Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:12:52 (454401): wrapper (7.7.26015): starting
08:12:52 (454401): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 08:12:52] Arguments: --nthreads 4
[2025-06-04 08:12:52] Threads: 4
[2025-06-04 08:12:52] Checking for CVMFS
[2025-06-04 08:12:52] No cvmfs_config command found, will try listing directly
[2025-06-04 08:12:52] CVMFS is ok
[2025-06-04 08:12:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:12:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:12:52] Further information can be found at the LHC@home message board.
[2025-06-04 08:12:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:12:52] Checking for apptainer binary...
[2025-06-04 08:12:52] which: no apptainer in ((null))
[2025-06-04 08:12:52] apptainer is not installed, using version from CVMFS
[2025-06-04 08:12:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:12:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-06-04 08:12:53] apptainer works
[2025-06-04 08:12:53] Set ATHENA_PROC_NUMBER=4
[2025-06-04 08:12:53] Set ATHENA_CORE_NUMBER=4
[2025-06-04 08:12:53] Starting ATLAS job with PandaID=6677398043
[2025-06-04 08:12:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:11:23]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:11:23] 2025-06-04 09:05:55,046 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:11:23] 2025-06-04 09:05:55,046 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6677398043/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:11:23] 2025-06-04 09:05:55,047 | INFO     | extracted standard info from prmon json
[2025-06-04 11:11:23] 2025-06-04 09:05:55,047 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:11:23] 2025-06-04 09:05:55,047 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:11:23] 2025-06-04 09:05:55,047 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:11:23] 2025-06-04 09:05:55,047 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:11:23] 2025-06-04 09:05:55,051 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:11:23] 2025-06-04 09:05:55,051 | INFO     | sum of square deviations: 1523386702.5
[2025-06-04 11:11:23] 2025-06-04 09:05:55,052 | INFO     | sum of deviations: -24886866559.0
[2025-06-04 11:11:23] 2025-06-04 09:05:55,052 | INFO     | mean x: 1749022771.5
[2025-06-04 11:11:23] 2025-06-04 09:05:55,052 | INFO     | mean y: 2345748.6705882354
[2025-06-04 11:11:23] 2025-06-04 09:05:55,052 | INFO     | -- intersect: 28575324790.394142
[2025-06-04 11:11:23] 2025-06-04 09:05:55,053 | INFO     | intersect: 28575324790.394142
[2025-06-04 11:11:23] 2025-06-04 09:05:55,053 | INFO     | chi2: 2.5374400633573866
[2025-06-04 11:11:23] 2025-06-04 09:05:55,053 | INFO     | sum of square deviations: 1392881930.0
[2025-06-04 11:11:23] 2025-06-04 09:05:55,054 | INFO     | sum of deviations: -14461829431.0
[2025-06-04 11:11:23] 2025-06-04 09:05:55,054 | INFO     | mean x: 1749022619.0
[2025-06-04 11:11:23] 2025-06-04 09:05:55,054 | INFO     | mean y: 2357659.4727272727
[2025-06-04 11:11:23] 2025-06-04 09:05:55,054 | INFO     | -- intersect: 18161877315.91547
[2025-06-04 11:11:23] 2025-06-04 09:05:55,054 | INFO     | intersect: 18161877315.91547
[2025-06-04 11:11:23] 2025-06-04 09:05:55,055 | INFO     | chi2: 1.879727605388529
[2025-06-04 11:11:23] 2025-06-04 09:05:55,055 | INFO     | current chi2=1.879727605388529 (change=25.920315024056663 %)
[2025-06-04 11:11:23] 2025-06-04 09:05:55,055 | INFO     | sum of square deviations: 1270051720.0
[2025-06-04 11:11:23] 2025-06-04 09:05:55,056 | INFO     | sum of deviations: -13969920398.500002
[2025-06-04 11:11:23] 2025-06-04 09:05:55,056 | INFO     | mean x: 1749022466.5
[2025-06-04 11:11:23] 2025-06-04 09:05:55,056 | INFO     | mean y: 2358270.43125
[2025-06-04 11:11:23] 2025-06-04 09:05:55,056 | INFO     | -- intersect: 19240712305.488293
[2025-06-04 11:11:23] 2025-06-04 09:05:55,056 | INFO     | intersect: 19240712305.488293
[2025-06-04 11:11:23] 2025-06-04 09:05:55,056 | INFO     | chi2: 1.8759017294979323
[2025-06-04 11:11:23] 2025-06-04 09:05:55,057 | INFO     | current chi2=1.8759017294979323 (change=0.20353352685938236 %)
[2025-06-04 11:11:23] 2025-06-04 09:05:55,057 | INFO     | right removable region: 159
[2025-06-04 11:11:23] 2025-06-04 09:05:55,057 | INFO     | sum of square deviations: 1392881930.0
[2025-06-04 11:11:23] 2025-06-04 09:05:55,058 | INFO     | sum of deviations: -48872476295.99999
[2025-06-04 11:11:23] 2025-06-04 09:05:55,058 | INFO     | mean x: 1749022924.0
[2025-06-04 11:11:23] 2025-06-04 09:05:55,058 | INFO     | mean y: 2373383.381818182
[2025-06-04 11:11:23] 2025-06-04 09:05:55,058 | INFO     | -- intersect: 61370878174.27289
[2025-06-04 11:11:23] 2025-06-04 09:05:55,058 | INFO     | intersect: 61370878174.27289
[2025-06-04 11:11:23] 2025-06-04 09:05:55,059 | INFO     | chi2: 1.0278035519382802
[2025-06-04 11:11:23] 2025-06-04 09:05:55,059 | INFO     | current chi2=1.0278035519382802 (change=59.494469769727175 %)
[2025-06-04 11:11:23] 2025-06-04 09:05:55,059 | INFO     | sum of square deviations: 1270051720.0
[2025-06-04 11:11:23] 2025-06-04 09:05:55,060 | INFO     | sum of deviations: -43077679487.0
[2025-06-04 11:11:23] 2025-06-04 09:05:55,060 | INFO     | mean x: 1749023076.5
[2025-06-04 11:11:23] 2025-06-04 09:05:55,060 | INFO     | mean y: 2366157.1125
[2025-06-04 11:11:23] 2025-06-04 09:05:55,060 | INFO     | -- intersect: 59325820720.705925
[2025-06-04 11:11:23] 2025-06-04 09:05:55,060 | INFO     | intersect: 59325820720.705925
[2025-06-04 11:11:23] 2025-06-04 09:05:55,060 | INFO     | chi2: 1.0195497726997542
[2025-06-04 11:11:23] 2025-06-04 09:05:55,061 | INFO     | current chi2=1.0195497726997542 (change=0.8030502738544374 %)
[2025-06-04 11:11:23] 2025-06-04 09:05:55,061 | INFO     | left removable region: 20
[2025-06-04 11:11:23] 2025-06-04 09:05:55,061 | INFO     | sum of square deviations: 832722590.0
[2025-06-04 11:11:23] 2025-06-04 09:05:55,062 | INFO     | sum of deviations: -16699670368.0
[2025-06-04 11:11:23] 2025-06-04 09:05:55,062 | INFO     | mean x: 1749023046.0
[2025-06-04 11:11:23] 2025-06-04 09:05:55,062 | INFO     | mean y: 2357568.892086331
[2025-06-04 11:11:23] 2025-06-04 09:05:55,062 | INFO     | -- intersect: 35077794076.7876
[2025-06-04 11:11:23] 2025-06-04 09:05:55,062 | INFO     | intersect: 35077794076.7876
[2025-06-04 11:11:23] 2025-06-04 09:05:55,062 | INFO     | chi2: 0.24452327774321359
[2025-06-04 11:11:23] 2025-06-04 09:05:55,062 | INFO     | -- intersect: 35077794076.7876
[2025-06-04 11:11:23] 2025-06-04 09:05:55,063 | INFO     | current memory leak: -20.05 B/s (using 139 data points, chi2=0.24)
[2025-06-04 11:11:23] 2025-06-04 09:05:55,063 | INFO     | ..............................
[2025-06-04 11:11:23] 2025-06-04 09:05:55,063 | INFO     | . Timing measurements:
[2025-06-04 11:11:23] 2025-06-04 09:05:55,063 | INFO     | . get job = 0 s
[2025-06-04 11:11:23] 2025-06-04 09:05:55,063 | INFO     | . initial setup = 1 s
[2025-06-04 11:11:23] 2025-06-04 09:05:55,064 | INFO     | . payload setup = 8 s
[2025-06-04 11:11:23] 2025-06-04 09:05:55,064 | INFO     | . stage-in = 0 s
[2025-06-04 11:11:23] 2025-06-04 09:05:55,064 | INFO     | . payload execution = 10330 s
[2025-06-04 11:11:23] 2025-06-04 09:05:55,064 | INFO     | . stage-out = 0 s
[2025-06-04 11:11:23] 2025-06-04 09:05:55,064 | INFO     | . log creation = 0 s
[2025-06-04 11:11:23] 2025-06-04 09:05:55,064 | INFO     | ..............................
[2025-06-04 11:11:23] 2025-06-04 09:05:55,272 | INFO     | 
[2025-06-04 11:11:23] 2025-06-04 09:05:55,273 | INFO     | job summary report
[2025-06-04 11:11:23] 2025-06-04 09:05:55,273 | INFO     | --------------------------------------------------
[2025-06-04 11:11:23] 2025-06-04 09:05:55,273 | INFO     | PanDA job id: 6677398043
[2025-06-04 11:11:23] 2025-06-04 09:05:55,273 | INFO     | task id: 45006595
[2025-06-04 11:11:23] 2025-06-04 09:05:55,273 | INFO     | errors: (none)
[2025-06-04 11:11:23] 2025-06-04 09:05:55,273 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:11:23] 2025-06-04 09:05:55,273 | INFO     | pilot state: finished 
[2025-06-04 11:11:23] 2025-06-04 09:05:55,273 | INFO     | transexitcode: 0
[2025-06-04 11:11:23] 2025-06-04 09:05:55,273 | INFO     | exeerrorcode: 0
[2025-06-04 11:11:23] 2025-06-04 09:05:55,273 | INFO     | exeerrordiag: 
[2025-06-04 11:11:23] 2025-06-04 09:05:55,274 | INFO     | exitcode: 0
[2025-06-04 11:11:23] 2025-06-04 09:05:55,274 | INFO     | exitmsg: OK
[2025-06-04 11:11:23] 2025-06-04 09:05:55,274 | INFO     | cpuconsumptiontime: 38775 s
[2025-06-04 11:11:23] 2025-06-04 09:05:55,274 | INFO     | nevents: 400
[2025-06-04 11:11:23] 2025-06-04 09:05:55,274 | INFO     | neventsw: 0
[2025-06-04 11:11:23] 2025-06-04 09:05:55,274 | INFO     | pid: 465405
[2025-06-04 11:11:23] 2025-06-04 09:05:55,274 | INFO     | pgrp: 465405
[2025-06-04 11:11:23] 2025-06-04 09:05:55,274 | INFO     | corecount: 4
[2025-06-04 11:11:23] 2025-06-04 09:05:55,274 | INFO     | event service: False
[2025-06-04 11:11:23] 2025-06-04 09:05:55,274 | INFO     | sizes: {0: 2405022, 1: 2405221, 2: 2405221, 6: 2405455, 12: 2405483, 10342: 2434066, 10343: 2443029, 10344: 2443085, 10352: 2443255}
[2025-06-04 11:11:23] 2025-06-04 09:05:55,274 | INFO     | --------------------------------------------------
[2025-06-04 11:11:23] 2025-06-04 09:05:55,274 | INFO     | 
[2025-06-04 11:11:23] 2025-06-04 09:05:55,275 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-06-04 11:11:23] 2025-06-04 09:05:55,295 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,295 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,295 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,295 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,295 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,296 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,296 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,296 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,296 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,296 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,296 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,296 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,296 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,296 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,296 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,296 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,297 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,297 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:11:23] 2025-06-04 09:05:55,297 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,297 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:11:23] 2025-06-04 09:05:55,297 | INFO     | job 6677398043 has completed (purged errors)
[2025-06-04 11:11:23] 2025-06-04 09:05:55,297 | INFO     | overall cleanup function is called
[2025-06-04 11:11:23] 2025-06-04 09:05:56,305 | INFO     | --- collectZombieJob: --- 10, [465405]
[2025-06-04 11:11:23] 2025-06-04 09:05:56,306 | INFO     | zombie collector waiting for pid 465405
[2025-06-04 11:11:23] 2025-06-04 09:05:56,306 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:11:23] 2025-06-04 09:05:56,306 | INFO     | collected zombie processes
[2025-06-04 11:11:23] 2025-06-04 09:05:56,306 | INFO     | will attempt to kill all subprocesses of pid=465405
[2025-06-04 11:11:23] 2025-06-04 09:05:56,670 | INFO     | process IDs to be killed: [465405] (in reverse order)
[2025-06-04 11:11:23] 2025-06-04 09:05:56,778 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:11:23] 2025-06-04 09:05:56,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:11:23] 2025-06-04 09:05:56,790 | INFO     | did not find any defunct processes belonging to 465405
[2025-06-04 11:11:23] 2025-06-04 09:05:56,802 | INFO     | did not find any defunct processes belonging to 465405
[2025-06-04 11:11:23] 2025-06-04 09:05:56,803 | INFO     | ready for new job
[2025-06-04 11:11:23] 2025-06-04 09:05:56,803 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:11:23] 2025-06-04 09:05:56,804 | INFO     | **************************************
[2025-06-04 11:11:23] 2025-06-04 09:05:56,805 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:11:23] 2025-06-04 09:05:56,805 | INFO     | **************************************
[2025-06-04 11:11:23] 2025-06-04 09:05:56,805 | INFO     | 
[2025-06-04 11:11:23] 2025-06-04 09:05:56,808 | INFO     | architecture information:
[2025-06-04 11:11:23] 2025-06-04 09:05:56,809 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:11:23] 2025-06-04 09:05:56,822 | INFO     | cat /etc/os-release:
[2025-06-04 11:11:23] NAME="CentOS Linux"
[2025-06-04 11:11:23] VERSION="7 (Core)"
[2025-06-04 11:11:23] ID="centos"
[2025-06-04 11:11:23] ID_LIKE="rhel fedora"
[2025-06-04 11:11:23] VERSION_ID="7"
[2025-06-04 11:11:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:11:23] ANSI_COLOR="0;31"
[2025-06-04 11:11:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:11:23] HOME_URL="https://www.centos.org/"
[2025-06-04 11:11:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:11:23] 
[2025-06-04 11:11:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:11:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:11:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:11:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:11:23] 
[2025-06-04 11:11:23] 2025-06-04 09:05:56,823 | INFO     | **************************************
[2025-06-04 11:11:23] 2025-06-04 09:05:57,326 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-06-04 11:11:23] 2025-06-04 09:05:57,343 | INFO     | sufficient remaining disk space (645136384000 B)
[2025-06-04 11:11:23] 2025-06-04 09:05:57,343 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:11:23] 2025-06-04 09:05:57,344 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:11:23] 2025-06-04 09:05:57,344 | INFO     | update_server=False
[2025-06-04 11:11:23] 2025-06-04 09:05:57,344 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:11:23] 2025-06-04 09:05:57,344 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:11:23] 2025-06-04 09:05:57,361 | INFO     | all data control threads have been joined
[2025-06-04 11:11:23] 2025-06-04 09:05:57,554 | INFO     | all payload control threads have been joined
[2025-06-04 11:11:23] 2025-06-04 09:05:57,744 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:11:23] 2025-06-04 09:05:58,218 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:11:23] 2025-06-04 09:05:58,219 | INFO     | aborting loop
[2025-06-04 11:11:23] 2025-06-04 09:05:58,231 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:11:23] 2025-06-04 09:05:58,231 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:11:23] 2025-06-04 09:05:58,231 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:11:23] 2025-06-04 09:05:58,349 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:11:23] 2025-06-04 09:05:58,367 | INFO     | [data] control thread has finished
[2025-06-04 11:11:23] 2025-06-04 09:05:58,458 | INFO     | all job control threads have been joined
[2025-06-04 11:11:23] 2025-06-04 09:05:58,560 | INFO     | [payload] control thread has finished
[2025-06-04 11:11:23] 2025-06-04 09:05:58,571 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:11:23] 2025-06-04 09:05:58,685 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:11:23] 2025-06-04 09:05:59,082 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:11:23] 2025-06-04 09:05:59,162 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:11:23] 2025-06-04 09:05:59,187 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:11:23] 2025-06-04 09:05:59,224 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:11:23] 2025-06-04 09:05:59,349 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:11:23] 2025-06-04 09:05:59,463 | INFO     | [job] control thread has finished
[2025-06-04 11:11:23] 2025-06-04 09:05:59,580 | INFO     | [job] validate thread has finished
[2025-06-04 11:11:23] 2025-06-04 09:05:59,722 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:11:23] 2025-06-04 09:05:59,737 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:11:23] 2025-06-04 09:06:00,170 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:11:23] 2025-06-04 09:06:01,175 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:11:23] 2025-06-04 09:06:01,749 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:11:23] 2025-06-04 09:06:02,837 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22875825882944)>', '<ExcThread(monitor, started 22875515877120)>']
[2025-06-04 11:11:23] 2025-06-04 09:06:03,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:11:23] 2025-06-04 09:06:03,256 | INFO     | [monitor] control thread has ended
[2025-06-04 11:11:23] 2025-06-04 09:06:07,862 | INFO     | all workflow threads have been joined
[2025-06-04 11:11:23] 2025-06-04 09:06:07,863 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:11:23] 2025-06-04 09:06:07,864 | INFO     | traces error code: 0
[2025-06-04 11:11:23] 2025-06-04 09:06:07,864 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:11:23] 2025-06-04 09:06:08,010 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:11:23] 2025-06-04 09:06:08,013 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:11:23] 2025-06-04 09:06:08,015 [wrapper] pilotpid: 458205
[2025-06-04 11:11:23] 2025-06-04 09:06:08,018 [wrapper] Pilot exit status: 0
[2025-06-04 11:11:23] 2025-06-04 09:06:08,031 [wrapper] pandaids: 6677398043
[2025-06-04 11:11:23] 2025-06-04 09:06:08,105 [wrapper] cleanup supervisor_pilot  752229 458206
[2025-06-04 11:11:23] 2025-06-04 09:06:08,108 [wrapper] Test setup, not cleaning
[2025-06-04 11:11:23] 2025-06-04 09:06:08,111 [wrapper] apfmon messages muted
[2025-06-04 11:11:23] 2025-06-04 09:06:08,114 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:11:23] 2025-06-04 09:06:08,117 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:11:23]  *** Error codes and diagnostics ***
[2025-06-04 11:11:23]     "exeErrorCode": 0,
[2025-06-04 11:11:23]     "exeErrorDiag": "",
[2025-06-04 11:11:23]     "pilotErrorCode": 0,
[2025-06-04 11:11:23]     "pilotErrorDiag": "",
[2025-06-04 11:11:23]  *** Listing of results directory ***
[2025-06-04 11:11:23] total 396656
[2025-06-04 11:11:23] -rw-r--r-- 1 boinc boinc    495897 Jun  2 21:34 pilot3.tar.gz
[2025-06-04 11:11:23] -rw-r--r-- 1 boinc boinc      5111 Jun  2 22:00 queuedata.json
[2025-06-04 11:11:23] -rwx------ 1 boinc boinc     37140 Jun  2 22:02 runpilot2-wrapper.sh
[2025-06-04 11:11:23] -rw-r--r-- 1 boinc boinc       100 Jun  4 08:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:11:23] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 08:12 run_atlas
[2025-06-04 11:11:23] -rw-r--r-- 1 boinc boinc       105 Jun  4 08:12 job.xml
[2025-06-04 11:11:23] -rw-r--r-- 1 boinc boinc      6636 Jun  4 08:12 init_data.xml
[2025-06-04 11:11:23] -rw-r--r-- 2 boinc boinc 217444385 Jun  4 08:12 EVNT.45006593._000424.pool.root.1
[2025-06-04 11:11:23] -rw-r--r-- 2 boinc boinc     15093 Jun  4 08:12 start_atlas.sh
[2025-06-04 11:11:23] drwxrwx--x 2 boinc boinc      4096 Jun  4 08:12 shared
[2025-06-04 11:11:23] -rw-r--r-- 2 boinc boinc    508879 Jun  4 08:12 input.tar.gz
[2025-06-04 11:11:23] -rw-r--r-- 1 boinc boinc         0 Jun  4 08:12 boinc_lockfile
[2025-06-04 11:11:23] -rw-r--r-- 1 boinc boinc      2524 Jun  4 08:12 pandaJob.out
[2025-06-04 11:11:23] -rw------- 1 boinc boinc    986745 Jun  4 08:13 agis_schedconf.cvmfs.json
[2025-06-04 11:11:23] -rw------- 1 boinc boinc   1603667 Jun  4 08:13 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:11:23] drwx------ 4 boinc boinc      4096 Jun  4 08:13 pilot3
[2025-06-04 11:11:23] -rw------- 1 boinc boinc 182326044 Jun  4 11:05 HITS.45006595._010602.pool.root.1
[2025-06-04 11:11:23] -rw-r--r-- 1 boinc boinc       528 Jun  4 11:05 boinc_task_state.xml
[2025-06-04 11:11:23] -rw------- 1 boinc boinc        95 Jun  4 11:05 pilot_heartbeat.json
[2025-06-04 11:11:23] -rw------- 1 boinc boinc      1035 Jun  4 11:05 memory_monitor_summary.json
[2025-06-04 11:11:23] -rw------- 1 boinc boinc    316495 Jun  4 11:05 log.45006595._010602.job.log.tgz.1
[2025-06-04 11:11:23] -rw------- 1 boinc boinc      7727 Jun  4 11:05 heartbeat.json
[2025-06-04 11:11:23] -rw------- 1 boinc boinc      4363 Jun  4 11:06 pilotlog.txt
[2025-06-04 11:11:23] -rw------- 1 boinc boinc    966298 Jun  4 11:06 log.45006595._010602.job.log.1
[2025-06-04 11:11:23] -rw------- 1 boinc boinc       357 Jun  4 11:06 output.list
[2025-06-04 11:11:23] -rw-r--r-- 1 boinc boinc       620 Jun  4 11:06 runtime_log
[2025-06-04 11:11:23] -rw------- 1 boinc boinc   1300480 Jun  4 11:06 result.tar.gz
[2025-06-04 11:11:23] -rw-r--r-- 1 boinc boinc      9026 Jun  4 11:06 runtime_log.err
[2025-06-04 11:11:23] -rw------- 1 boinc boinc       666 Jun  4 11:06 PfcNDm7XQg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgTgKDm7kWJ1m.diag
[2025-06-04 11:11:23] -rw-r--r-- 1 boinc boinc        26 Jun  4 11:11 wrapper_checkpoint.txt
[2025-06-04 11:11:23] -rw-r--r-- 1 boinc boinc      8192 Jun  4 11:11 boinc_mmap_file
[2025-06-04 11:11:23] -rw-r--r-- 1 boinc boinc     20586 Jun  4 11:11 stderr.txt
[2025-06-04 11:11:23] HITS file was successfully produced:
[2025-06-04 11:11:23] -rw------- 1 boinc boinc 182326044 Jun  4 11:05 shared/HITS.pool.root.1
[2025-06-04 11:11:23]  *** Contents of shared directory: ***
[2025-06-04 11:11:23] total 392204
[2025-06-04 11:11:23] -rw-r--r-- 2 boinc boinc 217444385 Jun  4 08:12 ATLAS.root_0
[2025-06-04 11:11:23] -rw-r--r-- 2 boinc boinc     15093 Jun  4 08:12 start_atlas.sh
[2025-06-04 11:11:23] -rw-r--r-- 2 boinc boinc    508879 Jun  4 08:12 input.tar.gz
[2025-06-04 11:11:23] -rw------- 1 boinc boinc 182326044 Jun  4 11:05 HITS.pool.root.1
[2025-06-04 11:11:23] -rw------- 1 boinc boinc   1300480 Jun  4 11:06 result.tar.gz
11:11:25 (454401): run_atlas exited; CPU time 39136.792773
11:11:25 (454401): called boinc_finish(0)

</stderr_txt>
]]>

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