Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:52:26 (21845): wrapper (7.7.26015): starting
09:52:26 (21845): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 09:52:26] Arguments: --nthreads 8
[2025-06-03 09:52:26] Threads: 8
[2025-06-03 09:52:26] Checking for CVMFS
[2025-06-03 09:52:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:52:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:52:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:52:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:52:28] 2.11.2.0 17879 31514 90680 146734 1 114 14513568 25165824 4353 130560 0 16713495 99.856 16868646 2005 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 09:52:28] CVMFS is ok
[2025-06-03 09:52:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:52:28] Checking for apptainer binary...
[2025-06-03 09:52:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:52:28] Running /usr/bin/apptainer --version
[2025-06-03 09:52:28] apptainer version 1.3.2-1.el7
[2025-06-03 09:52:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:52:29] cg-vwn476.simple-grid.lan
[2025-06-03 09:52:29] apptainer works
[2025-06-03 09:52:29] Set ATHENA_PROC_NUMBER=8
[2025-06-03 09:52:29] Set ATHENA_CORE_NUMBER=8
[2025-06-03 09:52:29] Starting ATLAS job with PandaID=6677393887
[2025-06-03 09:52:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:45:22]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:45:22] 2025-06-03 11:12:06,865 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:45:22] 2025-06-03 11:12:06,866 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:45:22] 2025-06-03 11:12:06,866 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:45:22] 2025-06-03 11:12:06,870 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:45:22] 2025-06-03 11:12:06,870 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 14:45:22] 2025-06-03 11:12:06,872 | INFO     | sum of deviations: -10404767620.999996
[2025-06-03 14:45:22] 2025-06-03 11:12:06,872 | INFO     | mean x: 1748943123.0
[2025-06-03 14:45:22] 2025-06-03 11:12:06,872 | INFO     | mean y: 2490771.585492228
[2025-06-03 14:45:22] 2025-06-03 11:12:06,872 | INFO     | -- intersect: 8165858865.092741
[2025-06-03 14:45:22] 2025-06-03 11:12:06,872 | INFO     | intersect: 8165858865.092741
[2025-06-03 14:45:22] 2025-06-03 11:12:06,873 | INFO     | chi2: 2.8221599683740646
[2025-06-03 14:45:22] 2025-06-03 11:12:06,873 | INFO     | sum of square deviations: 2060343747.0
[2025-06-03 14:45:22] 2025-06-03 11:12:06,874 | INFO     | sum of deviations: 2628592907.000004
[2025-06-03 14:45:22] 2025-06-03 11:12:06,874 | INFO     | mean x: 1748942970.5
[2025-06-03 14:45:22] 2025-06-03 11:12:06,874 | INFO     | mean y: 2502304.8936170214
[2025-06-03 14:45:22] 2025-06-03 11:12:06,874 | INFO     | -- intersect: -2228804531.0155544
[2025-06-03 14:45:22] 2025-06-03 11:12:06,875 | INFO     | intersect: -2228804531.0155544
[2025-06-03 14:45:22] 2025-06-03 11:12:06,875 | INFO     | chi2: 2.060545970839845
[2025-06-03 14:45:22] 2025-06-03 11:12:06,875 | INFO     | current chi2=2.060545970839845 (change=26.986918036861308 %)
[2025-06-03 14:45:22] 2025-06-03 11:12:06,875 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 14:45:22] 2025-06-03 11:12:06,876 | INFO     | sum of deviations: 2708497661.0000005
[2025-06-03 14:45:22] 2025-06-03 11:12:06,877 | INFO     | mean x: 1748942818.0
[2025-06-03 14:45:22] 2025-06-03 11:12:06,877 | INFO     | mean y: 2502381.043715847
[2025-06-03 14:45:22] 2025-06-03 11:12:06,877 | INFO     | -- intersect: -2490285648.7967215
[2025-06-03 14:45:22] 2025-06-03 11:12:06,877 | INFO     | intersect: -2490285648.7967215
[2025-06-03 14:45:22] 2025-06-03 11:12:06,877 | INFO     | chi2: 2.0613088816350085
[2025-06-03 14:45:22] 2025-06-03 11:12:06,877 | INFO     | current chi2=2.0613088816350085 (change=-0.03702469180305221 %)
[2025-06-03 14:45:22] 2025-06-03 11:12:06,877 | INFO     | right removable region: 182
[2025-06-03 14:45:22] 2025-06-03 11:12:06,878 | INFO     | sum of square deviations: 2060343747.0
[2025-06-03 14:45:22] 2025-06-03 11:12:06,879 | INFO     | sum of deviations: -46922775660.49999
[2025-06-03 14:45:22] 2025-06-03 11:12:06,879 | INFO     | mean x: 1748943275.5
[2025-06-03 14:45:22] 2025-06-03 11:12:06,879 | INFO     | mean y: 2523470.526595745
[2025-06-03 14:45:22] 2025-06-03 11:12:06,879 | INFO     | -- intersect: 39833388139.93874
[2025-06-03 14:45:22] 2025-06-03 11:12:06,879 | INFO     | intersect: 39833388139.93874
[2025-06-03 14:45:22] 2025-06-03 11:12:06,880 | INFO     | chi2: 0.9845462927531347
[2025-06-03 14:45:22] 2025-06-03 11:12:06,880 | INFO     | current chi2=0.9845462927531347 (change=65.11373190087582 %)
[2025-06-03 14:45:22] 2025-06-03 11:12:06,880 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 14:45:22] 2025-06-03 11:12:06,881 | INFO     | sum of deviations: -45143434727.0
[2025-06-03 14:45:22] 2025-06-03 11:12:06,881 | INFO     | mean x: 1748943428.0
[2025-06-03 14:45:22] 2025-06-03 11:12:06,882 | INFO     | mean y: 2521722.781420765
[2025-06-03 14:45:22] 2025-06-03 11:12:06,882 | INFO     | -- intersect: 41550666505.489
[2025-06-03 14:45:22] 2025-06-03 11:12:06,882 | INFO     | intersect: 41550666505.489
[2025-06-03 14:45:22] 2025-06-03 11:12:06,882 | INFO     | chi2: 0.9688760154785432
[2025-06-03 14:45:22] 2025-06-03 11:12:06,882 | INFO     | current chi2=0.9688760154785432 (change=1.5916242222366115 %)
[2025-06-03 14:45:22] 2025-06-03 11:12:06,882 | INFO     | left removable region: 20
[2025-06-03 14:45:22] 2025-06-03 11:12:06,883 | INFO     | sum of square deviations: 1318277740.5
[2025-06-03 14:45:22] 2025-06-03 11:12:06,884 | INFO     | sum of deviations: -20156149724.000027
[2025-06-03 14:45:22] 2025-06-03 11:12:06,884 | INFO     | mean x: 1748943397.5
[2025-06-03 14:45:22] 2025-06-03 11:12:06,884 | INFO     | mean y: 2523509.4320987654
[2025-06-03 14:45:22] 2025-06-03 11:12:06,884 | INFO     | -- intersect: 26743447592.274334
[2025-06-03 14:45:22] 2025-06-03 11:12:06,884 | INFO     | intersect: 26743447592.274334
[2025-06-03 14:45:22] 2025-06-03 11:12:06,884 | INFO     | chi2: 0.1493867125126652
[2025-06-03 14:45:22] 2025-06-03 11:12:06,884 | INFO     | -- intersect: 26743447592.274334
[2025-06-03 14:45:22] 2025-06-03 11:12:06,885 | INFO     | current memory leak: -15.29 B/s (using 162 data points, chi2=0.15)
[2025-06-03 14:45:22] 2025-06-03 11:12:06,885 | INFO     | ..............................
[2025-06-03 14:45:22] 2025-06-03 11:12:06,885 | INFO     | . Timing measurements:
[2025-06-03 14:45:22] 2025-06-03 11:12:06,885 | INFO     | . get job = 0 s
[2025-06-03 14:45:22] 2025-06-03 11:12:06,886 | INFO     | . initial setup = 3 s
[2025-06-03 14:45:22] 2025-06-03 11:12:06,886 | INFO     | . payload setup = 25 s
[2025-06-03 14:45:22] 2025-06-03 11:12:06,886 | INFO     | . stage-in = 0 s
[2025-06-03 14:45:22] 2025-06-03 11:12:06,886 | INFO     | . payload execution = 11788 s
[2025-06-03 14:45:22] 2025-06-03 11:12:06,886 | INFO     | . stage-out = 4 s
[2025-06-03 14:45:22] 2025-06-03 11:12:06,886 | INFO     | . log creation = 1 s
[2025-06-03 14:45:22] 2025-06-03 11:12:06,886 | INFO     | ..............................
[2025-06-03 14:45:22] 2025-06-03 11:12:07,005 | INFO     | 
[2025-06-03 14:45:22] 2025-06-03 11:12:07,005 | INFO     | job summary report
[2025-06-03 14:45:22] 2025-06-03 11:12:07,005 | INFO     | --------------------------------------------------
[2025-06-03 14:45:22] 2025-06-03 11:12:07,005 | INFO     | PanDA job id: 6677393887
[2025-06-03 14:45:22] 2025-06-03 11:12:07,005 | INFO     | task id: 45006595
[2025-06-03 14:45:22] 2025-06-03 11:12:07,005 | INFO     | errors: (none)
[2025-06-03 14:45:22] 2025-06-03 11:12:07,005 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:45:22] 2025-06-03 11:12:07,005 | INFO     | pilot state: finished 
[2025-06-03 14:45:22] 2025-06-03 11:12:07,005 | INFO     | transexitcode: 0
[2025-06-03 14:45:22] 2025-06-03 11:12:07,006 | INFO     | exeerrorcode: 0
[2025-06-03 14:45:22] 2025-06-03 11:12:07,006 | INFO     | exeerrordiag: 
[2025-06-03 14:45:22] 2025-06-03 11:12:07,006 | INFO     | exitcode: 0
[2025-06-03 14:45:22] 2025-06-03 11:12:07,006 | INFO     | exitmsg: OK
[2025-06-03 14:45:22] 2025-06-03 11:12:07,006 | INFO     | cpuconsumptiontime: 44754 s
[2025-06-03 14:45:22] 2025-06-03 11:12:07,006 | INFO     | nevents: 400
[2025-06-03 14:45:22] 2025-06-03 11:12:07,006 | INFO     | neventsw: 0
[2025-06-03 14:45:22] 2025-06-03 11:12:07,006 | INFO     | pid: 1804
[2025-06-03 14:45:22] 2025-06-03 11:12:07,006 | INFO     | pgrp: 1804
[2025-06-03 14:45:22] 2025-06-03 11:12:07,006 | INFO     | corecount: 8
[2025-06-03 14:45:22] 2025-06-03 11:12:07,006 | INFO     | event service: False
[2025-06-03 14:45:22] 2025-06-03 11:12:07,006 | INFO     | sizes: {0: 2405006, 1: 2405205, 12: 2405439, 23: 2405439, 11818: 2434247, 11819: 2434246, 11823: 2443371, 11824: 2443427, 11919: 2443597}
[2025-06-03 14:45:22] 2025-06-03 11:12:07,007 | INFO     | --------------------------------------------------
[2025-06-03 14:45:22] 2025-06-03 11:12:07,007 | INFO     | 
[2025-06-03 14:45:22] 2025-06-03 11:12:07,007 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-03 14:45:22] 2025-06-03 11:12:07,037 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,037 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,037 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,038 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,038 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,038 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,038 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,038 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,038 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,038 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,038 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,038 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,039 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,039 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,039 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,039 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,039 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,039 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:45:22] 2025-06-03 11:12:07,039 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,039 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:45:22] 2025-06-03 11:12:07,039 | INFO     | job 6677393887 has completed (purged errors)
[2025-06-03 14:45:22] 2025-06-03 11:12:07,040 | INFO     | overall cleanup function is called
[2025-06-03 14:45:22] 2025-06-03 11:12:08,048 | INFO     | --- collectZombieJob: --- 10, [1804]
[2025-06-03 14:45:22] 2025-06-03 11:12:08,048 | INFO     | zombie collector waiting for pid 1804
[2025-06-03 14:45:22] 2025-06-03 11:12:08,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:45:22] 2025-06-03 11:12:08,049 | INFO     | collected zombie processes
[2025-06-03 14:45:22] 2025-06-03 11:12:08,049 | INFO     | will attempt to kill all subprocesses of pid=1804
[2025-06-03 14:45:22] 2025-06-03 11:12:08,164 | INFO     | process IDs to be killed: [1804] (in reverse order)
[2025-06-03 14:45:22] 2025-06-03 11:12:08,622 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:45:22] 2025-06-03 11:12:08,622 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:45:22] 2025-06-03 11:12:08,625 | INFO     | did not find any defunct processes belonging to 1804
[2025-06-03 14:45:22] 2025-06-03 11:12:08,628 | INFO     | did not find any defunct processes belonging to 1804
[2025-06-03 14:45:22] 2025-06-03 11:12:08,628 | INFO     | ready for new job
[2025-06-03 14:45:22] 2025-06-03 11:12:08,628 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:45:22] 2025-06-03 11:12:08,630 | INFO     | **************************************
[2025-06-03 14:45:22] 2025-06-03 11:12:08,630 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:45:22] 2025-06-03 11:12:08,630 | INFO     | **************************************
[2025-06-03 14:45:22] 2025-06-03 11:12:08,630 | INFO     | 
[2025-06-03 14:45:22] 2025-06-03 11:12:08,631 | INFO     | pilot is running in a VM
[2025-06-03 14:45:22] 2025-06-03 11:12:08,631 | INFO     | architecture information:
[2025-06-03 14:45:22] 2025-06-03 11:12:08,647 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:45:22] 2025-06-03 11:12:08,925 | INFO     | cat /etc/os-release:
[2025-06-03 14:45:22] NAME="CentOS Linux"
[2025-06-03 14:45:22] VERSION="7 (Core)"
[2025-06-03 14:45:22] ID="centos"
[2025-06-03 14:45:22] ID_LIKE="rhel fedora"
[2025-06-03 14:45:22] VERSION_ID="7"
[2025-06-03 14:45:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:45:22] ANSI_COLOR="0;31"
[2025-06-03 14:45:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:45:22] HOME_URL="https://www.centos.org/"
[2025-06-03 14:45:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:45:22] 
[2025-06-03 14:45:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:45:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:45:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:45:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:45:22] 
[2025-06-03 14:45:22] 2025-06-03 11:12:08,925 | INFO     | **************************************
[2025-06-03 14:45:22] 2025-06-03 11:12:09,057 | INFO     | PID=25585 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 14:45:22] 2025-06-03 11:12:09,057 | INFO     | .. there are 9 such processes running
[2025-06-03 14:45:22] 2025-06-03 11:12:09,427 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-03 14:45:22] 2025-06-03 11:12:09,674 | INFO     | sufficient remaining disk space (496961060864 B)
[2025-06-03 14:45:22] 2025-06-03 11:12:09,674 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:45:22] 2025-06-03 11:12:09,674 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:45:22] 2025-06-03 11:12:09,675 | INFO     | update_server=False
[2025-06-03 14:45:22] 2025-06-03 11:12:09,675 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:45:22] 2025-06-03 11:12:09,675 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 14:45:22] 2025-06-03 11:12:09,675 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:45:22] 2025-06-03 11:12:09,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:45:22] 2025-06-03 11:12:09,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:45:22] 2025-06-03 11:12:09,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:45:22] 2025-06-03 11:12:10,017 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:45:22] 2025-06-03 11:12:10,017 | INFO     | aborting loop
[2025-06-03 14:45:22] 2025-06-03 11:12:10,052 | INFO     | all data control threads have been joined
[2025-06-03 14:45:22] 2025-06-03 11:12:10,425 | INFO     | all payload control threads have been joined
[2025-06-03 14:45:22] 2025-06-03 11:12:10,680 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:45:22] 2025-06-03 11:12:10,844 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:45:22] 2025-06-03 11:12:10,937 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:45:22] 2025-06-03 11:12:11,023 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:45:22] 2025-06-03 11:12:11,030 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:45:22] 2025-06-03 11:12:11,058 | INFO     | [data] control thread has finished
[2025-06-03 14:45:22] 2025-06-03 11:12:11,065 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:45:22] 2025-06-03 11:12:11,384 | INFO     | all job control threads have been joined
[2025-06-03 14:45:22] 2025-06-03 11:12:11,431 | INFO     | [payload] control thread has finished
[2025-06-03 14:45:22] 2025-06-03 11:12:11,518 | INFO     | [job] validate thread has finished
[2025-06-03 14:45:22] 2025-06-03 11:12:11,621 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:45:22] 2025-06-03 11:12:11,689 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:45:22] 2025-06-03 11:12:11,986 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:45:22] 2025-06-03 11:12:12,032 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:45:22] 2025-06-03 11:12:12,251 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:45:22] 2025-06-03 11:12:12,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:45:22] 2025-06-03 11:12:12,390 | INFO     | [job] control thread has finished
[2025-06-03 14:45:22] 2025-06-03 11:12:13,038 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:45:22] 2025-06-03 11:12:16,328 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:45:22] 2025-06-03 11:12:16,447 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140177305421632)>', '<ExcThread(monitor, started 140176709900032)>']
[2025-06-03 14:45:22] 2025-06-03 11:12:16,716 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:45:22] 2025-06-03 11:12:16,716 | INFO     | [monitor] control thread has ended
[2025-06-03 14:45:22] 2025-06-03 11:12:21,472 | INFO     | all workflow threads have been joined
[2025-06-03 14:45:22] 2025-06-03 11:12:21,472 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:45:22] 2025-06-03 11:12:21,473 | INFO     | traces error code: 0
[2025-06-03 14:45:22] 2025-06-03 11:12:21,473 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:45:22] 2025-06-03 11:12:21,850 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:45:22] 2025-06-03 11:12:21,966 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:45:22] 2025-06-03 11:12:22,036 [wrapper] pilotpid: 25585
[2025-06-03 14:45:22] 2025-06-03 11:12:22,086 [wrapper] Pilot exit status: 0
[2025-06-03 14:45:22] 2025-06-03 11:12:22,338 [wrapper] pandaids: 6677393887
[2025-06-03 14:45:22] 2025-06-03 11:12:23,327 [wrapper] cleanup supervisor_pilot 10632 25586
[2025-06-03 14:45:22] 2025-06-03 11:12:23,437 [wrapper] Test setup, not cleaning
[2025-06-03 14:45:22] 2025-06-03 11:12:23,582 [wrapper] apfmon messages muted
[2025-06-03 14:45:22] 2025-06-03 11:12:23,703 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:45:22] 2025-06-03 11:12:23,823 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:45:22]  *** Error codes and diagnostics ***
[2025-06-03 14:45:22]     "exeErrorCode": 0,
[2025-06-03 14:45:22]     "exeErrorDiag": "",
[2025-06-03 14:45:22]     "pilotErrorCode": 0,
[2025-06-03 14:45:22]     "pilotErrorDiag": "",
[2025-06-03 14:45:22]  *** Listing of results directory ***
[2025-06-03 14:45:22] total 391000
[2025-06-03 14:45:22] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:02 pilot3.tar.gz
[2025-06-03 14:45:22] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:12 queuedata.json
[2025-06-03 14:45:22] -rwx------. 1 boinc boinc     37140 Jun  2 21:12 runpilot2-wrapper.sh
[2025-06-03 14:45:22] -rw-r--r--. 1 boinc boinc       100 Jun  3 09:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:45:22] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 09:52 run_atlas
[2025-06-03 14:45:22] -rw-r--r--. 1 boinc boinc       105 Jun  3 09:52 job.xml
[2025-06-03 14:45:22] -rw-r--r--. 2 boinc boinc 214615596 Jun  3 09:52 EVNT.45006593._000355.pool.root.1
[2025-06-03 14:45:22] -rw-r--r--. 2 boinc boinc     15093 Jun  3 09:52 start_atlas.sh
[2025-06-03 14:45:22] drwxrwx--x. 2 boinc boinc        68 Jun  3 09:52 shared
[2025-06-03 14:45:22] -rw-r--r--. 2 boinc boinc    508870 Jun  3 09:52 input.tar.gz
[2025-06-03 14:45:22] -rw-r--r--. 1 boinc boinc      6391 Jun  3 09:52 init_data.xml
[2025-06-03 14:45:22] -rw-r--r--. 1 boinc boinc         0 Jun  3 09:52 boinc_lockfile
[2025-06-03 14:45:22] -rw-r--r--. 1 boinc boinc      2521 Jun  3 09:52 pandaJob.out
[2025-06-03 14:45:22] -rw-------. 1 boinc boinc    985499 Jun  3 09:52 agis_schedconf.cvmfs.json
[2025-06-03 14:45:22] drwx------. 4 boinc boinc      4096 Jun  3 09:52 pilot3
[2025-06-03 14:45:22] -rw-------. 1 boinc boinc 179136252 Jun  3 13:09 HITS.45006595._008867.pool.root.1
[2025-06-03 14:45:22] -rw-r--r--. 1 boinc boinc       531 Jun  3 13:09 boinc_task_state.xml
[2025-06-03 14:45:22] -rw-------. 1 boinc boinc      1030 Jun  3 13:10 memory_monitor_summary.json
[2025-06-03 14:45:22] -rw-------. 1 boinc boinc   1603667 Jun  3 13:10 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:45:22] -rw-------. 1 boinc boinc    369173 Jun  3 13:10 log.45006595._008867.job.log.tgz.1
[2025-06-03 14:45:22] -rw-------. 1 boinc boinc        95 Jun  3 13:11 pilot_heartbeat.json
[2025-06-03 14:45:22] -rw-------. 1 boinc boinc      7687 Jun  3 13:12 heartbeat.json
[2025-06-03 14:45:22] -rw-------. 1 boinc boinc      4931 Jun  3 13:12 pilotlog.txt
[2025-06-03 14:45:22] -rw-------. 1 boinc boinc   1035477 Jun  3 13:12 log.45006595._008867.job.log.1
[2025-06-03 14:45:22] -rw-------. 1 boinc boinc       357 Jun  3 13:12 output.list
[2025-06-03 14:45:22] -rw-r--r--. 1 boinc boinc       620 Jun  3 13:12 runtime_log
[2025-06-03 14:45:22] -rw-------. 1 boinc boinc   1423360 Jun  3 13:12 result.tar.gz
[2025-06-03 14:45:22] -rw-r--r--. 1 boinc boinc      8659 Jun  3 13:12 runtime_log.err
[2025-06-03 14:45:22] -rw-------. 1 boinc boinc       656 Jun  3 13:12 h2FNDm8kPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwDgKDmcHXK9m.diag
[2025-06-03 14:45:22] -rw-r--r--. 1 boinc boinc      8192 Jun  3 14:45 boinc_mmap_file
[2025-06-03 14:45:22] -rw-r--r--. 1 boinc boinc        28 Jun  3 14:45 wrapper_checkpoint.txt
[2025-06-03 14:45:22] -rw-r--r--. 1 boinc boinc     20598 Jun  3 14:45 stderr.txt
[2025-06-03 14:45:22] HITS file was successfully produced:
[2025-06-03 14:45:22] -rw-------. 1 boinc boinc 179136252 Jun  3 13:09 shared/HITS.pool.root.1
[2025-06-03 14:45:22]  *** Contents of shared directory: ***
[2025-06-03 14:45:22] total 386436
[2025-06-03 14:45:22] -rw-r--r--. 2 boinc boinc 214615596 Jun  3 09:52 ATLAS.root_0
[2025-06-03 14:45:22] -rw-r--r--. 2 boinc boinc     15093 Jun  3 09:52 start_atlas.sh
[2025-06-03 14:45:22] -rw-r--r--. 2 boinc boinc    508870 Jun  3 09:52 input.tar.gz
[2025-06-03 14:45:22] -rw-------. 1 boinc boinc 179136252 Jun  3 13:09 HITS.pool.root.1
[2025-06-03 14:45:22] -rw-------. 1 boinc boinc   1423360 Jun  3 13:12 result.tar.gz
14:45:24 (21845): run_atlas exited; CPU time 44887.490900
14:45:24 (21845): called boinc_finish(0)

</stderr_txt>
]]>

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