Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:54:51 (2649183): wrapper (7.7.26015): starting
07:54:51 (2649183): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 07:54:51] Arguments: --nthreads 4
[2025-06-06 07:54:51] Threads: 4
[2025-06-06 07:54:51] Checking for CVMFS
[2025-06-06 07:54:51] No cvmfs_config command found, will try listing directly
[2025-06-06 07:54:51] CVMFS is ok
[2025-06-06 07:54:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 07:54:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 07:54:51] Further information can be found at the LHC@home message board.
[2025-06-06 07:54:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 07:54:51] Checking for apptainer binary...
[2025-06-06 07:54:51] which: no apptainer in ((null))
[2025-06-06 07:54:51] apptainer is not installed, using version from CVMFS
[2025-06-06 07:54:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 07:54:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-06-06 07:54:52] apptainer works
[2025-06-06 07:54:52] Set ATHENA_PROC_NUMBER=4
[2025-06-06 07:54:52] Set ATHENA_CORE_NUMBER=4
[2025-06-06 07:54:52] Starting ATLAS job with PandaID=6677397424
[2025-06-06 07:54:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 09:23:21]  *** The last 200 lines of the pilot log: ***
[2025-06-06 09:23:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/32/log.45006595._010261.job.log.tgz.1
[2025-06-06 09:23:21]  workdir=None
[2025-06-06 09:23:21] ]
[2025-06-06 09:23:21] 2025-06-06 07:22:39,150 | INFO     | transferring file log.45006595._010261.job.log.tgz.1 from /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6677397424/log.45006595._010261.job.log.tgz.1 to /scratch/b
[2025-06-06 09:23:21] 2025-06-06 07:22:39,150 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6677397424/log.45006595._010261.job.log.tgz.1 /scratch/boinc/var/slot76/slots/0/lo
[2025-06-06 09:23:21] 2025-06-06 07:22:39,167 | INFO     | adding to output.list: log.45006595._010261.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/32/log.45006595._010261.job.log.tg
[2025-06-06 09:23:21] 2025-06-06 07:22:39,167 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 09:23:21] 2025-06-06 07:22:39,167 | INFO     | summary of transferred files:
[2025-06-06 09:23:21] 2025-06-06 07:22:39,168 | INFO     |  -- lfn=log.45006595._010261.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 09:23:21] 2025-06-06 07:22:39,168 | INFO     | stage-out finished correctly
[2025-06-06 09:23:21] 2025-06-06 07:22:42,484 | WARNING  | process 2661705 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 09:23:21] 2025-06-06 07:22:42,485 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6677397424/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 09:23:21] 2025-06-06 07:22:42,485 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6677397424/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 09:23:21] 2025-06-06 07:22:42,486 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2237653 B
[2025-06-06 09:23:21] 2025-06-06 07:22:42,486 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15562 B
[2025-06-06 09:23:21] 2025-06-06 07:22:42,486 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2025-06-06 09:23:21] 2025-06-06 07:22:42,503 | INFO     | sufficient remaining disk space (3305383133184 B)
[2025-06-06 09:23:21] 2025-06-06 07:22:42,503 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-06 09:23:21] 2025-06-06 07:22:42,504 | INFO     | size of work directory /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6677397424: 2539191 B (within 2537553920 B limit)
[2025-06-06 09:23:21] 2025-06-06 07:22:42,504 | INFO     | pfn file=/scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6677397424/HITS.45006595._010261.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-06 09:23:21] 2025-06-06 07:22:42,504 | INFO     | total size of present files: 0 B (workdir size: 2539191 B)
[2025-06-06 09:23:21] 2025-06-06 07:22:42,504 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6677397424/HITS.45006595._010261.pool.root.1 since it does not exist
[2025-06-06 09:23:21] 2025-06-06 07:22:42,716 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 09:23:21] 2025-06-06 07:22:42,780 | INFO     | job 6677397424 has state=finished
[2025-06-06 09:23:21] 2025-06-06 07:22:42,780 | INFO     | preparing for final server update for job 6677397424 in state='finished'
[2025-06-06 09:23:21] 2025-06-06 07:22:42,781 | INFO     | this job has now completed (state=finished)
[2025-06-06 09:23:21] 2025-06-06 07:22:42,781 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 09:23:21] 2025-06-06 07:22:42,781 | INFO     | log transfer has been attempted: DONE
[2025-06-06 09:23:21] 2025-06-06 07:22:42,781 | INFO     | job 6677397424 has finished - writing final server update
[2025-06-06 09:23:21] 2025-06-06 07:22:42,782 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2592324/.job.ad'
[2025-06-06 09:23:21] 2025-06-06 07:22:42,782 | INFO     | total number of processed events: 400 (read)
[2025-06-06 09:23:21] 2025-06-06 07:22:42,792 | INFO     | executing command: lscpu
[2025-06-06 09:23:21] 2025-06-06 07:22:42,879 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 09:23:21] 2025-06-06 07:22:43,050 | INFO     | number of running child processes to parent process 2661705: 1
[2025-06-06 09:23:21] 2025-06-06 07:22:43,051 | INFO     | maximum number of monitored processes: 6
[2025-06-06 09:23:21] 2025-06-06 07:22:45,554 | INFO     | monitor loop #380: job 0:6677397424 is in state 'finished'
[2025-06-06 09:23:21] 2025-06-06 07:22:45,554 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 09:23:21] 2025-06-06 07:22:48,058 | INFO     | monitor loop #381: job 0:6677397424 is in state 'finished'
[2025-06-06 09:23:21] 2025-06-06 07:22:48,058 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 09:23:21] 2025-06-06 07:22:48,433 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 09:23:21] 2025-06-06 07:22:48,434 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6677397424/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 09:23:21] 2025-06-06 07:22:48,434 | INFO     | extracted standard info from prmon json
[2025-06-06 09:23:21] 2025-06-06 07:22:48,434 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 09:23:21] 2025-06-06 07:22:48,435 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 09:23:21] 2025-06-06 07:22:48,435 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 09:23:21] 2025-06-06 07:22:48,435 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 09:23:21] 2025-06-06 07:22:48,437 | INFO     | fitting pss+swap vs Time
[2025-06-06 09:23:21] 2025-06-06 07:22:48,437 | INFO     | sum of square deviations: 152858680.0
[2025-06-06 09:23:21] 2025-06-06 07:22:48,437 | INFO     | sum of deviations: -1447919789.9999998
[2025-06-06 09:23:21] 2025-06-06 07:22:48,437 | INFO     | mean x: 1749192011.0
[2025-06-06 09:23:21] 2025-06-06 07:22:48,438 | INFO     | mean y: 2380162.670886076
[2025-06-06 09:23:21] 2025-06-06 07:22:48,438 | INFO     | -- intersect: 16571211773.913357
[2025-06-06 09:23:21] 2025-06-06 07:22:48,438 | INFO     | intersect: 16571211773.913357
[2025-06-06 09:23:21] 2025-06-06 07:22:48,438 | INFO     | chi2: 0.021508894254727868
[2025-06-06 09:23:21] 2025-06-06 07:22:48,438 | INFO     | -- intersect: 16571211773.913357
[2025-06-06 09:23:21] 2025-06-06 07:22:48,438 | INFO     | current memory leak: -9.47 B/s (using 79 data points, chi2=0.02)
[2025-06-06 09:23:21] 2025-06-06 07:22:48,439 | INFO     | ..............................
[2025-06-06 09:23:21] 2025-06-06 07:22:48,439 | INFO     | . Timing measurements:
[2025-06-06 09:23:21] 2025-06-06 07:22:48,439 | INFO     | . get job = 0 s
[2025-06-06 09:23:21] 2025-06-06 07:22:48,439 | INFO     | . initial setup = 1 s
[2025-06-06 09:23:21] 2025-06-06 07:22:48,439 | INFO     | . payload setup = 6 s
[2025-06-06 09:23:21] 2025-06-06 07:22:48,439 | INFO     | . stage-in = 0 s
[2025-06-06 09:23:21] 2025-06-06 07:22:48,439 | INFO     | . payload execution = 5232 s
[2025-06-06 09:23:21] 2025-06-06 07:22:48,439 | INFO     | . stage-out = 0 s
[2025-06-06 09:23:21] 2025-06-06 07:22:48,439 | INFO     | . log creation = 0 s
[2025-06-06 09:23:21] 2025-06-06 07:22:48,439 | INFO     | ..............................
[2025-06-06 09:23:21] 2025-06-06 07:22:48,527 | INFO     | 
[2025-06-06 09:23:21] 2025-06-06 07:22:48,528 | INFO     | job summary report
[2025-06-06 09:23:21] 2025-06-06 07:22:48,528 | INFO     | --------------------------------------------------
[2025-06-06 09:23:21] 2025-06-06 07:22:48,528 | INFO     | PanDA job id: 6677397424
[2025-06-06 09:23:21] 2025-06-06 07:22:48,528 | INFO     | task id: 45006595
[2025-06-06 09:23:21] 2025-06-06 07:22:48,528 | INFO     | errors: (none)
[2025-06-06 09:23:21] 2025-06-06 07:22:48,528 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 09:23:21] 2025-06-06 07:22:48,528 | INFO     | pilot state: finished 
[2025-06-06 09:23:21] 2025-06-06 07:22:48,528 | INFO     | transexitcode: 0
[2025-06-06 09:23:21] 2025-06-06 07:22:48,528 | INFO     | exeerrorcode: 0
[2025-06-06 09:23:21] 2025-06-06 07:22:48,528 | INFO     | exeerrordiag: 
[2025-06-06 09:23:21] 2025-06-06 07:22:48,528 | INFO     | exitcode: 0
[2025-06-06 09:23:21] 2025-06-06 07:22:48,528 | INFO     | exitmsg: OK
[2025-06-06 09:23:21] 2025-06-06 07:22:48,528 | INFO     | cpuconsumptiontime: 19946 s
[2025-06-06 09:23:21] 2025-06-06 07:22:48,528 | INFO     | nevents: 400
[2025-06-06 09:23:21] 2025-06-06 07:22:48,529 | INFO     | neventsw: 0
[2025-06-06 09:23:21] 2025-06-06 07:22:48,529 | INFO     | pid: 2661705
[2025-06-06 09:23:21] 2025-06-06 07:22:48,529 | INFO     | pgrp: 2661705
[2025-06-06 09:23:21] 2025-06-06 07:22:48,529 | INFO     | corecount: 4
[2025-06-06 09:23:21] 2025-06-06 07:22:48,529 | INFO     | event service: False
[2025-06-06 09:23:21] 2025-06-06 07:22:48,529 | INFO     | sizes: {0: 2397124, 1: 2397379, 6: 2397585, 11: 2397613, 5243: 2432877, 5247: 2432905, 5253: 2433203}
[2025-06-06 09:23:21] 2025-06-06 07:22:48,529 | INFO     | --------------------------------------------------
[2025-06-06 09:23:21] 2025-06-06 07:22:48,529 | INFO     | 
[2025-06-06 09:23:21] 2025-06-06 07:22:48,529 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2025-06-06 09:23:21] 2025-06-06 07:22:48,549 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,550 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 09:23:21] 2025-06-06 07:22:48,551 | INFO     | job 6677397424 has completed (purged errors)
[2025-06-06 09:23:21] 2025-06-06 07:22:48,551 | INFO     | overall cleanup function is called
[2025-06-06 09:23:21] 2025-06-06 07:22:49,555 | INFO     | --- collectZombieJob: --- 10, [2661705]
[2025-06-06 09:23:21] 2025-06-06 07:22:49,555 | INFO     | zombie collector waiting for pid 2661705
[2025-06-06 09:23:21] 2025-06-06 07:22:49,555 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 09:23:21] 2025-06-06 07:22:49,555 | INFO     | collected zombie processes
[2025-06-06 09:23:21] 2025-06-06 07:22:49,555 | INFO     | will attempt to kill all subprocesses of pid=2661705
[2025-06-06 09:23:21] 2025-06-06 07:22:50,048 | INFO     | process IDs to be killed: [2661705] (in reverse order)
[2025-06-06 09:23:21] 2025-06-06 07:22:50,217 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 09:23:21] 2025-06-06 07:22:50,217 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 09:23:21] 2025-06-06 07:22:50,236 | INFO     | did not find any defunct processes belonging to 2661705
[2025-06-06 09:23:21] 2025-06-06 07:22:50,250 | INFO     | did not find any defunct processes belonging to 2661705
[2025-06-06 09:23:21] 2025-06-06 07:22:50,250 | INFO     | ready for new job
[2025-06-06 09:23:21] 2025-06-06 07:22:50,250 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 09:23:21] 2025-06-06 07:22:50,251 | INFO     | **************************************
[2025-06-06 09:23:21] 2025-06-06 07:22:50,251 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 09:23:21] 2025-06-06 07:22:50,252 | INFO     | **************************************
[2025-06-06 09:23:21] 2025-06-06 07:22:50,252 | INFO     | 
[2025-06-06 09:23:21] 2025-06-06 07:22:50,257 | INFO     | architecture information:
[2025-06-06 09:23:21] 2025-06-06 07:22:50,258 | INFO     | executing command: cat /etc/os-release
[2025-06-06 09:23:21] 2025-06-06 07:22:50,274 | INFO     | cat /etc/os-release:
[2025-06-06 09:23:21] NAME="CentOS Linux"
[2025-06-06 09:23:21] VERSION="7 (Core)"
[2025-06-06 09:23:21] ID="centos"
[2025-06-06 09:23:21] ID_LIKE="rhel fedora"
[2025-06-06 09:23:21] VERSION_ID="7"
[2025-06-06 09:23:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 09:23:21] ANSI_COLOR="0;31"
[2025-06-06 09:23:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 09:23:21] HOME_URL="https://www.centos.org/"
[2025-06-06 09:23:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 09:23:21] 
[2025-06-06 09:23:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 09:23:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 09:23:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 09:23:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 09:23:21] 
[2025-06-06 09:23:21] 2025-06-06 07:22:50,274 | INFO     | **************************************
[2025-06-06 09:23:21] 2025-06-06 07:22:50,776 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2025-06-06 09:23:21] 2025-06-06 07:22:50,791 | INFO     | sufficient remaining disk space (3305377890304 B)
[2025-06-06 09:23:21] 2025-06-06 07:22:50,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 09:23:21] 2025-06-06 07:22:50,792 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 09:23:21] 2025-06-06 07:22:50,792 | INFO     | update_server=False
[2025-06-06 09:23:21] 2025-06-06 07:22:50,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 09:23:21] 2025-06-06 07:22:50,792 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 09:23:21] 2025-06-06 07:22:50,793 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 09:23:21] 2025-06-06 07:22:50,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 09:23:21] 2025-06-06 07:22:50,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 09:23:21] 2025-06-06 07:22:51,152 | INFO     | all data control threads have been joined
[2025-06-06 09:23:21] 2025-06-06 07:22:51,566 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:23:21] 2025-06-06 07:22:51,566 | INFO     | aborting loop
[2025-06-06 09:23:21] 2025-06-06 07:22:51,797 | INFO     | [job] retrieve thread has finished
[2025-06-06 09:23:21] 2025-06-06 07:22:51,885 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 09:23:21] 2025-06-06 07:22:51,926 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 09:23:21] 2025-06-06 07:22:52,143 | INFO     | all job control threads have been joined
[2025-06-06 09:23:21] 2025-06-06 07:22:52,146 | INFO     | all payload control threads have been joined
[2025-06-06 09:23:21] 2025-06-06 07:22:52,157 | INFO     | [data] control thread has finished
[2025-06-06 09:23:21] 2025-06-06 07:22:52,239 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 09:23:21] 2025-06-06 07:22:52,323 | INFO     | [payload] failed_post thread has finished
[2025-06-06 09:23:21] 2025-06-06 07:22:52,409 | INFO     | [payload] validate_post thread has finished
[2025-06-06 09:23:21] 2025-06-06 07:22:52,572 | INFO     | [job] job monitor thread has finished
[2025-06-06 09:23:21] 2025-06-06 07:22:52,670 | INFO     | [data] copytool_in thread has finished
[2025-06-06 09:23:21] 2025-06-06 07:22:53,037 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 09:23:21] 2025-06-06 07:22:53,149 | INFO     | [job] control thread has finished
[2025-06-06 09:23:21] 2025-06-06 07:22:53,152 | INFO     | [payload] control thread has finished
[2025-06-06 09:23:21] 2025-06-06 07:22:53,263 | INFO     | [job] validate thread has finished
[2025-06-06 09:23:21] 2025-06-06 07:22:53,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 09:23:21] 2025-06-06 07:22:53,538 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:23:21] 2025-06-06 07:22:54,244 | INFO     | [data] copytool_out thread has finished
[2025-06-06 09:23:21] 2025-06-06 07:22:54,544 | INFO     | [job] queue monitor thread has finished
[2025-06-06 09:23:21] 2025-06-06 07:22:57,293 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 09:23:21] 2025-06-06 07:23:01,403 | INFO     | job.realtimelogging is not enabled
[2025-06-06 09:23:21] 2025-06-06 07:23:02,409 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 09:23:21] 2025-06-06 07:23:03,921 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23184835561280)>', '<ExcThread(monitor, started 23184598337280)>']
[2025-06-06 09:23:21] 2025-06-06 07:23:04,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 09:23:21] 2025-06-06 07:23:04,857 | INFO     | [monitor] control thread has ended
[2025-06-06 09:23:21] 2025-06-06 07:23:08,923 | INFO     | all workflow threads have been joined
[2025-06-06 09:23:21] 2025-06-06 07:23:08,923 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 09:23:21] 2025-06-06 07:23:08,923 | INFO     | traces error code: 0
[2025-06-06 09:23:21] 2025-06-06 07:23:08,924 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 09:23:21] 2025-06-06 07:23:09,034 [wrapper] ==== pilot stdout END ====
[2025-06-06 09:23:21] 2025-06-06 07:23:09,036 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 09:23:21] 2025-06-06 07:23:09,039 [wrapper] pilotpid: 2653102
[2025-06-06 09:23:21] 2025-06-06 07:23:09,042 [wrapper] Pilot exit status: 0
[2025-06-06 09:23:21] 2025-06-06 07:23:09,054 [wrapper] pandaids: 6677397424
[2025-06-06 09:23:21] 2025-06-06 07:23:09,152 [wrapper] cleanup supervisor_pilot 2757806 2653103
[2025-06-06 09:23:21] 2025-06-06 07:23:09,155 [wrapper] Test setup, not cleaning
[2025-06-06 09:23:21] 2025-06-06 07:23:09,158 [wrapper] apfmon messages muted
[2025-06-06 09:23:21] 2025-06-06 07:23:09,161 [wrapper] ==== wrapper stdout END ====
[2025-06-06 09:23:21] 2025-06-06 07:23:09,164 [wrapper] ==== wrapper stderr END ====
[2025-06-06 09:23:21]  *** Error codes and diagnostics ***
[2025-06-06 09:23:21]     "exeErrorCode": 0,
[2025-06-06 09:23:21]     "exeErrorDiag": "",
[2025-06-06 09:23:21]     "pilotErrorCode": 0,
[2025-06-06 09:23:21]     "pilotErrorDiag": "",
[2025-06-06 09:23:21]  *** Listing of results directory ***
[2025-06-06 09:23:21] total 392924
[2025-06-06 09:23:21] -rw-r--r-- 1 boinc boinc    495897 Jun  2 21:34 pilot3.tar.gz
[2025-06-06 09:23:21] -rw-r--r-- 1 boinc boinc      5111 Jun  2 21:56 queuedata.json
[2025-06-06 09:23:21] -rwx------ 1 boinc boinc     37140 Jun  2 21:57 runpilot2-wrapper.sh
[2025-06-06 09:23:21] -rw-r--r-- 1 boinc boinc       100 Jun  6 07:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 09:23:21] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 07:54 run_atlas
[2025-06-06 09:23:21] -rw-r--r-- 1 boinc boinc       105 Jun  6 07:54 job.xml
[2025-06-06 09:23:21] -rw-r--r-- 1 boinc boinc      6686 Jun  6 07:54 init_data.xml
[2025-06-06 09:23:21] -rw-r--r-- 2 boinc boinc 216592680 Jun  6 07:54 EVNT.45006593._000411.pool.root.1
[2025-06-06 09:23:21] -rw-r--r-- 2 boinc boinc     15093 Jun  6 07:54 start_atlas.sh
[2025-06-06 09:23:21] drwxrwx--x 2 boinc boinc      4096 Jun  6 07:54 shared
[2025-06-06 09:23:21] -rw-r--r-- 2 boinc boinc    508884 Jun  6 07:54 input.tar.gz
[2025-06-06 09:23:21] -rw-r--r-- 1 boinc boinc         0 Jun  6 07:54 boinc_lockfile
[2025-06-06 09:23:21] -rw-r--r-- 1 boinc boinc      2524 Jun  6 07:54 pandaJob.out
[2025-06-06 09:23:21] -rw------- 1 boinc boinc    988109 Jun  6 07:54 agis_schedconf.cvmfs.json
[2025-06-06 09:23:21] -rw------- 1 boinc boinc   1598969 Jun  6 07:55 agis_ddmendpoints.agis.ALL.json
[2025-06-06 09:23:21] drwx------ 4 boinc boinc      4096 Jun  6 07:55 pilot3
[2025-06-06 09:23:21] -rw------- 1 boinc boinc 180441299 Jun  6 09:22 HITS.45006595._010261.pool.root.1
[2025-06-06 09:23:21] -rw-r--r-- 1 boinc boinc       528 Jun  6 09:22 boinc_task_state.xml
[2025-06-06 09:23:21] -rw------- 1 boinc boinc        95 Jun  6 09:22 pilot_heartbeat.json
[2025-06-06 09:23:21] -rw------- 1 boinc boinc      1027 Jun  6 09:22 memory_monitor_summary.json
[2025-06-06 09:23:21] -rw------- 1 boinc boinc    243035 Jun  6 09:22 log.45006595._010261.job.log.tgz.1
[2025-06-06 09:23:21] -rw------- 1 boinc boinc      7697 Jun  6 09:22 heartbeat.json
[2025-06-06 09:23:21] -rw-r--r-- 1 boinc boinc        26 Jun  6 09:22 wrapper_checkpoint.txt
[2025-06-06 09:23:21] -rw------- 1 boinc boinc      4559 Jun  6 09:23 pilotlog.txt
[2025-06-06 09:23:21] -rw------- 1 boinc boinc    498646 Jun  6 09:23 log.45006595._010261.job.log.1
[2025-06-06 09:23:21] -rw------- 1 boinc boinc       357 Jun  6 09:23 output.list
[2025-06-06 09:23:21] -rw-r--r-- 1 boinc boinc       620 Jun  6 09:23 runtime_log
[2025-06-06 09:23:21] -rw------- 1 boinc boinc    757760 Jun  6 09:23 result.tar.gz
[2025-06-06 09:23:21] -rw------- 1 boinc boinc       661 Jun  6 09:23 vpTMDmzSQg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqSgKDmPimYJo.diag
[2025-06-06 09:23:21] -rw-r--r-- 1 boinc boinc      9025 Jun  6 09:23 runtime_log.err
[2025-06-06 09:23:21] -rw-r--r-- 1 boinc boinc      8192 Jun  6 09:23 boinc_mmap_file
[2025-06-06 09:23:21] -rw-r--r-- 1 boinc boinc     22417 Jun  6 09:23 stderr.txt
[2025-06-06 09:23:21] HITS file was successfully produced:
[2025-06-06 09:23:21] -rw------- 1 boinc boinc 180441299 Jun  6 09:22 shared/HITS.pool.root.1
[2025-06-06 09:23:21]  *** Contents of shared directory: ***
[2025-06-06 09:23:21] total 389000
[2025-06-06 09:23:21] -rw-r--r-- 2 boinc boinc 216592680 Jun  6 07:54 ATLAS.root_0
[2025-06-06 09:23:21] -rw-r--r-- 2 boinc boinc     15093 Jun  6 07:54 start_atlas.sh
[2025-06-06 09:23:21] -rw-r--r-- 2 boinc boinc    508884 Jun  6 07:54 input.tar.gz
[2025-06-06 09:23:21] -rw------- 1 boinc boinc 180441299 Jun  6 09:22 HITS.pool.root.1
[2025-06-06 09:23:21] -rw------- 1 boinc boinc    757760 Jun  6 09:23 result.tar.gz
09:23:22 (2649183): run_atlas exited; CPU time 20168.859533
09:23:22 (2649183): called boinc_finish(0)

</stderr_txt>
]]>

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