Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:07:55 (26722): wrapper (7.7.26015): starting
10:07:55 (26722): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 10:07:55] Arguments: --nthreads 8
[2025-06-03 10:07:55] Threads: 8
[2025-06-03 10:07:55] Checking for CVMFS
[2025-06-03 10:07:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:07:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:07:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:07:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:07:57] 2.11.2.0 31527 31649 87788 146734 0 16 22185066 25165824 4632 130560 0 16153972 99.857 17248149 1960 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 10:07:57] CVMFS is ok
[2025-06-03 10:07:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:07:57] Checking for apptainer binary...
[2025-06-03 10:07:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:07:57] Running /usr/bin/apptainer --version
[2025-06-03 10:07:57] apptainer version 1.3.2-1.el7
[2025-06-03 10:07:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:38:02] cg-vwn469.simple-grid.lan
[2025-06-03 10:38:02] apptainer works
[2025-06-03 10:38:02] Set ATHENA_PROC_NUMBER=8
[2025-06-03 10:38:02] Set ATHENA_CORE_NUMBER=8
[2025-06-03 10:38:02] Starting ATLAS job with PandaID=6667847452
[2025-06-03 10:38:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:54:26]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:54:26] 2025-06-03 13:42:20,487 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:54:26] 2025-06-03 13:42:20,487 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:54:26] 2025-06-03 13:42:20,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:54:26] 2025-06-03 13:42:20,492 | INFO     | fitting pss+swap vs Time
[2025-06-03 15:54:26] 2025-06-03 13:42:20,493 | INFO     | sum of square deviations: 7253894147.5
[2025-06-03 15:54:26] 2025-06-03 13:42:20,495 | INFO     | sum of deviations: 105280312054.99998
[2025-06-03 15:54:26] 2025-06-03 13:42:20,496 | INFO     | mean x: 1748949303.5
[2025-06-03 15:54:26] 2025-06-03 13:42:20,496 | INFO     | mean y: 2481348.1818181816
[2025-06-03 15:54:26] 2025-06-03 13:42:20,496 | INFO     | -- intersect: -25381116026.796955
[2025-06-03 15:54:26] 2025-06-03 13:42:20,496 | INFO     | intersect: -25381116026.796955
[2025-06-03 15:54:26] 2025-06-03 13:42:20,496 | INFO     | chi2: 7.5194991828165145
[2025-06-03 15:54:26] 2025-06-03 13:42:20,501 | INFO     | sum of square deviations: 6880054580.0
[2025-06-03 15:54:26] 2025-06-03 13:42:20,504 | INFO     | sum of deviations: 103645959733.99998
[2025-06-03 15:54:26] 2025-06-03 13:42:20,504 | INFO     | mean x: 1748949151.0
[2025-06-03 15:54:26] 2025-06-03 13:42:20,504 | INFO     | mean y: 2480681.4199288255
[2025-06-03 15:54:26] 2025-06-03 13:42:20,504 | INFO     | -- intersect: -26344913975.638077
[2025-06-03 15:54:26] 2025-06-03 13:42:20,504 | INFO     | intersect: -26344913975.638077
[2025-06-03 15:54:26] 2025-06-03 13:42:20,505 | INFO     | chi2: 7.530118074260632
[2025-06-03 15:54:26] 2025-06-03 13:42:20,505 | INFO     | current chi2=7.530118074260632 (change=-0.14121806766578068 %)
[2025-06-03 15:54:26] 2025-06-03 13:42:20,505 | INFO     | right removable region: 280
[2025-06-03 15:54:26] 2025-06-03 13:42:20,505 | INFO     | sum of square deviations: 6880054580.0
[2025-06-03 15:54:26] 2025-06-03 13:42:20,508 | INFO     | sum of deviations: 1454620396.0
[2025-06-03 15:54:26] 2025-06-03 13:42:20,508 | INFO     | mean x: 1748949456.0
[2025-06-03 15:54:26] 2025-06-03 13:42:20,508 | INFO     | mean y: 2523684.918149466
[2025-06-03 15:54:26] 2025-06-03 13:42:20,508 | INFO     | -- intersect: -367249188.3474438
[2025-06-03 15:54:26] 2025-06-03 13:42:20,508 | INFO     | intersect: -367249188.3474438
[2025-06-03 15:54:26] 2025-06-03 13:42:20,509 | INFO     | chi2: 2.300922220933785
[2025-06-03 15:54:26] 2025-06-03 13:42:20,509 | INFO     | current chi2=2.300922220933785 (change=69.4005921805028 %)
[2025-06-03 15:54:26] 2025-06-03 13:42:20,512 | INFO     | sum of square deviations: 6519285025.0
[2025-06-03 15:54:26] 2025-06-03 13:42:20,515 | INFO     | sum of deviations: -61205867588.50002
[2025-06-03 15:54:26] 2025-06-03 13:42:20,515 | INFO     | mean x: 1748949608.5
[2025-06-03 15:54:26] 2025-06-03 13:42:20,515 | INFO     | mean y: 2550083.742753623
[2025-06-03 15:54:26] 2025-06-03 13:42:20,515 | INFO     | -- intersect: 16422445478.147594
[2025-06-03 15:54:26] 2025-06-03 13:42:20,515 | INFO     | intersect: 16422445478.147594
[2025-06-03 15:54:26] 2025-06-03 13:42:20,516 | INFO     | chi2: 0.2781557466962468
[2025-06-03 15:54:26] 2025-06-03 13:42:20,516 | INFO     | current chi2=0.2781557466962468 (change=87.91111910843458 %)
[2025-06-03 15:54:26] 2025-06-03 13:42:20,516 | INFO     | sum of square deviations: 6171352920.0
[2025-06-03 15:54:26] 2025-06-03 13:42:20,518 | INFO     | sum of deviations: -64746506235.0
[2025-06-03 15:54:26] 2025-06-03 13:42:20,519 | INFO     | mean x: 1748949761.0
[2025-06-03 15:54:26] 2025-06-03 13:42:20,519 | INFO     | mean y: 2551605.372693727
[2025-06-03 15:54:26] 2025-06-03 13:42:20,519 | INFO     | -- intersect: 18351589178.36702
[2025-06-03 15:54:26] 2025-06-03 13:42:20,519 | INFO     | intersect: 18351589178.36702
[2025-06-03 15:54:26] 2025-06-03 13:42:20,519 | INFO     | chi2: 0.2373973527620772
[2025-06-03 15:54:26] 2025-06-03 13:42:20,519 | INFO     | current chi2=0.2373973527620772 (change=14.653083539805062 %)
[2025-06-03 15:54:26] 2025-06-03 13:42:20,519 | INFO     | left removable region: 30
[2025-06-03 15:54:26] 2025-06-03 13:42:20,520 | INFO     | sum of square deviations: 4844974562.5
[2025-06-03 15:54:26] 2025-06-03 13:42:20,522 | INFO     | sum of deviations: -38863511079.00001
[2025-06-03 15:54:26] 2025-06-03 13:42:20,522 | INFO     | mean x: 1748950035.5
[2025-06-03 15:54:26] 2025-06-03 13:42:20,522 | INFO     | mean y: 2540309.016
[2025-06-03 15:54:26] 2025-06-03 13:42:20,522 | INFO     | -- intersect: 14031579719.740812
[2025-06-03 15:54:26] 2025-06-03 13:42:20,522 | INFO     | intersect: 14031579719.740812
[2025-06-03 15:54:26] 2025-06-03 13:42:20,523 | INFO     | chi2: 0.1980867780399983
[2025-06-03 15:54:26] 2025-06-03 13:42:20,523 | INFO     | -- intersect: 14031579719.740812
[2025-06-03 15:54:26] 2025-06-03 13:42:20,523 | INFO     | current memory leak: -8.02 B/s (using 250 data points, chi2=0.20)
[2025-06-03 15:54:26] 2025-06-03 13:42:20,524 | INFO     | ..............................
[2025-06-03 15:54:26] 2025-06-03 13:42:20,524 | INFO     | . Timing measurements:
[2025-06-03 15:54:26] 2025-06-03 13:42:20,524 | INFO     | . get job = 0 s
[2025-06-03 15:54:26] 2025-06-03 13:42:20,524 | INFO     | . initial setup = 6 s
[2025-06-03 15:54:26] 2025-06-03 13:42:20,524 | INFO     | . payload setup = 167 s
[2025-06-03 15:54:26] 2025-06-03 13:42:20,524 | INFO     | . stage-in = 0 s
[2025-06-03 15:54:26] 2025-06-03 13:42:20,524 | INFO     | . payload execution = 17592 s
[2025-06-03 15:54:26] 2025-06-03 13:42:20,524 | INFO     | . stage-out = 4 s
[2025-06-03 15:54:26] 2025-06-03 13:42:20,524 | INFO     | . log creation = 1 s
[2025-06-03 15:54:26] 2025-06-03 13:42:20,525 | INFO     | ..............................
[2025-06-03 15:54:26] 2025-06-03 13:42:20,656 | INFO     | 
[2025-06-03 15:54:26] 2025-06-03 13:42:20,656 | INFO     | job summary report
[2025-06-03 15:54:26] 2025-06-03 13:42:20,657 | INFO     | --------------------------------------------------
[2025-06-03 15:54:26] 2025-06-03 13:42:20,657 | INFO     | PanDA job id: 6667847452
[2025-06-03 15:54:26] 2025-06-03 13:42:20,657 | INFO     | task id: 44871837
[2025-06-03 15:54:26] 2025-06-03 13:42:20,657 | INFO     | errors: (none)
[2025-06-03 15:54:26] 2025-06-03 13:42:20,657 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:54:26] 2025-06-03 13:42:20,657 | INFO     | pilot state: finished 
[2025-06-03 15:54:26] 2025-06-03 13:42:20,657 | INFO     | transexitcode: 0
[2025-06-03 15:54:26] 2025-06-03 13:42:20,657 | INFO     | exeerrorcode: 0
[2025-06-03 15:54:26] 2025-06-03 13:42:20,657 | INFO     | exeerrordiag: 
[2025-06-03 15:54:26] 2025-06-03 13:42:20,657 | INFO     | exitcode: 0
[2025-06-03 15:54:26] 2025-06-03 13:42:20,657 | INFO     | exitmsg: OK
[2025-06-03 15:54:26] 2025-06-03 13:42:20,657 | INFO     | cpuconsumptiontime: 65386 s
[2025-06-03 15:54:26] 2025-06-03 13:42:20,657 | INFO     | nevents: 400
[2025-06-03 15:54:26] 2025-06-03 13:42:20,658 | INFO     | neventsw: 0
[2025-06-03 15:54:26] 2025-06-03 13:42:20,658 | INFO     | pid: 25890
[2025-06-03 15:54:26] 2025-06-03 13:42:20,658 | INFO     | pgrp: 25890
[2025-06-03 15:54:26] 2025-06-03 13:42:20,658 | INFO     | corecount: 8
[2025-06-03 15:54:26] 2025-06-03 13:42:20,658 | INFO     | event service: False
[2025-06-03 15:54:26] 2025-06-03 13:42:20,658 | INFO     | sizes: {0: 2404347, 1: 2405032, 2: 2405231, 13: 2405231, 23: 2405287, 34: 2405315, 45: 2405471, 56: 2405499, 66: 2405527, 77: 2405555, 88: 2405611, 96: 2406125, 98
[2025-06-03 15:54:26] 2025-06-03 13:42:20,658 | INFO     | --------------------------------------------------
[2025-06-03 15:54:26] 2025-06-03 13:42:20,658 | INFO     | 
[2025-06-03 15:54:26] 2025-06-03 13:42:20,658 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 15:54:26] 2025-06-03 13:42:20,999 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:20,999 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:20,999 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:20,999 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:20,999 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:20,999 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:21,000 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:21,000 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:21,000 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:21,000 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:21,000 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:21,000 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:21,000 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:21,000 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:21,000 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:21,000 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:21,000 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:21,000 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:54:26] 2025-06-03 13:42:21,001 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:21,001 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:54:26] 2025-06-03 13:42:21,001 | INFO     | job 6667847452 has completed (purged errors)
[2025-06-03 15:54:26] 2025-06-03 13:42:21,001 | INFO     | overall cleanup function is called
[2025-06-03 15:54:26] 2025-06-03 13:42:22,010 | INFO     | --- collectZombieJob: --- 10, [25890]
[2025-06-03 15:54:26] 2025-06-03 13:42:22,010 | INFO     | zombie collector waiting for pid 25890
[2025-06-03 15:54:26] 2025-06-03 13:42:22,010 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:54:26] 2025-06-03 13:42:22,010 | INFO     | collected zombie processes
[2025-06-03 15:54:26] 2025-06-03 13:42:22,011 | INFO     | will attempt to kill all subprocesses of pid=25890
[2025-06-03 15:54:26] 2025-06-03 13:42:22,123 | INFO     | process IDs to be killed: [25890] (in reverse order)
[2025-06-03 15:54:26] 2025-06-03 13:42:22,818 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:54:26] 2025-06-03 13:42:22,824 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:54:26] 2025-06-03 13:42:22,831 | INFO     | did not find any defunct processes belonging to 25890
[2025-06-03 15:54:26] 2025-06-03 13:42:22,851 | INFO     | did not find any defunct processes belonging to 25890
[2025-06-03 15:54:26] 2025-06-03 13:42:22,852 | INFO     | ready for new job
[2025-06-03 15:54:26] 2025-06-03 13:42:22,852 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:54:26] 2025-06-03 13:42:22,854 | INFO     | **************************************
[2025-06-03 15:54:26] 2025-06-03 13:42:22,854 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 15:54:26] 2025-06-03 13:42:22,854 | INFO     | **************************************
[2025-06-03 15:54:26] 2025-06-03 13:42:22,854 | INFO     | 
[2025-06-03 15:54:26] 2025-06-03 13:42:22,855 | INFO     | pilot is running in a VM
[2025-06-03 15:54:26] 2025-06-03 13:42:22,855 | INFO     | architecture information:
[2025-06-03 15:54:26] 2025-06-03 13:42:22,895 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:54:26] 2025-06-03 13:42:22,979 | INFO     | PID=17285 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 15:54:26] 2025-06-03 13:42:22,980 | INFO     | .. there are 9 such processes running
[2025-06-03 15:54:26] 2025-06-03 13:42:23,214 | INFO     | cat /etc/os-release:
[2025-06-03 15:54:26] NAME="CentOS Linux"
[2025-06-03 15:54:26] VERSION="7 (Core)"
[2025-06-03 15:54:26] ID="centos"
[2025-06-03 15:54:26] ID_LIKE="rhel fedora"
[2025-06-03 15:54:26] VERSION_ID="7"
[2025-06-03 15:54:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:54:26] ANSI_COLOR="0;31"
[2025-06-03 15:54:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:54:26] HOME_URL="https://www.centos.org/"
[2025-06-03 15:54:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:54:26] 
[2025-06-03 15:54:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:54:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:54:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:54:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:54:26] 
[2025-06-03 15:54:26] 2025-06-03 13:42:23,215 | INFO     | **************************************
[2025-06-03 15:54:26] 2025-06-03 13:42:23,718 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 15:54:26] 2025-06-03 13:42:23,896 | INFO     | sufficient remaining disk space (496760782848 B)
[2025-06-03 15:54:26] 2025-06-03 13:42:23,897 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:54:26] 2025-06-03 13:42:23,897 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:54:26] 2025-06-03 13:42:23,897 | INFO     | update_server=False
[2025-06-03 15:54:26] 2025-06-03 13:42:23,897 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:54:26] 2025-06-03 13:42:23,898 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 15:54:26] 2025-06-03 13:42:23,898 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:54:26] 2025-06-03 13:42:23,898 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:54:26] 2025-06-03 13:42:23,899 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:54:26] 2025-06-03 13:42:23,899 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:54:26] 2025-06-03 13:42:24,042 | INFO     | all data control threads have been joined
[2025-06-03 15:54:26] 2025-06-03 13:42:24,135 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:54:26] 2025-06-03 13:42:24,135 | INFO     | aborting loop
[2025-06-03 15:54:26] 2025-06-03 13:42:24,234 | INFO     | all payload control threads have been joined
[2025-06-03 15:54:26] 2025-06-03 13:42:24,292 | INFO     | all job control threads have been joined
[2025-06-03 15:54:26] 2025-06-03 13:42:24,903 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:54:26] 2025-06-03 13:42:25,048 | INFO     | [data] control thread has finished
[2025-06-03 15:54:26] 2025-06-03 13:42:25,141 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:54:26] 2025-06-03 13:42:25,142 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:54:26] 2025-06-03 13:42:25,240 | INFO     | [payload] control thread has finished
[2025-06-03 15:54:26] 2025-06-03 13:42:25,298 | INFO     | [job] control thread has finished
[2025-06-03 15:54:26] 2025-06-03 13:42:25,352 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:54:26] 2025-06-03 13:42:25,429 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:54:26] 2025-06-03 13:42:25,640 | INFO     | [job] validate thread has finished
[2025-06-03 15:54:26] 2025-06-03 13:42:25,672 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:54:26] 2025-06-03 13:42:25,867 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:54:26] 2025-06-03 13:42:25,906 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:54:26] 2025-06-03 13:42:26,325 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:54:26] 2025-06-03 13:42:26,350 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:54:26] 2025-06-03 13:42:26,354 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:54:26] 2025-06-03 13:42:26,356 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:54:26] 2025-06-03 13:42:26,678 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:54:26] 2025-06-03 13:42:30,365 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:54:26] 2025-06-03 13:42:30,469 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139719754426176)>', '<ExcThread(monitor, started 139719527528192)>']
[2025-06-03 15:54:26] 2025-06-03 13:42:30,940 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:54:26] 2025-06-03 13:42:30,940 | INFO     | [monitor] control thread has ended
[2025-06-03 15:54:26] 2025-06-03 13:42:35,495 | INFO     | all workflow threads have been joined
[2025-06-03 15:54:26] 2025-06-03 13:42:35,495 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:54:26] 2025-06-03 13:42:35,495 | INFO     | traces error code: 0
[2025-06-03 15:54:26] 2025-06-03 13:42:35,496 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:54:26] 2025-06-03 13:42:35,768 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:54:26] 2025-06-03 13:42:35,812 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:54:26] 2025-06-03 13:42:35,865 [wrapper] pilotpid: 17285
[2025-06-03 15:54:26] 2025-06-03 13:42:35,961 [wrapper] Pilot exit status: 0
[2025-06-03 15:54:26] 2025-06-03 13:42:36,249 [wrapper] pandaids: 6667847452
[2025-06-03 15:54:26] 2025-06-03 13:42:37,051 [wrapper] cleanup supervisor_pilot  7275 17286
[2025-06-03 15:54:26] 2025-06-03 13:42:37,103 [wrapper] Test setup, not cleaning
[2025-06-03 15:54:26] 2025-06-03 13:42:37,233 [wrapper] apfmon messages muted
[2025-06-03 15:54:26] 2025-06-03 13:42:37,344 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:54:26] 2025-06-03 13:42:37,430 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:54:26]  *** Error codes and diagnostics ***
[2025-06-03 15:54:26]     "exeErrorCode": 0,
[2025-06-03 15:54:26]     "exeErrorDiag": "",
[2025-06-03 15:54:26]     "pilotErrorCode": 0,
[2025-06-03 15:54:26]     "pilotErrorDiag": "",
[2025-06-03 15:54:26]  *** Listing of results directory ***
[2025-06-03 15:54:26] total 420784
[2025-06-03 15:54:26] -rw-r--r--. 1 boinc boinc    495897 May 28 02:38 pilot3.tar.gz
[2025-06-03 15:54:26] -rw-r--r--. 1 boinc boinc      5111 May 28 02:40 queuedata.json
[2025-06-03 15:54:26] -rwx------. 1 boinc boinc     37140 May 28 02:45 runpilot2-wrapper.sh
[2025-06-03 15:54:26] -rw-r--r--. 1 boinc boinc       100 Jun  3 10:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:54:26] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 10:07 run_atlas
[2025-06-03 15:54:26] -rw-r--r--. 1 boinc boinc       105 Jun  3 10:07 job.xml
[2025-06-03 15:54:26] -rw-r--r--. 1 boinc boinc      6392 Jun  3 10:07 init_data.xml
[2025-06-03 15:54:26] -rw-r--r--. 2 boinc boinc 223214946 Jun  3 10:07 EVNT.44871834._000998.pool.root.1
[2025-06-03 15:54:26] -rw-r--r--. 2 boinc boinc     15093 Jun  3 10:07 start_atlas.sh
[2025-06-03 15:54:26] drwxrwx--x. 2 boinc boinc        68 Jun  3 10:07 shared
[2025-06-03 15:54:26] -rw-r--r--. 2 boinc boinc    508890 Jun  3 10:07 input.tar.gz
[2025-06-03 15:54:26] -rw-r--r--. 1 boinc boinc         0 Jun  3 10:07 boinc_lockfile
[2025-06-03 15:54:26] -rw-r--r--. 1 boinc boinc      2554 Jun  3 10:38 pandaJob.out
[2025-06-03 15:54:26] -rw-------. 1 boinc boinc    985498 Jun  3 10:41 agis_schedconf.cvmfs.json
[2025-06-03 15:54:26] drwx------. 4 boinc boinc      4096 Jun  3 10:41 pilot3
[2025-06-03 15:54:26] -rw-------. 1 boinc boinc 199977451 Jun  3 15:40 HITS.44871837._076125.pool.root.1
[2025-06-03 15:54:26] -rw-r--r--. 1 boinc boinc       531 Jun  3 15:40 boinc_task_state.xml
[2025-06-03 15:54:26] -rw-------. 1 boinc boinc      1020 Jun  3 15:40 memory_monitor_summary.json
[2025-06-03 15:54:26] -rw-------. 1 boinc boinc   1603667 Jun  3 15:40 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:54:26] -rw-------. 1 boinc boinc    402853 Jun  3 15:40 log.44871837._076125.job.log.tgz.1
[2025-06-03 15:54:26] -rw-------. 1 boinc boinc        95 Jun  3 15:41 pilot_heartbeat.json
[2025-06-03 15:54:26] -rw-------. 1 boinc boinc      7704 Jun  3 15:42 heartbeat.json
[2025-06-03 15:54:26] -rw-------. 1 boinc boinc      4931 Jun  3 15:42 pilotlog.txt
[2025-06-03 15:54:26] -rw-------. 1 boinc boinc   1529449 Jun  3 15:42 log.44871837._076125.job.log.1
[2025-06-03 15:54:26] -rw-------. 1 boinc boinc       357 Jun  3 15:42 output.list
[2025-06-03 15:54:26] -rw-r--r--. 1 boinc boinc       620 Jun  3 15:42 runtime_log
[2025-06-03 15:54:26] -rw-------. 1 boinc boinc   1955840 Jun  3 15:42 result.tar.gz
[2025-06-03 15:54:26] -rw-r--r--. 1 boinc boinc      8659 Jun  3 15:42 runtime_log.err
[2025-06-03 15:54:26] -rw-------. 1 boinc boinc       657 Jun  3 15:42 R8rMDmj6Je7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXqaKDmflP3km.diag
[2025-06-03 15:54:26] -rw-r--r--. 1 boinc boinc      8192 Jun  3 15:54 boinc_mmap_file
[2025-06-03 15:54:26] -rw-r--r--. 1 boinc boinc        28 Jun  3 15:54 wrapper_checkpoint.txt
[2025-06-03 15:54:26] -rw-r--r--. 1 boinc boinc     20622 Jun  3 15:54 stderr.txt
[2025-06-03 15:54:26] HITS file was successfully produced:
[2025-06-03 15:54:26] -rw-------. 1 boinc boinc 199977451 Jun  3 15:40 shared/HITS.pool.root.1
[2025-06-03 15:54:26]  *** Contents of shared directory: ***
[2025-06-03 15:54:26] total 415704
[2025-06-03 15:54:26] -rw-r--r--. 2 boinc boinc 223214946 Jun  3 10:07 ATLAS.root_0
[2025-06-03 15:54:26] -rw-r--r--. 2 boinc boinc     15093 Jun  3 10:07 start_atlas.sh
[2025-06-03 15:54:26] -rw-r--r--. 2 boinc boinc    508890 Jun  3 10:07 input.tar.gz
[2025-06-03 15:54:26] -rw-------. 1 boinc boinc 199977451 Jun  3 15:40 HITS.pool.root.1
[2025-06-03 15:54:26] -rw-------. 1 boinc boinc   1955840 Jun  3 15:42 result.tar.gz
15:54:28 (26722): run_atlas exited; CPU time 65618.969138
15:54:28 (26722): called boinc_finish(0)

</stderr_txt>
]]>

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