Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:25:04 (124721): wrapper (7.7.26015): starting
05:25:04 (124721): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 05:25:04] Arguments: --nthreads 4
[2025-06-04 05:25:04] Threads: 4
[2025-06-04 05:25:04] Checking for CVMFS
[2025-06-04 05:25:04] No cvmfs_config command found, will try listing directly
[2025-06-04 05:25:04] CVMFS is ok
[2025-06-04 05:25:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 05:25:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 05:25:04] Further information can be found at the LHC@home message board.
[2025-06-04 05:25:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:25:04] Checking for apptainer binary...
[2025-06-04 05:25:04] which: no apptainer in ((null))
[2025-06-04 05:25:04] apptainer is not installed, using version from CVMFS
[2025-06-04 05:25:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:25:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-06-04 05:25:04] apptainer works
[2025-06-04 05:25:05] Set ATHENA_PROC_NUMBER=4
[2025-06-04 05:25:05] Set ATHENA_CORE_NUMBER=4
[2025-06-04 05:25:05] Starting ATLAS job with PandaID=6677397547
[2025-06-04 05:25:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:12:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:12:41] 2025-06-04 06:11:14,179 | INFO     | executing command: lscpu
[2025-06-04 08:12:41] 2025-06-04 06:11:14,241 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:12:41] 2025-06-04 06:11:17,096 | WARNING  | process 135301 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:12:41] 2025-06-04 06:11:17,096 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6677397547/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:12:41] 2025-06-04 06:11:17,478 | INFO     | number of running child processes to parent process 135301: 1
[2025-06-04 08:12:41] 2025-06-04 06:11:17,478 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:12:41] 2025-06-04 06:11:19,506 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:12:41] 2025-06-04 06:11:19,506 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6677397547/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:12:41] 2025-06-04 06:11:19,507 | INFO     | extracted standard info from prmon json
[2025-06-04 08:12:41] 2025-06-04 06:11:19,507 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:12:41] 2025-06-04 06:11:19,507 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:12:41] 2025-06-04 06:11:19,508 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:12:41] 2025-06-04 06:11:19,508 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:12:41] 2025-06-04 06:11:19,513 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:12:41] 2025-06-04 06:11:19,514 | INFO     | sum of square deviations: 1342841922.0
[2025-06-04 08:12:41] 2025-06-04 06:11:19,515 | INFO     | sum of deviations: -4506432705.999998
[2025-06-04 08:12:41] 2025-06-04 06:11:19,515 | INFO     | mean x: 1749012486.0
[2025-06-04 08:12:41] 2025-06-04 06:11:19,516 | INFO     | mean y: 2342499.963190184
[2025-06-04 08:12:41] 2025-06-04 06:11:19,516 | INFO     | -- intersect: 5871839825.734617
[2025-06-04 08:12:41] 2025-06-04 06:11:19,516 | INFO     | intersect: 5871839825.734617
[2025-06-04 08:12:41] 2025-06-04 06:11:19,516 | INFO     | chi2: 1.6825576579291652
[2025-06-04 08:12:41] 2025-06-04 06:11:19,517 | INFO     | sum of square deviations: 1223016419.5
[2025-06-04 08:12:41] 2025-06-04 06:11:19,518 | INFO     | sum of deviations: -4234020461.5000057
[2025-06-04 08:12:41] 2025-06-04 06:11:19,518 | INFO     | mean x: 1749012333.5
[2025-06-04 08:12:41] 2025-06-04 06:11:19,518 | INFO     | mean y: 2342846.5126582277
[2025-06-04 08:12:41] 2025-06-04 06:11:19,519 | INFO     | -- intersect: 6057334332.630537
[2025-06-04 08:12:41] 2025-06-04 06:11:19,519 | INFO     | intersect: 6057334332.630537
[2025-06-04 08:12:41] 2025-06-04 06:11:19,519 | INFO     | chi2: 1.6820634266710877
[2025-06-04 08:12:41] 2025-06-04 06:11:19,519 | INFO     | current chi2=1.6820634266710877 (change=0.029373808127672367 %)
[2025-06-04 08:12:41] 2025-06-04 06:11:19,519 | INFO     | right removable region: 157
[2025-06-04 08:12:41] 2025-06-04 06:11:19,520 | INFO     | sum of square deviations: 1223016419.5
[2025-06-04 08:12:41] 2025-06-04 06:11:19,521 | INFO     | sum of deviations: -26471794422.999996
[2025-06-04 08:12:41] 2025-06-04 06:11:19,521 | INFO     | mean x: 1749012638.5
[2025-06-04 08:12:41] 2025-06-04 06:11:19,522 | INFO     | mean y: 2370012.088607595
[2025-06-04 08:12:41] 2025-06-04 06:11:19,523 | INFO     | -- intersect: 37859182293.095604
[2025-06-04 08:12:41] 2025-06-04 06:11:19,523 | INFO     | intersect: 37859182293.095604
[2025-06-04 08:12:41] 2025-06-04 06:11:19,523 | INFO     | chi2: 0.20925326383994391
[2025-06-04 08:12:41] 2025-06-04 06:11:19,523 | INFO     | current chi2=0.20925326383994391 (change=87.56338227972017 %)
[2025-06-04 08:12:41] 2025-06-04 06:11:19,523 | INFO     | sum of square deviations: 1110539892.0
[2025-06-04 08:12:41] 2025-06-04 06:11:19,524 | INFO     | sum of deviations: -19430807935.0
[2025-06-04 08:12:41] 2025-06-04 06:11:19,524 | INFO     | mean x: 1749012791.0
[2025-06-04 08:12:41] 2025-06-04 06:11:19,525 | INFO     | mean y: 2360437.065359477
[2025-06-04 08:12:41] 2025-06-04 06:11:19,525 | INFO     | -- intersect: 30604351290.8791
[2025-06-04 08:12:41] 2025-06-04 06:11:19,525 | INFO     | intersect: 30604351290.8791
[2025-06-04 08:12:41] 2025-06-04 06:11:19,525 | INFO     | chi2: 0.17358922162996704
[2025-06-04 08:12:41] 2025-06-04 06:11:19,525 | INFO     | current chi2=0.17358922162996704 (change=17.043481929751884 %)
[2025-06-04 08:12:41] 2025-06-04 06:11:19,525 | INFO     | left removable region: 20
[2025-06-04 08:12:41] 2025-06-04 06:11:19,526 | INFO     | sum of square deviations: 797291228.0
[2025-06-04 08:12:41] 2025-06-04 06:11:19,526 | INFO     | sum of deviations: -3717878935.0000005
[2025-06-04 08:12:41] 2025-06-04 06:11:19,526 | INFO     | mean x: 1749012913.0
[2025-06-04 08:12:41] 2025-06-04 06:11:19,527 | INFO     | mean y: 2337407.408759124
[2025-06-04 08:12:41] 2025-06-04 06:11:19,527 | INFO     | -- intersect: 8158225792.882993
[2025-06-04 08:12:41] 2025-06-04 06:11:19,527 | INFO     | intersect: 8158225792.882993
[2025-06-04 08:12:41] 2025-06-04 06:11:19,527 | INFO     | chi2: 0.02388338786854691
[2025-06-04 08:12:41] 2025-06-04 06:11:19,527 | INFO     | -- intersect: 8158225792.882993
[2025-06-04 08:12:41] 2025-06-04 06:11:19,527 | INFO     | current memory leak: -4.66 B/s (using 137 data points, chi2=0.02)
[2025-06-04 08:12:41] 2025-06-04 06:11:19,528 | INFO     | ..............................
[2025-06-04 08:12:41] 2025-06-04 06:11:19,528 | INFO     | . Timing measurements:
[2025-06-04 08:12:41] 2025-06-04 06:11:19,528 | INFO     | . get job = 0 s
[2025-06-04 08:12:41] 2025-06-04 06:11:19,528 | INFO     | . initial setup = 1 s
[2025-06-04 08:12:41] 2025-06-04 06:11:19,528 | INFO     | . payload setup = 7 s
[2025-06-04 08:12:41] 2025-06-04 06:11:19,528 | INFO     | . stage-in = 0 s
[2025-06-04 08:12:41] 2025-06-04 06:11:19,528 | INFO     | . payload execution = 9928 s
[2025-06-04 08:12:41] 2025-06-04 06:11:19,529 | INFO     | . stage-out = 0 s
[2025-06-04 08:12:41] 2025-06-04 06:11:19,529 | INFO     | . log creation = 0 s
[2025-06-04 08:12:41] 2025-06-04 06:11:19,529 | INFO     | ..............................
[2025-06-04 08:12:41] 2025-06-04 06:11:19,714 | INFO     | 
[2025-06-04 08:12:41] 2025-06-04 06:11:19,715 | INFO     | job summary report
[2025-06-04 08:12:41] 2025-06-04 06:11:19,715 | INFO     | --------------------------------------------------
[2025-06-04 08:12:41] 2025-06-04 06:11:19,715 | INFO     | PanDA job id: 6677397547
[2025-06-04 08:12:41] 2025-06-04 06:11:19,715 | INFO     | task id: 45006595
[2025-06-04 08:12:41] 2025-06-04 06:11:19,715 | INFO     | errors: (none)
[2025-06-04 08:12:41] 2025-06-04 06:11:19,715 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:12:41] 2025-06-04 06:11:19,715 | INFO     | pilot state: finished 
[2025-06-04 08:12:41] 2025-06-04 06:11:19,715 | INFO     | transexitcode: 0
[2025-06-04 08:12:41] 2025-06-04 06:11:19,715 | INFO     | exeerrorcode: 0
[2025-06-04 08:12:41] 2025-06-04 06:11:19,715 | INFO     | exeerrordiag: 
[2025-06-04 08:12:41] 2025-06-04 06:11:19,715 | INFO     | exitcode: 0
[2025-06-04 08:12:41] 2025-06-04 06:11:19,716 | INFO     | exitmsg: OK
[2025-06-04 08:12:41] 2025-06-04 06:11:19,716 | INFO     | cpuconsumptiontime: 37625 s
[2025-06-04 08:12:41] 2025-06-04 06:11:19,716 | INFO     | nevents: 400
[2025-06-04 08:12:41] 2025-06-04 06:11:19,716 | INFO     | neventsw: 0
[2025-06-04 08:12:41] 2025-06-04 06:11:19,716 | INFO     | pid: 135301
[2025-06-04 08:12:41] 2025-06-04 06:11:19,716 | INFO     | pgrp: 135301
[2025-06-04 08:12:41] 2025-06-04 06:11:19,716 | INFO     | corecount: 4
[2025-06-04 08:12:41] 2025-06-04 06:11:19,716 | INFO     | event service: False
[2025-06-04 08:12:41] 2025-06-04 06:11:19,716 | INFO     | sizes: {0: 2405193, 5: 2405399, 11: 2405455, 9940: 2433742, 9942: 2442761, 9949: 2442875}
[2025-06-04 08:12:41] 2025-06-04 06:11:19,716 | INFO     | --------------------------------------------------
[2025-06-04 08:12:41] 2025-06-04 06:11:19,716 | INFO     | 
[2025-06-04 08:12:41] 2025-06-04 06:11:19,717 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-06-04 08:12:41] 2025-06-04 06:11:19,737 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,737 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,737 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,738 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,738 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,738 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,738 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,738 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,738 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,738 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,738 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,738 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,739 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:12:41] 2025-06-04 06:11:19,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,739 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:12:41] 2025-06-04 06:11:19,739 | INFO     | job 6677397547 has completed (purged errors)
[2025-06-04 08:12:41] 2025-06-04 06:11:19,740 | INFO     | overall cleanup function is called
[2025-06-04 08:12:41] 2025-06-04 06:11:20,539 | INFO     | PID=128382 has CPU usage=14.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 08:12:41] 2025-06-04 06:11:20,540 | INFO     | .. there are 8 such processes running
[2025-06-04 08:12:41] 2025-06-04 06:11:20,747 | INFO     | --- collectZombieJob: --- 10, [135301]
[2025-06-04 08:12:41] 2025-06-04 06:11:20,748 | INFO     | zombie collector waiting for pid 135301
[2025-06-04 08:12:41] 2025-06-04 06:11:20,748 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:12:41] 2025-06-04 06:11:20,748 | INFO     | collected zombie processes
[2025-06-04 08:12:41] 2025-06-04 06:11:20,748 | INFO     | will attempt to kill all subprocesses of pid=135301
[2025-06-04 08:12:41] 2025-06-04 06:11:21,127 | INFO     | process IDs to be killed: [135301] (in reverse order)
[2025-06-04 08:12:41] 2025-06-04 06:11:21,248 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:12:41] 2025-06-04 06:11:21,248 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:12:41] 2025-06-04 06:11:21,263 | INFO     | did not find any defunct processes belonging to 135301
[2025-06-04 08:12:41] 2025-06-04 06:11:21,277 | INFO     | did not find any defunct processes belonging to 135301
[2025-06-04 08:12:41] 2025-06-04 06:11:21,277 | INFO     | ready for new job
[2025-06-04 08:12:41] 2025-06-04 06:11:21,278 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:12:41] 2025-06-04 06:11:21,279 | INFO     | **************************************
[2025-06-04 08:12:41] 2025-06-04 06:11:21,279 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:12:41] 2025-06-04 06:11:21,280 | INFO     | **************************************
[2025-06-04 08:12:41] 2025-06-04 06:11:21,280 | INFO     | 
[2025-06-04 08:12:41] 2025-06-04 06:11:21,283 | INFO     | architecture information:
[2025-06-04 08:12:41] 2025-06-04 06:11:21,284 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:12:41] 2025-06-04 06:11:21,299 | INFO     | cat /etc/os-release:
[2025-06-04 08:12:41] NAME="CentOS Linux"
[2025-06-04 08:12:41] VERSION="7 (Core)"
[2025-06-04 08:12:41] ID="centos"
[2025-06-04 08:12:41] ID_LIKE="rhel fedora"
[2025-06-04 08:12:41] VERSION_ID="7"
[2025-06-04 08:12:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:12:41] ANSI_COLOR="0;31"
[2025-06-04 08:12:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:12:41] HOME_URL="https://www.centos.org/"
[2025-06-04 08:12:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:12:41] 
[2025-06-04 08:12:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:12:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:12:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:12:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:12:41] 
[2025-06-04 08:12:41] 2025-06-04 06:11:21,299 | INFO     | **************************************
[2025-06-04 08:12:41] 2025-06-04 06:11:21,803 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-06-04 08:12:41] 2025-06-04 06:11:21,818 | INFO     | sufficient remaining disk space (642584150016 B)
[2025-06-04 08:12:41] 2025-06-04 06:11:21,819 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:12:41] 2025-06-04 06:11:21,819 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:12:41] 2025-06-04 06:11:21,819 | INFO     | update_server=False
[2025-06-04 08:12:41] 2025-06-04 06:11:21,819 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:12:41] 2025-06-04 06:11:21,820 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:12:41] 2025-06-04 06:11:21,820 | INFO     | aborting loop
[2025-06-04 08:12:41] 2025-06-04 06:11:22,152 | INFO     | all data control threads have been joined
[2025-06-04 08:12:41] 2025-06-04 06:11:22,545 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:12:41] 2025-06-04 06:11:22,545 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:12:41] 2025-06-04 06:11:22,545 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:12:41] 2025-06-04 06:11:22,825 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:12:41] 2025-06-04 06:11:22,825 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:12:41] 2025-06-04 06:11:22,900 | INFO     | all job control threads have been joined
[2025-06-04 08:12:41] 2025-06-04 06:11:22,939 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:12:41] 2025-06-04 06:11:22,940 | INFO     | all payload control threads have been joined
[2025-06-04 08:12:41] 2025-06-04 06:11:22,982 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:12:41] 2025-06-04 06:11:23,017 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:12:41] 2025-06-04 06:11:23,051 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:12:41] 2025-06-04 06:11:23,074 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:12:41] 2025-06-04 06:11:23,130 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:12:41] 2025-06-04 06:11:23,158 | INFO     | [data] control thread has finished
[2025-06-04 08:12:41] 2025-06-04 06:11:23,432 | INFO     | [job] validate thread has finished
[2025-06-04 08:12:41] 2025-06-04 06:11:23,639 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:12:41] 2025-06-04 06:11:23,905 | INFO     | [job] control thread has finished
[2025-06-04 08:12:41] 2025-06-04 06:11:23,945 | INFO     | [payload] control thread has finished
[2025-06-04 08:12:41] 2025-06-04 06:11:24,003 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:12:41] 2025-06-04 06:11:24,154 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:12:41] 2025-06-04 06:11:24,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:12:41] 2025-06-04 06:11:24,987 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:12:41] 2025-06-04 06:11:25,654 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:12:41] 2025-06-04 06:11:27,079 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:12:41] 2025-06-04 06:11:28,340 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22366652454720)>', '<ExcThread(monitor, started 22366409152256)>']
[2025-06-04 08:12:41] 2025-06-04 06:11:28,574 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:12:41] 2025-06-04 06:11:28,575 | INFO     | [monitor] control thread has ended
[2025-06-04 08:12:41] 2025-06-04 06:11:33,365 | INFO     | all workflow threads have been joined
[2025-06-04 08:12:41] 2025-06-04 06:11:33,366 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:12:41] 2025-06-04 06:11:33,366 | INFO     | traces error code: 0
[2025-06-04 08:12:41] 2025-06-04 06:11:33,366 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:12:41] 2025-06-04 06:11:33,532 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:12:41] 2025-06-04 06:11:33,535 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:12:41] 2025-06-04 06:11:33,538 [wrapper] pilotpid: 128382
[2025-06-04 08:12:41] 2025-06-04 06:11:33,541 [wrapper] Pilot exit status: 0
[2025-06-04 08:12:41] 2025-06-04 06:11:33,554 [wrapper] pandaids: 6677397547
[2025-06-04 08:12:41] 2025-06-04 06:11:33,632 [wrapper] cleanup supervisor_pilot  451670 128383
[2025-06-04 08:12:41] 2025-06-04 06:11:33,637 [wrapper] Test setup, not cleaning
[2025-06-04 08:12:41] 2025-06-04 06:11:33,640 [wrapper] apfmon messages muted
[2025-06-04 08:12:41] 2025-06-04 06:11:33,643 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:12:41] 2025-06-04 06:11:33,646 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:12:41]  *** Error codes and diagnostics ***
[2025-06-04 08:12:41]     "exeErrorCode": 0,
[2025-06-04 08:12:41]     "exeErrorDiag": "",
[2025-06-04 08:12:41]     "pilotErrorCode": 0,
[2025-06-04 08:12:41]     "pilotErrorDiag": "",
[2025-06-04 08:12:41]  *** Listing of results directory ***
[2025-06-04 08:12:41] total 389556
[2025-06-04 08:12:41] -rw-r--r-- 1 boinc boinc    495897 Jun  2 21:34 pilot3.tar.gz
[2025-06-04 08:12:41] -rw-r--r-- 1 boinc boinc      5111 Jun  2 22:00 queuedata.json
[2025-06-04 08:12:41] -rwx------ 1 boinc boinc     37140 Jun  2 22:01 runpilot2-wrapper.sh
[2025-06-04 08:12:41] -rw-r--r-- 1 boinc boinc       100 Jun  4 05:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:12:41] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 05:24 run_atlas
[2025-06-04 08:12:41] -rw-r--r-- 1 boinc boinc       105 Jun  4 05:24 job.xml
[2025-06-04 08:12:41] -rw-r--r-- 1 boinc boinc      6636 Jun  4 05:25 init_data.xml
[2025-06-04 08:12:41] -rw-r--r-- 2 boinc boinc 218552927 Jun  4 05:25 EVNT.45006593._000416.pool.root.1
[2025-06-04 08:12:41] -rw-r--r-- 2 boinc boinc     15093 Jun  4 05:25 start_atlas.sh
[2025-06-04 08:12:41] drwxrwx--x 2 boinc boinc      4096 Jun  4 05:25 shared
[2025-06-04 08:12:41] -rw-r--r-- 2 boinc boinc    508878 Jun  4 05:25 input.tar.gz
[2025-06-04 08:12:41] -rw-r--r-- 1 boinc boinc         0 Jun  4 05:25 boinc_lockfile
[2025-06-04 08:12:41] -rw-r--r-- 1 boinc boinc      2524 Jun  4 05:25 pandaJob.out
[2025-06-04 08:12:41] -rw------- 1 boinc boinc    986077 Jun  4 05:25 agis_schedconf.cvmfs.json
[2025-06-04 08:12:41] -rw------- 1 boinc boinc   1603667 Jun  4 05:25 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:12:41] drwx------ 4 boinc boinc      4096 Jun  4 05:25 pilot3
[2025-06-04 08:12:41] -rw------- 1 boinc boinc        95 Jun  4 08:10 pilot_heartbeat.json
[2025-06-04 08:12:41] -rw------- 1 boinc boinc 174079286 Jun  4 08:10 HITS.45006595._010384.pool.root.1
[2025-06-04 08:12:41] -rw-r--r-- 1 boinc boinc       528 Jun  4 08:10 boinc_task_state.xml
[2025-06-04 08:12:41] -rw------- 1 boinc boinc      1036 Jun  4 08:11 memory_monitor_summary.json
[2025-06-04 08:12:41] -rw------- 1 boinc boinc    288581 Jun  4 08:11 log.45006595._010384.job.log.tgz.1
[2025-06-04 08:12:41] -rw------- 1 boinc boinc      7722 Jun  4 08:11 heartbeat.json
[2025-06-04 08:12:41] -rw------- 1 boinc boinc      4363 Jun  4 08:11 pilotlog.txt
[2025-06-04 08:12:41] -rw------- 1 boinc boinc    928020 Jun  4 08:11 log.45006595._010384.job.log.1
[2025-06-04 08:12:41] -rw------- 1 boinc boinc       357 Jun  4 08:11 output.list
[2025-06-04 08:12:41] -rw-r--r-- 1 boinc boinc       620 Jun  4 08:11 runtime_log
[2025-06-04 08:12:41] -rw------- 1 boinc boinc   1239040 Jun  4 08:11 result.tar.gz
[2025-06-04 08:12:41] -rw-r--r-- 1 boinc boinc      9025 Jun  4 08:11 runtime_log.err
[2025-06-04 08:12:41] -rw------- 1 boinc boinc       663 Jun  4 08:11 qMFKDm6WQg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFTgKDm71GBrn.diag
[2025-06-04 08:12:41] -rw-r--r-- 1 boinc boinc      8192 Jun  4 08:12 boinc_mmap_file
[2025-06-04 08:12:41] -rw-r--r-- 1 boinc boinc     20978 Jun  4 08:12 stderr.txt
[2025-06-04 08:12:41] -rw-r--r-- 1 boinc boinc        26 Jun  4 08:12 wrapper_checkpoint.txt
[2025-06-04 08:12:41] HITS file was successfully produced:
[2025-06-04 08:12:41] -rw------- 1 boinc boinc 174079286 Jun  4 08:10 shared/HITS.pool.root.1
[2025-06-04 08:12:41]  *** Contents of shared directory: ***
[2025-06-04 08:12:41] total 385168
[2025-06-04 08:12:41] -rw-r--r-- 2 boinc boinc 218552927 Jun  4 05:25 ATLAS.root_0
[2025-06-04 08:12:41] -rw-r--r-- 2 boinc boinc     15093 Jun  4 05:25 start_atlas.sh
[2025-06-04 08:12:41] -rw-r--r-- 2 boinc boinc    508878 Jun  4 05:25 input.tar.gz
[2025-06-04 08:12:41] -rw------- 1 boinc boinc 174079286 Jun  4 08:10 HITS.pool.root.1
[2025-06-04 08:12:41] -rw------- 1 boinc boinc   1239040 Jun  4 08:11 result.tar.gz
08:12:43 (124721): run_atlas exited; CPU time 37972.769637
08:12:43 (124721): called boinc_finish(0)

</stderr_txt>
]]>

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