Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:31:16 (924): wrapper (7.7.26015): starting
09:31:16 (924): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 09:31:16] Arguments: --nthreads 8
[2025-06-03 09:31:16] Threads: 8
[2025-06-03 09:31:16] Checking for CVMFS
[2025-06-03 09:31:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:31:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:31:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:31:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:31:19] 2.11.2.0 17186 31637 102568 146731 1 16 14435466 25165824 4632 130560 0 16589848 99.868 17422291 2019 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 09:31:19] CVMFS is ok
[2025-06-03 09:31:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:31:19] Checking for apptainer binary...
[2025-06-03 09:31:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:31:19] Running /usr/bin/apptainer --version
[2025-06-03 09:31:19] apptainer version 1.3.2-1.el7
[2025-06-03 09:31:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:31:26] cg-vwn311.simple-grid.lan
[2025-06-03 09:31:26] apptainer works
[2025-06-03 09:31:26] Set ATHENA_PROC_NUMBER=8
[2025-06-03 09:31:26] Set ATHENA_CORE_NUMBER=8
[2025-06-03 09:31:26] Starting ATLAS job with PandaID=6677398142
[2025-06-03 09:31:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:37:16]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:37:16] 2025-06-03 11:23:00,202 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6677398142/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:37:16] 2025-06-03 11:23:00,202 | INFO     | extracted standard info from prmon json
[2025-06-03 13:37:16] 2025-06-03 11:23:00,203 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:37:16] 2025-06-03 11:23:00,203 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:37:16] 2025-06-03 11:23:00,203 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:37:16] 2025-06-03 11:23:00,203 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:37:16] 2025-06-03 11:23:00,208 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:37:16] 2025-06-03 11:23:00,208 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 13:37:16] 2025-06-03 11:23:00,210 | INFO     | sum of deviations: 51816389609.999985
[2025-06-03 13:37:16] 2025-06-03 11:23:00,210 | INFO     | mean x: 1748943103.0
[2025-06-03 13:37:16] 2025-06-03 11:23:00,210 | INFO     | mean y: 2451497.9348837207
[2025-06-03 13:37:16] 2025-06-03 11:23:00,210 | INFO     | -- intersect: -29405069940.33797
[2025-06-03 13:37:16] 2025-06-03 11:23:00,211 | INFO     | intersect: -29405069940.33797
[2025-06-03 13:37:16] 2025-06-03 11:23:00,211 | INFO     | chi2: 7.660651406086924
[2025-06-03 13:37:16] 2025-06-03 11:23:00,211 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 13:37:16] 2025-06-03 11:23:00,213 | INFO     | sum of deviations: 65037992447.5
[2025-06-03 13:37:16] 2025-06-03 11:23:00,213 | INFO     | mean x: 1748942950.5
[2025-06-03 13:37:16] 2025-06-03 11:23:00,213 | INFO     | mean y: 2460903.1476190477
[2025-06-03 13:37:16] 2025-06-03 11:23:00,213 | INFO     | -- intersect: -39608585055.55326
[2025-06-03 13:37:16] 2025-06-03 11:23:00,214 | INFO     | intersect: -39608585055.55326
[2025-06-03 13:37:16] 2025-06-03 11:23:00,214 | INFO     | chi2: 6.968402557502172
[2025-06-03 13:37:16] 2025-06-03 11:23:00,214 | INFO     | current chi2=6.968402557502172 (change=9.036422777764198 %)
[2025-06-03 13:37:16] 2025-06-03 11:23:00,214 | INFO     | right removable region: 209
[2025-06-03 13:37:16] 2025-06-03 11:23:00,215 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 13:37:16] 2025-06-03 11:23:00,216 | INFO     | sum of deviations: -24172467956.499996
[2025-06-03 13:37:16] 2025-06-03 11:23:00,217 | INFO     | mean x: 1748943255.5
[2025-06-03 13:37:16] 2025-06-03 11:23:00,217 | INFO     | mean y: 2506634.2333333334
[2025-06-03 13:37:16] 2025-06-03 11:23:00,217 | INFO     | -- intersect: 14724623201.8983
[2025-06-03 13:37:16] 2025-06-03 11:23:00,217 | INFO     | intersect: 14724623201.8983
[2025-06-03 13:37:16] 2025-06-03 11:23:00,217 | INFO     | chi2: 2.544865008937921
[2025-06-03 13:37:16] 2025-06-03 11:23:00,218 | INFO     | current chi2=2.544865008937921 (change=66.78004422814688 %)
[2025-06-03 13:37:16] 2025-06-03 11:23:00,218 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 13:37:16] 2025-06-03 11:23:00,220 | INFO     | sum of deviations: -61821992690.0
[2025-06-03 13:37:16] 2025-06-03 11:23:00,220 | INFO     | mean x: 1748943408.0
[2025-06-03 13:37:16] 2025-06-03 11:23:00,220 | INFO     | mean y: 2535110.8780487804
[2025-06-03 13:37:16] 2025-06-03 11:23:00,220 | INFO     | -- intersect: 40477742574.81168
[2025-06-03 13:37:16] 2025-06-03 11:23:00,220 | INFO     | intersect: 40477742574.81168
[2025-06-03 13:37:16] 2025-06-03 11:23:00,220 | INFO     | chi2: 1.0262421403897313
[2025-06-03 13:37:16] 2025-06-03 11:23:00,221 | INFO     | current chi2=1.0262421403897313 (change=59.67400483776445 %)
[2025-06-03 13:37:16] 2025-06-03 11:23:00,221 | INFO     | sum of square deviations: 2480604650.0
[2025-06-03 13:37:16] 2025-06-03 11:23:00,223 | INFO     | sum of deviations: -62757884732.5
[2025-06-03 13:37:16] 2025-06-03 11:23:00,223 | INFO     | mean x: 1748943560.5
[2025-06-03 13:37:16] 2025-06-03 11:23:00,223 | INFO     | mean y: 2535808.195
[2025-06-03 13:37:16] 2025-06-03 11:23:00,223 | INFO     | -- intersect: 44249811718.730415
[2025-06-03 13:37:16] 2025-06-03 11:23:00,223 | INFO     | intersect: 44249811718.730415
[2025-06-03 13:37:16] 2025-06-03 11:23:00,223 | INFO     | chi2: 0.9917167104072495
[2025-06-03 13:37:16] 2025-06-03 11:23:00,224 | INFO     | current chi2=0.9917167104072495 (change=3.3642576760071643 %)
[2025-06-03 13:37:16] 2025-06-03 11:23:00,224 | INFO     | left removable region: 30
[2025-06-03 13:37:16] 2025-06-03 11:23:00,224 | INFO     | sum of square deviations: 1778377530.0
[2025-06-03 13:37:16] 2025-06-03 11:23:00,225 | INFO     | sum of deviations: -30075890302.0
[2025-06-03 13:37:16] 2025-06-03 11:23:00,226 | INFO     | mean x: 1748943835.0
[2025-06-03 13:37:16] 2025-06-03 11:23:00,226 | INFO     | mean y: 2531782.530726257
[2025-06-03 13:37:16] 2025-06-03 11:23:00,226 | INFO     | -- intersect: 29580639939.24995
[2025-06-03 13:37:16] 2025-06-03 11:23:00,226 | INFO     | intersect: 29580639939.24995
[2025-06-03 13:37:16] 2025-06-03 11:23:00,226 | INFO     | chi2: 0.1750058508386092
[2025-06-03 13:37:16] 2025-06-03 11:23:00,226 | INFO     | -- intersect: 29580639939.24995
[2025-06-03 13:37:16] 2025-06-03 11:23:00,227 | INFO     | current memory leak: -16.91 B/s (using 179 data points, chi2=0.18)
[2025-06-03 13:37:16] 2025-06-03 11:23:00,227 | INFO     | ..............................
[2025-06-03 13:37:16] 2025-06-03 11:23:00,228 | INFO     | . Timing measurements:
[2025-06-03 13:37:16] 2025-06-03 11:23:00,228 | INFO     | . get job = 0 s
[2025-06-03 13:37:16] 2025-06-03 11:23:00,228 | INFO     | . initial setup = 14 s
[2025-06-03 13:37:16] 2025-06-03 11:23:00,228 | INFO     | . payload setup = 157 s
[2025-06-03 13:37:16] 2025-06-03 11:23:00,228 | INFO     | . stage-in = 0 s
[2025-06-03 13:37:16] 2025-06-03 11:23:00,228 | INFO     | . payload execution = 13260 s
[2025-06-03 13:37:16] 2025-06-03 11:23:00,228 | INFO     | . stage-out = 3 s
[2025-06-03 13:37:16] 2025-06-03 11:23:00,228 | INFO     | . log creation = 1 s
[2025-06-03 13:37:16] 2025-06-03 11:23:00,228 | INFO     | ..............................
[2025-06-03 13:37:16] 2025-06-03 11:23:00,800 | INFO     | 
[2025-06-03 13:37:16] 2025-06-03 11:23:00,800 | INFO     | job summary report
[2025-06-03 13:37:16] 2025-06-03 11:23:00,800 | INFO     | --------------------------------------------------
[2025-06-03 13:37:16] 2025-06-03 11:23:00,801 | INFO     | PanDA job id: 6677398142
[2025-06-03 13:37:16] 2025-06-03 11:23:00,801 | INFO     | task id: 45006595
[2025-06-03 13:37:16] 2025-06-03 11:23:00,801 | INFO     | errors: (none)
[2025-06-03 13:37:16] 2025-06-03 11:23:00,801 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:37:16] 2025-06-03 11:23:00,801 | INFO     | pilot state: finished 
[2025-06-03 13:37:16] 2025-06-03 11:23:00,801 | INFO     | transexitcode: 0
[2025-06-03 13:37:16] 2025-06-03 11:23:00,801 | INFO     | exeerrorcode: 0
[2025-06-03 13:37:16] 2025-06-03 11:23:00,801 | INFO     | exeerrordiag: 
[2025-06-03 13:37:16] 2025-06-03 11:23:00,801 | INFO     | exitcode: 0
[2025-06-03 13:37:16] 2025-06-03 11:23:00,801 | INFO     | exitmsg: OK
[2025-06-03 13:37:16] 2025-06-03 11:23:00,801 | INFO     | cpuconsumptiontime: 47922 s
[2025-06-03 13:37:16] 2025-06-03 11:23:00,802 | INFO     | nevents: 400
[2025-06-03 13:37:16] 2025-06-03 11:23:00,802 | INFO     | neventsw: 0
[2025-06-03 13:37:16] 2025-06-03 11:23:00,802 | INFO     | pid: 15498
[2025-06-03 13:37:16] 2025-06-03 11:23:00,802 | INFO     | pgrp: 15498
[2025-06-03 13:37:16] 2025-06-03 11:23:00,802 | INFO     | corecount: 8
[2025-06-03 13:37:16] 2025-06-03 11:23:00,802 | INFO     | event service: False
[2025-06-03 13:37:16] 2025-06-03 11:23:00,802 | INFO     | sizes: {0: 2404955, 1: 2405210, 12: 2405210, 23: 2405238, 34: 2405266, 44: 2405294, 55: 2405450, 66: 2405478, 77: 2405506, 84: 2405768, 87: 2405796, 13421: 2435526
[2025-06-03 13:37:16] 2025-06-03 11:23:00,802 | INFO     | --------------------------------------------------
[2025-06-03 13:37:16] 2025-06-03 11:23:00,802 | INFO     | 
[2025-06-03 13:37:16] 2025-06-03 11:23:00,802 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-03 13:37:16] 2025-06-03 11:23:01,155 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,156 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,156 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,156 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,156 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,156 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,156 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,157 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,157 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,157 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,157 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,157 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,157 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,157 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,157 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,157 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,158 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:37:16] 2025-06-03 11:23:01,158 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,158 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:37:16] 2025-06-03 11:23:01,158 | INFO     | job 6677398142 has completed (purged errors)
[2025-06-03 13:37:16] 2025-06-03 11:23:01,158 | INFO     | overall cleanup function is called
[2025-06-03 13:37:16] 2025-06-03 11:23:02,167 | INFO     | --- collectZombieJob: --- 10, [15498]
[2025-06-03 13:37:16] 2025-06-03 11:23:02,167 | INFO     | zombie collector waiting for pid 15498
[2025-06-03 13:37:16] 2025-06-03 11:23:02,167 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:37:16] 2025-06-03 11:23:02,168 | INFO     | collected zombie processes
[2025-06-03 13:37:16] 2025-06-03 11:23:02,168 | INFO     | will attempt to kill all subprocesses of pid=15498
[2025-06-03 13:37:16] 2025-06-03 11:23:02,275 | INFO     | process IDs to be killed: [15498] (in reverse order)
[2025-06-03 13:37:16] 2025-06-03 11:23:02,882 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:37:16] 2025-06-03 11:23:02,882 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:37:16] 2025-06-03 11:23:02,889 | INFO     | did not find any defunct processes belonging to 15498
[2025-06-03 13:37:16] 2025-06-03 11:23:02,892 | INFO     | did not find any defunct processes belonging to 15498
[2025-06-03 13:37:16] 2025-06-03 11:23:02,893 | INFO     | ready for new job
[2025-06-03 13:37:16] 2025-06-03 11:23:02,893 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:37:16] 2025-06-03 11:23:02,895 | INFO     | **************************************
[2025-06-03 13:37:16] 2025-06-03 11:23:02,895 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:37:16] 2025-06-03 11:23:02,895 | INFO     | **************************************
[2025-06-03 13:37:16] 2025-06-03 11:23:02,895 | INFO     | 
[2025-06-03 13:37:16] 2025-06-03 11:23:02,896 | INFO     | pilot is running in a VM
[2025-06-03 13:37:16] 2025-06-03 11:23:02,896 | INFO     | architecture information:
[2025-06-03 13:37:16] 2025-06-03 11:23:02,910 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:37:16] 2025-06-03 11:23:03,150 | INFO     | cat /etc/os-release:
[2025-06-03 13:37:16] NAME="CentOS Linux"
[2025-06-03 13:37:16] VERSION="7 (Core)"
[2025-06-03 13:37:16] ID="centos"
[2025-06-03 13:37:16] ID_LIKE="rhel fedora"
[2025-06-03 13:37:16] VERSION_ID="7"
[2025-06-03 13:37:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:37:16] ANSI_COLOR="0;31"
[2025-06-03 13:37:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:37:16] HOME_URL="https://www.centos.org/"
[2025-06-03 13:37:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:37:16] 
[2025-06-03 13:37:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:37:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:37:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:37:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:37:16] 
[2025-06-03 13:37:16] 2025-06-03 11:23:03,151 | INFO     | **************************************
[2025-06-03 13:37:16] 2025-06-03 11:23:03,654 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-03 13:37:16] 2025-06-03 11:23:03,913 | INFO     | sufficient remaining disk space (496920166400 B)
[2025-06-03 13:37:16] 2025-06-03 11:23:03,913 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:37:16] 2025-06-03 11:23:03,913 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:37:16] 2025-06-03 11:23:03,914 | INFO     | update_server=False
[2025-06-03 13:37:16] 2025-06-03 11:23:03,914 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:37:16] 2025-06-03 11:23:03,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:37:16] 2025-06-03 11:23:03,915 | INFO     | aborting loop
[2025-06-03 13:37:16] 2025-06-03 11:23:04,745 | INFO     | all data control threads have been joined
[2025-06-03 13:37:16] 2025-06-03 11:23:04,884 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:37:16] 2025-06-03 11:23:04,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:37:16] 2025-06-03 11:23:04,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:37:16] 2025-06-03 11:23:04,920 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:37:16] 2025-06-03 11:23:04,921 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:37:16] 2025-06-03 11:23:04,922 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:37:16] 2025-06-03 11:23:05,087 | INFO     | all payload control threads have been joined
[2025-06-03 13:37:16] 2025-06-03 11:23:05,117 | INFO     | all job control threads have been joined
[2025-06-03 13:37:16] 2025-06-03 11:23:05,135 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:37:16] 2025-06-03 11:23:05,328 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:37:16] 2025-06-03 11:23:05,374 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:37:16] 2025-06-03 11:23:05,391 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:37:16] 2025-06-03 11:23:05,542 | INFO     | [job] validate thread has finished
[2025-06-03 13:37:16] 2025-06-03 11:23:05,555 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:37:16] 2025-06-03 11:23:05,556 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:37:16] 2025-06-03 11:23:05,751 | INFO     | [data] control thread has finished
[2025-06-03 13:37:16] 2025-06-03 11:23:06,093 | INFO     | [payload] control thread has finished
[2025-06-03 13:37:16] 2025-06-03 11:23:06,123 | INFO     | [job] control thread has finished
[2025-06-03 13:37:16] 2025-06-03 11:23:06,323 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:37:16] 2025-06-03 11:23:06,379 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:37:16] 2025-06-03 11:23:06,380 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:37:16] 2025-06-03 11:23:06,498 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:37:16] 2025-06-03 11:23:07,399 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:37:16] 2025-06-03 11:23:10,331 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:37:16] 2025-06-03 11:23:11,703 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140084598191936)>', '<ExcThread(monitor, started 140083638298368)>']
[2025-06-03 13:37:16] 2025-06-03 11:23:11,927 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:37:16] 2025-06-03 11:23:11,927 | INFO     | [monitor] control thread has ended
[2025-06-03 13:37:16] 2025-06-03 11:23:16,728 | INFO     | all workflow threads have been joined
[2025-06-03 13:37:16] 2025-06-03 11:23:16,728 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:37:16] 2025-06-03 11:23:16,729 | INFO     | traces error code: 0
[2025-06-03 13:37:16] 2025-06-03 11:23:16,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:37:16] 2025-06-03 11:23:17,024 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:37:16] 2025-06-03 11:23:17,080 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:37:16] 2025-06-03 11:23:17,148 [wrapper] pilotpid: 4925
[2025-06-03 13:37:16] 2025-06-03 11:23:17,245 [wrapper] Pilot exit status: 0
[2025-06-03 13:37:16] 2025-06-03 11:23:17,689 [wrapper] pandaids: 6677398142
[2025-06-03 13:37:16] 2025-06-03 11:23:18,473 [wrapper] cleanup supervisor_pilot 26918 4926
[2025-06-03 13:37:16] 2025-06-03 11:23:18,484 [wrapper] Test setup, not cleaning
[2025-06-03 13:37:16] 2025-06-03 11:23:18,490 [wrapper] apfmon messages muted
[2025-06-03 13:37:16] 2025-06-03 11:23:18,499 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:37:16] 2025-06-03 11:23:18,506 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:37:16]  *** Error codes and diagnostics ***
[2025-06-03 13:37:16]     "exeErrorCode": 0,
[2025-06-03 13:37:16]     "exeErrorDiag": "",
[2025-06-03 13:37:16]     "pilotErrorCode": 0,
[2025-06-03 13:37:16]     "pilotErrorDiag": "",
[2025-06-03 13:37:16]  *** Listing of results directory ***
[2025-06-03 13:37:16] total 388432
[2025-06-03 13:37:16] -rw-r--r--. 1 boinc boinc      5111 Jun  2 22:10 queuedata.json
[2025-06-03 13:37:16] -rwx------. 1 boinc boinc     37140 Jun  2 22:11 runpilot2-wrapper.sh
[2025-06-03 13:37:16] -rw-r--r--. 1 boinc boinc    495897 Jun  2 22:11 pilot3.tar.gz
[2025-06-03 13:37:16] -rw-r--r--. 1 boinc boinc       100 Jun  3 09:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:37:16] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 09:31 run_atlas
[2025-06-03 13:37:16] -rw-r--r--. 1 boinc boinc       105 Jun  3 09:31 job.xml
[2025-06-03 13:37:16] -rw-r--r--. 1 boinc boinc      6390 Jun  3 09:31 init_data.xml
[2025-06-03 13:37:16] -rw-r--r--. 2 boinc boinc 214518721 Jun  3 09:31 EVNT.45006593._000428.pool.root.1
[2025-06-03 13:37:16] -rw-r--r--. 2 boinc boinc     15093 Jun  3 09:31 start_atlas.sh
[2025-06-03 13:37:16] drwxrwx--x. 2 boinc boinc        68 Jun  3 09:31 shared
[2025-06-03 13:37:16] -rw-r--r--. 2 boinc boinc    508873 Jun  3 09:31 input.tar.gz
[2025-06-03 13:37:16] -rw-r--r--. 1 boinc boinc         0 Jun  3 09:31 boinc_lockfile
[2025-06-03 13:37:16] -rw-r--r--. 1 boinc boinc      2524 Jun  3 09:31 pandaJob.out
[2025-06-03 13:37:16] -rw-------. 1 boinc boinc    985499 Jun  3 09:34 agis_schedconf.cvmfs.json
[2025-06-03 13:37:16] drwx------. 4 boinc boinc      4096 Jun  3 09:34 pilot3
[2025-06-03 13:37:16] -rw-------. 1 boinc boinc 176281850 Jun  3 13:20 HITS.45006595._010701.pool.root.1
[2025-06-03 13:37:16] -rw-r--r--. 1 boinc boinc       531 Jun  3 13:20 boinc_task_state.xml
[2025-06-03 13:37:16] -rw-------. 1 boinc boinc      1019 Jun  3 13:21 memory_monitor_summary.json
[2025-06-03 13:37:16] -rw-------. 1 boinc boinc   1603667 Jun  3 13:21 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:37:16] -rw-------. 1 boinc boinc    394222 Jun  3 13:21 log.45006595._010701.job.log.tgz.1
[2025-06-03 13:37:16] -rw-------. 1 boinc boinc        95 Jun  3 13:22 pilot_heartbeat.json
[2025-06-03 13:37:16] -rw-------. 1 boinc boinc      7695 Jun  3 13:23 heartbeat.json
[2025-06-03 13:37:16] -rw-------. 1 boinc boinc      4416 Jun  3 13:23 pilotlog.txt
[2025-06-03 13:37:16] -rw-------. 1 boinc boinc   1171357 Jun  3 13:23 log.45006595._010701.job.log.1
[2025-06-03 13:37:16] -rw-------. 1 boinc boinc       357 Jun  3 13:23 output.list
[2025-06-03 13:37:16] -rw-r--r--. 1 boinc boinc       620 Jun  3 13:23 runtime_log
[2025-06-03 13:37:16] -rw-------. 1 boinc boinc   1587200 Jun  3 13:23 result.tar.gz
[2025-06-03 13:37:16] -rw-r--r--. 1 boinc boinc      8659 Jun  3 13:23 runtime_log.err
[2025-06-03 13:37:16] -rw-------. 1 boinc boinc       657 Jun  3 13:23 FLiMDm7fQg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvVgKDmFXCV2n.diag
[2025-06-03 13:37:16] -rw-r--r--. 1 boinc boinc      8192 Jun  3 13:37 boinc_mmap_file
[2025-06-03 13:37:16] -rw-r--r--. 1 boinc boinc        28 Jun  3 13:37 wrapper_checkpoint.txt
[2025-06-03 13:37:16] -rw-r--r--. 1 boinc boinc     20505 Jun  3 13:37 stderr.txt
[2025-06-03 13:37:16] HITS file was successfully produced:
[2025-06-03 13:37:16] -rw-------. 1 boinc boinc 176281850 Jun  3 13:20 shared/HITS.pool.root.1
[2025-06-03 13:37:16]  *** Contents of shared directory: ***
[2025-06-03 13:37:16] total 383712
[2025-06-03 13:37:16] -rw-r--r--. 2 boinc boinc 214518721 Jun  3 09:31 ATLAS.root_0
[2025-06-03 13:37:16] -rw-r--r--. 2 boinc boinc     15093 Jun  3 09:31 start_atlas.sh
[2025-06-03 13:37:16] -rw-r--r--. 2 boinc boinc    508873 Jun  3 09:31 input.tar.gz
[2025-06-03 13:37:16] -rw-------. 1 boinc boinc 176281850 Jun  3 13:20 HITS.pool.root.1
[2025-06-03 13:37:16] -rw-------. 1 boinc boinc   1587200 Jun  3 13:23 result.tar.gz
13:37:18 (924): run_atlas exited; CPU time 48110.393227
13:37:18 (924): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN