Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:06:13 (29287): wrapper (7.7.26015): starting
07:06:13 (29287): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 07:06:13] Arguments: --nthreads 8
[2025-06-03 07:06:13] Threads: 8
[2025-06-03 07:06:13] Checking for CVMFS
[2025-06-03 07:06:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 07:06:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 07:06:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 07:06:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 07:06:15] 2.11.2.0 22848 31452 101288 146729 1 60 17158735 25165825 4633 130560 0 16588624 99.830 17144460 2498 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 07:06:15] CVMFS is ok
[2025-06-03 07:06:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 07:06:15] Checking for apptainer binary...
[2025-06-03 07:06:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 07:06:15] Running /usr/bin/apptainer --version
[2025-06-03 07:06:15] apptainer version 1.3.2-1.el7
[2025-06-03 07:06:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 07:06:20] cg-vwn482.simple-grid.lan
[2025-06-03 07:06:20] apptainer works
[2025-06-03 07:06:20] Set ATHENA_PROC_NUMBER=8
[2025-06-03 07:06:20] Set ATHENA_CORE_NUMBER=8
[2025-06-03 07:06:20] Starting ATLAS job with PandaID=6677396914
[2025-06-03 07:06:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 10:52:05]  *** The last 200 lines of the pilot log: ***
[2025-06-03 10:52:05] 2025-06-03 08:42:40,346 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 10:52:05] 2025-06-03 08:42:40,346 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 10:52:05] 2025-06-03 08:42:40,351 | INFO     | fitting pss+swap vs Time
[2025-06-03 10:52:05] 2025-06-03 08:42:40,352 | INFO     | sum of square deviations: 2518000700.0
[2025-06-03 10:52:05] 2025-06-03 08:42:40,353 | INFO     | sum of deviations: 53612210455.99999
[2025-06-03 10:52:05] 2025-06-03 08:42:40,354 | INFO     | mean x: 1748933948.0
[2025-06-03 10:52:05] 2025-06-03 08:42:40,354 | INFO     | mean y: 2448850.8358208956
[2025-06-03 10:52:05] 2025-06-03 08:42:40,354 | INFO     | -- intersect: -37235116211.723114
[2025-06-03 10:52:05] 2025-06-03 08:42:40,354 | INFO     | intersect: -37235116211.723114
[2025-06-03 10:52:05] 2025-06-03 08:42:40,354 | INFO     | chi2: 8.775652683861729
[2025-06-03 10:52:05] 2025-06-03 08:42:40,355 | INFO     | sum of square deviations: 2334722845.0
[2025-06-03 10:52:05] 2025-06-03 08:42:40,356 | INFO     | sum of deviations: 65875728169.999985
[2025-06-03 10:52:05] 2025-06-03 08:42:40,356 | INFO     | mean x: 1748933795.5
[2025-06-03 10:52:05] 2025-06-03 08:42:40,356 | INFO     | mean y: 2458833.6938775512
[2025-06-03 10:52:05] 2025-06-03 08:42:40,356 | INFO     | -- intersect: -49344849154.67008
[2025-06-03 10:52:05] 2025-06-03 08:42:40,356 | INFO     | intersect: -49344849154.67008
[2025-06-03 10:52:05] 2025-06-03 08:42:40,357 | INFO     | chi2: 8.10714819171412
[2025-06-03 10:52:05] 2025-06-03 08:42:40,357 | INFO     | current chi2=8.10714819171412 (change=7.6177182054729276 %)
[2025-06-03 10:52:05] 2025-06-03 08:42:40,357 | INFO     | right removable region: 195
[2025-06-03 10:52:05] 2025-06-03 08:42:40,357 | INFO     | sum of square deviations: 2334722845.0
[2025-06-03 10:52:05] 2025-06-03 08:42:40,359 | INFO     | sum of deviations: -18206917385.499996
[2025-06-03 10:52:05] 2025-06-03 08:42:40,359 | INFO     | mean x: 1748934100.5
[2025-06-03 10:52:05] 2025-06-03 08:42:40,359 | INFO     | mean y: 2508579.025510204
[2025-06-03 10:52:05] 2025-06-03 08:42:40,359 | INFO     | -- intersect: 13641257498.915936
[2025-06-03 10:52:05] 2025-06-03 08:42:40,359 | INFO     | intersect: 13641257498.915936
[2025-06-03 10:52:05] 2025-06-03 08:42:40,359 | INFO     | chi2: 3.3547034087203325
[2025-06-03 10:52:05] 2025-06-03 08:42:40,360 | INFO     | current chi2=3.3547034087203325 (change=61.77260507483878 %)
[2025-06-03 10:52:05] 2025-06-03 08:42:40,360 | INFO     | sum of square deviations: 2160561440.0
[2025-06-03 10:52:05] 2025-06-03 08:42:40,361 | INFO     | sum of deviations: -63990191879.0
[2025-06-03 10:52:05] 2025-06-03 08:42:40,361 | INFO     | mean x: 1748934253.0
[2025-06-03 10:52:05] 2025-06-03 08:42:40,361 | INFO     | mean y: 2548484.1884816755
[2025-06-03 10:52:05] 2025-06-03 08:42:40,362 | INFO     | -- intersect: 51801417223.244354
[2025-06-03 10:52:05] 2025-06-03 08:42:40,362 | INFO     | intersect: 51801417223.244354
[2025-06-03 10:52:05] 2025-06-03 08:42:40,362 | INFO     | chi2: 1.0596948545079754
[2025-06-03 10:52:05] 2025-06-03 08:42:40,362 | INFO     | current chi2=1.0596948545079754 (change=68.41166787640994 %)
[2025-06-03 10:52:05] 2025-06-03 08:42:40,362 | INFO     | sum of square deviations: 1995283922.5
[2025-06-03 10:52:05] 2025-06-03 08:42:40,364 | INFO     | sum of deviations: -67496055249.00001
[2025-06-03 10:52:05] 2025-06-03 08:42:40,364 | INFO     | mean x: 1748934405.5
[2025-06-03 10:52:05] 2025-06-03 08:42:40,364 | INFO     | mean y: 2551641.430107527
[2025-06-03 10:52:05] 2025-06-03 08:42:40,364 | INFO     | -- intersect: 59165145961.64019
[2025-06-03 10:52:05] 2025-06-03 08:42:40,364 | INFO     | intersect: 59165145961.64019
[2025-06-03 10:52:05] 2025-06-03 08:42:40,364 | INFO     | chi2: 0.9812255319089063
[2025-06-03 10:52:05] 2025-06-03 08:42:40,365 | INFO     | current chi2=0.9812255319089063 (change=7.40489795390231 %)
[2025-06-03 10:52:05] 2025-06-03 08:42:40,365 | INFO     | left removable region: 30
[2025-06-03 10:52:05] 2025-06-03 08:42:40,365 | INFO     | sum of square deviations: 1392881930.0
[2025-06-03 10:52:05] 2025-06-03 08:42:40,366 | INFO     | sum of deviations: -38089675571.00001
[2025-06-03 10:52:05] 2025-06-03 08:42:40,366 | INFO     | mean x: 1748934680.0
[2025-06-03 10:52:05] 2025-06-03 08:42:40,366 | INFO     | mean y: 2549409.7393939393
[2025-06-03 10:52:05] 2025-06-03 08:42:40,366 | INFO     | -- intersect: 47828824646.19875
[2025-06-03 10:52:05] 2025-06-03 08:42:40,367 | INFO     | intersect: 47828824646.19875
[2025-06-03 10:52:05] 2025-06-03 08:42:40,367 | INFO     | chi2: 0.18148782478357242
[2025-06-03 10:52:05] 2025-06-03 08:42:40,367 | INFO     | -- intersect: 47828824646.19875
[2025-06-03 10:52:05] 2025-06-03 08:42:40,367 | INFO     | current memory leak: -27.35 B/s (using 165 data points, chi2=0.18)
[2025-06-03 10:52:05] 2025-06-03 08:42:40,368 | INFO     | ..............................
[2025-06-03 10:52:05] 2025-06-03 08:42:40,368 | INFO     | . Timing measurements:
[2025-06-03 10:52:05] 2025-06-03 08:42:40,368 | INFO     | . get job = 0 s
[2025-06-03 10:52:05] 2025-06-03 08:42:40,368 | INFO     | . initial setup = 8 s
[2025-06-03 10:52:05] 2025-06-03 08:42:40,369 | INFO     | . payload setup = 138 s
[2025-06-03 10:52:05] 2025-06-03 08:42:40,369 | INFO     | . stage-in = 0 s
[2025-06-03 10:52:05] 2025-06-03 08:42:40,369 | INFO     | . payload execution = 12358 s
[2025-06-03 10:52:05] 2025-06-03 08:42:40,369 | INFO     | . stage-out = 2 s
[2025-06-03 10:52:05] 2025-06-03 08:42:40,369 | INFO     | . log creation = 0 s
[2025-06-03 10:52:05] 2025-06-03 08:42:40,369 | INFO     | ..............................
[2025-06-03 10:52:05] 2025-06-03 08:42:40,546 | INFO     | 
[2025-06-03 10:52:05] 2025-06-03 08:42:40,546 | INFO     | job summary report
[2025-06-03 10:52:05] 2025-06-03 08:42:40,546 | INFO     | --------------------------------------------------
[2025-06-03 10:52:05] 2025-06-03 08:42:40,546 | INFO     | PanDA job id: 6677396914
[2025-06-03 10:52:05] 2025-06-03 08:42:40,546 | INFO     | task id: 45006595
[2025-06-03 10:52:05] 2025-06-03 08:42:40,546 | INFO     | errors: (none)
[2025-06-03 10:52:05] 2025-06-03 08:42:40,546 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 10:52:05] 2025-06-03 08:42:40,546 | INFO     | pilot state: finished 
[2025-06-03 10:52:05] 2025-06-03 08:42:40,546 | INFO     | transexitcode: 0
[2025-06-03 10:52:05] 2025-06-03 08:42:40,547 | INFO     | exeerrorcode: 0
[2025-06-03 10:52:05] 2025-06-03 08:42:40,547 | INFO     | exeerrordiag: 
[2025-06-03 10:52:05] 2025-06-03 08:42:40,547 | INFO     | exitcode: 0
[2025-06-03 10:52:05] 2025-06-03 08:42:40,547 | INFO     | exitmsg: OK
[2025-06-03 10:52:05] 2025-06-03 08:42:40,547 | INFO     | cpuconsumptiontime: 45240 s
[2025-06-03 10:52:05] 2025-06-03 08:42:40,547 | INFO     | nevents: 400
[2025-06-03 10:52:05] 2025-06-03 08:42:40,547 | INFO     | neventsw: 0
[2025-06-03 10:52:05] 2025-06-03 08:42:40,547 | INFO     | pid: 9820
[2025-06-03 10:52:05] 2025-06-03 08:42:40,547 | INFO     | pgrp: 9820
[2025-06-03 10:52:05] 2025-06-03 08:42:40,547 | INFO     | corecount: 8
[2025-06-03 10:52:05] 2025-06-03 08:42:40,547 | INFO     | event service: False
[2025-06-03 10:52:05] 2025-06-03 08:42:40,547 | INFO     | sizes: {0: 2404352, 1: 2405037, 2: 2405236, 13: 2405236, 23: 2405292, 34: 2405320, 45: 2405476, 55: 2405504, 66: 2405532, 77: 2405560, 88: 2405616, 90: 2406130, 98
[2025-06-03 10:52:05] 2025-06-03 08:42:40,547 | INFO     | --------------------------------------------------
[2025-06-03 10:52:05] 2025-06-03 08:42:40,547 | INFO     | 
[2025-06-03 10:52:05] 2025-06-03 08:42:40,548 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-03 10:52:05] 2025-06-03 08:42:40,611 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,615 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,615 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,615 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,616 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,616 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,616 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,616 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,616 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,616 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,616 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,616 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,616 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,616 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,617 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,617 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,617 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,617 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 10:52:05] 2025-06-03 08:42:40,617 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,617 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 10:52:05] 2025-06-03 08:42:40,617 | INFO     | job 6677396914 has completed (purged errors)
[2025-06-03 10:52:05] 2025-06-03 08:42:40,617 | INFO     | overall cleanup function is called
[2025-06-03 10:52:05] 2025-06-03 08:42:41,631 | INFO     | --- collectZombieJob: --- 10, [9820]
[2025-06-03 10:52:05] 2025-06-03 08:42:41,631 | INFO     | zombie collector waiting for pid 9820
[2025-06-03 10:52:05] 2025-06-03 08:42:41,631 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 10:52:05] 2025-06-03 08:42:41,631 | INFO     | collected zombie processes
[2025-06-03 10:52:05] 2025-06-03 08:42:41,631 | INFO     | will attempt to kill all subprocesses of pid=9820
[2025-06-03 10:52:05] 2025-06-03 08:42:41,713 | INFO     | process IDs to be killed: [9820] (in reverse order)
[2025-06-03 10:52:05] 2025-06-03 08:42:42,513 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 10:52:05] 2025-06-03 08:42:42,513 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 10:52:05] 2025-06-03 08:42:42,516 | INFO     | did not find any defunct processes belonging to 9820
[2025-06-03 10:52:05] 2025-06-03 08:42:42,519 | INFO     | did not find any defunct processes belonging to 9820
[2025-06-03 10:52:05] 2025-06-03 08:42:42,520 | INFO     | ready for new job
[2025-06-03 10:52:05] 2025-06-03 08:42:42,520 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 10:52:05] 2025-06-03 08:42:42,522 | INFO     | **************************************
[2025-06-03 10:52:05] 2025-06-03 08:42:42,522 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 10:52:05] 2025-06-03 08:42:42,522 | INFO     | **************************************
[2025-06-03 10:52:05] 2025-06-03 08:42:42,522 | INFO     | 
[2025-06-03 10:52:05] 2025-06-03 08:42:42,523 | INFO     | pilot is running in a VM
[2025-06-03 10:52:05] 2025-06-03 08:42:42,523 | INFO     | architecture information:
[2025-06-03 10:52:05] 2025-06-03 08:42:42,527 | INFO     | executing command: cat /etc/os-release
[2025-06-03 10:52:05] 2025-06-03 08:42:42,797 | INFO     | cat /etc/os-release:
[2025-06-03 10:52:05] NAME="CentOS Linux"
[2025-06-03 10:52:05] VERSION="7 (Core)"
[2025-06-03 10:52:05] ID="centos"
[2025-06-03 10:52:05] ID_LIKE="rhel fedora"
[2025-06-03 10:52:05] VERSION_ID="7"
[2025-06-03 10:52:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 10:52:05] ANSI_COLOR="0;31"
[2025-06-03 10:52:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 10:52:05] HOME_URL="https://www.centos.org/"
[2025-06-03 10:52:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 10:52:05] 
[2025-06-03 10:52:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 10:52:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 10:52:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 10:52:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 10:52:05] 
[2025-06-03 10:52:05] 2025-06-03 08:42:42,797 | INFO     | **************************************
[2025-06-03 10:52:05] 2025-06-03 08:42:43,301 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-03 10:52:05] 2025-06-03 08:42:43,549 | INFO     | sufficient remaining disk space (496792240128 B)
[2025-06-03 10:52:05] 2025-06-03 08:42:43,549 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 10:52:05] 2025-06-03 08:42:43,549 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 10:52:05] 2025-06-03 08:42:43,549 | INFO     | update_server=False
[2025-06-03 10:52:05] 2025-06-03 08:42:43,549 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 10:52:05] 2025-06-03 08:42:43,552 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 10:52:05] 2025-06-03 08:42:43,552 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 10:52:05] 2025-06-03 08:42:43,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 10:52:05] 2025-06-03 08:42:43,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 10:52:05] 2025-06-03 08:42:43,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 10:52:05] 2025-06-03 08:42:43,878 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 10:52:05] 2025-06-03 08:42:43,878 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 10:52:05] 2025-06-03 08:42:43,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:52:05] 2025-06-03 08:42:43,878 | INFO     | will abort loop
[2025-06-03 10:52:05] 2025-06-03 08:42:44,235 | INFO     | all data control threads have been joined
[2025-06-03 10:52:05] 2025-06-03 08:42:44,555 | INFO     | [job] retrieve thread has finished
[2025-06-03 10:52:05] 2025-06-03 08:42:44,575 | INFO     | all payload control threads have been joined
[2025-06-03 10:52:05] 2025-06-03 08:42:44,878 | INFO     | all job control threads have been joined
[2025-06-03 10:52:05] 2025-06-03 08:42:44,884 | INFO     | [job] job monitor thread has finished
[2025-06-03 10:52:05] 2025-06-03 08:42:44,951 | INFO     | [job] validate thread has finished
[2025-06-03 10:52:05] 2025-06-03 08:42:44,960 | INFO     | [payload] failed_post thread has finished
[2025-06-03 10:52:05] 2025-06-03 08:42:45,219 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 10:52:05] 2025-06-03 08:42:45,241 | INFO     | [data] control thread has finished
[2025-06-03 10:52:05] 2025-06-03 08:42:45,561 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:52:05] 2025-06-03 08:42:45,561 | INFO     | [data] copytool_in thread has finished
[2025-06-03 10:52:05] 2025-06-03 08:42:45,578 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 10:52:05] 2025-06-03 08:42:45,581 | INFO     | [payload] control thread has finished
[2025-06-03 10:52:05] 2025-06-03 08:42:45,711 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 10:52:05] 2025-06-03 08:42:45,827 | INFO     | [data] copytool_out thread has finished
[2025-06-03 10:52:05] 2025-06-03 08:42:45,843 | INFO     | [payload] validate_post thread has finished
[2025-06-03 10:52:05] 2025-06-03 08:42:45,884 | INFO     | [job] control thread has finished
[2025-06-03 10:52:05] 2025-06-03 08:42:46,567 | INFO     | [job] queue monitor thread has finished
[2025-06-03 10:52:05] 2025-06-03 08:42:46,906 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 10:52:05] 2025-06-03 08:42:50,917 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 10:52:05] 2025-06-03 08:42:53,954 | INFO     | job.realtimelogging is not enabled
[2025-06-03 10:52:05] 2025-06-03 08:42:54,960 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 10:52:05] 2025-06-03 08:42:55,446 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139805621012288)>', '<ExcThread(monitor, started 139804742252288)>']
[2025-06-03 10:52:05] 2025-06-03 08:42:55,624 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 10:52:05] 2025-06-03 08:42:55,624 | INFO     | [monitor] control thread has ended
[2025-06-03 10:52:05] 2025-06-03 08:43:00,472 | INFO     | all workflow threads have been joined
[2025-06-03 10:52:05] 2025-06-03 08:43:00,472 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 10:52:05] 2025-06-03 08:43:00,472 | INFO     | traces error code: 0
[2025-06-03 10:52:05] 2025-06-03 08:43:00,473 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 10:52:05] 2025-06-03 08:43:00,832 [wrapper] ==== pilot stdout END ====
[2025-06-03 10:52:05] 2025-06-03 08:43:00,865 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 10:52:05] 2025-06-03 08:43:00,897 [wrapper] pilotpid: 3192
[2025-06-03 10:52:05] 2025-06-03 08:43:00,977 [wrapper] Pilot exit status: 0
[2025-06-03 10:52:05] 2025-06-03 08:43:01,517 [wrapper] pandaids: 6677396914
[2025-06-03 10:52:05] 2025-06-03 08:43:02,018 [wrapper] cleanup supervisor_pilot 31918 3193
[2025-06-03 10:52:05] 2025-06-03 08:43:02,032 [wrapper] Test setup, not cleaning
[2025-06-03 10:52:05] 2025-06-03 08:43:02,043 [wrapper] apfmon messages muted
[2025-06-03 10:52:05] 2025-06-03 08:43:02,058 [wrapper] ==== wrapper stdout END ====
[2025-06-03 10:52:05] 2025-06-03 08:43:02,074 [wrapper] ==== wrapper stderr END ====
[2025-06-03 10:52:05]  *** Error codes and diagnostics ***
[2025-06-03 10:52:05]     "exeErrorCode": 0,
[2025-06-03 10:52:05]     "exeErrorDiag": "",
[2025-06-03 10:52:05]     "pilotErrorCode": 0,
[2025-06-03 10:52:05]     "pilotErrorDiag": "",
[2025-06-03 10:52:05]  *** Listing of results directory ***
[2025-06-03 10:52:05] total 391344
[2025-06-03 10:52:05] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:34 pilot3.tar.gz
[2025-06-03 10:52:05] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:56 queuedata.json
[2025-06-03 10:52:05] -rwx------. 1 boinc boinc     37140 Jun  2 21:56 runpilot2-wrapper.sh
[2025-06-03 10:52:05] -rw-r--r--. 1 boinc boinc       100 Jun  3 07:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 10:52:05] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 07:06 run_atlas
[2025-06-03 10:52:05] -rw-r--r--. 1 boinc boinc       105 Jun  3 07:06 job.xml
[2025-06-03 10:52:05] -rw-r--r--. 1 boinc boinc      6391 Jun  3 07:06 init_data.xml
[2025-06-03 10:52:05] -rw-r--r--. 2 boinc boinc 215161949 Jun  3 07:06 EVNT.45006593._000408.pool.root.1
[2025-06-03 10:52:05] -rw-r--r--. 2 boinc boinc     15093 Jun  3 07:06 start_atlas.sh
[2025-06-03 10:52:05] drwxrwx--x. 2 boinc boinc        68 Jun  3 07:06 shared
[2025-06-03 10:52:05] -rw-r--r--. 2 boinc boinc    508877 Jun  3 07:06 input.tar.gz
[2025-06-03 10:52:05] -rw-r--r--. 1 boinc boinc         0 Jun  3 07:06 boinc_lockfile
[2025-06-03 10:52:05] -rw-r--r--. 1 boinc boinc      2523 Jun  3 07:06 pandaJob.out
[2025-06-03 10:52:05] -rw-------. 1 boinc boinc    988073 Jun  3 07:09 agis_schedconf.cvmfs.json
[2025-06-03 10:52:05] drwx------. 4 boinc boinc      4096 Jun  3 07:09 pilot3
[2025-06-03 10:52:05] -rw-------. 1 boinc boinc 178841664 Jun  3 10:39 HITS.45006595._010179.pool.root.1
[2025-06-03 10:52:05] -rw-r--r--. 1 boinc boinc       531 Jun  3 10:40 boinc_task_state.xml
[2025-06-03 10:52:05] -rw-------. 1 boinc boinc      1015 Jun  3 10:41 memory_monitor_summary.json
[2025-06-03 10:52:05] -rw-------. 1 boinc boinc   1603667 Jun  3 10:41 agis_ddmendpoints.agis.ALL.json
[2025-06-03 10:52:05] -rw-------. 1 boinc boinc    358710 Jun  3 10:41 log.45006595._010179.job.log.tgz.1
[2025-06-03 10:52:05] -rw-------. 1 boinc boinc      7691 Jun  3 10:42 heartbeat.json
[2025-06-03 10:52:05] -rw-------. 1 boinc boinc        95 Jun  3 10:42 pilot_heartbeat.json
[2025-06-03 10:52:05] -rw-------. 1 boinc boinc      4797 Jun  3 10:43 pilotlog.txt
[2025-06-03 10:52:05] -rw-------. 1 boinc boinc   1095491 Jun  3 10:43 log.45006595._010179.job.log.1
[2025-06-03 10:52:05] -rw-------. 1 boinc boinc       357 Jun  3 10:43 output.list
[2025-06-03 10:52:05] -rw-r--r--. 1 boinc boinc       620 Jun  3 10:43 runtime_log
[2025-06-03 10:52:05] -rw-------. 1 boinc boinc   1474560 Jun  3 10:43 result.tar.gz
[2025-06-03 10:52:05] -rw-r--r--. 1 boinc boinc      8659 Jun  3 10:43 runtime_log.err
[2025-06-03 10:52:05] -rw-------. 1 boinc boinc       656 Jun  3 10:43 ojzNDm2RQg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmISgKDmLrdoNm.diag
[2025-06-03 10:52:05] -rw-r--r--. 1 boinc boinc      8192 Jun  3 10:52 boinc_mmap_file
[2025-06-03 10:52:05] -rw-r--r--. 1 boinc boinc        28 Jun  3 10:52 wrapper_checkpoint.txt
[2025-06-03 10:52:05] -rw-r--r--. 1 boinc boinc     20525 Jun  3 10:52 stderr.txt
[2025-06-03 10:52:05] HITS file was successfully produced:
[2025-06-03 10:52:05] -rw-------. 1 boinc boinc 178841664 Jun  3 10:39 shared/HITS.pool.root.1
[2025-06-03 10:52:05]  *** Contents of shared directory: ***
[2025-06-03 10:52:05] total 386728
[2025-06-03 10:52:05] -rw-r--r--. 2 boinc boinc 215161949 Jun  3 07:06 ATLAS.root_0
[2025-06-03 10:52:05] -rw-r--r--. 2 boinc boinc     15093 Jun  3 07:06 start_atlas.sh
[2025-06-03 10:52:05] -rw-r--r--. 2 boinc boinc    508877 Jun  3 07:06 input.tar.gz
[2025-06-03 10:52:05] -rw-------. 1 boinc boinc 178841664 Jun  3 10:39 HITS.pool.root.1
[2025-06-03 10:52:05] -rw-------. 1 boinc boinc   1474560 Jun  3 10:43 result.tar.gz
10:52:07 (29287): run_atlas exited; CPU time 45396.708931
10:52:07 (29287): called boinc_finish(0)

</stderr_txt>
]]>

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