Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-03 09:13:09 (281358): Detected: vboxwrapper 26206
2025-06-03 09:13:09 (281358): Detected: BOINC client v8.0.2
2025-06-03 09:13:09 (281358): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-06-03 09:13:09 (281358): Successfully copied 'init_data.xml' to the shared directory.
2025-06-03 09:13:09 (281358): Create VM. (boinc_6710c72a20035e85, slot#5)
2025-06-03 09:13:09 (281358): Setting Memory Size for VM. (4000MB)
2025-06-03 09:13:09 (281358): Setting CPU Count for VM. (4)
2025-06-03 09:13:09 (281358): Setting Chipset Options for VM.
2025-06-03 09:13:09 (281358): Setting Graphics Controller Options for VM.
2025-06-03 09:13:09 (281358): Setting Boot Options for VM.
2025-06-03 09:13:09 (281358): Setting Network Configuration for NAT.
2025-06-03 09:13:09 (281358): Enabling VM Network Access.
2025-06-03 09:13:09 (281358): Disabling USB Support for VM.
2025-06-03 09:13:10 (281358): Disabling COM Port Support for VM.
2025-06-03 09:13:10 (281358): Disabling LPT Port Support for VM.
2025-06-03 09:13:10 (281358): Disabling Audio Support for VM.
2025-06-03 09:13:10 (281358): Disabling Clipboard Support for VM.
2025-06-03 09:13:10 (281358): Disabling Drag and Drop Support for VM.
2025-06-03 09:13:10 (281358): Adding storage controller(s) to VM.
2025-06-03 09:13:10 (281358): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-03 09:13:10 (281358): Adding VirtualBox Guest Additions to VM.
2025-06-03 09:13:10 (281358): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-03 09:13:10 (281358): forwarding host port 45981 to guest port 80
2025-06-03 09:13:10 (281358): Enabling remote desktop for VM.
2025-06-03 09:13:10 (281358): Required extension pack not installed, remote desktop not enabled.
2025-06-03 09:13:10 (281358): Enabling shared directory for VM.
2025-06-03 09:13:11 (281358): Starting VM using VBoxManage interface. (boinc_6710c72a20035e85, slot#5)
2025-06-03 09:13:12 (281358): Successfully started VM. (PID = '281849')
2025-06-03 09:13:12 (281358): Reporting VM Process ID to BOINC.
2025-06-03 09:13:12 (281358): Guest Log: BIOS: VirtualBox 7.1.8
2025-06-03 09:13:12 (281358): Guest Log: CPUID EDX: 0x178bfbff
2025-06-03 09:13:12 (281358): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-03 09:13:12 (281358): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-03 09:13:12 (281358): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-03 09:13:12 (281358): Detected: Web Application Enabled (http://localhost:45981)
2025-06-03 09:13:12 (281358): Preference change detected
2025-06-03 09:13:12 (281358): Setting CPU throttle for VM. (100%)
2025-06-03 09:13:12 (281358): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-03 09:13:14 (281358): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-03 09:13:14 (281358): Guest Log: BIOS: Booting from Hard Disk...
2025-06-03 09:13:17 (281358): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-03 09:13:17 (281358): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-03 09:13:17 (281358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-03 09:13:24 (281358): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-03 09:13:24 (281358): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-03 09:13:31 (281358): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-03 09:13:31 (281358): Guest Log: 00:00:00.000205 main     Log opened 2025-06-03T07:13:29.568916000Z
2025-06-03 09:13:31 (281358): Guest Log: 00:00:00.000315 main     OS Product: Linux
2025-06-03 09:13:31 (281358): Guest Log: 00:00:00.000356 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-03 09:13:31 (281358): Guest Log: 00:00:00.000388 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-03 09:13:31 (281358): Guest Log: 00:00:00.000419 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-03 09:13:31 (281358): Guest Log: 00:00:00.000420 main     Process ID: 1291
2025-06-03 09:13:31 (281358): Guest Log: 00:00:00.000421 main     Package type: LINUX_64BITS_GENERIC
2025-06-03 09:13:31 (281358): Guest Log: 00:00:00.001854 main     5.2.32 r132073 started. Verbose level = 0
2025-06-03 09:13:39 (281358): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-03 09:13:39 (281358): Guest Log: [INFO] Mounting shared directory
2025-06-03 09:13:39 (281358): Guest Log: [INFO] Checking for init_data.xml
2025-06-03 09:15:21 (281358): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-03 09:15:21 (281358): Guest Log: [INFO] Detected branch: prod
2025-06-03 09:15:21 (281358): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-03 09:15:21 (281358): Guest Log: Copying input files
2025-06-03 09:15:23 (281358): Guest Log: Copied input files into RunAtlas.
2025-06-03 09:15:23 (281358): Guest Log: Detected user-configured HTTP proxy at http://172.19.229.100:3128 - will set in /etc/cvmfs/default.local
2025-06-03 09:15:31 (281358): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-03 09:15:31 (281358): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-03 09:15:31 (281358): Guest Log: 2.6.3.0 1609 1 31648 146731 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://172.19.229.100:3128 1
2025-06-03 09:15:32 (281358): Guest Log: copied the webapp to /var/www
2025-06-03 09:15:32 (281358): Guest Log: ATHENA_PROC_NUMBER=4
2025-06-03 09:15:32 (281358): Guest Log: ATHENA_CORE_NUMBER=4
2025-06-03 09:15:32 (281358): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-03 09:15:32 (281358): Guest Log:  *** Starting ATLAS job. (PandaID=6677394192 taskID=45006595) ***
2025-06-03 10:52:16 (281358): Status Report: Elapsed Time: '6000.000000'
2025-06-03 10:52:16 (281358): Status Report: CPU Time: '20334.680000'
2025-06-03 12:03:38 (281358): Guest Log:  *** Job finished ***
2025-06-03 12:03:38 (281358): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:02:49,569 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:02:50,138 | INFO     | [job] queue monitor thread has finished
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:02:53,586 | INFO     | [data] queue_monitor thread has finished
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:02:55,307 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139925909231424)>', '<ExcThread(monitor, started 139924649006848)>']
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:02:55,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:02:55,541 | INFO     | [monitor] control thread has ended
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:03:00,313 | INFO     | all workflow threads have been joined
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:03:00,314 | INFO     | end of generic workflow (traces error code: 0)
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:03:00,314 | INFO     | traces error code: 0
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:03:00,314 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:03:00,448 [wrapper] ==== pilot stdout END ====
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:03:00,455 [wrapper] ==== wrapper stdout RESUME ====
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:03:00,462 [wrapper] pilotpid: 5913
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:03:00,473 [wrapper] Pilot exit status: 0
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:03:00,493 [wrapper] pandaids: 6677394192
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:03:00,519 [wrapper] cleanup supervisor_pilot  8222 5914
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:03:00,523 [wrapper] Test setup, not cleaning
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:03:00,528 [wrapper] apfmon messages muted
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:03:00,535 [wrapper] ==== wrapper stdout END ====
2025-06-03 12:03:38 (281358): Guest Log: 2025-06-03 10:03:00,539 [wrapper] ==== wrapper stderr END ====
2025-06-03 12:03:38 (281358): Guest Log:  *** Error codes and diagnostics ***
2025-06-03 12:03:38 (281358): Guest Log:     "exeErrorCode": 0,
2025-06-03 12:03:38 (281358): Guest Log:     "exeErrorDiag": "",
2025-06-03 12:03:38 (281358): Guest Log:     "pilotErrorCode": 0,
2025-06-03 12:03:38 (281358): Guest Log:     "pilotErrorDiag": "",
2025-06-03 12:03:38 (281358): Guest Log:  *** Listing of results directory ***
2025-06-03 12:03:38 (281358): Guest Log: total 185048
2025-06-03 12:03:38 (281358): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  2 19:18 queuedata.json
2025-06-03 12:03:38 (281358): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  2 19:18 pilot3.tar.gz
2025-06-03 12:03:38 (281358): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  2 19:18 runpilot2-wrapper.sh
2025-06-03 12:03:38 (281358): Guest Log: -rw-r--r--. 1 atlas atlas    508877 Jun  3 07:15 input.tar.gz
2025-06-03 12:03:38 (281358): Guest Log: -rw-r--r--. 1 atlas atlas     15093 Jun  3 07:15 start_atlas.sh
2025-06-03 12:03:38 (281358): Guest Log: -rw-r--r--. 1 atlas atlas      9491 Jun  3 07:15 init_data.xml
2025-06-03 12:03:38 (281358): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  3 07:15 EVNT.45006593._000365.pool.root.1 -> /data/./ATLAS.root_0
2025-06-03 12:03:38 (281358): Guest Log: -rw-r--r--. 1 atlas atlas      2521 Jun  3 07:15 pandaJob.out
2025-06-03 12:03:38 (281358): Guest Log: -rw-------. 1 atlas atlas    986901 Jun  3 07:16 agis_schedconf.cvmfs.json
2025-06-03 12:03:38 (281358): Guest Log: -rw-------. 1 atlas atlas   1603667 Jun  3 07:16 agis_ddmendpoints.agis.ALL.json
2025-06-03 12:03:38 (281358): Guest Log: drwx------. 4 atlas atlas      4096 Jun  3 07:16 pilot3
2025-06-03 12:03:38 (281358): Guest Log: -rw-------. 1 atlas atlas 183470802 Jun  3 10:01 HITS.45006595._009120.pool.root.1
2025-06-03 12:03:38 (281358): Guest Log: -rw-------. 1 atlas atlas      1033 Jun  3 10:02 memory_monitor_summary.json
2025-06-03 12:03:38 (281358): Guest Log: -rw-------. 1 atlas atlas    294148 Jun  3 10:02 log.45006595._009120.job.log.tgz.1
2025-06-03 12:03:38 (281358): Guest Log: -rw-------. 1 atlas atlas        95 Jun  3 10:02 pilot_heartbeat.json
2025-06-03 12:03:38 (281358): Guest Log: -rw-------. 1 atlas atlas      7685 Jun  3 10:02 heartbeat.json
2025-06-03 12:03:38 (281358): Guest Log: -rw-------. 1 atlas atlas      4599 Jun  3 10:03 pilotlog.txt
2025-06-03 12:03:38 (281358): Guest Log: -rw-------. 1 atlas atlas    833547 Jun  3 10:03 log.45006595._009120.job.log.1
2025-06-03 12:03:38 (281358): Guest Log: -rw-------. 1 atlas atlas       357 Jun  3 10:03 output.list
2025-06-03 12:03:38 (281358): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  3 10:03 runtime_log
2025-06-03 12:03:38 (281358): Guest Log: -rw-------. 1 atlas atlas   1146880 Jun  3 10:03 result.tar.gz
2025-06-03 12:03:38 (281358): Guest Log: -rw-r--r--. 1 atlas atlas      8580 Jun  3 10:03 runtime_log.err
2025-06-03 12:03:38 (281358): Guest Log: -rw-------. 1 atlas atlas       656 Jun  3 10:03 mssNDmArPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiHgKDm56XFzm.diag
2025-06-03 12:03:38 (281358): Guest Log: Looking for outputfile HITS.45006595._009120.pool.root.1
2025-06-03 12:03:38 (281358): Guest Log: HITS file was successfully produced
2025-06-03 12:03:38 (281358): Guest Log: -rw-------. 1 atlas atlas 183470802 Jun  3 10:01 /home/atlas/RunAtlas/HITS.45006595._009120.pool.root.1
2025-06-03 12:03:38 (281358): Guest Log: Successfully finished the ATLAS job!
2025-06-03 12:03:38 (281358): Guest Log: Copying the results back to the shared directory!
2025-06-03 12:03:38 (281358): Guest Log:  *** Contents of shared directory: ***
2025-06-03 12:03:38 (281358): Guest Log: total 214616
2025-06-03 12:03:38 (281358): Guest Log: -rw-r--r--. 1 root root 218078486 Jun  3 07:13 ATLAS.root_0
2025-06-03 12:03:38 (281358): Guest Log: -rw-r--r--. 1 root root      9491 Jun  3 07:13 init_data.xml
2025-06-03 12:03:38 (281358): Guest Log: -rw-r--r--. 1 root root    508877 Jun  3 07:13 input.tar.gz
2025-06-03 12:03:38 (281358): Guest Log: -rw-r--r--. 1 root root   1146880 Jun  3  2025 result.tar.gz
2025-06-03 12:03:38 (281358): Guest Log: -rw-r--r--. 1 root root     15093 Jun  3 07:13 start_atlas.sh
2025-06-03 12:03:38 (281358): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-03 12:03:38 (281358): VM Completion File Detected.
2025-06-03 12:03:38 (281358): Powering off VM.
2025-06-03 12:03:38 (281358): Successfully stopped VM.
2025-06-03 12:03:38 (281358): Deregistering VM. (boinc_6710c72a20035e85, slot#5)
2025-06-03 12:03:38 (281358): Removing network bandwidth throttle group from VM.
2025-06-03 12:03:38 (281358): Removing VM from VirtualBox.
12:03:44 (281358): called boinc_finish(0)

</stderr_txt>
]]>

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