Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:53:59 (1202355): wrapper (7.7.26015): starting
20:53:59 (1202355): wrapper: running run_atlas (--nthreads 12)
[2025-06-02 20:53:59] Arguments: --nthreads 12
[2025-06-02 20:53:59] Threads: 12
[2025-06-02 20:53:59] Checking for CVMFS
[2025-06-02 20:54:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 20:54:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 20:54:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 20:54:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 20:54:06] 2.8.1.0 1202495 0 29032 146724 3 1 3622825 4096000 0 130560 0 0 100.000 0 0 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-02 20:54:06] CVMFS is ok
[2025-06-02 20:54:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 20:54:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 20:54:06] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-02 20:54:06] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-02 20:54:06] Further information can be found at the LHC@home message board.
[2025-06-02 20:54:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 20:54:06] Checking for apptainer binary...
[2025-06-02 20:54:06] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-06-02 20:54:06] apptainer is not installed, using version from CVMFS
[2025-06-02 20:54:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 20:54:07] farmville.blisteringsheep.pec
[2025-06-02 20:54:07] apptainer works
[2025-06-02 20:54:07] Set ATHENA_PROC_NUMBER=12
[2025-06-02 20:54:07] Set ATHENA_CORE_NUMBER=12
[2025-06-02 20:54:07] Starting ATLAS job with PandaID=6677399010
[2025-06-02 20:54:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 21:49:45]  *** The last 200 lines of the pilot log: ***
[2025-06-02 21:49:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-02 21:49:45]  replicas=None
[2025-06-02 21:49:45]  scope=mc23_13p6TeV
[2025-06-02 21:49:45]  status=None
[2025-06-02 21:49:45]  status_code=0
[2025-06-02 21:49:45]  storage_token=
[2025-06-02 21:49:45]  surl=/var/lib/boinc/slots/13/PanDA_Pilot-6677399010/log.45006595._011097.job.log.tgz.1
[2025-06-02 21:49:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/4b/log.45006595._011097.job.log.tgz.1
[2025-06-02 21:49:45]  workdir=None
[2025-06-02 21:49:45] ]
[2025-06-02 21:49:45] 2025-06-03 01:49:10,335 | INFO     | transferring file log.45006595._011097.job.log.tgz.1 from /var/lib/boinc/slots/13/PanDA_Pilot-6677399010/log.45006595._011097.job.log.tgz.1 to /var/lib/boinc/slots
[2025-06-02 21:49:45] 2025-06-03 01:49:10,335 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/13/PanDA_Pilot-6677399010/log.45006595._011097.job.log.tgz.1 /var/lib/boinc/slots/13/log.45006595._011097.j
[2025-06-02 21:49:45] 2025-06-03 01:49:10,358 | INFO     | adding to output.list: log.45006595._011097.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/4b/log.45006595._011097.job.log.tg
[2025-06-02 21:49:45] 2025-06-03 01:49:10,359 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-02 21:49:45] 2025-06-03 01:49:10,359 | INFO     | summary of transferred files:
[2025-06-02 21:49:45] 2025-06-03 01:49:10,359 | INFO     |  -- lfn=log.45006595._011097.job.log.tgz.1, status_code=0, status=transferred
[2025-06-02 21:49:45] 2025-06-03 01:49:10,360 | INFO     | stage-out finished correctly
[2025-06-02 21:49:45] 2025-06-03 01:49:10,422 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-02 21:49:45] 2025-06-03 01:49:12,074 | INFO     | job 6677399010 has state=finished
[2025-06-02 21:49:45] 2025-06-03 01:49:12,074 | INFO     | preparing for final server update for job 6677399010 in state='finished'
[2025-06-02 21:49:45] 2025-06-03 01:49:12,074 | INFO     | this job has now completed (state=finished)
[2025-06-02 21:49:45] 2025-06-03 01:49:12,074 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-02 21:49:45] 2025-06-03 01:49:12,074 | INFO     | log transfer has been attempted: DONE
[2025-06-02 21:49:45] 2025-06-03 01:49:12,075 | INFO     | job 6677399010 has finished - writing final server update
[2025-06-02 21:49:45] 2025-06-03 01:49:12,075 | INFO     | total number of processed events: 400 (read)
[2025-06-02 21:49:45] 2025-06-03 01:49:12,078 | INFO     | executing command: lscpu
[2025-06-02 21:49:45] 2025-06-03 01:49:12,125 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-02 21:49:45] 2025-06-03 01:49:12,283 | INFO     | monitor loop #248: job 0:6677399010 is in state 'finished'
[2025-06-02 21:49:45] 2025-06-03 01:49:12,284 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 21:49:45] 2025-06-03 01:49:14,786 | INFO     | monitor loop #249: job 0:6677399010 is in state 'finished'
[2025-06-02 21:49:45] 2025-06-03 01:49:14,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 21:49:45] 2025-06-03 01:49:16,303 | INFO     | PID=1206716 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-02 21:49:45] 2025-06-03 01:49:17,289 | INFO     | monitor loop #250: job 0:6677399010 is in state 'finished'
[2025-06-02 21:49:45] 2025-06-03 01:49:17,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 21:49:45] 2025-06-03 01:49:19,792 | INFO     | monitor loop #251: job 0:6677399010 is in state 'finished'
[2025-06-02 21:49:45] 2025-06-03 01:49:19,793 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 21:49:45] 2025-06-03 01:49:22,295 | INFO     | monitor loop #252: job 0:6677399010 is in state 'finished'
[2025-06-02 21:49:45] 2025-06-03 01:49:22,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 21:49:45] 2025-06-03 01:49:23,319 | INFO     | 3301s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-02 21:49:45] 2025-06-03 01:49:24,737 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-02 21:49:45] 2025-06-03 01:49:24,737 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-6677399010/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 21:49:45] 2025-06-03 01:49:24,738 | INFO     | extracted standard info from prmon json
[2025-06-02 21:49:45] 2025-06-03 01:49:24,738 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 21:49:45] 2025-06-03 01:49:24,738 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 21:49:45] 2025-06-03 01:49:24,739 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 21:49:45] 2025-06-03 01:49:24,739 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 21:49:45] 2025-06-03 01:49:24,740 | INFO     | fitting pss+swap vs Time
[2025-06-02 21:49:45] 2025-06-03 01:49:24,740 | INFO     | sum of square deviations: 32179208.0
[2025-06-02 21:49:45] 2025-06-03 01:49:24,741 | INFO     | sum of deviations: -5140945556.0
[2025-06-02 21:49:45] 2025-06-03 01:49:24,741 | INFO     | mean x: 1748913798.0
[2025-06-02 21:49:45] 2025-06-03 01:49:24,741 | INFO     | mean y: 2871241.340425532
[2025-06-02 21:49:45] 2025-06-03 01:49:24,741 | INFO     | -- intersect: 279409083403.4043
[2025-06-02 21:49:45] 2025-06-03 01:49:24,741 | INFO     | intersect: 279409083403.4043
[2025-06-02 21:49:45] 2025-06-03 01:49:24,741 | INFO     | chi2: 0.02719671287018846
[2025-06-02 21:49:45] 2025-06-03 01:49:24,741 | INFO     | -- intersect: 279409083403.4043
[2025-06-02 21:49:45] 2025-06-03 01:49:24,742 | INFO     | current memory leak: -159.76 B/s (using 47 data points, chi2=0.03)
[2025-06-02 21:49:45] 2025-06-03 01:49:24,742 | INFO     | ..............................
[2025-06-02 21:49:45] 2025-06-03 01:49:24,742 | INFO     | . Timing measurements:
[2025-06-02 21:49:45] 2025-06-03 01:49:24,742 | INFO     | . get job = 0 s
[2025-06-02 21:49:45] 2025-06-03 01:49:24,742 | INFO     | . initial setup = 3 s
[2025-06-02 21:49:45] 2025-06-03 01:49:24,742 | INFO     | . payload setup = 6 s
[2025-06-02 21:49:45] 2025-06-03 01:49:24,742 | INFO     | . stage-in = 0 s
[2025-06-02 21:49:45] 2025-06-03 01:49:24,742 | INFO     | . payload execution = 3259 s
[2025-06-02 21:49:45] 2025-06-03 01:49:24,743 | INFO     | . stage-out = 0 s
[2025-06-02 21:49:45] 2025-06-03 01:49:24,743 | INFO     | . log creation = 0 s
[2025-06-02 21:49:45] 2025-06-03 01:49:24,743 | INFO     | ..............................
[2025-06-02 21:49:45] 2025-06-03 01:49:24,808 | INFO     | 
[2025-06-02 21:49:45] 2025-06-03 01:49:24,809 | INFO     | job summary report
[2025-06-02 21:49:45] 2025-06-03 01:49:24,809 | INFO     | --------------------------------------------------
[2025-06-02 21:49:45] 2025-06-03 01:49:24,809 | INFO     | PanDA job id: 6677399010
[2025-06-02 21:49:45] 2025-06-03 01:49:24,809 | INFO     | task id: 45006595
[2025-06-02 21:49:45] 2025-06-03 01:49:24,809 | INFO     | errors: (none)
[2025-06-02 21:49:45] 2025-06-03 01:49:24,809 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 21:49:45] 2025-06-03 01:49:24,809 | INFO     | pilot state: finished 
[2025-06-02 21:49:45] 2025-06-03 01:49:24,809 | INFO     | transexitcode: 0
[2025-06-02 21:49:45] 2025-06-03 01:49:24,809 | INFO     | exeerrorcode: 0
[2025-06-02 21:49:45] 2025-06-03 01:49:24,810 | INFO     | exeerrordiag: 
[2025-06-02 21:49:45] 2025-06-03 01:49:24,810 | INFO     | exitcode: 0
[2025-06-02 21:49:45] 2025-06-03 01:49:24,810 | INFO     | exitmsg: OK
[2025-06-02 21:49:45] 2025-06-03 01:49:24,810 | INFO     | cpuconsumptiontime: 35151 s
[2025-06-02 21:49:45] 2025-06-03 01:49:24,810 | INFO     | nevents: 400
[2025-06-02 21:49:45] 2025-06-03 01:49:24,810 | INFO     | neventsw: 0
[2025-06-02 21:49:45] 2025-06-03 01:49:24,810 | INFO     | pid: 1213590
[2025-06-02 21:49:45] 2025-06-03 01:49:24,810 | INFO     | pgrp: 1213590
[2025-06-02 21:49:45] 2025-06-03 01:49:24,810 | INFO     | corecount: 12
[2025-06-02 21:49:45] 2025-06-03 01:49:24,810 | INFO     | event service: False
[2025-06-02 21:49:45] 2025-06-03 01:49:24,811 | INFO     | sizes: {0: 2405069, 1: 2405211, 4: 2405417, 11: 2405445, 3269: 2430893, 3270: 2430892, 3271: 2440075, 3285: 2440189}
[2025-06-02 21:49:45] 2025-06-03 01:49:24,811 | INFO     | --------------------------------------------------
[2025-06-02 21:49:45] 2025-06-03 01:49:24,811 | INFO     | 
[2025-06-02 21:49:45] 2025-06-03 01:49:24,811 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-06-02 21:49:45] 2025-06-03 01:49:24,833 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,833 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,833 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,833 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,833 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,834 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,834 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,834 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,834 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,834 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,834 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,834 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,834 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,834 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,834 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,834 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 21:49:45] 2025-06-03 01:49:24,834 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,834 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 21:49:45] 2025-06-03 01:49:24,834 | INFO     | job 6677399010 has completed (purged errors)
[2025-06-02 21:49:45] 2025-06-03 01:49:24,835 | INFO     | overall cleanup function is called
[2025-06-02 21:49:45] 2025-06-03 01:49:25,841 | INFO     | --- collectZombieJob: --- 10, [1213590]
[2025-06-02 21:49:45] 2025-06-03 01:49:25,842 | INFO     | zombie collector waiting for pid 1213590
[2025-06-02 21:49:45] 2025-06-03 01:49:25,842 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 21:49:45] 2025-06-03 01:49:25,842 | INFO     | collected zombie processes
[2025-06-02 21:49:45] 2025-06-03 01:49:25,842 | INFO     | will attempt to kill all subprocesses of pid=1213590
[2025-06-02 21:49:45] 2025-06-03 01:49:26,078 | INFO     | process IDs to be killed: [1213590] (in reverse order)
[2025-06-02 21:49:45] 2025-06-03 01:49:26,147 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 21:49:45] 2025-06-03 01:49:26,147 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 21:49:45] 2025-06-03 01:49:26,153 | INFO     | did not find any defunct processes belonging to 1213590
[2025-06-02 21:49:45] 2025-06-03 01:49:26,159 | INFO     | did not find any defunct processes belonging to 1213590
[2025-06-02 21:49:45] 2025-06-03 01:49:26,159 | INFO     | ready for new job
[2025-06-02 21:49:45] 2025-06-03 01:49:26,159 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 21:49:45] 2025-06-03 01:49:26,161 | INFO     | **************************************
[2025-06-02 21:49:45] 2025-06-03 01:49:26,161 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 21:49:45] 2025-06-03 01:49:26,161 | INFO     | **************************************
[2025-06-02 21:49:45] 2025-06-03 01:49:26,161 | INFO     | 
[2025-06-02 21:49:45] 2025-06-03 01:49:26,163 | INFO     | architecture information:
[2025-06-02 21:49:45] 2025-06-03 01:49:26,164 | INFO     | executing command: cat /etc/os-release
[2025-06-02 21:49:45] 2025-06-03 01:49:26,177 | INFO     | cat /etc/os-release:
[2025-06-02 21:49:45] NAME="CentOS Linux"
[2025-06-02 21:49:45] VERSION="7 (Core)"
[2025-06-02 21:49:45] ID="centos"
[2025-06-02 21:49:45] ID_LIKE="rhel fedora"
[2025-06-02 21:49:45] VERSION_ID="7"
[2025-06-02 21:49:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 21:49:45] ANSI_COLOR="0;31"
[2025-06-02 21:49:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 21:49:45] HOME_URL="https://www.centos.org/"
[2025-06-02 21:49:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 21:49:45] 
[2025-06-02 21:49:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 21:49:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 21:49:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 21:49:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 21:49:45] 
[2025-06-02 21:49:45] 2025-06-03 01:49:26,177 | INFO     | **************************************
[2025-06-02 21:49:45] 2025-06-03 01:49:26,680 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-06-02 21:49:45] 2025-06-03 01:49:26,697 | INFO     | sufficient remaining disk space (522524295168 B)
[2025-06-02 21:49:45] 2025-06-03 01:49:26,697 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 21:49:45] 2025-06-03 01:49:26,698 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 21:49:45] 2025-06-03 01:49:26,698 | INFO     | update_server=False
[2025-06-02 21:49:45] 2025-06-03 01:49:26,698 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 21:49:45] 2025-06-03 01:49:26,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 21:49:45] 2025-06-03 01:49:26,698 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 21:49:45] 2025-06-03 01:49:26,698 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-02 21:49:45] 2025-06-03 01:49:26,699 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 21:49:45] 2025-06-03 01:49:26,699 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 21:49:45] 2025-06-03 01:49:26,699 | INFO     | aborting loop
[2025-06-02 21:49:45] 2025-06-03 01:49:26,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 21:49:45] 2025-06-03 01:49:26,700 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 21:49:45] 2025-06-03 01:49:26,886 | INFO     | all payload control threads have been joined
[2025-06-02 21:49:45] 2025-06-03 01:49:26,987 | INFO     | all job control threads have been joined
[2025-06-02 21:49:45] 2025-06-03 01:49:27,158 | INFO     | all data control threads have been joined
[2025-06-02 21:49:45] 2025-06-03 01:49:27,703 | INFO     | [job] retrieve thread has finished
[2025-06-02 21:49:45] 2025-06-03 01:49:27,704 | INFO     | [job] queue monitor thread has finished
[2025-06-02 21:49:45] 2025-06-03 01:49:27,705 | INFO     | [job] job monitor thread has finished
[2025-06-02 21:49:45] 2025-06-03 01:49:27,891 | INFO     | [payload] control thread has finished
[2025-06-02 21:49:45] 2025-06-03 01:49:27,992 | INFO     | [job] control thread has finished
[2025-06-02 21:49:45] 2025-06-03 01:49:28,077 | INFO     | [data] copytool_in thread has finished
[2025-06-02 21:49:45] 2025-06-03 01:49:28,110 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 21:49:45] 2025-06-03 01:49:28,164 | INFO     | [data] control thread has finished
[2025-06-02 21:49:45] 2025-06-03 01:49:28,267 | INFO     | [payload] validate_post thread has finished
[2025-06-02 21:49:45] 2025-06-03 01:49:28,403 | INFO     | [job] validate thread has finished
[2025-06-02 21:49:45] 2025-06-03 01:49:28,676 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 21:49:45] 2025-06-03 01:49:28,703 | INFO     | [data] copytool_out thread has finished
[2025-06-02 21:49:45] 2025-06-03 01:49:28,842 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 21:49:45] 2025-06-03 01:49:29,287 | INFO     | [payload] failed_post thread has finished
[2025-06-02 21:49:45] 2025-06-03 01:49:30,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 21:49:45] 2025-06-03 01:49:34,035 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 21:49:45] 2025-06-03 01:49:37,744 | INFO     | job.realtimelogging is not enabled
[2025-06-02 21:49:45] 2025-06-03 01:49:38,749 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 21:49:45] 2025-06-03 01:49:40,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140686706816832)>', '<ExcThread(monitor, started 140686301042432)>']
[2025-06-02 21:49:45] 2025-06-03 01:49:40,769 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 21:49:45] 2025-06-03 01:49:40,770 | INFO     | [monitor] control thread has ended
[2025-06-02 21:49:45] 2025-06-03 01:49:45,750 | INFO     | all workflow threads have been joined
[2025-06-02 21:49:45] 2025-06-03 01:49:45,750 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 21:49:45] 2025-06-03 01:49:45,750 | INFO     | traces error code: 0
[2025-06-02 21:49:45] 2025-06-03 01:49:45,750 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 21:49:45] 2025-06-03 01:49:45,848 [wrapper] ==== pilot stdout END ====
[2025-06-02 21:49:45] 2025-06-03 01:49:45,850 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 21:49:45] 2025-06-03 01:49:45,853 [wrapper] pilotpid: 1206716
[2025-06-02 21:49:45] 2025-06-03 01:49:45,855 [wrapper] Pilot exit status: 0
[2025-06-02 21:49:45] 2025-06-03 01:49:45,864 [wrapper] pandaids: 6677399010
[2025-06-02 21:49:45] 2025-06-03 01:49:45,901 [wrapper] cleanup supervisor_pilot 1232912 1206717
[2025-06-02 21:49:45] 2025-06-03 01:49:45,903 [wrapper] Test setup, not cleaning
[2025-06-02 21:49:45] 2025-06-03 01:49:45,905 [wrapper] apfmon messages muted
[2025-06-02 21:49:45] 2025-06-03 01:49:45,907 [wrapper] ==== wrapper stdout END ====
[2025-06-02 21:49:45] 2025-06-03 01:49:45,908 [wrapper] ==== wrapper stderr END ====
[2025-06-02 21:49:45]  *** Error codes and diagnostics ***
[2025-06-02 21:49:45]     "exeErrorCode": 0,
[2025-06-02 21:49:45]     "exeErrorDiag": "",
[2025-06-02 21:49:45]     "pilotErrorCode": 0,
[2025-06-02 21:49:45]     "pilotErrorDiag": "",
[2025-06-02 21:49:45]  *** Listing of results directory ***
[2025-06-02 21:49:45] total 398788
[2025-06-02 21:49:45] -rw-r--r-- 1 boinc boinc    495897 Jun  2 16:11 pilot3.tar.gz
[2025-06-02 21:49:45] -rw-r--r-- 1 boinc boinc      5111 Jun  2 16:29 queuedata.json
[2025-06-02 21:49:45] -rwx------ 1 boinc boinc     37140 Jun  2 16:31 runpilot2-wrapper.sh
[2025-06-02 21:49:45] -rw-r--r-- 1 boinc boinc       100 Jun  2 20:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 21:49:45] -rwxr-xr-x 1 boinc boinc      7986 Jun  2 20:53 run_atlas
[2025-06-02 21:49:45] -rw-r--r-- 1 boinc boinc       105 Jun  2 20:53 job.xml
[2025-06-02 21:49:45] -rw-r--r-- 2 boinc boinc 214227731 Jun  2 20:53 EVNT.45006593._000444.pool.root.1
[2025-06-02 21:49:45] -rw-r--r-- 1 boinc boinc      9666 Jun  2 20:53 init_data.xml
[2025-06-02 21:49:45] drwxrwx--x 1 boinc boinc        76 Jun  2 20:53 shared
[2025-06-02 21:49:45] -rw-r--r-- 2 boinc boinc    508885 Jun  2 20:53 input.tar.gz
[2025-06-02 21:49:45] -rw-r--r-- 2 boinc boinc     15093 Jun  2 20:53 start_atlas.sh
[2025-06-02 21:49:45] -rw-r--r-- 1 boinc boinc         0 Jun  2 20:53 boinc_lockfile
[2025-06-02 21:49:45] -rw-r--r-- 1 boinc boinc      2524 Jun  2 20:54 pandaJob.out
[2025-06-02 21:49:45] -rw------- 1 boinc boinc    988073 Jun  2 20:54 agis_schedconf.cvmfs.json
[2025-06-02 21:49:45] -rw------- 1 boinc boinc   1603667 Jun  2 20:54 agis_ddmendpoints.agis.ALL.json
[2025-06-02 21:49:45] drwx------ 1 boinc boinc       368 Jun  2 20:54 pilot3
[2025-06-02 21:49:45] -rw------- 1 boinc boinc 188929895 Jun  2 21:48 HITS.45006595._011097.pool.root.1
[2025-06-02 21:49:45] -rw-r--r-- 1 boinc boinc       529 Jun  2 21:48 boinc_task_state.xml
[2025-06-02 21:49:45] -rw------- 1 boinc boinc      1032 Jun  2 21:49 memory_monitor_summary.json
[2025-06-02 21:49:45] -rw------- 1 boinc boinc    359324 Jun  2 21:49 log.45006595._011097.job.log.tgz.1
[2025-06-02 21:49:45] -rw------- 1 boinc boinc        95 Jun  2 21:49 pilot_heartbeat.json
[2025-06-02 21:49:45] -rw------- 1 boinc boinc      7724 Jun  2 21:49 heartbeat.json
[2025-06-02 21:49:45] -rw-r--r-- 1 boinc boinc      8192 Jun  2 21:49 boinc_mmap_file
[2025-06-02 21:49:45] -rw-r--r-- 1 boinc boinc        27 Jun  2 21:49 wrapper_checkpoint.txt
[2025-06-02 21:49:45] -rw------- 1 boinc boinc      4550 Jun  2 21:49 pilotlog.txt
[2025-06-02 21:49:45] -rw------- 1 boinc boinc    330449 Jun  2 21:49 log.45006595._011097.job.log.1
[2025-06-02 21:49:45] -rw------- 1 boinc boinc       357 Jun  2 21:49 output.list
[2025-06-02 21:49:45] -rw-r--r-- 1 boinc boinc       620 Jun  2 21:49 runtime_log
[2025-06-02 21:49:45] -rw------- 1 boinc boinc    706560 Jun  2 21:49 result.tar.gz
[2025-06-02 21:49:45] -rw-r--r-- 1 boinc boinc      8760 Jun  2 21:49 runtime_log.err
[2025-06-02 21:49:45] -rw------- 1 boinc boinc       674 Jun  2 21:49 Ed7LDm8zQg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFagKDmgX0uwm.diag
[2025-06-02 21:49:45] -rw-r--r-- 1 boinc boinc     22256 Jun  2 21:49 stderr.txt
[2025-06-02 21:49:45] HITS file was successfully produced:
[2025-06-02 21:49:45] -rw------- 1 boinc boinc 188929895 Jun  2 21:48 shared/HITS.pool.root.1
[2025-06-02 21:49:45]  *** Contents of shared directory: ***
[2025-06-02 21:49:45] total 394920
[2025-06-02 21:49:45] -rw-r--r-- 2 boinc boinc 214227731 Jun  2 20:53 ATLAS.root_0
[2025-06-02 21:49:45] -rw-r--r-- 2 boinc boinc    508885 Jun  2 20:53 input.tar.gz
[2025-06-02 21:49:45] -rw-r--r-- 2 boinc boinc     15093 Jun  2 20:53 start_atlas.sh
[2025-06-02 21:49:45] -rw------- 1 boinc boinc 188929895 Jun  2 21:48 HITS.pool.root.1
[2025-06-02 21:49:45] -rw------- 1 boinc boinc    706560 Jun  2 21:49 result.tar.gz
21:49:47 (1202355): run_atlas exited; CPU time 35212.915008
21:49:47 (1202355): called boinc_finish(0)

</stderr_txt>
]]>

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