Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:03:39 (4079302): wrapper (7.7.26015): starting
17:03:39 (4079302): wrapper: running run_atlas (--nthreads 12)
[2025-06-02 17:03:39] Arguments: --nthreads 12
[2025-06-02 17:03:39] Threads: 12
[2025-06-02 17:03:39] Checking for CVMFS
[2025-06-02 17:03:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 17:03:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 17:03:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 17:03:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 17:03:39] 2.11.5.0 835854 21054 237180 146723 1 534 26846748 45568001 14496 130560 0 199385571 99.802 121805229 31366 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-02 17:03:39] CVMFS is ok
[2025-06-02 17:03:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 17:03:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 17:03:39] Further information can be found at the LHC@home message board.
[2025-06-02 17:03:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 17:03:39] Checking for apptainer binary...
[2025-06-02 17:03:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 17:03:39] Running /usr/bin/apptainer --version
[2025-06-02 17:03:39] apptainer version 1.4.0-1.el9
[2025-06-02 17:03:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 17:03:39] wns0072.triumf.lcg
[2025-06-02 17:03:39] apptainer works
[2025-06-02 17:03:39] Set ATHENA_PROC_NUMBER=12
[2025-06-02 17:03:39] Set ATHENA_CORE_NUMBER=12
[2025-06-02 17:03:39] Starting ATLAS job with PandaID=6677402387
[2025-06-02 17:03:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 17:06:39]  *** The last 200 lines of the pilot log: ***
[2025-06-02 17:06:39] 2025-06-03 00:06:25,393 | INFO     | extracted standard info from prmon json
[2025-06-02 17:06:39] 2025-06-03 00:06:25,394 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 17:06:39] 2025-06-03 00:06:25,394 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 17:06:39] 2025-06-03 00:06:25,394 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 17:06:39] 2025-06-03 00:06:25,394 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 17:06:39] 2025-06-03 00:06:25,394 | WARNING  | found no stored workdir sizes
[2025-06-02 17:06:39] 2025-06-03 00:06:25,394 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | WARNING  | wrong length of table data, x=[1748909049.0], y=[1089.0] (must be same and length>=4)
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | ..............................
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . Timing measurements:
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . get job = 0 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . initial setup = 2 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . payload setup = 4 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . stage-in = 0 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . payload execution = 14 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . stage-out = 0 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,396 | INFO     | . log creation = 0 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,396 | INFO     | ..............................
[2025-06-02 17:06:39] 2025-06-03 00:06:25,396 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 17:06:39] 2025-06-03 00:06:25,396 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677402387/pilotlog.txt
[2025-06-02 17:06:39] 2025-06-03 00:06:25,406 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 17:06:39] - Log from pilotlog.txt -
[2025-06-02 17:06:39] 2025-06-03 00:06:25,393 | INFO     | extracted standard info from prmon json
[2025-06-02 17:06:39] 2025-06-03 00:06:25,394 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 17:06:39] 2025-06-03 00:06:25,394 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 17:06:39] 2025-06-03 00:06:25,394 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 17:06:39] 2025-06-03 00:06:25,394 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 17:06:39] 2025-06-03 00:06:25,394 | WARNING  | found no stored workdir sizes
[2025-06-02 17:06:39] 2025-06-03 00:06:25,394 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | WARNING  | wrong length of table data, x=[1748909049.0], y=[1089.0] (must be same and length>=4)
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | ..............................
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . Timing measurements:
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . get job = 0 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . initial setup = 2 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . payload setup = 4 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . stage-in = 0 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . payload execution = 14 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . stage-out = 0 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,396 | INFO     | . log creation = 0 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,396 | INFO     | ..............................
[2025-06-02 17:06:39] 2025-06-03 00:06:25,396 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 17:06:39] 2025-06-03 00:06:25,396 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677402387/pilotlog.txt
[2025-06-02 17:06:39] 2025-06-03 00:06:25,406 | WARNING  | 
[2025-06-02 17:06:39] [begin log extracts]
[2025-06-02 17:06:39] - Log from pilotlog.txt -
[2025-06-02 17:06:39] 2025-06-03 00:06:25,393 | INFO     | extracted standard info from prmon json
[2025-06-02 17:06:39] 2025-06-03 00:06:25,394 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 17:06:39] 2025-06-03 00:06:25,394 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 17:06:39] 2025-06-03 00:06:25,394 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 17:06:39] 2025-06-03 00:06:25,394 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 17:06:39] 2025-06-03 00:06:25,394 | WARNING  | found no stored workdir sizes
[2025-06-02 17:06:39] 2025-06-03 00:06:25,394 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | WARNING  | wrong length of table data, x=[1748909049.0], y=[1089.0] (must be same and length>=4)
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | ..............................
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . Timing measurements:
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . get job = 0 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . initial setup = 2 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . payload setup = 4 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . stage-in = 0 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . payload execution = 14 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,395 | INFO     | . stage-out = 0 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,396 | INFO     | . log creation = 0 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,396 | INFO     | ..............................
[2025-06-02 17:06:39] 2025-06-03 00:06:25,396 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 17:06:39] 2025-06-03 00:06:25,396 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677402387/pilotlog.txt
[2025-06-02 17:06:39] [end log extracts]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,406 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 17:06:39] 2025-06-03 00:06:25,407 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 17:06:39] 2025-06-03 00:06:25,469 | INFO     | 
[2025-06-02 17:06:39] 2025-06-03 00:06:25,470 | INFO     | job summary report
[2025-06-02 17:06:39] 2025-06-03 00:06:25,470 | INFO     | --------------------------------------------------
[2025-06-02 17:06:39] 2025-06-03 00:06:25,470 | INFO     | PanDA job id: 6677402387
[2025-06-02 17:06:39] 2025-06-03 00:06:25,470 | INFO     | task id: 45006595
[2025-06-02 17:06:39] 2025-06-03 00:06:25,470 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 17:04:15,615 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 17:06:39] 2025-06-03 00:06:25,470 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 17:06:39] 2025-06-03 00:06:25,470 | INFO     | pilot state: failed 
[2025-06-02 17:06:39] 2025-06-03 00:06:25,470 | INFO     | transexitcode: 65
[2025-06-02 17:06:39] 2025-06-03 00:06:25,470 | INFO     | exeerrorcode: 65
[2025-06-02 17:06:39] 2025-06-03 00:06:25,470 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 17:06:39] 2025-06-03 00:06:25,470 | INFO     | exitcode: 65
[2025-06-02 17:06:39] 2025-06-03 00:06:25,470 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 17:06:39] 2025-06-03 00:06:25,470 | INFO     | cpuconsumptiontime: 16 s
[2025-06-02 17:06:39] 2025-06-03 00:06:25,470 | INFO     | nevents: 0
[2025-06-02 17:06:39] 2025-06-03 00:06:25,470 | INFO     | neventsw: 0
[2025-06-02 17:06:39] 2025-06-03 00:06:25,470 | INFO     | pid: 4089632
[2025-06-02 17:06:39] 2025-06-03 00:06:25,471 | INFO     | pgrp: 4089632
[2025-06-02 17:06:39] 2025-06-03 00:06:25,471 | INFO     | corecount: 12
[2025-06-02 17:06:39] 2025-06-03 00:06:25,471 | INFO     | event service: False
[2025-06-02 17:06:39] 2025-06-03 00:06:25,471 | INFO     | sizes: {0: 2405179, 3: 2405385, 11: 2405413, 22: 2428561, 23: 2432796, 25: 2432824, 144: 2433094}
[2025-06-02 17:06:39] 2025-06-03 00:06:25,471 | INFO     | --------------------------------------------------
[2025-06-02 17:06:39] 2025-06-03 00:06:25,471 | INFO     | 
[2025-06-02 17:06:39] 2025-06-03 00:06:25,471 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 17:06:39] 2025-06-03 00:06:25,484 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,484 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,484 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,484 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,484 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,485 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,485 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,485 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,485 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,485 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,485 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,485 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,485 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,485 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,485 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,485 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,485 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,485 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 17:06:39] 2025-06-03 00:06:25,485 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,485 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 17:06:39] 2025-06-03 00:06:25,485 | INFO     | job 6677402387 has completed (purged errors)
[2025-06-02 17:06:39] 2025-06-03 00:06:25,486 | INFO     | overall cleanup function is called
[2025-06-02 17:06:39] 2025-06-03 00:06:26,491 | INFO     | --- collectZombieJob: --- 10, [4089632]
[2025-06-02 17:06:39] 2025-06-03 00:06:26,491 | INFO     | zombie collector waiting for pid 4089632
[2025-06-02 17:06:39] 2025-06-03 00:06:26,491 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 17:06:39] 2025-06-03 00:06:26,491 | INFO     | collected zombie processes
[2025-06-02 17:06:39] 2025-06-03 00:06:26,491 | INFO     | will attempt to kill all subprocesses of pid=4089632
[2025-06-02 17:06:39] 2025-06-03 00:06:26,640 | INFO     | process IDs to be killed: [4089632] (in reverse order)
[2025-06-02 17:06:39] 2025-06-03 00:06:26,698 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 17:06:39] 2025-06-03 00:06:26,698 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 17:06:39] 2025-06-03 00:06:26,704 | INFO     | did not find any defunct processes belonging to 4089632
[2025-06-02 17:06:39] 2025-06-03 00:06:26,710 | INFO     | did not find any defunct processes belonging to 4089632
[2025-06-02 17:06:39] 2025-06-03 00:06:26,711 | INFO     | ready for new job
[2025-06-02 17:06:39] 2025-06-03 00:06:26,711 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 17:06:39] 2025-06-03 00:06:26,712 | INFO     | **************************************
[2025-06-02 17:06:39] 2025-06-03 00:06:26,713 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 17:06:39] 2025-06-03 00:06:26,713 | INFO     | **************************************
[2025-06-02 17:06:39] 2025-06-03 00:06:26,713 | INFO     | 
[2025-06-02 17:06:39] 2025-06-03 00:06:26,714 | INFO     | architecture information:
[2025-06-02 17:06:39] 2025-06-03 00:06:26,715 | INFO     | executing command: cat /etc/os-release
[2025-06-02 17:06:39] 2025-06-03 00:06:26,724 | INFO     | cat /etc/os-release:
[2025-06-02 17:06:39] NAME="CentOS Linux"
[2025-06-02 17:06:39] VERSION="7 (Core)"
[2025-06-02 17:06:39] ID="centos"
[2025-06-02 17:06:39] ID_LIKE="rhel fedora"
[2025-06-02 17:06:39] VERSION_ID="7"
[2025-06-02 17:06:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 17:06:39] ANSI_COLOR="0;31"
[2025-06-02 17:06:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 17:06:39] HOME_URL="https://www.centos.org/"
[2025-06-02 17:06:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 17:06:39] 
[2025-06-02 17:06:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 17:06:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 17:06:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 17:06:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 17:06:39] 
[2025-06-02 17:06:39] 2025-06-03 00:06:26,724 | INFO     | **************************************
[2025-06-02 17:06:39] 2025-06-03 00:06:27,227 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 17:06:39] 2025-06-03 00:06:27,238 | INFO     | sufficient remaining disk space (1984587366400 B)
[2025-06-02 17:06:39] 2025-06-03 00:06:27,239 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 17:06:39] 2025-06-03 00:06:27,239 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 17:06:39] 2025-06-03 00:06:27,239 | INFO     | update_server=False
[2025-06-02 17:06:39] 2025-06-03 00:06:27,239 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 17:06:39] 2025-06-03 00:06:27,239 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 17:06:39] 2025-06-03 00:06:27,239 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 17:06:39] 2025-06-03 00:06:27,487 | INFO     | all job control threads have been joined
[2025-06-02 17:06:39] 2025-06-03 00:06:27,698 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 17:06:39] 2025-06-03 00:06:27,698 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 17:06:39] 2025-06-03 00:06:27,698 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 17:06:39] 2025-06-03 00:06:28,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 17:06:39] 2025-06-03 00:06:28,016 | INFO     | aborting loop
[2025-06-02 17:06:39] 2025-06-03 00:06:28,173 | INFO     | all payload control threads have been joined
[2025-06-02 17:06:39] 2025-06-03 00:06:28,218 | INFO     | all data control threads have been joined
[2025-06-02 17:06:39] 2025-06-03 00:06:28,244 | INFO     | [job] retrieve thread has finished
[2025-06-02 17:06:39] 2025-06-03 00:06:28,245 | INFO     | [job] queue monitor thread has finished
[2025-06-02 17:06:39] 2025-06-03 00:06:28,319 | INFO     | [payload] validate_post thread has finished
[2025-06-02 17:06:39] 2025-06-03 00:06:28,458 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 17:06:39] 2025-06-03 00:06:28,488 | INFO     | [job] control thread has finished
[2025-06-02 17:06:39] 2025-06-03 00:06:28,671 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 17:06:39] 2025-06-03 00:06:28,780 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 17:06:39] 2025-06-03 00:06:28,861 | INFO     | [payload] failed_post thread has finished
[2025-06-02 17:06:39] 2025-06-03 00:06:29,021 | INFO     | [job] job monitor thread has finished
[2025-06-02 17:06:39] 2025-06-03 00:06:29,178 | INFO     | [payload] control thread has finished
[2025-06-02 17:06:39] 2025-06-03 00:06:29,223 | INFO     | [data] control thread has finished
[2025-06-02 17:06:39] 2025-06-03 00:06:29,245 | INFO     | [data] copytool_out thread has finished
[2025-06-02 17:06:39] 2025-06-03 00:06:29,480 | INFO     | [job] validate thread has finished
[2025-06-02 17:06:39] 2025-06-03 00:06:29,600 | INFO     | [data] copytool_in thread has finished
[2025-06-02 17:06:39] 2025-06-03 00:06:29,611 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 17:06:39] 2025-06-03 00:06:29,718 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 17:06:39] 2025-06-03 00:06:32,676 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 17:06:39] 2025-06-03 00:06:34,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139681050027840)>', '<ExcThread(monitor, started 139680389527296)>']
[2025-06-02 17:06:39] 2025-06-03 00:06:34,733 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 17:06:39] 2025-06-03 00:06:34,733 | INFO     | [monitor] control thread has ended
[2025-06-02 17:06:39] 2025-06-03 00:06:39,036 | INFO     | all workflow threads have been joined
[2025-06-02 17:06:39] 2025-06-03 00:06:39,036 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 17:06:39] 2025-06-03 00:06:39,036 | INFO     | traces error code: 0
[2025-06-02 17:06:39] 2025-06-03 00:06:39,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 17:06:39] 2025-06-03 00:06:39,174 [wrapper] ==== pilot stdout END ====
[2025-06-02 17:06:39] 2025-06-03 00:06:39,176 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 17:06:39] 2025-06-03 00:06:39,177 [wrapper] pilotpid: 4083295
[2025-06-02 17:06:39] 2025-06-03 00:06:39,179 [wrapper] Pilot exit status: 0
[2025-06-02 17:06:39] 2025-06-03 00:06:39,186 [wrapper] pandaids: 6677402387
[2025-06-02 17:06:39] 2025-06-03 00:06:39,222 [wrapper] cleanup supervisor_pilot 4083301 4083296
[2025-06-02 17:06:39] 2025-06-03 00:06:39,224 [wrapper] Test setup, not cleaning
[2025-06-02 17:06:39] 2025-06-03 00:06:39,226 [wrapper] apfmon messages muted
[2025-06-02 17:06:39] 2025-06-03 00:06:39,228 [wrapper] ==== wrapper stdout END ====
[2025-06-02 17:06:39] 2025-06-03 00:06:39,230 [wrapper] ==== wrapper stderr END ====
[2025-06-02 17:06:39]  *** Error codes and diagnostics ***
[2025-06-02 17:06:39]     "exeErrorCode": 65,
[2025-06-02 17:06:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 17:06:39]     "pilotErrorCode": 1305,
[2025-06-02 17:06:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 17:06:39]  *** Listing of results directory ***
[2025-06-02 17:06:39] total 216608
[2025-06-02 17:06:39] -rw-r--r--. 1 boinc boinc    495897 Jun  2 14:29 pilot3.tar.gz
[2025-06-02 17:06:39] -rw-r--r--. 1 boinc boinc      5111 Jun  2 15:00 queuedata.json
[2025-06-02 17:06:39] -rwx------. 1 boinc boinc     37140 Jun  2 15:01 runpilot2-wrapper.sh
[2025-06-02 17:06:39] -rw-r--r--. 1 boinc boinc       100 Jun  2 17:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 17:06:39] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 17:03 run_atlas
[2025-06-02 17:06:39] -rw-r--r--. 1 boinc boinc       105 Jun  2 17:03 job.xml
[2025-06-02 17:06:39] -rw-r--r--. 2 boinc boinc 217784133 Jun  2 17:03 EVNT.45006593._000512.pool.root.1
[2025-06-02 17:06:39] -rw-r--r--. 2 boinc boinc     15093 Jun  2 17:03 start_atlas.sh
[2025-06-02 17:06:39] drwxrwx--x. 2 boinc boinc      4096 Jun  2 17:03 shared
[2025-06-02 17:06:39] -rw-r--r--. 2 boinc boinc    508881 Jun  2 17:03 input.tar.gz
[2025-06-02 17:06:39] -rw-r--r--. 1 boinc boinc      6602 Jun  2 17:03 init_data.xml
[2025-06-02 17:06:39] -rw-r--r--. 1 boinc boinc         0 Jun  2 17:03 boinc_lockfile
[2025-06-02 17:06:39] -rw-r--r--. 1 boinc boinc      2524 Jun  2 17:03 pandaJob.out
[2025-06-02 17:06:39] -rw-------. 1 boinc boinc    988081 Jun  2 17:03 agis_schedconf.cvmfs.json
[2025-06-02 17:06:39] -rw-------. 1 boinc boinc   1603667 Jun  2 17:03 agis_ddmendpoints.agis.ALL.json
[2025-06-02 17:06:39] drwx------. 4 boinc boinc      4096 Jun  2 17:03 pilot3
[2025-06-02 17:06:39] -rw-r--r--. 1 boinc boinc       521 Jun  2 17:04 boinc_task_state.xml
[2025-06-02 17:06:39] -rw-------. 1 boinc boinc       957 Jun  2 17:04 memory_monitor_summary.json
[2025-06-02 17:06:39] -rw-------. 1 boinc boinc     20198 Jun  2 17:04 log.45006595._012792.job.log.tgz.1
[2025-06-02 17:06:39] -rw-------. 1 boinc boinc        95 Jun  2 17:05 pilot_heartbeat.json
[2025-06-02 17:06:39] -rw-------. 1 boinc boinc      8325 Jun  2 17:06 heartbeat.json
[2025-06-02 17:06:39] -rw-r--r--. 1 boinc boinc      8192 Jun  2 17:06 boinc_mmap_file
[2025-06-02 17:06:39] -rw-r--r--. 1 boinc boinc        22 Jun  2 17:06 wrapper_checkpoint.txt
[2025-06-02 17:06:39] -rw-------. 1 boinc boinc      4352 Jun  2 17:06 pilotlog.txt
[2025-06-02 17:06:39] -rw-------. 1 boinc boinc     72632 Jun  2 17:06 log.45006595._012792.job.log.1
[2025-06-02 17:06:39] -rw-------. 1 boinc boinc       188 Jun  2 17:06 output.list
[2025-06-02 17:06:39] -rw-r--r--. 1 boinc boinc       620 Jun  2 17:06 runtime_log
[2025-06-02 17:06:39] -rw-------. 1 boinc boinc    112640 Jun  2 17:06 result.tar.gz
[2025-06-02 17:06:39] -rw-------. 1 boinc boinc       644 Jun  2 17:06 VAONDm9OSg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJsgKDmu9YnTn.diag
[2025-06-02 17:06:39] -rw-r--r--. 1 boinc boinc      8484 Jun  2 17:06 runtime_log.err
[2025-06-02 17:06:39] -rw-r--r--. 1 boinc boinc     21438 Jun  2 17:06 stderr.txt
[2025-06-02 17:06:39] No HITS result produced
[2025-06-02 17:06:39]  *** Contents of shared directory: ***
[2025-06-02 17:06:39] total 213312
[2025-06-02 17:06:39] -rw-r--r--. 2 boinc boinc 217784133 Jun  2 17:03 ATLAS.root_0
[2025-06-02 17:06:39] -rw-r--r--. 2 boinc boinc     15093 Jun  2 17:03 start_atlas.sh
[2025-06-02 17:06:39] -rw-r--r--. 2 boinc boinc    508881 Jun  2 17:03 input.tar.gz
[2025-06-02 17:06:39] -rw-------. 1 boinc boinc    112640 Jun  2 17:06 result.tar.gz
17:06:41 (4079302): run_atlas exited; CPU time 18.862729
17:06:41 (4079302): called boinc_finish(0)

</stderr_txt>
]]>

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