Jun  3 12:53 start_atlas.sh
[2025-06-03 17:51:00] drwxrwx--x. 2 boinc boinc        68 Jun  3 12:53 shared
[2025-06-03 17:51:00] -rw-r--r--. 2 boinc boinc    508875 Jun  3 12:53 input.tar.gz
[2025-06-03 17:51:00] -rw-r--r--. 1 boinc boinc         0 Jun  3 12:53 boinc_lockfile
[2025-06-03 17:51:00] -rw-r--r--. 1 boinc boinc      2524 Jun  3 12:58 pandaJob.out
[2025-06-03 17:51:00] -rw-------. 1 boinc boinc    985490 Jun  3 13:01 agis_schedconf.cvmfs.json
[2025-06-03 17:51:00] drwx------. 4 boinc boinc      4096 Jun  3 13:01 pilot3
[2025-06-03 17:51:00] -rw-r--r--. 1 boinc boinc       531 Jun  3 16:59 boinc_task_state.xml
[2025-06-03 17:51:00] -rw-------. 1 boinc boinc 189053953 Jun  3 16:59 HITS.45006595._011596.pool.root.1
[2025-06-03 17:51:00] -rw-------. 1 boinc boinc      1017 Jun  3 17:00 memory_monitor_summary.json
[2025-06-03 17:51:00] -rw-------. 1 boinc boinc   1603667 Jun  3 17:00 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:51:00] -rw-------. 1 boinc boinc    396815 Jun  3 17:00 log.45006595._011596.job.log.tgz.1
[2025-06-03 17:51:00] -rw-------. 1 boinc boinc        95 Jun  3 17:00 pilot_heartbeat.json
[2025-06-03 17:51:00] -rw-------. 1 boinc boinc      7687 Jun  3 17:01 heartbeat.json
[2025-06-03 17:51:00] -rw-------. 1 boinc boinc      4416 Jun  3 17:01 pilotlog.txt
[2025-06-03 17:51:00] -rw-------. 1 boinc boinc   1243501 Jun  3 17:01 log.45006595._011596.job.log.1
[2025-06-03 17:51:00] -rw-------. 1 boinc boinc       357 Jun  3 17:01 output.list
[2025-06-03 17:51:00] -rw-r--r--. 1 boinc boinc       620 Jun  3 17:01 runtime_log
[2025-06-03 17:51:00] -rw-------. 1 boinc boinc   1658880 Jun  3 17:01 result.tar.gz
[2025-06-03 17:51:00] -rw-r--r--. 1 boinc boinc      8659 Jun  3 17:01 runtime_log.err
[2025-06-03 17:51:00] -rw-------. 1 boinc boinc       656 Jun  3 17:01 90lNDmHIRg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlfgKDmf6QFym.diag
[2025-06-03 17:51:00] -rw-r--r--. 1 boinc boinc      8192 Jun  3 17:51 boinc_mmap_file
[2025-06-03 17:51:00] -rw-r--r--. 1 boinc boinc        28 Jun  3 17:51 wrapper_checkpoint.txt
[2025-06-03 17:51:00] -rw-r--r--. 1 boinc boinc     20639 Jun  3 17:51 stderr.txt
[2025-06-03 17:51:00] HITS file was successfully produced:
[2025-06-03 17:51:00] -rw-------. 1 boinc boinc 189053953 Jun  3 16:59 shared/HITS.pool.root.1
[2025-06-03 17:51:00]  *** Contents of shared directory: ***
[2025-06-03 17:51:00] total 397888
[2025-06-03 17:51:00] -rw-r--r--. 2 boinc boinc 216193892 Jun  3 12:53 ATLAS.root_0
[2025-06-03 17:51:00] -rw-r--r--. 2 boinc boinc     15093 Jun  3 12:53 start_atlas.sh
[2025-06-03 17:51:00] -rw-r--r--. 2 boinc boinc    508875 Jun  3 12:53 input.tar.gz
[2025-06-03 17:51:00] -rw-------. 1 boinc boinc 189053953 Jun  3 16:59 HITS.pool.root.1
[2025-06-03 17:51:00] -rw-------. 1 boinc boinc   1658880 Jun  3 17:01 result.tar.gz
17:51:02 (22939): run_atlas exited; CPU time 52511.374518
17:51:02 (22939): called boinc_finish(0)

</stderr_txt>
]]>

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