Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:47:34 (2223059): wrapper (7.7.26015): starting
17:47:34 (2223059): wrapper: running run_atlas (--nthreads 12)
[2025-06-02 17:47:34] Arguments: --nthreads 12
[2025-06-02 17:47:34] Threads: 12
[2025-06-02 17:47:34] Checking for CVMFS
[2025-06-02 17:47:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 17:47:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 17:47:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 17:47:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 17:47:35] 2.11.5.0 2021947 21143 333140 146724 0 479 22918494 45568000 11733 130560 0 170192536 99.793 106037522 25628 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-02 17:47:35] CVMFS is ok
[2025-06-02 17:47:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 17:47:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 17:47:35] Further information can be found at the LHC@home message board.
[2025-06-02 17:47:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 17:47:35] Checking for apptainer binary...
[2025-06-02 17:47:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 17:47:35] Running /usr/bin/apptainer --version
[2025-06-02 17:47:35] apptainer version 1.4.0-1.el9
[2025-06-02 17:47:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 17:47:35] wns0136.triumf.lcg
[2025-06-02 17:47:35] apptainer works
[2025-06-02 17:47:35] Set ATHENA_PROC_NUMBER=12
[2025-06-02 17:47:35] Set ATHENA_CORE_NUMBER=12
[2025-06-02 17:47:35] Starting ATLAS job with PandaID=6677418598
[2025-06-02 17:47:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 17:50:53]  *** The last 200 lines of the pilot log: ***
[2025-06-02 17:50:53] 2025-06-03 00:50:41,115 | INFO     | extracted standard info from prmon json
[2025-06-02 17:50:53] 2025-06-03 00:50:41,115 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 17:50:53] 2025-06-03 00:50:41,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 17:50:53] 2025-06-03 00:50:41,116 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 17:50:53] 2025-06-03 00:50:41,117 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 17:50:53] 2025-06-03 00:50:41,117 | WARNING  | found no stored workdir sizes
[2025-06-02 17:50:53] 2025-06-03 00:50:41,117 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 17:50:53] 2025-06-03 00:50:41,118 | WARNING  | wrong length of table data, x=[1748911699.0], y=[3088.0] (must be same and length>=4)
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | ..............................
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | . Timing measurements:
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | . get job = 0 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | . initial setup = 3 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | . payload setup = 8 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | . stage-in = 0 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | . payload execution = 20 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,120 | INFO     | . stage-out = 0 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,120 | INFO     | . log creation = 0 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,120 | INFO     | ..............................
[2025-06-02 17:50:53] 2025-06-03 00:50:41,120 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 17:50:53] 2025-06-03 00:50:41,120 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677418598/pilotlog.txt
[2025-06-02 17:50:53] 2025-06-03 00:50:41,136 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 17:50:53] - Log from pilotlog.txt -
[2025-06-02 17:50:53] 2025-06-03 00:50:41,115 | INFO     | extracted standard info from prmon json
[2025-06-02 17:50:53] 2025-06-03 00:50:41,115 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 17:50:53] 2025-06-03 00:50:41,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 17:50:53] 2025-06-03 00:50:41,116 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 17:50:53] 2025-06-03 00:50:41,117 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 17:50:53] 2025-06-03 00:50:41,117 | WARNING  | found no stored workdir sizes
[2025-06-02 17:50:53] 2025-06-03 00:50:41,117 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 17:50:53] 2025-06-03 00:50:41,118 | WARNING  | wrong length of table data, x=[1748911699.0], y=[3088.0] (must be same and length>=4)
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | ..............................
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | . Timing measurements:
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | . get job = 0 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | . initial setup = 3 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | . payload setup = 8 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | . stage-in = 0 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | . payload execution = 20 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,120 | INFO     | . stage-out = 0 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,120 | INFO     | . log creation = 0 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,120 | INFO     | ..............................
[2025-06-02 17:50:53] 2025-06-03 00:50:41,120 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 17:50:53] 2025-06-03 00:50:41,120 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677418598/pilotlog.txt
[2025-06-02 17:50:53] 2025-06-03 00:50:41,137 | WARNING  | 
[2025-06-02 17:50:53] [begin log extracts]
[2025-06-02 17:50:53] - Log from pilotlog.txt -
[2025-06-02 17:50:53] 2025-06-03 00:50:41,115 | INFO     | extracted standard info from prmon json
[2025-06-02 17:50:53] 2025-06-03 00:50:41,115 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 17:50:53] 2025-06-03 00:50:41,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 17:50:53] 2025-06-03 00:50:41,116 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 17:50:53] 2025-06-03 00:50:41,117 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 17:50:53] 2025-06-03 00:50:41,117 | WARNING  | found no stored workdir sizes
[2025-06-02 17:50:53] 2025-06-03 00:50:41,117 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 17:50:53] 2025-06-03 00:50:41,118 | WARNING  | wrong length of table data, x=[1748911699.0], y=[3088.0] (must be same and length>=4)
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | ..............................
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | . Timing measurements:
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | . get job = 0 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | . initial setup = 3 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | . payload setup = 8 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | . stage-in = 0 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,119 | INFO     | . payload execution = 20 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,120 | INFO     | . stage-out = 0 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,120 | INFO     | . log creation = 0 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,120 | INFO     | ..............................
[2025-06-02 17:50:53] 2025-06-03 00:50:41,120 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 17:50:53] 2025-06-03 00:50:41,120 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677418598/pilotlog.txt
[2025-06-02 17:50:53] [end log extracts]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,137 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 17:50:53] 2025-06-03 00:50:41,139 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 17:50:53] 2025-06-03 00:50:41,231 | INFO     | 
[2025-06-02 17:50:53] 2025-06-03 00:50:41,231 | INFO     | job summary report
[2025-06-02 17:50:53] 2025-06-03 00:50:41,231 | INFO     | --------------------------------------------------
[2025-06-02 17:50:53] 2025-06-03 00:50:41,231 | INFO     | PanDA job id: 6677418598
[2025-06-02 17:50:53] 2025-06-03 00:50:41,231 | INFO     | task id: 45006595
[2025-06-02 17:50:53] 2025-06-03 00:50:41,232 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 17:48:30,669 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 17:50:53] 2025-06-03 00:50:41,232 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 17:50:53] 2025-06-03 00:50:41,232 | INFO     | pilot state: failed 
[2025-06-02 17:50:53] 2025-06-03 00:50:41,232 | INFO     | transexitcode: 65
[2025-06-02 17:50:53] 2025-06-03 00:50:41,232 | INFO     | exeerrorcode: 65
[2025-06-02 17:50:53] 2025-06-03 00:50:41,232 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 17:50:53] 2025-06-03 00:50:41,232 | INFO     | exitcode: 65
[2025-06-02 17:50:53] 2025-06-03 00:50:41,233 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 17:50:53] 2025-06-03 00:50:41,233 | INFO     | cpuconsumptiontime: 27 s
[2025-06-02 17:50:53] 2025-06-03 00:50:41,233 | INFO     | nevents: 0
[2025-06-02 17:50:53] 2025-06-03 00:50:41,233 | INFO     | neventsw: 0
[2025-06-02 17:50:53] 2025-06-03 00:50:41,233 | INFO     | pid: 2233002
[2025-06-02 17:50:53] 2025-06-03 00:50:41,233 | INFO     | pgrp: 2233002
[2025-06-02 17:50:53] 2025-06-03 00:50:41,233 | INFO     | corecount: 12
[2025-06-02 17:50:53] 2025-06-03 00:50:41,233 | INFO     | event service: False
[2025-06-02 17:50:53] 2025-06-03 00:50:41,233 | INFO     | sizes: {0: 2405179, 6: 2405385, 11: 2405413, 32: 2432852, 35: 2432852, 155: 2432994}
[2025-06-02 17:50:53] 2025-06-03 00:50:41,234 | INFO     | --------------------------------------------------
[2025-06-02 17:50:53] 2025-06-03 00:50:41,234 | INFO     | 
[2025-06-02 17:50:53] 2025-06-03 00:50:41,234 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 17:50:53] 2025-06-03 00:50:41,252 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,253 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,253 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,254 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,254 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,254 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,254 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,254 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,254 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,254 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,254 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 17:50:53] 2025-06-03 00:50:41,254 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,254 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 17:50:53] 2025-06-03 00:50:41,255 | INFO     | job 6677418598 has completed (purged errors)
[2025-06-02 17:50:53] 2025-06-03 00:50:41,255 | INFO     | overall cleanup function is called
[2025-06-02 17:50:53] 2025-06-03 00:50:42,259 | INFO     | --- collectZombieJob: --- 10, [2233002]
[2025-06-02 17:50:53] 2025-06-03 00:50:42,260 | INFO     | zombie collector waiting for pid 2233002
[2025-06-02 17:50:53] 2025-06-03 00:50:42,260 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 17:50:53] 2025-06-03 00:50:42,260 | INFO     | collected zombie processes
[2025-06-02 17:50:53] 2025-06-03 00:50:42,260 | INFO     | will attempt to kill all subprocesses of pid=2233002
[2025-06-02 17:50:53] 2025-06-03 00:50:42,468 | INFO     | process IDs to be killed: [2233002] (in reverse order)
[2025-06-02 17:50:53] 2025-06-03 00:50:42,547 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 17:50:53] 2025-06-03 00:50:42,547 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 17:50:53] 2025-06-03 00:50:42,554 | INFO     | did not find any defunct processes belonging to 2233002
[2025-06-02 17:50:53] 2025-06-03 00:50:42,560 | INFO     | did not find any defunct processes belonging to 2233002
[2025-06-02 17:50:53] 2025-06-03 00:50:42,561 | INFO     | ready for new job
[2025-06-02 17:50:53] 2025-06-03 00:50:42,561 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 17:50:53] 2025-06-03 00:50:42,562 | INFO     | **************************************
[2025-06-02 17:50:53] 2025-06-03 00:50:42,562 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 17:50:53] 2025-06-03 00:50:42,562 | INFO     | **************************************
[2025-06-02 17:50:53] 2025-06-03 00:50:42,562 | INFO     | 
[2025-06-02 17:50:53] 2025-06-03 00:50:42,565 | INFO     | architecture information:
[2025-06-02 17:50:53] 2025-06-03 00:50:42,565 | INFO     | executing command: cat /etc/os-release
[2025-06-02 17:50:53] 2025-06-03 00:50:42,582 | INFO     | cat /etc/os-release:
[2025-06-02 17:50:53] NAME="CentOS Linux"
[2025-06-02 17:50:53] VERSION="7 (Core)"
[2025-06-02 17:50:53] ID="centos"
[2025-06-02 17:50:53] ID_LIKE="rhel fedora"
[2025-06-02 17:50:53] VERSION_ID="7"
[2025-06-02 17:50:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 17:50:53] ANSI_COLOR="0;31"
[2025-06-02 17:50:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 17:50:53] HOME_URL="https://www.centos.org/"
[2025-06-02 17:50:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 17:50:53] 
[2025-06-02 17:50:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 17:50:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 17:50:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 17:50:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 17:50:53] 
[2025-06-02 17:50:53] 2025-06-03 00:50:42,582 | INFO     | **************************************
[2025-06-02 17:50:53] 2025-06-03 00:50:43,086 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 17:50:53] 2025-06-03 00:50:43,099 | INFO     | sufficient remaining disk space (1997379993600 B)
[2025-06-02 17:50:53] 2025-06-03 00:50:43,100 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 17:50:53] 2025-06-03 00:50:43,101 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 17:50:53] 2025-06-03 00:50:43,101 | INFO     | update_server=False
[2025-06-02 17:50:53] 2025-06-03 00:50:43,101 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 17:50:53] 2025-06-03 00:50:43,101 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 17:50:53] 2025-06-03 00:50:43,102 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 17:50:53] 2025-06-03 00:50:43,102 | INFO     | aborting loop
[2025-06-02 17:50:53] 2025-06-03 00:50:43,273 | INFO     | all data control threads have been joined
[2025-06-02 17:50:53] 2025-06-03 00:50:43,441 | INFO     | all payload control threads have been joined
[2025-06-02 17:50:53] 2025-06-03 00:50:43,790 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 17:50:53] 2025-06-03 00:50:43,847 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 17:50:53] 2025-06-03 00:50:43,847 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 17:50:53] 2025-06-03 00:50:43,847 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 17:50:53] 2025-06-03 00:50:43,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 17:50:53] 2025-06-03 00:50:44,106 | INFO     | [job] retrieve thread has finished
[2025-06-02 17:50:53] 2025-06-03 00:50:44,107 | INFO     | [job] job monitor thread has finished
[2025-06-02 17:50:53] 2025-06-03 00:50:44,108 | INFO     | [job] queue monitor thread has finished
[2025-06-02 17:50:53] 2025-06-03 00:50:44,274 | INFO     | [data] control thread has finished
[2025-06-02 17:50:53] 2025-06-03 00:50:44,428 | INFO     | [payload] validate_post thread has finished
[2025-06-02 17:50:53] 2025-06-03 00:50:44,446 | INFO     | [payload] control thread has finished
[2025-06-02 17:50:53] 2025-06-03 00:50:44,613 | INFO     | all job control threads have been joined
[2025-06-02 17:50:53] 2025-06-03 00:50:44,747 | INFO     | [job] validate thread has finished
[2025-06-02 17:50:53] 2025-06-03 00:50:44,919 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 17:50:53] 2025-06-03 00:50:44,934 | INFO     | [data] copytool_in thread has finished
[2025-06-02 17:50:53] 2025-06-03 00:50:44,975 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 17:50:53] 2025-06-03 00:50:45,106 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 17:50:53] 2025-06-03 00:50:45,249 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 17:50:53] 2025-06-03 00:50:45,427 | INFO     | [payload] failed_post thread has finished
[2025-06-02 17:50:53] 2025-06-03 00:50:45,618 | INFO     | [job] control thread has finished
[2025-06-02 17:50:53] 2025-06-03 00:50:45,795 | INFO     | [data] copytool_out thread has finished
[2025-06-02 17:50:53] 2025-06-03 00:50:47,888 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 17:50:53] 2025-06-03 00:50:47,931 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139961541289792)>', '<ExcThread(monitor, started 139961005225728)>']
[2025-06-02 17:50:53] 2025-06-03 00:50:48,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 17:50:53] 2025-06-03 00:50:48,873 | INFO     | [monitor] control thread has ended
[2025-06-02 17:50:53] 2025-06-03 00:50:52,956 | INFO     | all workflow threads have been joined
[2025-06-02 17:50:53] 2025-06-03 00:50:52,957 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 17:50:53] 2025-06-03 00:50:52,957 | INFO     | traces error code: 0
[2025-06-02 17:50:53] 2025-06-03 00:50:52,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 17:50:53] 2025-06-03 00:50:53,104 [wrapper] ==== pilot stdout END ====
[2025-06-02 17:50:53] 2025-06-03 00:50:53,108 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 17:50:53] 2025-06-03 00:50:53,111 [wrapper] pilotpid: 2226654
[2025-06-02 17:50:53] 2025-06-03 00:50:53,114 [wrapper] Pilot exit status: 0
[2025-06-02 17:50:53] 2025-06-03 00:50:53,126 [wrapper] pandaids: 6677418598
[2025-06-02 17:50:53] 2025-06-03 00:50:53,172 [wrapper] cleanup supervisor_pilot 2226660 2226655
[2025-06-02 17:50:53] 2025-06-03 00:50:53,176 [wrapper] Test setup, not cleaning
[2025-06-02 17:50:53] 2025-06-03 00:50:53,181 [wrapper] apfmon messages muted
[2025-06-02 17:50:53] 2025-06-03 00:50:53,185 [wrapper] ==== wrapper stdout END ====
[2025-06-02 17:50:53] 2025-06-03 00:50:53,189 [wrapper] ==== wrapper stderr END ====
[2025-06-02 17:50:53]  *** Error codes and diagnostics ***
[2025-06-02 17:50:53]     "exeErrorCode": 65,
[2025-06-02 17:50:53]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 17:50:53]     "pilotErrorCode": 1305,
[2025-06-02 17:50:53]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 17:50:53]  *** Listing of results directory ***
[2025-06-02 17:50:53] total 213600
[2025-06-02 17:50:53] -rw-r--r--. 1 boinc boinc    495897 Jun  2 15:22 pilot3.tar.gz
[2025-06-02 17:50:53] -rw-r--r--. 1 boinc boinc      5111 Jun  2 15:35 queuedata.json
[2025-06-02 17:50:53] -rwx------. 1 boinc boinc     37140 Jun  2 15:37 runpilot2-wrapper.sh
[2025-06-02 17:50:53] -rw-r--r--. 1 boinc boinc       100 Jun  2 17:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 17:50:53] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 17:47 run_atlas
[2025-06-02 17:50:53] -rw-r--r--. 1 boinc boinc       105 Jun  2 17:47 job.xml
[2025-06-02 17:50:53] -rw-r--r--. 1 boinc boinc      6597 Jun  2 17:47 init_data.xml
[2025-06-02 17:50:53] -rw-r--r--. 2 boinc boinc 214700422 Jun  2 17:47 EVNT.45006593._000537.pool.root.1
[2025-06-02 17:50:53] -rw-r--r--. 2 boinc boinc     15093 Jun  2 17:47 start_atlas.sh
[2025-06-02 17:50:53] drwxrwx--x. 2 boinc boinc      4096 Jun  2 17:47 shared
[2025-06-02 17:50:53] -rw-r--r--. 2 boinc boinc    508871 Jun  2 17:47 input.tar.gz
[2025-06-02 17:50:53] -rw-r--r--. 1 boinc boinc         0 Jun  2 17:47 boinc_lockfile
[2025-06-02 17:50:53] -rw-r--r--. 1 boinc boinc      2524 Jun  2 17:47 pandaJob.out
[2025-06-02 17:50:53] -rw-------. 1 boinc boinc    988073 Jun  2 17:47 agis_schedconf.cvmfs.json
[2025-06-02 17:50:53] -rw-------. 1 boinc boinc   1603667 Jun  2 17:47 agis_ddmendpoints.agis.ALL.json
[2025-06-02 17:50:53] drwx------. 4 boinc boinc      4096 Jun  2 17:47 pilot3
[2025-06-02 17:50:53] -rw-------. 1 boinc boinc       977 Jun  2 17:48 memory_monitor_summary.json
[2025-06-02 17:50:53] -rw-------. 1 boinc boinc     20441 Jun  2 17:48 log.45006595._013408.job.log.tgz.1
[2025-06-02 17:50:53] -rw-r--r--. 1 boinc boinc       522 Jun  2 17:48 boinc_task_state.xml
[2025-06-02 17:50:53] -rw-------. 1 boinc boinc        95 Jun  2 17:49 pilot_heartbeat.json
[2025-06-02 17:50:53] -rw-------. 1 boinc boinc      8339 Jun  2 17:50 heartbeat.json
[2025-06-02 17:50:53] -rw-r--r--. 1 boinc boinc      8192 Jun  2 17:50 boinc_mmap_file
[2025-06-02 17:50:53] -rw-r--r--. 1 boinc boinc        22 Jun  2 17:50 wrapper_checkpoint.txt
[2025-06-02 17:50:53] -rw-------. 1 boinc boinc      4352 Jun  2 17:50 pilotlog.txt
[2025-06-02 17:50:53] -rw-------. 1 boinc boinc     73411 Jun  2 17:50 log.45006595._013408.job.log.1
[2025-06-02 17:50:53] -rw-------. 1 boinc boinc       188 Jun  2 17:50 output.list
[2025-06-02 17:50:53] -rw-r--r--. 1 boinc boinc       620 Jun  2 17:50 runtime_log
[2025-06-02 17:50:53] -rw-------. 1 boinc boinc    112640 Jun  2 17:50 result.tar.gz
[2025-06-02 17:50:53] -rw-r--r--. 1 boinc boinc      8484 Jun  2 17:50 runtime_log.err
[2025-06-02 17:50:53] -rw-------. 1 boinc boinc       644 Jun  2 17:50 7itKDm8xSg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUygKDmIzMZJm.diag
[2025-06-02 17:50:53] -rw-r--r--. 1 boinc boinc     21426 Jun  2 17:50 stderr.txt
[2025-06-02 17:50:53] No HITS result produced
[2025-06-02 17:50:53]  *** Contents of shared directory: ***
[2025-06-02 17:50:53] total 210304
[2025-06-02 17:50:53] -rw-r--r--. 2 boinc boinc 214700422 Jun  2 17:47 ATLAS.root_0
[2025-06-02 17:50:53] -rw-r--r--. 2 boinc boinc     15093 Jun  2 17:47 start_atlas.sh
[2025-06-02 17:50:53] -rw-r--r--. 2 boinc boinc    508871 Jun  2 17:47 input.tar.gz
[2025-06-02 17:50:53] -rw-------. 1 boinc boinc    112640 Jun  2 17:50 result.tar.gz
17:50:54 (2223059): run_atlas exited; CPU time 28.329497
17:50:54 (2223059): called boinc_finish(0)

</stderr_txt>
]]>

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