Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:40:46 (32556): wrapper (7.7.26015): starting
10:40:46 (32556): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 10:40:46] Arguments: --nthreads 8
[2025-06-03 10:40:46] Threads: 8
[2025-06-03 10:40:46] Checking for CVMFS
[2025-06-03 10:40:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:40:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:40:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:40:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:40:48] 2.11.2.0 13101 31555 92672 146735 3 14 24412241 25165824 4635 130560 0 16541324 99.795 18352867 2115 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 10:40:48] CVMFS is ok
[2025-06-03 10:40:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:40:48] Checking for apptainer binary...
[2025-06-03 10:40:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:40:48] Running /usr/bin/apptainer --version
[2025-06-03 10:40:48] apptainer version 1.3.2-1.el7
[2025-06-03 10:40:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:11:33] cg-vwn269.simple-grid.lan
[2025-06-03 11:11:33] apptainer works
[2025-06-03 11:11:33] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:11:33] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:11:33] Starting ATLAS job with PandaID=6677379739
[2025-06-03 11:11:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 16:42:56]  *** The last 200 lines of the pilot log: ***
[2025-06-03 16:42:56] 2025-06-03 13:11:41,110 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:42:56] 2025-06-03 13:11:41,111 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:42:56] 2025-06-03 13:11:41,111 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:42:56] 2025-06-03 13:11:41,116 | INFO     | fitting pss+swap vs Time
[2025-06-03 16:42:56] 2025-06-03 13:11:41,116 | INFO     | sum of square deviations: 3438620752.0
[2025-06-03 16:42:56] 2025-06-03 13:11:41,118 | INFO     | sum of deviations: 96252533912.0
[2025-06-03 16:42:56] 2025-06-03 13:11:41,119 | INFO     | mean x: 1748949367.0
[2025-06-03 16:42:56] 2025-06-03 13:11:41,119 | INFO     | mean y: 2411445.739910314
[2025-06-03 16:42:56] 2025-06-03 13:11:41,119 | INFO     | -- intersect: -48953498611.98501
[2025-06-03 16:42:56] 2025-06-03 13:11:41,119 | INFO     | intersect: -48953498611.98501
[2025-06-03 16:42:56] 2025-06-03 13:11:41,120 | INFO     | chi2: 7.13872052866281
[2025-06-03 16:42:56] 2025-06-03 13:11:41,120 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 16:42:56] 2025-06-03 13:11:41,122 | INFO     | sum of deviations: 108638144041.00002
[2025-06-03 16:42:56] 2025-06-03 13:11:41,122 | INFO     | mean x: 1748949214.5
[2025-06-03 16:42:56] 2025-06-03 13:11:41,122 | INFO     | mean y: 2419617.091743119
[2025-06-03 16:42:56] 2025-06-03 13:11:41,123 | INFO     | -- intersect: -59142952706.3255
[2025-06-03 16:42:56] 2025-06-03 13:11:41,123 | INFO     | intersect: -59142952706.3255
[2025-06-03 16:42:56] 2025-06-03 13:11:41,123 | INFO     | chi2: 6.426884053662533
[2025-06-03 16:42:56] 2025-06-03 13:11:41,123 | INFO     | current chi2=6.426884053662533 (change=9.971485396327934 %)
[2025-06-03 16:42:56] 2025-06-03 13:11:41,123 | INFO     | right removable region: 217
[2025-06-03 16:42:56] 2025-06-03 13:11:41,124 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 16:42:56] 2025-06-03 13:11:41,126 | INFO     | sum of deviations: 20008281667.499973
[2025-06-03 16:42:56] 2025-06-03 13:11:41,126 | INFO     | mean x: 1748949519.5
[2025-06-03 16:42:56] 2025-06-03 13:11:41,126 | INFO     | mean y: 2462813.9587155962
[2025-06-03 16:42:56] 2025-06-03 13:11:41,126 | INFO     | -- intersect: -10890557180.03741
[2025-06-03 16:42:56] 2025-06-03 13:11:41,126 | INFO     | intersect: -10890557180.03741
[2025-06-03 16:42:56] 2025-06-03 13:11:41,127 | INFO     | chi2: 2.299175737868893
[2025-06-03 16:42:56] 2025-06-03 13:11:41,127 | INFO     | current chi2=2.299175737868893 (change=67.79288769412628 %)
[2025-06-03 16:42:56] 2025-06-03 13:11:41,127 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 16:42:56] 2025-06-03 13:11:41,129 | INFO     | sum of deviations: -18304953871.0
[2025-06-03 16:42:56] 2025-06-03 13:11:41,129 | INFO     | mean x: 1748949672.0
[2025-06-03 16:42:56] 2025-06-03 13:11:41,129 | INFO     | mean y: 2489687.136150235
[2025-06-03 16:42:56] 2025-06-03 13:11:41,129 | INFO     | -- intersect: 10686598179.500006
[2025-06-03 16:42:56] 2025-06-03 13:11:41,130 | INFO     | intersect: 10686598179.500006
[2025-06-03 16:42:56] 2025-06-03 13:11:41,130 | INFO     | chi2: 0.8695551298462282
[2025-06-03 16:42:56] 2025-06-03 13:11:41,130 | INFO     | current chi2=0.8695551298462282 (change=62.179701380625254 %)
[2025-06-03 16:42:56] 2025-06-03 13:11:41,131 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 16:42:56] 2025-06-03 13:11:41,132 | INFO     | sum of deviations: -18527551441.5
[2025-06-03 16:42:56] 2025-06-03 13:11:41,132 | INFO     | mean x: 1748949824.5
[2025-06-03 16:42:56] 2025-06-03 13:11:41,133 | INFO     | mean y: 2489799.4951923075
[2025-06-03 16:42:56] 2025-06-03 13:11:41,133 | INFO     | -- intersect: 11615290894.24624
[2025-06-03 16:42:56] 2025-06-03 13:11:41,133 | INFO     | intersect: 11615290894.24624
[2025-06-03 16:42:56] 2025-06-03 13:11:41,133 | INFO     | chi2: 0.8464075310857597
[2025-06-03 16:42:56] 2025-06-03 13:11:41,133 | INFO     | current chi2=0.8464075310857597 (change=2.662004738510584 %)
[2025-06-03 16:42:56] 2025-06-03 13:11:41,133 | INFO     | left removable region: 30
[2025-06-03 16:42:56] 2025-06-03 13:11:41,134 | INFO     | sum of square deviations: 2027639878.0
[2025-06-03 16:42:56] 2025-06-03 13:11:41,135 | INFO     | sum of deviations: 2186603133.0000005
[2025-06-03 16:42:56] 2025-06-03 13:11:41,135 | INFO     | mean x: 1748950099.0
[2025-06-03 16:42:56] 2025-06-03 13:11:41,136 | INFO     | mean y: 2495114.6256684493
[2025-06-03 16:42:56] 2025-06-03 13:11:41,136 | INFO     | -- intersect: -1883569470.8204365
[2025-06-03 16:42:56] 2025-06-03 13:11:41,136 | INFO     | intersect: -1883569470.8204365
[2025-06-03 16:42:56] 2025-06-03 13:11:41,136 | INFO     | chi2: 0.0007879119246994773
[2025-06-03 16:42:56] 2025-06-03 13:11:41,136 | INFO     | -- intersect: -1883569470.8204365
[2025-06-03 16:42:56] 2025-06-03 13:11:41,137 | INFO     | current memory leak: 1.08 B/s (using 187 data points, chi2=0.00)
[2025-06-03 16:42:56] 2025-06-03 13:11:41,137 | INFO     | ..............................
[2025-06-03 16:42:56] 2025-06-03 13:11:41,138 | INFO     | . Timing measurements:
[2025-06-03 16:42:56] 2025-06-03 13:11:41,138 | INFO     | . get job = 0 s
[2025-06-03 16:42:56] 2025-06-03 13:11:41,138 | INFO     | . initial setup = 9 s
[2025-06-03 16:42:56] 2025-06-03 13:11:41,138 | INFO     | . payload setup = 153 s
[2025-06-03 16:42:56] 2025-06-03 13:11:41,138 | INFO     | . stage-in = 0 s
[2025-06-03 16:42:56] 2025-06-03 13:11:41,138 | INFO     | . payload execution = 13750 s
[2025-06-03 16:42:56] 2025-06-03 13:11:41,138 | INFO     | . stage-out = 6 s
[2025-06-03 16:42:56] 2025-06-03 13:11:41,138 | INFO     | . log creation = 1 s
[2025-06-03 16:42:56] 2025-06-03 13:11:41,139 | INFO     | ..............................
[2025-06-03 16:42:56] 2025-06-03 13:11:41,746 | INFO     | 
[2025-06-03 16:42:56] 2025-06-03 13:11:41,747 | INFO     | job summary report
[2025-06-03 16:42:56] 2025-06-03 13:11:41,747 | INFO     | --------------------------------------------------
[2025-06-03 16:42:56] 2025-06-03 13:11:41,747 | INFO     | PanDA job id: 6677379739
[2025-06-03 16:42:56] 2025-06-03 13:11:41,747 | INFO     | task id: 45006595
[2025-06-03 16:42:56] 2025-06-03 13:11:41,747 | INFO     | errors: (none)
[2025-06-03 16:42:56] 2025-06-03 13:11:41,747 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 16:42:56] 2025-06-03 13:11:41,747 | INFO     | pilot state: finished 
[2025-06-03 16:42:56] 2025-06-03 13:11:41,747 | INFO     | transexitcode: 0
[2025-06-03 16:42:56] 2025-06-03 13:11:41,748 | INFO     | exeerrorcode: 0
[2025-06-03 16:42:56] 2025-06-03 13:11:41,748 | INFO     | exeerrordiag: 
[2025-06-03 16:42:56] 2025-06-03 13:11:41,748 | INFO     | exitcode: 0
[2025-06-03 16:42:56] 2025-06-03 13:11:41,748 | INFO     | exitmsg: OK
[2025-06-03 16:42:56] 2025-06-03 13:11:41,748 | INFO     | cpuconsumptiontime: 49810 s
[2025-06-03 16:42:56] 2025-06-03 13:11:41,748 | INFO     | nevents: 400
[2025-06-03 16:42:56] 2025-06-03 13:11:41,748 | INFO     | neventsw: 0
[2025-06-03 16:42:56] 2025-06-03 13:11:41,748 | INFO     | pid: 704
[2025-06-03 16:42:56] 2025-06-03 13:11:41,748 | INFO     | pgrp: 704
[2025-06-03 16:42:56] 2025-06-03 13:11:41,748 | INFO     | corecount: 8
[2025-06-03 16:42:56] 2025-06-03 13:11:41,748 | INFO     | event service: False
[2025-06-03 16:42:56] 2025-06-03 13:11:41,748 | INFO     | sizes: {0: 2405006, 1: 2405205, 12: 2405205, 23: 2405233, 34: 2405261, 44: 2405289, 55: 2405445, 66: 2405473, 77: 2405501, 88: 2405557, 90: 2405791, 98: 2406099, 1
[2025-06-03 16:42:56] 2025-06-03 13:11:41,748 | INFO     | --------------------------------------------------
[2025-06-03 16:42:56] 2025-06-03 13:11:41,749 | INFO     | 
[2025-06-03 16:42:56] 2025-06-03 13:11:41,749 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-03 16:42:56] 2025-06-03 13:11:41,997 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,997 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,997 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,997 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,998 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,998 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,998 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,999 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,999 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,999 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 16:42:56] 2025-06-03 13:11:41,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,999 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 16:42:56] 2025-06-03 13:11:41,999 | INFO     | job 6677379739 has completed (purged errors)
[2025-06-03 16:42:56] 2025-06-03 13:11:41,999 | INFO     | overall cleanup function is called
[2025-06-03 16:42:56] 2025-06-03 13:11:43,008 | INFO     | --- collectZombieJob: --- 10, [704]
[2025-06-03 16:42:56] 2025-06-03 13:11:43,009 | INFO     | zombie collector waiting for pid 704
[2025-06-03 16:42:56] 2025-06-03 13:11:43,009 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 16:42:56] 2025-06-03 13:11:43,009 | INFO     | collected zombie processes
[2025-06-03 16:42:56] 2025-06-03 13:11:43,009 | INFO     | will attempt to kill all subprocesses of pid=704
[2025-06-03 16:42:56] 2025-06-03 13:11:43,126 | INFO     | process IDs to be killed: [704] (in reverse order)
[2025-06-03 16:42:56] 2025-06-03 13:11:44,199 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 16:42:56] 2025-06-03 13:11:44,199 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 16:42:56] 2025-06-03 13:11:44,203 | INFO     | did not find any defunct processes belonging to 704
[2025-06-03 16:42:56] 2025-06-03 13:11:44,206 | INFO     | did not find any defunct processes belonging to 704
[2025-06-03 16:42:56] 2025-06-03 13:11:44,207 | INFO     | ready for new job
[2025-06-03 16:42:56] 2025-06-03 13:11:44,207 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 16:42:56] 2025-06-03 13:11:44,209 | INFO     | **************************************
[2025-06-03 16:42:56] 2025-06-03 13:11:44,209 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 16:42:56] 2025-06-03 13:11:44,209 | INFO     | **************************************
[2025-06-03 16:42:56] 2025-06-03 13:11:44,209 | INFO     | 
[2025-06-03 16:42:56] 2025-06-03 13:11:44,210 | INFO     | pilot is running in a VM
[2025-06-03 16:42:56] 2025-06-03 13:11:44,210 | INFO     | architecture information:
[2025-06-03 16:42:56] 2025-06-03 13:11:44,212 | INFO     | executing command: cat /etc/os-release
[2025-06-03 16:42:56] 2025-06-03 13:11:44,319 | INFO     | cat /etc/os-release:
[2025-06-03 16:42:56] NAME="CentOS Linux"
[2025-06-03 16:42:56] VERSION="7 (Core)"
[2025-06-03 16:42:56] ID="centos"
[2025-06-03 16:42:56] ID_LIKE="rhel fedora"
[2025-06-03 16:42:56] VERSION_ID="7"
[2025-06-03 16:42:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 16:42:56] ANSI_COLOR="0;31"
[2025-06-03 16:42:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 16:42:56] HOME_URL="https://www.centos.org/"
[2025-06-03 16:42:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 16:42:56] 
[2025-06-03 16:42:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 16:42:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 16:42:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 16:42:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 16:42:56] 
[2025-06-03 16:42:56] 2025-06-03 13:11:44,319 | INFO     | **************************************
[2025-06-03 16:42:56] 2025-06-03 13:11:44,823 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-03 16:42:56] 2025-06-03 13:11:44,998 | INFO     | sufficient remaining disk space (496669556736 B)
[2025-06-03 16:42:56] 2025-06-03 13:11:44,999 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 16:42:56] 2025-06-03 13:11:44,999 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 16:42:56] 2025-06-03 13:11:44,999 | INFO     | update_server=False
[2025-06-03 16:42:56] 2025-06-03 13:11:44,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 16:42:56] 2025-06-03 13:11:45,000 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 16:42:56] 2025-06-03 13:11:45,001 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 16:42:56] 2025-06-03 13:11:45,001 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 16:42:56] 2025-06-03 13:11:45,001 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 16:42:56] 2025-06-03 13:11:45,007 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 16:42:56] 2025-06-03 13:11:45,139 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 16:42:56] 2025-06-03 13:11:45,447 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 16:42:56] 2025-06-03 13:11:45,448 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 16:42:56] 2025-06-03 13:11:45,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:42:56] 2025-06-03 13:11:45,448 | INFO     | will abort loop
[2025-06-03 16:42:56] 2025-06-03 13:11:45,784 | INFO     | all data control threads have been joined
[2025-06-03 16:42:56] 2025-06-03 13:11:45,973 | INFO     | all payload control threads have been joined
[2025-06-03 16:42:56] 2025-06-03 13:11:46,006 | INFO     | [job] retrieve thread has finished
[2025-06-03 16:42:56] 2025-06-03 13:11:46,110 | INFO     | all job control threads have been joined
[2025-06-03 16:42:56] 2025-06-03 13:11:46,167 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 16:42:56] 2025-06-03 13:11:46,282 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:42:56] 2025-06-03 13:11:46,360 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 16:42:56] 2025-06-03 13:11:46,454 | INFO     | [job] job monitor thread has finished
[2025-06-03 16:42:56] 2025-06-03 13:11:46,481 | INFO     | [data] copytool_in thread has finished
[2025-06-03 16:42:56] 2025-06-03 13:11:46,595 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 16:42:56] 2025-06-03 13:11:46,791 | INFO     | [data] control thread has finished
[2025-06-03 16:42:56] 2025-06-03 13:11:46,822 | INFO     | [job] validate thread has finished
[2025-06-03 16:42:56] 2025-06-03 13:11:46,866 | INFO     | [payload] failed_post thread has finished
[2025-06-03 16:42:56] 2025-06-03 13:11:46,918 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 16:42:56] 2025-06-03 13:11:46,980 | INFO     | [payload] control thread has finished
[2025-06-03 16:42:56] 2025-06-03 13:11:47,015 | INFO     | [data] copytool_out thread has finished
[2025-06-03 16:42:56] 2025-06-03 13:11:47,117 | INFO     | [job] control thread has finished
[2025-06-03 16:42:56] 2025-06-03 13:11:47,289 | INFO     | [job] queue monitor thread has finished
[2025-06-03 16:42:56] 2025-06-03 13:11:47,390 | INFO     | [payload] validate_post thread has finished
[2025-06-03 16:42:56] 2025-06-03 13:11:49,148 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 16:42:56] 2025-06-03 13:11:50,645 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140393585665856)>', '<ExcThread(monitor, started 140393010161408)>']
[2025-06-03 16:42:56] 2025-06-03 13:11:51,035 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 16:42:56] 2025-06-03 13:11:51,036 | INFO     | [monitor] control thread has ended
[2025-06-03 16:42:56] 2025-06-03 13:11:55,670 | INFO     | all workflow threads have been joined
[2025-06-03 16:42:56] 2025-06-03 13:11:55,671 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 16:42:56] 2025-06-03 13:11:55,671 | INFO     | traces error code: 0
[2025-06-03 16:42:56] 2025-06-03 13:11:55,671 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 16:42:56] 2025-06-03 13:11:55,897 [wrapper] ==== pilot stdout END ====
[2025-06-03 16:42:56] 2025-06-03 13:11:55,923 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 16:42:56] 2025-06-03 13:11:55,937 [wrapper] pilotpid: 22541
[2025-06-03 16:42:56] 2025-06-03 13:11:55,997 [wrapper] Pilot exit status: 0
[2025-06-03 16:42:56] 2025-06-03 13:11:56,628 [wrapper] pandaids: 6677379739
[2025-06-03 16:42:56] 2025-06-03 13:11:57,390 [wrapper] cleanup supervisor_pilot  9595 22542
[2025-06-03 16:42:56] 2025-06-03 13:11:57,458 [wrapper] Test setup, not cleaning
[2025-06-03 16:42:56] 2025-06-03 13:11:57,544 [wrapper] apfmon messages muted
[2025-06-03 16:42:56] 2025-06-03 13:11:57,647 [wrapper] ==== wrapper stdout END ====
[2025-06-03 16:42:56] 2025-06-03 13:11:57,731 [wrapper] ==== wrapper stderr END ====
[2025-06-03 16:42:56]  *** Error codes and diagnostics ***
[2025-06-03 16:42:56]     "exeErrorCode": 0,
[2025-06-03 16:42:56]     "exeErrorDiag": "",
[2025-06-03 16:42:56]     "pilotErrorCode": 0,
[2025-06-03 16:42:56]     "pilotErrorDiag": "",
[2025-06-03 16:42:56]  *** Listing of results directory ***
[2025-06-03 16:42:56] total 399688
[2025-06-03 16:42:56] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 16:42:56] -rwx------. 1 boinc boinc     37140 Jun  2 17:50 runpilot2-wrapper.sh
[2025-06-03 16:42:56] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:52 queuedata.json
[2025-06-03 16:42:56] -rw-r--r--. 1 boinc boinc       100 Jun  3 10:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 16:42:56] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 10:40 run_atlas
[2025-06-03 16:42:56] -rw-r--r--. 1 boinc boinc       105 Jun  3 10:40 job.xml
[2025-06-03 16:42:56] -rw-r--r--. 1 boinc boinc      6392 Jun  3 10:40 init_data.xml
[2025-06-03 16:42:56] -rw-r--r--. 2 boinc boinc 219959069 Jun  3 10:40 EVNT.45006593._000072.pool.root.1
[2025-06-03 16:42:56] -rw-r--r--. 2 boinc boinc     15093 Jun  3 10:40 start_atlas.sh
[2025-06-03 16:42:56] drwxrwx--x. 2 boinc boinc        68 Jun  3 10:40 shared
[2025-06-03 16:42:56] -rw-r--r--. 2 boinc boinc    508871 Jun  3 10:40 input.tar.gz
[2025-06-03 16:42:56] -rw-r--r--. 1 boinc boinc         0 Jun  3 10:40 boinc_lockfile
[2025-06-03 16:42:56] -rw-r--r--. 1 boinc boinc      2521 Jun  3 11:11 pandaJob.out
[2025-06-03 16:42:56] -rw-------. 1 boinc boinc    985498 Jun  3 11:14 agis_schedconf.cvmfs.json
[2025-06-03 16:42:56] drwx------. 4 boinc boinc      4096 Jun  3 11:14 pilot3
[2025-06-03 16:42:56] -rw-------. 1 boinc boinc 182276429 Jun  3 15:08 HITS.45006595._001797.pool.root.1
[2025-06-03 16:42:56] -rw-r--r--. 1 boinc boinc       531 Jun  3 15:08 boinc_task_state.xml
[2025-06-03 16:42:56] -rw-------. 1 boinc boinc      1019 Jun  3 15:09 memory_monitor_summary.json
[2025-06-03 16:42:56] -rw-------. 1 boinc boinc   1603667 Jun  3 15:09 agis_ddmendpoints.agis.ALL.json
[2025-06-03 16:42:56] -rw-------. 1 boinc boinc    394268 Jun  3 15:10 log.45006595._001797.job.log.tgz.1
[2025-06-03 16:42:56] -rw-------. 1 boinc boinc      7686 Jun  3 15:11 heartbeat.json
[2025-06-03 16:42:56] -rw-------. 1 boinc boinc        95 Jun  3 15:11 pilot_heartbeat.json
[2025-06-03 16:42:56] -rw-------. 1 boinc boinc      4726 Jun  3 15:11 pilotlog.txt
[2025-06-03 16:42:56] -rw-------. 1 boinc boinc   1218046 Jun  3 15:11 log.45006595._001797.job.log.1
[2025-06-03 16:42:56] -rw-------. 1 boinc boinc       357 Jun  3 15:11 output.list
[2025-06-03 16:42:56] -rw-r--r--. 1 boinc boinc       620 Jun  3 15:11 runtime_log
[2025-06-03 16:42:56] -rw-------. 1 boinc boinc   1628160 Jun  3 15:11 result.tar.gz
[2025-06-03 16:42:56] -rw-r--r--. 1 boinc boinc      8673 Jun  3 15:11 runtime_log.err
[2025-06-03 16:42:56] -rw-------. 1 boinc boinc       656 Jun  3 15:11 FfBODmBcMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXdVKDmZEvQWm.diag
[2025-06-03 16:42:56] -rw-r--r--. 1 boinc boinc      8192 Jun  3 16:42 boinc_mmap_file
[2025-06-03 16:42:56] -rw-r--r--. 1 boinc boinc        28 Jun  3 16:42 wrapper_checkpoint.txt
[2025-06-03 16:42:56] -rw-r--r--. 1 boinc boinc     20518 Jun  3 16:42 stderr.txt
[2025-06-03 16:42:56] HITS file was successfully produced:
[2025-06-03 16:42:56] -rw-------. 1 boinc boinc 182276429 Jun  3 15:08 shared/HITS.pool.root.1
[2025-06-03 16:42:56]  *** Contents of shared directory: ***
[2025-06-03 16:42:56] total 394920
[2025-06-03 16:42:56] -rw-r--r--. 2 boinc boinc 219959069 Jun  3 10:40 ATLAS.root_0
[2025-06-03 16:42:56] -rw-r--r--. 2 boinc boinc     15093 Jun  3 10:40 start_atlas.sh
[2025-06-03 16:42:56] -rw-r--r--. 2 boinc boinc    508871 Jun  3 10:40 input.tar.gz
[2025-06-03 16:42:56] -rw-------. 1 boinc boinc 182276429 Jun  3 15:08 HITS.pool.root.1
[2025-06-03 16:42:56] -rw-------. 1 boinc boinc   1628160 Jun  3 15:11 result.tar.gz
16:42:58 (32556): run_atlas exited; CPU time 49995.552074
16:42:58 (32556): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN