Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:41:34 (24298): wrapper (7.7.26015): starting
10:41:34 (24298): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 10:41:34] Arguments: --nthreads 8
[2025-06-03 10:41:34] Threads: 8
[2025-06-03 10:41:34] Checking for CVMFS
[2025-06-03 10:41:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:41:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:41:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:41:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:41:35] 2.11.2.0 14372 31529 99132 146735 0 16 22041900 25165825 4639 130560 0 16021565 99.833 18063429 2158 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 10:41:35] CVMFS is ok
[2025-06-03 10:41:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:41:35] Checking for apptainer binary...
[2025-06-03 10:41:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:41:35] Running /usr/bin/apptainer --version
[2025-06-03 10:41:35] apptainer version 1.3.2-1.el7
[2025-06-03 10:41:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:45:00] cg-vwn440.simple-grid.lan
[2025-06-03 10:45:00] apptainer works
[2025-06-03 10:45:00] Set ATHENA_PROC_NUMBER=8
[2025-06-03 10:45:00] Set ATHENA_CORE_NUMBER=8
[2025-06-03 10:45:00] Starting ATLAS job with PandaID=6677418576
[2025-06-03 10:45:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/31 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:48:15]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:48:15] 2025-06-03 12:34:50,132 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:48:15] 2025-06-03 12:34:50,133 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:48:15] 2025-06-03 12:34:50,133 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:48:15] 2025-06-03 12:34:50,137 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:48:15] 2025-06-03 12:34:50,138 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 14:48:15] 2025-06-03 12:34:50,140 | INFO     | sum of deviations: 45682958986.99999
[2025-06-03 14:48:15] 2025-06-03 12:34:50,140 | INFO     | mean x: 1748947487.5
[2025-06-03 14:48:15] 2025-06-03 12:34:50,140 | INFO     | mean y: 2428049.803738318
[2025-06-03 14:48:15] 2025-06-03 12:34:50,140 | INFO     | -- intersect: -26289397111.25032
[2025-06-03 14:48:15] 2025-06-03 12:34:50,140 | INFO     | intersect: -26289397111.25032
[2025-06-03 14:48:15] 2025-06-03 12:34:50,141 | INFO     | chi2: 8.261800591182274
[2025-06-03 14:48:15] 2025-06-03 12:34:50,141 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 14:48:15] 2025-06-03 12:34:50,143 | INFO     | sum of deviations: 73449601203.0
[2025-06-03 14:48:15] 2025-06-03 12:34:50,143 | INFO     | mean x: 1748947335.0
[2025-06-03 14:48:15] 2025-06-03 12:34:50,143 | INFO     | mean y: 2448101.5789473685
[2025-06-03 14:48:15] 2025-06-03 12:34:50,144 | INFO     | -- intersect: -45376960775.37546
[2025-06-03 14:48:15] 2025-06-03 12:34:50,144 | INFO     | intersect: -45376960775.37546
[2025-06-03 14:48:15] 2025-06-03 12:34:50,144 | INFO     | chi2: 6.739381229401115
[2025-06-03 14:48:15] 2025-06-03 12:34:50,144 | INFO     | current chi2=6.739381229401115 (change=18.427210206525924 %)
[2025-06-03 14:48:15] 2025-06-03 12:34:50,144 | INFO     | right removable region: 208
[2025-06-03 14:48:15] 2025-06-03 12:34:50,145 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 14:48:15] 2025-06-03 12:34:50,147 | INFO     | sum of deviations: -27833018512.000008
[2025-06-03 14:48:15] 2025-06-03 12:34:50,147 | INFO     | mean x: 1748947640.0
[2025-06-03 14:48:15] 2025-06-03 12:34:50,147 | INFO     | mean y: 2481882.3540669857
[2025-06-03 14:48:15] 2025-06-03 12:34:50,147 | INFO     | -- intersect: 17198574535.171032
[2025-06-03 14:48:15] 2025-06-03 12:34:50,147 | INFO     | intersect: 17198574535.171032
[2025-06-03 14:48:15] 2025-06-03 12:34:50,148 | INFO     | chi2: 3.4007080319500878
[2025-06-03 14:48:15] 2025-06-03 12:34:50,148 | INFO     | current chi2=3.4007080319500878 (change=58.8381734173102 %)
[2025-06-03 14:48:15] 2025-06-03 12:34:50,148 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 14:48:15] 2025-06-03 12:34:50,150 | INFO     | sum of deviations: -64876200439.499985
[2025-06-03 14:48:15] 2025-06-03 12:34:50,150 | INFO     | mean x: 1748947792.5
[2025-06-03 14:48:15] 2025-06-03 12:34:50,150 | INFO     | mean y: 2510175.6715686275
[2025-06-03 14:48:15] 2025-06-03 12:34:50,150 | INFO     | -- intersect: 43105139361.448425
[2025-06-03 14:48:15] 2025-06-03 12:34:50,150 | INFO     | intersect: 43105139361.448425
[2025-06-03 14:48:15] 2025-06-03 12:34:50,151 | INFO     | chi2: 1.9277216215994555
[2025-06-03 14:48:15] 2025-06-03 12:34:50,151 | INFO     | current chi2=1.9277216215994555 (change=43.31410978277865 %)
[2025-06-03 14:48:15] 2025-06-03 12:34:50,151 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 14:48:15] 2025-06-03 12:34:50,153 | INFO     | sum of deviations: -65836634551.00001
[2025-06-03 14:48:15] 2025-06-03 12:34:50,153 | INFO     | mean x: 1748947945.0
[2025-06-03 14:48:15] 2025-06-03 12:34:50,153 | INFO     | mean y: 2510893.336683417
[2025-06-03 14:48:15] 2025-06-03 12:34:50,153 | INFO     | -- intersect: 47123871241.16046
[2025-06-03 14:48:15] 2025-06-03 12:34:50,153 | INFO     | intersect: 47123871241.16046
[2025-06-03 14:48:15] 2025-06-03 12:34:50,154 | INFO     | chi2: 1.8934913447069328
[2025-06-03 14:48:15] 2025-06-03 12:34:50,154 | INFO     | current chi2=1.8934913447069328 (change=1.7756856855774314 %)
[2025-06-03 14:48:15] 2025-06-03 12:34:50,154 | INFO     | left removable region: 30
[2025-06-03 14:48:15] 2025-06-03 12:34:50,154 | INFO     | sum of square deviations: 1748737904.5
[2025-06-03 14:48:15] 2025-06-03 12:34:50,155 | INFO     | sum of deviations: -19031237744.000008
[2025-06-03 14:48:15] 2025-06-03 12:34:50,155 | INFO     | mean x: 1748948219.5
[2025-06-03 14:48:15] 2025-06-03 12:34:50,156 | INFO     | mean y: 2517333.2359550563
[2025-06-03 14:48:15] 2025-06-03 12:34:50,156 | INFO     | -- intersect: 19036043902.08263
[2025-06-03 14:48:15] 2025-06-03 12:34:50,156 | INFO     | intersect: 19036043902.08263
[2025-06-03 14:48:15] 2025-06-03 12:34:50,156 | INFO     | chi2: 0.137939257763464
[2025-06-03 14:48:15] 2025-06-03 12:34:50,156 | INFO     | -- intersect: 19036043902.08263
[2025-06-03 14:48:15] 2025-06-03 12:34:50,156 | INFO     | current memory leak: -10.88 B/s (using 178 data points, chi2=0.14)
[2025-06-03 14:48:15] 2025-06-03 12:34:50,157 | INFO     | ..............................
[2025-06-03 14:48:15] 2025-06-03 12:34:50,157 | INFO     | . Timing measurements:
[2025-06-03 14:48:15] 2025-06-03 12:34:50,157 | INFO     | . get job = 0 s
[2025-06-03 14:48:15] 2025-06-03 12:34:50,157 | INFO     | . initial setup = 8 s
[2025-06-03 14:48:15] 2025-06-03 12:34:50,158 | INFO     | . payload setup = 152 s
[2025-06-03 14:48:15] 2025-06-03 12:34:50,158 | INFO     | . stage-in = 0 s
[2025-06-03 14:48:15] 2025-06-03 12:34:50,158 | INFO     | . payload execution = 13153 s
[2025-06-03 14:48:15] 2025-06-03 12:34:50,158 | INFO     | . stage-out = 5 s
[2025-06-03 14:48:15] 2025-06-03 12:34:50,158 | INFO     | . log creation = 1 s
[2025-06-03 14:48:15] 2025-06-03 12:34:50,158 | INFO     | ..............................
[2025-06-03 14:48:15] 2025-06-03 12:34:50,311 | INFO     | 
[2025-06-03 14:48:15] 2025-06-03 12:34:50,311 | INFO     | job summary report
[2025-06-03 14:48:15] 2025-06-03 12:34:50,312 | INFO     | --------------------------------------------------
[2025-06-03 14:48:15] 2025-06-03 12:34:50,312 | INFO     | PanDA job id: 6677418576
[2025-06-03 14:48:15] 2025-06-03 12:34:50,312 | INFO     | task id: 45006595
[2025-06-03 14:48:15] 2025-06-03 12:34:50,312 | INFO     | errors: (none)
[2025-06-03 14:48:15] 2025-06-03 12:34:50,312 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:48:15] 2025-06-03 12:34:50,312 | INFO     | pilot state: finished 
[2025-06-03 14:48:15] 2025-06-03 12:34:50,312 | INFO     | transexitcode: 0
[2025-06-03 14:48:15] 2025-06-03 12:34:50,312 | INFO     | exeerrorcode: 0
[2025-06-03 14:48:15] 2025-06-03 12:34:50,312 | INFO     | exeerrordiag: 
[2025-06-03 14:48:15] 2025-06-03 12:34:50,312 | INFO     | exitcode: 0
[2025-06-03 14:48:15] 2025-06-03 12:34:50,312 | INFO     | exitmsg: OK
[2025-06-03 14:48:15] 2025-06-03 12:34:50,312 | INFO     | cpuconsumptiontime: 47760 s
[2025-06-03 14:48:15] 2025-06-03 12:34:50,312 | INFO     | nevents: 400
[2025-06-03 14:48:15] 2025-06-03 12:34:50,313 | INFO     | neventsw: 0
[2025-06-03 14:48:15] 2025-06-03 12:34:50,313 | INFO     | pid: 11677
[2025-06-03 14:48:15] 2025-06-03 12:34:50,313 | INFO     | pgrp: 11677
[2025-06-03 14:48:15] 2025-06-03 12:34:50,313 | INFO     | corecount: 8
[2025-06-03 14:48:15] 2025-06-03 12:34:50,313 | INFO     | event service: False
[2025-06-03 14:48:15] 2025-06-03 12:34:50,313 | INFO     | sizes: {0: 2405013, 1: 2405212, 12: 2405212, 22: 2405240, 33: 2405268, 44: 2405324, 55: 2405480, 65: 2405508, 76: 2405536, 87: 2405592, 92: 2405826, 98: 2406134, 1
[2025-06-03 14:48:15] 2025-06-03 12:34:50,313 | INFO     | --------------------------------------------------
[2025-06-03 14:48:15] 2025-06-03 12:34:50,313 | INFO     | 
[2025-06-03 14:48:15] 2025-06-03 12:34:50,313 | INFO     | executing command: ls -lF /var/lib/boinc/slots/31
[2025-06-03 14:48:15] 2025-06-03 12:34:50,698 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,698 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,698 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,699 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,699 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,699 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,699 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,699 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,699 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,699 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,699 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,699 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,699 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,699 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,699 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,700 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,700 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,700 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:48:15] 2025-06-03 12:34:50,700 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,700 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:48:15] 2025-06-03 12:34:50,700 | INFO     | job 6677418576 has completed (purged errors)
[2025-06-03 14:48:15] 2025-06-03 12:34:50,700 | INFO     | overall cleanup function is called
[2025-06-03 14:48:15] 2025-06-03 12:34:51,709 | INFO     | --- collectZombieJob: --- 10, [11677]
[2025-06-03 14:48:15] 2025-06-03 12:34:51,710 | INFO     | zombie collector waiting for pid 11677
[2025-06-03 14:48:15] 2025-06-03 12:34:51,710 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:48:15] 2025-06-03 12:34:51,710 | INFO     | collected zombie processes
[2025-06-03 14:48:15] 2025-06-03 12:34:51,710 | INFO     | will attempt to kill all subprocesses of pid=11677
[2025-06-03 14:48:15] 2025-06-03 12:34:51,776 | INFO     | 13602s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 14:48:15] 2025-06-03 12:34:51,815 | INFO     | process IDs to be killed: [11677] (in reverse order)
[2025-06-03 14:48:15] 2025-06-03 12:34:52,791 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:48:15] 2025-06-03 12:34:52,792 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:48:15] 2025-06-03 12:34:52,795 | INFO     | did not find any defunct processes belonging to 11677
[2025-06-03 14:48:15] 2025-06-03 12:34:52,801 | INFO     | did not find any defunct processes belonging to 11677
[2025-06-03 14:48:15] 2025-06-03 12:34:52,801 | INFO     | ready for new job
[2025-06-03 14:48:15] 2025-06-03 12:34:52,802 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:48:15] 2025-06-03 12:34:52,816 | INFO     | **************************************
[2025-06-03 14:48:15] 2025-06-03 12:34:52,816 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:48:15] 2025-06-03 12:34:52,816 | INFO     | **************************************
[2025-06-03 14:48:15] 2025-06-03 12:34:52,817 | INFO     | 
[2025-06-03 14:48:15] 2025-06-03 12:34:52,817 | INFO     | pilot is running in a VM
[2025-06-03 14:48:15] 2025-06-03 12:34:52,817 | INFO     | architecture information:
[2025-06-03 14:48:15] 2025-06-03 12:34:52,833 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:48:15] 2025-06-03 12:34:53,124 | INFO     | cat /etc/os-release:
[2025-06-03 14:48:15] NAME="CentOS Linux"
[2025-06-03 14:48:15] VERSION="7 (Core)"
[2025-06-03 14:48:15] ID="centos"
[2025-06-03 14:48:15] ID_LIKE="rhel fedora"
[2025-06-03 14:48:15] VERSION_ID="7"
[2025-06-03 14:48:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:48:15] ANSI_COLOR="0;31"
[2025-06-03 14:48:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:48:15] HOME_URL="https://www.centos.org/"
[2025-06-03 14:48:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:48:15] 
[2025-06-03 14:48:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:48:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:48:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:48:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:48:15] 
[2025-06-03 14:48:15] 2025-06-03 12:34:53,124 | INFO     | **************************************
[2025-06-03 14:48:15] 2025-06-03 12:34:53,627 | INFO     | executing command: df -mP /var/lib/boinc/slots/31
[2025-06-03 14:48:15] 2025-06-03 12:34:53,837 | INFO     | sufficient remaining disk space (496381198336 B)
[2025-06-03 14:48:15] 2025-06-03 12:34:53,837 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:48:15] 2025-06-03 12:34:53,838 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:48:15] 2025-06-03 12:34:53,838 | INFO     | update_server=False
[2025-06-03 14:48:15] 2025-06-03 12:34:53,838 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:48:15] 2025-06-03 12:34:53,839 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:48:15] 2025-06-03 12:34:54,073 | INFO     | all job control threads have been joined
[2025-06-03 14:48:15] 2025-06-03 12:34:54,244 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 14:48:15] 2025-06-03 12:34:54,244 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 14:48:15] 2025-06-03 12:34:54,245 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:48:15] 2025-06-03 12:34:54,245 | INFO     | will abort loop
[2025-06-03 14:48:15] 2025-06-03 12:34:54,646 | INFO     | all data control threads have been joined
[2025-06-03 14:48:15] 2025-06-03 12:34:54,793 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:48:15] 2025-06-03 12:34:54,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:48:15] 2025-06-03 12:34:54,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:48:15] 2025-06-03 12:34:54,844 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:48:15] 2025-06-03 12:34:55,029 | INFO     | all payload control threads have been joined
[2025-06-03 14:48:15] 2025-06-03 12:34:55,079 | INFO     | [job] control thread has finished
[2025-06-03 14:48:15] 2025-06-03 12:34:55,141 | INFO     | [job] validate thread has finished
[2025-06-03 14:48:15] 2025-06-03 12:34:55,250 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:48:15] 2025-06-03 12:34:55,256 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:48:15] 2025-06-03 12:34:55,260 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:48:15] 2025-06-03 12:34:55,307 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:48:15] 2025-06-03 12:34:55,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:48:15] 2025-06-03 12:34:55,649 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:48:15] 2025-06-03 12:34:55,652 | INFO     | [data] control thread has finished
[2025-06-03 14:48:15] 2025-06-03 12:34:55,848 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:48:15] 2025-06-03 12:34:55,859 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:48:15] 2025-06-03 12:34:55,896 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:48:15] 2025-06-03 12:34:56,035 | INFO     | [payload] control thread has finished
[2025-06-03 14:48:15] 2025-06-03 12:34:56,105 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:48:15] 2025-06-03 12:34:56,331 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:48:15] 2025-06-03 12:34:56,812 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:48:15] 2025-06-03 12:35:00,822 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:48:15] 2025-06-03 12:35:01,202 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139870907238208)>', '<ExcThread(monitor, started 139870030784256)>']
[2025-06-03 14:48:15] 2025-06-03 12:35:01,836 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:48:15] 2025-06-03 12:35:01,836 | INFO     | [monitor] control thread has ended
[2025-06-03 14:48:15] 2025-06-03 12:35:06,228 | INFO     | all workflow threads have been joined
[2025-06-03 14:48:15] 2025-06-03 12:35:06,228 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:48:15] 2025-06-03 12:35:06,229 | INFO     | traces error code: 0
[2025-06-03 14:48:15] 2025-06-03 12:35:06,229 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:48:15] 2025-06-03 12:35:06,583 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:48:15] 2025-06-03 12:35:06,666 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:48:15] 2025-06-03 12:35:06,712 [wrapper] pilotpid: 3052
[2025-06-03 14:48:15] 2025-06-03 12:35:06,785 [wrapper] Pilot exit status: 0
[2025-06-03 14:48:15] 2025-06-03 12:35:07,164 [wrapper] pandaids: 6677418576
[2025-06-03 14:48:15] 2025-06-03 12:35:08,050 [wrapper] cleanup supervisor_pilot  4480 3053
[2025-06-03 14:48:15] 2025-06-03 12:35:08,096 [wrapper] Test setup, not cleaning
[2025-06-03 14:48:15] 2025-06-03 12:35:08,182 [wrapper] apfmon messages muted
[2025-06-03 14:48:15] 2025-06-03 12:35:08,231 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:48:15] 2025-06-03 12:35:08,308 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:48:15]  *** Error codes and diagnostics ***
[2025-06-03 14:48:15]     "exeErrorCode": 0,
[2025-06-03 14:48:15]     "exeErrorDiag": "",
[2025-06-03 14:48:15]     "pilotErrorCode": 0,
[2025-06-03 14:48:15]     "pilotErrorDiag": "",
[2025-06-03 14:48:15]  *** Listing of results directory ***
[2025-06-03 14:48:15] total 394844
[2025-06-03 14:48:15] -rw-r--r--. 1 boinc boinc    495897 Jun  3 00:22 pilot3.tar.gz
[2025-06-03 14:48:15] -rwx------. 1 boinc boinc     37140 Jun  3 00:35 runpilot2-wrapper.sh
[2025-06-03 14:48:15] -rw-r--r--. 1 boinc boinc      5111 Jun  3 00:35 queuedata.json
[2025-06-03 14:48:15] -rw-r--r--. 1 boinc boinc       100 Jun  3 10:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:48:15] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 10:41 run_atlas
[2025-06-03 14:48:15] -rw-r--r--. 1 boinc boinc       105 Jun  3 10:41 job.xml
[2025-06-03 14:48:15] -rw-r--r--. 2 boinc boinc 216417115 Jun  3 10:41 EVNT.45006593._000536.pool.root.1
[2025-06-03 14:48:15] -rw-r--r--. 2 boinc boinc     15093 Jun  3 10:41 start_atlas.sh
[2025-06-03 14:48:15] drwxrwx--x. 2 boinc boinc        68 Jun  3 10:41 shared
[2025-06-03 14:48:15] -rw-r--r--. 2 boinc boinc    508877 Jun  3 10:41 input.tar.gz
[2025-06-03 14:48:15] -rw-r--r--. 1 boinc boinc      6393 Jun  3 10:41 init_data.xml
[2025-06-03 14:48:15] -rw-r--r--. 1 boinc boinc         0 Jun  3 10:41 boinc_lockfile
[2025-06-03 14:48:15] -rw-r--r--. 1 boinc boinc      2525 Jun  3 10:45 pandaJob.out
[2025-06-03 14:48:15] -rw-------. 1 boinc boinc    985498 Jun  3 10:48 agis_schedconf.cvmfs.json
[2025-06-03 14:48:15] drwx------. 4 boinc boinc      4096 Jun  3 10:48 pilot3
[2025-06-03 14:48:15] -rw-------. 1 boinc boinc 180989534 Jun  3 14:31 HITS.45006595._013386.pool.root.1
[2025-06-03 14:48:15] -rw-r--r--. 1 boinc boinc       531 Jun  3 14:32 boinc_task_state.xml
[2025-06-03 14:48:15] -rw-------. 1 boinc boinc      1017 Jun  3 14:33 memory_monitor_summary.json
[2025-06-03 14:48:15] -rw-------. 1 boinc boinc   1603667 Jun  3 14:33 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:48:15] -rw-------. 1 boinc boinc    374681 Jun  3 14:33 log.45006595._013386.job.log.tgz.1
[2025-06-03 14:48:15] -rw-------. 1 boinc boinc        95 Jun  3 14:34 pilot_heartbeat.json
[2025-06-03 14:48:15] -rw-------. 1 boinc boinc      7691 Jun  3 14:34 heartbeat.json
[2025-06-03 14:48:15] -rw-------. 1 boinc boinc      4603 Jun  3 14:35 pilotlog.txt
[2025-06-03 14:48:15] -rw-------. 1 boinc boinc   1168713 Jun  3 14:35 log.45006595._013386.job.log.1
[2025-06-03 14:48:15] -rw-------. 1 boinc boinc       357 Jun  3 14:35 output.list
[2025-06-03 14:48:15] -rw-r--r--. 1 boinc boinc       620 Jun  3 14:35 runtime_log
[2025-06-03 14:48:15] -rw-------. 1 boinc boinc   1566720 Jun  3 14:35 result.tar.gz
[2025-06-03 14:48:15] -rw-r--r--. 1 boinc boinc      8673 Jun  3 14:35 runtime_log.err
[2025-06-03 14:48:15] -rw-------. 1 boinc boinc       656 Jun  3 14:35 LnbMDmBwSg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6xgKDmxyzFzm.diag
[2025-06-03 14:48:15] -rw-r--r--. 1 boinc boinc      8192 Jun  3 14:48 boinc_mmap_file
[2025-06-03 14:48:15] -rw-r--r--. 1 boinc boinc        28 Jun  3 14:48 wrapper_checkpoint.txt
[2025-06-03 14:48:15] -rw-r--r--. 1 boinc boinc     20533 Jun  3 14:48 stderr.txt
[2025-06-03 14:48:15] HITS file was successfully produced:
[2025-06-03 14:48:15] -rw-------. 1 boinc boinc 180989534 Jun  3 14:31 shared/HITS.pool.root.1
[2025-06-03 14:48:15]  *** Contents of shared directory: ***
[2025-06-03 14:48:15] total 390144
[2025-06-03 14:48:15] -rw-r--r--. 2 boinc boinc 216417115 Jun  3 10:41 ATLAS.root_0
[2025-06-03 14:48:15] -rw-r--r--. 2 boinc boinc     15093 Jun  3 10:41 start_atlas.sh
[2025-06-03 14:48:15] -rw-r--r--. 2 boinc boinc    508877 Jun  3 10:41 input.tar.gz
[2025-06-03 14:48:15] -rw-------. 1 boinc boinc 180989534 Jun  3 14:31 HITS.pool.root.1
[2025-06-03 14:48:15] -rw-------. 1 boinc boinc   1566720 Jun  3 14:35 result.tar.gz
14:48:17 (24298): run_atlas exited; CPU time 47945.081946
14:48:17 (24298): called boinc_finish(0)

</stderr_txt>
]]>

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