Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:02:24 (3207): wrapper (7.7.26015): starting
11:02:24 (3207): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:02:25] Arguments: --nthreads 8
[2025-06-03 11:02:25] Threads: 8
[2025-06-03 11:02:25] Checking for CVMFS
[2025-06-03 11:02:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:02:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:02:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:02:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:02:27] 2.11.2.0 29611 31550 95920 146735 3 60 12967260 25165824 4635 130560 0 15658648 99.834 17715644 2173 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 11:02:27] CVMFS is ok
[2025-06-03 11:02:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:02:27] Checking for apptainer binary...
[2025-06-03 11:02:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:02:27] Running /usr/bin/apptainer --version
[2025-06-03 11:02:27] apptainer version 1.3.2-1.el7
[2025-06-03 11:02:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:02:49] cg-vwn406.simple-grid.lan
[2025-06-03 11:02:49] apptainer works
[2025-06-03 11:02:49] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:02:49] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:02:49] Starting ATLAS job with PandaID=6677400396
[2025-06-03 11:02:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:05:33]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:05:33] 2025-06-03 12:45:05,048 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6677400396/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:05:33] 2025-06-03 12:45:05,049 | INFO     | extracted standard info from prmon json
[2025-06-03 15:05:33] 2025-06-03 12:45:05,049 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:05:33] 2025-06-03 12:45:05,049 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:05:33] 2025-06-03 12:45:05,049 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:05:33] 2025-06-03 12:45:05,049 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:05:33] 2025-06-03 12:45:05,054 | INFO     | fitting pss+swap vs Time
[2025-06-03 15:05:33] 2025-06-03 12:45:05,055 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 15:05:33] 2025-06-03 12:45:05,056 | INFO     | sum of deviations: -16118435802.499989
[2025-06-03 15:05:33] 2025-06-03 12:45:05,057 | INFO     | mean x: 1748948032.5
[2025-06-03 15:05:33] 2025-06-03 12:45:05,057 | INFO     | mean y: 2495508.6805555555
[2025-06-03 15:05:33] 2025-06-03 12:45:05,057 | INFO     | -- intersect: 9023801840.420807
[2025-06-03 15:05:33] 2025-06-03 12:45:05,057 | INFO     | intersect: 9023801840.420807
[2025-06-03 15:05:33] 2025-06-03 12:45:05,057 | INFO     | chi2: 2.5197030014660204
[2025-06-03 15:05:33] 2025-06-03 12:45:05,058 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 15:05:33] 2025-06-03 12:45:05,059 | INFO     | sum of deviations: -1554572128.9999943
[2025-06-03 15:05:33] 2025-06-03 12:45:05,059 | INFO     | mean x: 1748947880.0
[2025-06-03 15:05:33] 2025-06-03 12:45:05,060 | INFO     | mean y: 2505791.886255924
[2025-06-03 15:05:33] 2025-06-03 12:45:05,060 | INFO     | -- intersect: 935914202.1048685
[2025-06-03 15:05:33] 2025-06-03 12:45:05,060 | INFO     | intersect: 935914202.1048685
[2025-06-03 15:05:33] 2025-06-03 12:45:05,060 | INFO     | chi2: 1.7565083179713146
[2025-06-03 15:05:33] 2025-06-03 12:45:05,060 | INFO     | current chi2=1.7565083179713146 (change=30.289073079274097 %)
[2025-06-03 15:05:33] 2025-06-03 12:45:05,061 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 15:05:33] 2025-06-03 12:45:05,062 | INFO     | sum of deviations: -1468489630.499997
[2025-06-03 15:05:33] 2025-06-03 12:45:05,062 | INFO     | mean x: 1748947727.5
[2025-06-03 15:05:33] 2025-06-03 12:45:05,062 | INFO     | mean y: 2505856.9077669904
[2025-06-03 15:05:33] 2025-06-03 12:45:05,062 | INFO     | -- intersect: 950002898.8894609
[2025-06-03 15:05:33] 2025-06-03 12:45:05,063 | INFO     | intersect: 950002898.8894609
[2025-06-03 15:05:33] 2025-06-03 12:45:05,063 | INFO     | chi2: 1.756463326336925
[2025-06-03 15:05:33] 2025-06-03 12:45:05,063 | INFO     | current chi2=1.756463326336925 (change=0.0025614244993504725 %)
[2025-06-03 15:05:33] 2025-06-03 12:45:05,063 | INFO     | right removable region: 205
[2025-06-03 15:05:33] 2025-06-03 12:45:05,064 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 15:05:33] 2025-06-03 12:45:05,065 | INFO     | sum of deviations: -51108575438.99999
[2025-06-03 15:05:33] 2025-06-03 12:45:05,065 | INFO     | mean x: 1748948185.0
[2025-06-03 15:05:33] 2025-06-03 12:45:05,065 | INFO     | mean y: 2520440.4739336492
[2025-06-03 15:05:33] 2025-06-03 12:45:05,066 | INFO     | -- intersect: 30689538159.667336
[2025-06-03 15:05:33] 2025-06-03 12:45:05,066 | INFO     | intersect: 30689538159.667336
[2025-06-03 15:05:33] 2025-06-03 12:45:05,066 | INFO     | chi2: 0.9964204644711986
[2025-06-03 15:05:33] 2025-06-03 12:45:05,066 | INFO     | current chi2=0.9964204644711986 (change=60.454844722117706 %)
[2025-06-03 15:05:33] 2025-06-03 12:45:05,067 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 15:05:33] 2025-06-03 12:45:05,068 | INFO     | sum of deviations: -50824054816.49999
[2025-06-03 15:05:33] 2025-06-03 12:45:05,068 | INFO     | mean x: 1748948337.5
[2025-06-03 15:05:33] 2025-06-03 12:45:05,068 | INFO     | mean y: 2520186.0436893203
[2025-06-03 15:05:33] 2025-06-03 12:45:05,068 | INFO     | -- intersect: 32795164679.91938
[2025-06-03 15:05:33] 2025-06-03 12:45:05,069 | INFO     | intersect: 32795164679.91938
[2025-06-03 15:05:33] 2025-06-03 12:45:05,069 | INFO     | chi2: 0.9769163128866185
[2025-06-03 15:05:33] 2025-06-03 12:45:05,069 | INFO     | current chi2=0.9769163128866185 (change=1.9574218194054205 %)
[2025-06-03 15:05:33] 2025-06-03 12:45:05,069 | INFO     | left removable region: 20
[2025-06-03 15:05:33] 2025-06-03 12:45:05,070 | INFO     | sum of square deviations: 1963274020.0
[2025-06-03 15:05:33] 2025-06-03 12:45:05,071 | INFO     | sum of deviations: -22178220607.0
[2025-06-03 15:05:33] 2025-06-03 12:45:05,071 | INFO     | mean x: 1748948307.0
[2025-06-03 15:05:33] 2025-06-03 12:45:05,071 | INFO     | mean y: 2520703.708108108
[2025-06-03 15:05:33] 2025-06-03 12:45:05,071 | INFO     | -- intersect: 19759600453.01644
[2025-06-03 15:05:33] 2025-06-03 12:45:05,071 | INFO     | intersect: 19759600453.01644
[2025-06-03 15:05:33] 2025-06-03 12:45:05,072 | INFO     | chi2: 0.15455687325815579
[2025-06-03 15:05:33] 2025-06-03 12:45:05,072 | INFO     | -- intersect: 19759600453.01644
[2025-06-03 15:05:33] 2025-06-03 12:45:05,072 | INFO     | current memory leak: -11.30 B/s (using 185 data points, chi2=0.15)
[2025-06-03 15:05:33] 2025-06-03 12:45:05,073 | INFO     | ..............................
[2025-06-03 15:05:33] 2025-06-03 12:45:05,073 | INFO     | . Timing measurements:
[2025-06-03 15:05:33] 2025-06-03 12:45:05,073 | INFO     | . get job = 0 s
[2025-06-03 15:05:33] 2025-06-03 12:45:05,073 | INFO     | . initial setup = 2 s
[2025-06-03 15:05:33] 2025-06-03 12:45:05,073 | INFO     | . payload setup = 15 s
[2025-06-03 15:05:33] 2025-06-03 12:45:05,073 | INFO     | . stage-in = 0 s
[2025-06-03 15:05:33] 2025-06-03 12:45:05,073 | INFO     | . payload execution = 13155 s
[2025-06-03 15:05:33] 2025-06-03 12:45:05,073 | INFO     | . stage-out = 3 s
[2025-06-03 15:05:33] 2025-06-03 12:45:05,074 | INFO     | . log creation = 1 s
[2025-06-03 15:05:33] 2025-06-03 12:45:05,074 | INFO     | ..............................
[2025-06-03 15:05:33] 2025-06-03 12:45:05,199 | INFO     | 
[2025-06-03 15:05:33] 2025-06-03 12:45:05,200 | INFO     | job summary report
[2025-06-03 15:05:33] 2025-06-03 12:45:05,200 | INFO     | --------------------------------------------------
[2025-06-03 15:05:33] 2025-06-03 12:45:05,200 | INFO     | PanDA job id: 6677400396
[2025-06-03 15:05:33] 2025-06-03 12:45:05,200 | INFO     | task id: 45006595
[2025-06-03 15:05:33] 2025-06-03 12:45:05,200 | INFO     | errors: (none)
[2025-06-03 15:05:33] 2025-06-03 12:45:05,200 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:05:33] 2025-06-03 12:45:05,200 | INFO     | pilot state: finished 
[2025-06-03 15:05:33] 2025-06-03 12:45:05,200 | INFO     | transexitcode: 0
[2025-06-03 15:05:33] 2025-06-03 12:45:05,200 | INFO     | exeerrorcode: 0
[2025-06-03 15:05:33] 2025-06-03 12:45:05,200 | INFO     | exeerrordiag: 
[2025-06-03 15:05:33] 2025-06-03 12:45:05,201 | INFO     | exitcode: 0
[2025-06-03 15:05:33] 2025-06-03 12:45:05,201 | INFO     | exitmsg: OK
[2025-06-03 15:05:33] 2025-06-03 12:45:05,201 | INFO     | cpuconsumptiontime: 50214 s
[2025-06-03 15:05:33] 2025-06-03 12:45:05,201 | INFO     | nevents: 400
[2025-06-03 15:05:33] 2025-06-03 12:45:05,201 | INFO     | neventsw: 0
[2025-06-03 15:05:33] 2025-06-03 12:45:05,201 | INFO     | pid: 17539
[2025-06-03 15:05:33] 2025-06-03 12:45:05,201 | INFO     | pgrp: 17539
[2025-06-03 15:05:33] 2025-06-03 12:45:05,201 | INFO     | corecount: 8
[2025-06-03 15:05:33] 2025-06-03 12:45:05,201 | INFO     | event service: False
[2025-06-03 15:05:33] 2025-06-03 12:45:05,201 | INFO     | sizes: {0: 2404354, 1: 2405210, 2: 2405210, 9: 2405444, 12: 2405472, 13174: 2435194, 13178: 2444135, 13179: 2444191, 13267: 2444361}
[2025-06-03 15:05:33] 2025-06-03 12:45:05,201 | INFO     | --------------------------------------------------
[2025-06-03 15:05:33] 2025-06-03 12:45:05,201 | INFO     | 
[2025-06-03 15:05:33] 2025-06-03 12:45:05,202 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-03 15:05:33] 2025-06-03 12:45:05,595 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,595 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,595 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,595 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,596 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,596 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,596 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,596 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,596 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,596 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,596 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,596 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,596 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,596 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,596 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,596 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,597 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,597 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:05:33] 2025-06-03 12:45:05,597 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,597 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:05:33] 2025-06-03 12:45:05,597 | INFO     | job 6677400396 has completed (purged errors)
[2025-06-03 15:05:33] 2025-06-03 12:45:05,597 | INFO     | overall cleanup function is called
[2025-06-03 15:05:33] 2025-06-03 12:45:06,606 | INFO     | --- collectZombieJob: --- 10, [17539]
[2025-06-03 15:05:33] 2025-06-03 12:45:06,607 | INFO     | zombie collector waiting for pid 17539
[2025-06-03 15:05:33] 2025-06-03 12:45:06,607 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:05:33] 2025-06-03 12:45:06,607 | INFO     | collected zombie processes
[2025-06-03 15:05:33] 2025-06-03 12:45:06,607 | INFO     | will attempt to kill all subprocesses of pid=17539
[2025-06-03 15:05:33] 2025-06-03 12:45:06,732 | INFO     | process IDs to be killed: [17539] (in reverse order)
[2025-06-03 15:05:33] 2025-06-03 12:45:07,624 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:05:33] 2025-06-03 12:45:07,624 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:05:33] 2025-06-03 12:45:07,628 | INFO     | did not find any defunct processes belonging to 17539
[2025-06-03 15:05:33] 2025-06-03 12:45:07,631 | INFO     | did not find any defunct processes belonging to 17539
[2025-06-03 15:05:33] 2025-06-03 12:45:07,631 | INFO     | ready for new job
[2025-06-03 15:05:33] 2025-06-03 12:45:07,631 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:05:33] 2025-06-03 12:45:07,634 | INFO     | **************************************
[2025-06-03 15:05:33] 2025-06-03 12:45:07,634 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 15:05:33] 2025-06-03 12:45:07,635 | INFO     | **************************************
[2025-06-03 15:05:33] 2025-06-03 12:45:07,635 | INFO     | 
[2025-06-03 15:05:33] 2025-06-03 12:45:07,635 | INFO     | pilot is running in a VM
[2025-06-03 15:05:33] 2025-06-03 12:45:07,635 | INFO     | architecture information:
[2025-06-03 15:05:33] 2025-06-03 12:45:07,637 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:05:33] 2025-06-03 12:45:07,824 | INFO     | cat /etc/os-release:
[2025-06-03 15:05:33] NAME="CentOS Linux"
[2025-06-03 15:05:33] VERSION="7 (Core)"
[2025-06-03 15:05:33] ID="centos"
[2025-06-03 15:05:33] ID_LIKE="rhel fedora"
[2025-06-03 15:05:33] VERSION_ID="7"
[2025-06-03 15:05:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:05:33] ANSI_COLOR="0;31"
[2025-06-03 15:05:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:05:33] HOME_URL="https://www.centos.org/"
[2025-06-03 15:05:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:05:33] 
[2025-06-03 15:05:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:05:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:05:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:05:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:05:33] 
[2025-06-03 15:05:33] 2025-06-03 12:45:07,824 | INFO     | **************************************
[2025-06-03 15:05:33] 2025-06-03 12:45:08,328 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-03 15:05:33] 2025-06-03 12:45:08,602 | INFO     | sufficient remaining disk space (496386441216 B)
[2025-06-03 15:05:33] 2025-06-03 12:45:08,602 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:05:33] 2025-06-03 12:45:08,603 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:05:33] 2025-06-03 12:45:08,603 | INFO     | update_server=False
[2025-06-03 15:05:33] 2025-06-03 12:45:08,603 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:05:33] 2025-06-03 12:45:08,731 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:05:33] 2025-06-03 12:45:08,937 | INFO     | all job control threads have been joined
[2025-06-03 15:05:33] 2025-06-03 12:45:08,964 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:05:33] 2025-06-03 12:45:08,965 | INFO     | aborting loop
[2025-06-03 15:05:33] 2025-06-03 12:45:09,350 | INFO     | all payload control threads have been joined
[2025-06-03 15:05:33] 2025-06-03 12:45:09,442 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:05:33] 2025-06-03 12:45:09,442 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:05:33] 2025-06-03 12:45:09,442 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:05:33] 2025-06-03 12:45:09,609 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:05:33] 2025-06-03 12:45:09,627 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:05:33] 2025-06-03 12:45:09,636 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:05:33] 2025-06-03 12:45:09,654 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:05:33] 2025-06-03 12:45:09,666 | INFO     | all data control threads have been joined
[2025-06-03 15:05:33] 2025-06-03 12:45:09,881 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:05:33] 2025-06-03 12:45:09,944 | INFO     | [job] control thread has finished
[2025-06-03 15:05:33] 2025-06-03 12:45:09,971 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:05:33] 2025-06-03 12:45:10,176 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:05:33] 2025-06-03 12:45:10,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:05:33] 2025-06-03 12:45:10,256 | INFO     | [job] validate thread has finished
[2025-06-03 15:05:33] 2025-06-03 12:45:10,279 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:05:33] 2025-06-03 12:45:10,356 | INFO     | [payload] control thread has finished
[2025-06-03 15:05:33] 2025-06-03 12:45:10,499 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:05:33] 2025-06-03 12:45:10,672 | INFO     | [data] control thread has finished
[2025-06-03 15:05:33] 2025-06-03 12:45:10,755 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:05:33] 2025-06-03 12:45:11,224 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:05:33] 2025-06-03 12:45:11,663 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:05:33] 2025-06-03 12:45:12,740 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:05:33] 2025-06-03 12:45:13,483 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140093198456640)>', '<ExcThread(monitor, started 140092756711168)>']
[2025-06-03 15:05:33] 2025-06-03 12:45:14,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:05:33] 2025-06-03 12:45:14,471 | INFO     | [monitor] control thread has ended
[2025-06-03 15:05:33] 2025-06-03 12:45:18,509 | INFO     | all workflow threads have been joined
[2025-06-03 15:05:33] 2025-06-03 12:45:18,510 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:05:33] 2025-06-03 12:45:18,510 | INFO     | traces error code: 0
[2025-06-03 15:05:33] 2025-06-03 12:45:18,510 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:05:33] 2025-06-03 12:45:18,760 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:05:33] 2025-06-03 12:45:18,767 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:05:33] 2025-06-03 12:45:18,783 [wrapper] pilotpid: 9017
[2025-06-03 15:05:33] 2025-06-03 12:45:18,792 [wrapper] Pilot exit status: 0
[2025-06-03 15:05:33] 2025-06-03 12:45:19,101 [wrapper] pandaids: 6677400396
[2025-06-03 15:05:33] 2025-06-03 12:45:20,085 [wrapper] cleanup supervisor_pilot  2244 9018
[2025-06-03 15:05:33] 2025-06-03 12:45:20,102 [wrapper] Test setup, not cleaning
[2025-06-03 15:05:33] 2025-06-03 12:45:20,113 [wrapper] apfmon messages muted
[2025-06-03 15:05:33] 2025-06-03 12:45:20,173 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:05:33] 2025-06-03 12:45:20,244 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:05:33]  *** Error codes and diagnostics ***
[2025-06-03 15:05:33]     "exeErrorCode": 0,
[2025-06-03 15:05:33]     "exeErrorDiag": "",
[2025-06-03 15:05:33]     "pilotErrorCode": 0,
[2025-06-03 15:05:33]     "pilotErrorDiag": "",
[2025-06-03 15:05:33]  *** Listing of results directory ***
[2025-06-03 15:05:33] total 395388
[2025-06-03 15:05:33] -rw-r--r--. 1 boinc boinc    495897 Jun  2 22:47 pilot3.tar.gz
[2025-06-03 15:05:33] -rwx------. 1 boinc boinc     37140 Jun  2 22:52 runpilot2-wrapper.sh
[2025-06-03 15:05:33] -rw-r--r--. 1 boinc boinc      5111 Jun  2 22:52 queuedata.json
[2025-06-03 15:05:33] -rw-r--r--. 1 boinc boinc       100 Jun  3 11:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:05:33] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 11:02 run_atlas
[2025-06-03 15:05:33] -rw-r--r--. 1 boinc boinc       105 Jun  3 11:02 job.xml
[2025-06-03 15:05:33] -rw-r--r--. 2 boinc boinc 215210220 Jun  3 11:02 EVNT.45006593._000463.pool.root.1
[2025-06-03 15:05:33] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:02 start_atlas.sh
[2025-06-03 15:05:33] drwxrwx--x. 2 boinc boinc        68 Jun  3 11:02 shared
[2025-06-03 15:05:33] -rw-r--r--. 2 boinc boinc    508874 Jun  3 11:02 input.tar.gz
[2025-06-03 15:05:33] -rw-r--r--. 1 boinc boinc      6392 Jun  3 11:02 init_data.xml
[2025-06-03 15:05:33] -rw-r--r--. 1 boinc boinc         0 Jun  3 11:02 boinc_lockfile
[2025-06-03 15:05:33] -rw-r--r--. 1 boinc boinc      2524 Jun  3 11:02 pandaJob.out
[2025-06-03 15:05:33] -rw-------. 1 boinc boinc    985498 Jun  3 11:03 agis_schedconf.cvmfs.json
[2025-06-03 15:05:33] drwx------. 4 boinc boinc      4096 Jun  3 11:03 pilot3
[2025-06-03 15:05:33] -rw-------. 1 boinc boinc 182773585 Jun  3 14:42 HITS.45006595._011575.pool.root.1
[2025-06-03 15:05:33] -rw-r--r--. 1 boinc boinc       531 Jun  3 14:42 boinc_task_state.xml
[2025-06-03 15:05:33] -rw-------. 1 boinc boinc      1017 Jun  3 14:43 memory_monitor_summary.json
[2025-06-03 15:05:33] -rw-------. 1 boinc boinc   1603667 Jun  3 14:43 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:05:33] -rw-------. 1 boinc boinc    390751 Jun  3 14:43 log.45006595._011575.job.log.tgz.1
[2025-06-03 15:05:33] -rw-------. 1 boinc boinc      7687 Jun  3 14:45 heartbeat.json
[2025-06-03 15:05:33] -rw-------. 1 boinc boinc        95 Jun  3 14:45 pilot_heartbeat.json
[2025-06-03 15:05:33] -rw-------. 1 boinc boinc      4416 Jun  3 14:45 pilotlog.txt
[2025-06-03 15:05:33] -rw-------. 1 boinc boinc   1144356 Jun  3 14:45 log.45006595._011575.job.log.1
[2025-06-03 15:05:33] -rw-------. 1 boinc boinc       357 Jun  3 14:45 output.list
[2025-06-03 15:05:33] -rw-r--r--. 1 boinc boinc       620 Jun  3 14:45 runtime_log
[2025-06-03 15:05:33] -rw-------. 1 boinc boinc   1556480 Jun  3 14:45 result.tar.gz
[2025-06-03 15:05:33] -rw-r--r--. 1 boinc boinc      8659 Jun  3 14:45 runtime_log.err
[2025-06-03 15:05:33] -rw-------. 1 boinc boinc       656 Jun  3 14:45 G6cMDmEKRg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPggKDmXuImGo.diag
[2025-06-03 15:05:33] -rw-r--r--. 1 boinc boinc      8192 Jun  3 15:05 boinc_mmap_file
[2025-06-03 15:05:33] -rw-r--r--. 1 boinc boinc        28 Jun  3 15:05 wrapper_checkpoint.txt
[2025-06-03 15:05:33] -rw-r--r--. 1 boinc boinc     20501 Jun  3 15:05 stderr.txt
[2025-06-03 15:05:33] HITS file was successfully produced:
[2025-06-03 15:05:33] -rw-------. 1 boinc boinc 182773585 Jun  3 14:42 shared/HITS.pool.root.1
[2025-06-03 15:05:33]  *** Contents of shared directory: ***
[2025-06-03 15:05:33] total 390696
[2025-06-03 15:05:33] -rw-r--r--. 2 boinc boinc 215210220 Jun  3 11:02 ATLAS.root_0
[2025-06-03 15:05:33] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:02 start_atlas.sh
[2025-06-03 15:05:33] -rw-r--r--. 2 boinc boinc    508874 Jun  3 11:02 input.tar.gz
[2025-06-03 15:05:33] -rw-------. 1 boinc boinc 182773585 Jun  3 14:42 HITS.pool.root.1
[2025-06-03 15:05:33] -rw-------. 1 boinc boinc   1556480 Jun  3 14:45 result.tar.gz
15:05:35 (3207): run_atlas exited; CPU time 50379.408645
15:05:35 (3207): called boinc_finish(0)

</stderr_txt>
]]>

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