Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:41:46 (25580): wrapper (7.7.26015): starting
14:41:46 (25580): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:41:46] Arguments: --nthreads 8
[2025-06-03 14:41:46] Threads: 8
[2025-06-03 14:41:46] Checking for CVMFS
[2025-06-03 14:41:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:41:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:41:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:41:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:41:48] 2.11.2.0 29033 31797 91064 146741 0 60 14935701 25165824 4251 130560 0 16797331 99.805 18426418 2033 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 14:41:48] CVMFS is ok
[2025-06-03 14:41:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:41:48] Checking for apptainer binary...
[2025-06-03 14:41:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:41:48] Running /usr/bin/apptainer --version
[2025-06-03 14:41:48] apptainer version 1.3.2-1.el7
[2025-06-03 14:41:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:43:31] cg-vwn393.simple-grid.lan
[2025-06-03 14:43:31] apptainer works
[2025-06-03 14:43:31] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:43:31] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:43:31] Starting ATLAS job with PandaID=6677393725
[2025-06-03 14:43:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:52:44]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:52:44] 2025-06-03 16:41:44,002 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6677393725/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:52:44] 2025-06-03 16:41:44,003 | INFO     | extracted standard info from prmon json
[2025-06-03 18:52:44] 2025-06-03 16:41:44,003 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:52:44] 2025-06-03 16:41:44,003 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:52:44] 2025-06-03 16:41:44,004 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:52:44] 2025-06-03 16:41:44,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:52:44] 2025-06-03 16:41:44,009 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:52:44] 2025-06-03 16:41:44,009 | INFO     | sum of square deviations: 3822133120.995676
[2025-06-03 18:52:44] 2025-06-03 16:41:44,011 | INFO     | sum of deviations: -12839578541.701296
[2025-06-03 18:52:44] 2025-06-03 16:41:44,012 | INFO     | mean x: 1748961733.004329
[2025-06-03 18:52:44] 2025-06-03 16:41:44,012 | INFO     | mean y: 2493427.701298701
[2025-06-03 18:52:44] 2025-06-03 16:41:44,012 | INFO     | -- intersect: 5877728754.797719
[2025-06-03 18:52:44] 2025-06-03 16:41:44,012 | INFO     | intersect: 5877728754.797719
[2025-06-03 18:52:44] 2025-06-03 16:41:44,012 | INFO     | chi2: 2.7443170271072015
[2025-06-03 18:52:44] 2025-06-03 16:41:44,013 | INFO     | sum of square deviations: 3579273058.49558
[2025-06-03 18:52:44] 2025-06-03 16:41:44,015 | INFO     | sum of deviations: 2699937448.805316
[2025-06-03 18:52:44] 2025-06-03 16:41:44,015 | INFO     | mean x: 1748961580.5044248
[2025-06-03 18:52:44] 2025-06-03 16:41:44,015 | INFO     | mean y: 2503018.1946902657
[2025-06-03 18:52:44] 2025-06-03 16:41:44,016 | INFO     | -- intersect: -1316783549.3717391
[2025-06-03 18:52:44] 2025-06-03 16:41:44,016 | INFO     | intersect: -1316783549.3717391
[2025-06-03 18:52:44] 2025-06-03 16:41:44,016 | INFO     | chi2: 1.9854738393717453
[2025-06-03 18:52:44] 2025-06-03 16:41:44,016 | INFO     | current chi2=1.9854738393717453 (change=27.651440421785257 %)
[2025-06-03 18:52:44] 2025-06-03 16:41:44,017 | INFO     | sum of square deviations: 3346924820.995481
[2025-06-03 18:52:44] 2025-06-03 16:41:44,019 | INFO     | sum of deviations: 2763056974.167432
[2025-06-03 18:52:44] 2025-06-03 16:41:44,019 | INFO     | mean x: 1748961428.004525
[2025-06-03 18:52:44] 2025-06-03 16:41:44,019 | INFO     | mean y: 2503059.8325791857
[2025-06-03 18:52:44] 2025-06-03 16:41:44,019 | INFO     | -- intersect: -1441353713.0722873
[2025-06-03 18:52:44] 2025-06-03 16:41:44,019 | INFO     | intersect: -1441353713.0722873
[2025-06-03 18:52:44] 2025-06-03 16:41:44,020 | INFO     | chi2: 1.9859059552112366
[2025-06-03 18:52:44] 2025-06-03 16:41:44,020 | INFO     | current chi2=1.9859059552112366 (change=-0.02176386467162181 %)
[2025-06-03 18:52:44] 2025-06-03 16:41:44,020 | INFO     | right removable region: 220
[2025-06-03 18:52:44] 2025-06-03 16:41:44,020 | INFO     | sum of square deviations: 3579272448.49558
[2025-06-03 18:52:44] 2025-06-03 16:41:44,022 | INFO     | sum of deviations: -55103125718.87608
[2025-06-03 18:52:44] 2025-06-03 16:41:44,023 | INFO     | mean x: 1748961885.5044248
[2025-06-03 18:52:44] 2025-06-03 16:41:44,023 | INFO     | mean y: 2519760.8761061947
[2025-06-03 18:52:44] 2025-06-03 16:41:44,023 | INFO     | -- intersect: 26927898602.875114
[2025-06-03 18:52:44] 2025-06-03 16:41:44,023 | INFO     | intersect: 26927898602.875114
[2025-06-03 18:52:44] 2025-06-03 16:41:44,023 | INFO     | chi2: 1.0024287660756726
[2025-06-03 18:52:44] 2025-06-03 16:41:44,023 | INFO     | current chi2=1.0024287660756726 (change=63.472559614136934 %)
[2025-06-03 18:52:44] 2025-06-03 16:41:44,024 | INFO     | sum of square deviations: 3346923600.995481
[2025-06-03 18:52:44] 2025-06-03 16:41:44,025 | INFO     | sum of deviations: -58537673924.51125
[2025-06-03 18:52:44] 2025-06-03 16:41:44,026 | INFO     | mean x: 1748962038.004525
[2025-06-03 18:52:44] 2025-06-03 16:41:44,026 | INFO     | mean y: 2522014.511312217
[2025-06-03 18:52:44] 2025-06-03 16:41:44,026 | INFO     | -- intersect: 30591857682.826668
[2025-06-03 18:52:44] 2025-06-03 16:41:44,026 | INFO     | intersect: 30591857682.826668
[2025-06-03 18:52:44] 2025-06-03 16:41:44,026 | INFO     | chi2: 0.9745185404749751
[2025-06-03 18:52:44] 2025-06-03 16:41:44,026 | INFO     | current chi2=0.9745185404749751 (change=2.7842602432451073 %)
[2025-06-03 18:52:44] 2025-06-03 16:41:44,026 | INFO     | left removable region: 20
[2025-06-03 18:52:44] 2025-06-03 16:41:44,027 | INFO     | sum of square deviations: 2480600441.995003
[2025-06-03 18:52:44] 2025-06-03 16:41:44,028 | INFO     | sum of deviations: -28989916886.629997
[2025-06-03 18:52:44] 2025-06-03 16:41:44,029 | INFO     | mean x: 1748962007.505
[2025-06-03 18:52:44] 2025-06-03 16:41:44,029 | INFO     | mean y: 2523866.63
[2025-06-03 18:52:44] 2025-06-03 16:41:44,029 | INFO     | -- intersect: 20442036162.558887
[2025-06-03 18:52:44] 2025-06-03 16:41:44,029 | INFO     | intersect: 20442036162.558887
[2025-06-03 18:52:44] 2025-06-03 16:41:44,029 | INFO     | chi2: 0.16607423144915232
[2025-06-03 18:52:44] 2025-06-03 16:41:44,030 | INFO     | -- intersect: 20442036162.558887
[2025-06-03 18:52:44] 2025-06-03 16:41:44,030 | INFO     | current memory leak: -11.69 B/s (using 200 data points, chi2=0.17)
[2025-06-03 18:52:44] 2025-06-03 16:41:44,031 | INFO     | ..............................
[2025-06-03 18:52:44] 2025-06-03 16:41:44,031 | INFO     | . Timing measurements:
[2025-06-03 18:52:44] 2025-06-03 16:41:44,031 | INFO     | . get job = 0 s
[2025-06-03 18:52:44] 2025-06-03 16:41:44,031 | INFO     | . initial setup = 5 s
[2025-06-03 18:52:44] 2025-06-03 16:41:44,031 | INFO     | . payload setup = 17 s
[2025-06-03 18:52:44] 2025-06-03 16:41:44,031 | INFO     | . stage-in = 0 s
[2025-06-03 18:52:44] 2025-06-03 16:41:44,031 | INFO     | . payload execution = 14106 s
[2025-06-03 18:52:44] 2025-06-03 16:41:44,031 | INFO     | . stage-out = 3 s
[2025-06-03 18:52:44] 2025-06-03 16:41:44,032 | INFO     | . log creation = 1 s
[2025-06-03 18:52:44] 2025-06-03 16:41:44,032 | INFO     | ..............................
[2025-06-03 18:52:44] 2025-06-03 16:41:44,158 | INFO     | 
[2025-06-03 18:52:44] 2025-06-03 16:41:44,159 | INFO     | job summary report
[2025-06-03 18:52:44] 2025-06-03 16:41:44,159 | INFO     | --------------------------------------------------
[2025-06-03 18:52:44] 2025-06-03 16:41:44,159 | INFO     | PanDA job id: 6677393725
[2025-06-03 18:52:44] 2025-06-03 16:41:44,159 | INFO     | task id: 45006595
[2025-06-03 18:52:44] 2025-06-03 16:41:44,159 | INFO     | errors: (none)
[2025-06-03 18:52:44] 2025-06-03 16:41:44,159 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:52:44] 2025-06-03 16:41:44,159 | INFO     | pilot state: finished 
[2025-06-03 18:52:44] 2025-06-03 16:41:44,159 | INFO     | transexitcode: 0
[2025-06-03 18:52:44] 2025-06-03 16:41:44,160 | INFO     | exeerrorcode: 0
[2025-06-03 18:52:44] 2025-06-03 16:41:44,160 | INFO     | exeerrordiag: 
[2025-06-03 18:52:44] 2025-06-03 16:41:44,160 | INFO     | exitcode: 0
[2025-06-03 18:52:44] 2025-06-03 16:41:44,160 | INFO     | exitmsg: OK
[2025-06-03 18:52:44] 2025-06-03 16:41:44,160 | INFO     | cpuconsumptiontime: 50899 s
[2025-06-03 18:52:44] 2025-06-03 16:41:44,160 | INFO     | nevents: 400
[2025-06-03 18:52:44] 2025-06-03 16:41:44,160 | INFO     | neventsw: 0
[2025-06-03 18:52:44] 2025-06-03 16:41:44,160 | INFO     | pid: 7552
[2025-06-03 18:52:44] 2025-06-03 16:41:44,160 | INFO     | pgrp: 7552
[2025-06-03 18:52:44] 2025-06-03 16:41:44,160 | INFO     | corecount: 8
[2025-06-03 18:52:44] 2025-06-03 16:41:44,160 | INFO     | event service: False
[2025-06-03 18:52:44] 2025-06-03 16:41:44,161 | INFO     | sizes: {0: 2404948, 1: 2405203, 2: 2405231, 11: 2405437, 12: 2405465, 14128: 2435388, 14129: 2435515, 14134: 2444568, 14236: 2444682}
[2025-06-03 18:52:44] 2025-06-03 16:41:44,161 | INFO     | --------------------------------------------------
[2025-06-03 18:52:44] 2025-06-03 16:41:44,161 | INFO     | 
[2025-06-03 18:52:44] 2025-06-03 16:41:44,161 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 18:52:44] 2025-06-03 16:41:44,821 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,822 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,822 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,822 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,822 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,822 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,822 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,823 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,823 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,823 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,823 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,823 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,823 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,823 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,824 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:52:44] 2025-06-03 16:41:44,824 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,824 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:52:44] 2025-06-03 16:41:44,824 | INFO     | job 6677393725 has completed (purged errors)
[2025-06-03 18:52:44] 2025-06-03 16:41:44,824 | INFO     | overall cleanup function is called
[2025-06-03 18:52:44] 2025-06-03 16:41:45,832 | INFO     | --- collectZombieJob: --- 10, [7552]
[2025-06-03 18:52:44] 2025-06-03 16:41:45,833 | INFO     | zombie collector waiting for pid 7552
[2025-06-03 18:52:44] 2025-06-03 16:41:45,833 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:52:44] 2025-06-03 16:41:45,833 | INFO     | collected zombie processes
[2025-06-03 18:52:44] 2025-06-03 16:41:45,833 | INFO     | will attempt to kill all subprocesses of pid=7552
[2025-06-03 18:52:44] 2025-06-03 16:41:45,972 | INFO     | process IDs to be killed: [7552] (in reverse order)
[2025-06-03 18:52:44] 2025-06-03 16:41:46,784 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:52:44] 2025-06-03 16:41:46,785 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:52:44] 2025-06-03 16:41:46,788 | INFO     | did not find any defunct processes belonging to 7552
[2025-06-03 18:52:44] 2025-06-03 16:41:46,795 | INFO     | did not find any defunct processes belonging to 7552
[2025-06-03 18:52:44] 2025-06-03 16:41:46,795 | INFO     | ready for new job
[2025-06-03 18:52:44] 2025-06-03 16:41:46,795 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:52:44] 2025-06-03 16:41:46,797 | INFO     | **************************************
[2025-06-03 18:52:44] 2025-06-03 16:41:46,797 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:52:44] 2025-06-03 16:41:46,797 | INFO     | **************************************
[2025-06-03 18:52:44] 2025-06-03 16:41:46,797 | INFO     | 
[2025-06-03 18:52:44] 2025-06-03 16:41:46,798 | INFO     | pilot is running in a VM
[2025-06-03 18:52:44] 2025-06-03 16:41:46,798 | INFO     | architecture information:
[2025-06-03 18:52:44] 2025-06-03 16:41:46,808 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:52:44] 2025-06-03 16:41:47,066 | INFO     | cat /etc/os-release:
[2025-06-03 18:52:44] NAME="CentOS Linux"
[2025-06-03 18:52:44] VERSION="7 (Core)"
[2025-06-03 18:52:44] ID="centos"
[2025-06-03 18:52:44] ID_LIKE="rhel fedora"
[2025-06-03 18:52:44] VERSION_ID="7"
[2025-06-03 18:52:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:52:44] ANSI_COLOR="0;31"
[2025-06-03 18:52:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:52:44] HOME_URL="https://www.centos.org/"
[2025-06-03 18:52:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:52:44] 
[2025-06-03 18:52:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:52:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:52:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:52:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:52:44] 
[2025-06-03 18:52:44] 2025-06-03 16:41:47,067 | INFO     | **************************************
[2025-06-03 18:52:44] 2025-06-03 16:41:47,571 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 18:52:44] 2025-06-03 16:41:47,819 | INFO     | sufficient remaining disk space (496871931904 B)
[2025-06-03 18:52:44] 2025-06-03 16:41:47,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:52:44] 2025-06-03 16:41:47,820 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:52:44] 2025-06-03 16:41:47,820 | INFO     | update_server=False
[2025-06-03 18:52:44] 2025-06-03 16:41:47,820 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:52:44] 2025-06-03 16:41:47,820 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:52:44] 2025-06-03 16:41:48,148 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:52:44] 2025-06-03 16:41:48,148 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:52:44] 2025-06-03 16:41:48,148 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:52:44] 2025-06-03 16:41:48,156 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:52:44] 2025-06-03 16:41:48,242 | INFO     | all payload control threads have been joined
[2025-06-03 18:52:44] 2025-06-03 16:41:48,306 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:52:44] 2025-06-03 16:41:48,307 | INFO     | aborting loop
[2025-06-03 18:52:44] 2025-06-03 16:41:48,826 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:52:44] 2025-06-03 16:41:48,850 | INFO     | all data control threads have been joined
[2025-06-03 18:52:44] 2025-06-03 16:41:48,883 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:52:44] 2025-06-03 16:41:48,919 | INFO     | all job control threads have been joined
[2025-06-03 18:52:44] 2025-06-03 16:41:49,172 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:52:44] 2025-06-03 16:41:49,206 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:52:44] 2025-06-03 16:41:49,249 | INFO     | [payload] control thread has finished
[2025-06-03 18:52:44] 2025-06-03 16:41:49,313 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:52:44] 2025-06-03 16:41:49,477 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:52:44] 2025-06-03 16:41:49,742 | INFO     | [job] validate thread has finished
[2025-06-03 18:52:44] 2025-06-03 16:41:49,818 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:52:44] 2025-06-03 16:41:49,857 | INFO     | [data] control thread has finished
[2025-06-03 18:52:44] 2025-06-03 16:41:49,926 | INFO     | [job] control thread has finished
[2025-06-03 18:52:44] 2025-06-03 16:41:50,103 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:52:44] 2025-06-03 16:41:50,167 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:52:44] 2025-06-03 16:41:50,179 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:52:44] 2025-06-03 16:41:50,315 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:52:44] 2025-06-03 16:41:50,425 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:52:44] 2025-06-03 16:41:51,830 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:52:44] 2025-06-03 16:41:53,381 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140198306928448)>', '<ExcThread(monitor, started 140197706581760)>']
[2025-06-03 18:52:44] 2025-06-03 16:41:54,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:52:44] 2025-06-03 16:41:54,184 | INFO     | [monitor] control thread has ended
[2025-06-03 18:52:44] 2025-06-03 16:41:58,406 | INFO     | all workflow threads have been joined
[2025-06-03 18:52:44] 2025-06-03 16:41:58,407 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:52:44] 2025-06-03 16:41:58,407 | INFO     | traces error code: 0
[2025-06-03 18:52:44] 2025-06-03 16:41:58,407 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:52:44] 2025-06-03 16:41:58,792 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:52:44] 2025-06-03 16:41:58,885 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:52:44] 2025-06-03 16:41:58,983 [wrapper] pilotpid: 31334
[2025-06-03 18:52:44] 2025-06-03 16:41:59,040 [wrapper] Pilot exit status: 0
[2025-06-03 18:52:44] 2025-06-03 16:41:59,536 [wrapper] pandaids: 6677393725
[2025-06-03 18:52:44] 2025-06-03 16:42:00,233 [wrapper] cleanup supervisor_pilot 20541 31335
[2025-06-03 18:52:44] 2025-06-03 16:42:00,351 [wrapper] Test setup, not cleaning
[2025-06-03 18:52:44] 2025-06-03 16:42:00,434 [wrapper] apfmon messages muted
[2025-06-03 18:52:44] 2025-06-03 16:42:00,534 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:52:44] 2025-06-03 16:42:00,586 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:52:44]  *** Error codes and diagnostics ***
[2025-06-03 18:52:44]     "exeErrorCode": 0,
[2025-06-03 18:52:44]     "exeErrorDiag": "",
[2025-06-03 18:52:44]     "pilotErrorCode": 0,
[2025-06-03 18:52:44]     "pilotErrorDiag": "",
[2025-06-03 18:52:44]  *** Listing of results directory ***
[2025-06-03 18:52:44] total 389460
[2025-06-03 18:52:44] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:02 pilot3.tar.gz
[2025-06-03 18:52:44] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:05 queuedata.json
[2025-06-03 18:52:44] -rwx------. 1 boinc boinc     37140 Jun  2 21:06 runpilot2-wrapper.sh
[2025-06-03 18:52:44] -rw-r--r--. 1 boinc boinc       100 Jun  3 14:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:52:44] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 14:41 run_atlas
[2025-06-03 18:52:44] -rw-r--r--. 1 boinc boinc       105 Jun  3 14:41 job.xml
[2025-06-03 18:52:44] -rw-r--r--. 2 boinc boinc 213055186 Jun  3 14:41 EVNT.45006593._000349.pool.root.1
[2025-06-03 18:52:44] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:41 start_atlas.sh
[2025-06-03 18:52:44] drwxrwx--x. 2 boinc boinc        68 Jun  3 14:41 shared
[2025-06-03 18:52:44] -rw-r--r--. 2 boinc boinc    508874 Jun  3 14:41 input.tar.gz
[2025-06-03 18:52:44] -rw-r--r--. 1 boinc boinc      6392 Jun  3 14:41 init_data.xml
[2025-06-03 18:52:44] -rw-r--r--. 1 boinc boinc         0 Jun  3 14:41 boinc_lockfile
[2025-06-03 18:52:44] -rw-r--r--. 1 boinc boinc      2520 Jun  3 14:43 pandaJob.out
[2025-06-03 18:52:44] -rw-------. 1 boinc boinc    982666 Jun  3 14:44 agis_schedconf.cvmfs.json
[2025-06-03 18:52:44] drwx------. 4 boinc boinc      4096 Jun  3 14:44 pilot3
[2025-06-03 18:52:44] -rw-------. 1 boinc boinc 178710715 Jun  3 18:38 HITS.45006595._008705.pool.root.1
[2025-06-03 18:52:44] -rw-r--r--. 1 boinc boinc       531 Jun  3 18:38 boinc_task_state.xml
[2025-06-03 18:52:44] -rw-------. 1 boinc boinc      1021 Jun  3 18:39 memory_monitor_summary.json
[2025-06-03 18:52:44] -rw-------. 1 boinc boinc   1603667 Jun  3 18:39 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:52:44] -rw-------. 1 boinc boinc    375537 Jun  3 18:40 log.45006595._008705.job.log.tgz.1
[2025-06-03 18:52:44] -rw-------. 1 boinc boinc        95 Jun  3 18:41 pilot_heartbeat.json
[2025-06-03 18:52:44] -rw-------. 1 boinc boinc      7688 Jun  3 18:41 heartbeat.json
[2025-06-03 18:52:44] -rw-------. 1 boinc boinc      4416 Jun  3 18:41 pilotlog.txt
[2025-06-03 18:52:44] -rw-------. 1 boinc boinc   1238124 Jun  3 18:42 log.45006595._008705.job.log.1
[2025-06-03 18:52:44] -rw-------. 1 boinc boinc       357 Jun  3 18:42 output.list
[2025-06-03 18:52:44] -rw-r--r--. 1 boinc boinc       620 Jun  3 18:42 runtime_log
[2025-06-03 18:52:44] -rw-------. 1 boinc boinc   1628160 Jun  3 18:42 result.tar.gz
[2025-06-03 18:52:44] -rw-r--r--. 1 boinc boinc      8659 Jun  3 18:42 runtime_log.err
[2025-06-03 18:52:44] -rw-------. 1 boinc boinc       656 Jun  3 18:42 lCfKDmxfPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0BgKDmVtoUNn.diag
[2025-06-03 18:52:44] -rw-r--r--. 1 boinc boinc      8192 Jun  3 18:52 boinc_mmap_file
[2025-06-03 18:52:44] -rw-r--r--. 1 boinc boinc        28 Jun  3 18:52 wrapper_checkpoint.txt
[2025-06-03 18:52:44] -rw-r--r--. 1 boinc boinc     20563 Jun  3 18:52 stderr.txt
[2025-06-03 18:52:44] HITS file was successfully produced:
[2025-06-03 18:52:44] -rw-------. 1 boinc boinc 178710715 Jun  3 18:38 shared/HITS.pool.root.1
[2025-06-03 18:52:44]  *** Contents of shared directory: ***
[2025-06-03 18:52:44] total 384696
[2025-06-03 18:52:44] -rw-r--r--. 2 boinc boinc 213055186 Jun  3 14:41 ATLAS.root_0
[2025-06-03 18:52:44] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:41 start_atlas.sh
[2025-06-03 18:52:44] -rw-r--r--. 2 boinc boinc    508874 Jun  3 14:41 input.tar.gz
[2025-06-03 18:52:44] -rw-------. 1 boinc boinc 178710715 Jun  3 18:38 HITS.pool.root.1
[2025-06-03 18:52:44] -rw-------. 1 boinc boinc   1628160 Jun  3 18:42 result.tar.gz
18:52:46 (25580): run_atlas exited; CPU time 51079.245274
18:52:46 (25580): called boinc_finish(0)

</stderr_txt>
]]>

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