Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:27:20 (11240): wrapper (7.7.26015): starting
07:27:20 (11240): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 07:27:20] Arguments: --nthreads 8
[2025-06-03 07:27:20] Threads: 8
[2025-06-03 07:27:20] Checking for CVMFS
[2025-06-03 07:27:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 07:27:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 07:27:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 07:27:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 07:27:21] 2.11.2.0 2200 31344 92340 146729 0 155 24250488 25165825 4353 130560 0 16337931 99.756 19569126 2125 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 07:27:21] CVMFS is ok
[2025-06-03 07:27:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 07:27:21] Checking for apptainer binary...
[2025-06-03 07:27:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 07:27:21] Running /usr/bin/apptainer --version
[2025-06-03 07:27:21] apptainer version 1.3.2-1.el7
[2025-06-03 07:27:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 07:27:23] cg-vwn296.simple-grid.lan
[2025-06-03 07:27:23] apptainer works
[2025-06-03 07:27:23] Set ATHENA_PROC_NUMBER=8
[2025-06-03 07:27:23] Set ATHENA_CORE_NUMBER=8
[2025-06-03 07:27:23] Starting ATLAS job with PandaID=6677397540
[2025-06-03 07:27:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/28 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:22:38]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:22:38] 2025-06-03 09:10:16,769 | INFO     | using path: /var/lib/boinc/slots/28/PanDA_Pilot-6677397540/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:22:38] 2025-06-03 09:10:16,770 | INFO     | extracted standard info from prmon json
[2025-06-03 13:22:38] 2025-06-03 09:10:16,770 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:22:38] 2025-06-03 09:10:16,770 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:22:38] 2025-06-03 09:10:16,770 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:22:38] 2025-06-03 09:10:16,770 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:22:38] 2025-06-03 09:10:16,775 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:22:38] 2025-06-03 09:10:16,776 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 13:22:38] 2025-06-03 09:10:16,784 | INFO     | sum of deviations: -35586683128.00001
[2025-06-03 13:22:38] 2025-06-03 09:10:16,785 | INFO     | mean x: 1748935110.0
[2025-06-03 13:22:38] 2025-06-03 09:10:16,785 | INFO     | mean y: 2517717.0414746543
[2025-06-03 13:22:38] 2025-06-03 09:10:16,785 | INFO     | -- intersect: 19645743341.917202
[2025-06-03 13:22:38] 2025-06-03 09:10:16,785 | INFO     | intersect: 19645743341.917202
[2025-06-03 13:22:38] 2025-06-03 09:10:16,785 | INFO     | chi2: 2.6459926217137446
[2025-06-03 13:22:38] 2025-06-03 09:10:16,786 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 13:22:38] 2025-06-03 09:10:16,788 | INFO     | sum of deviations: -20168306749.5
[2025-06-03 13:22:38] 2025-06-03 09:10:16,788 | INFO     | mean x: 1748934957.5
[2025-06-03 13:22:38] 2025-06-03 09:10:16,788 | INFO     | mean y: 2528513.8066037735
[2025-06-03 13:22:38] 2025-06-03 09:10:16,788 | INFO     | -- intersect: 11941495545.521225
[2025-06-03 13:22:38] 2025-06-03 09:10:16,788 | INFO     | intersect: 11941495545.521225
[2025-06-03 13:22:38] 2025-06-03 09:10:16,789 | INFO     | chi2: 1.8835495013774117
[2025-06-03 13:22:38] 2025-06-03 09:10:16,789 | INFO     | current chi2=1.8835495013774117 (change=28.81501309109914 %)
[2025-06-03 13:22:38] 2025-06-03 09:10:16,789 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 13:22:38] 2025-06-03 09:10:16,791 | INFO     | sum of deviations: -19240789702.00001
[2025-06-03 13:22:38] 2025-06-03 09:10:16,791 | INFO     | mean x: 1748934805.0
[2025-06-03 13:22:38] 2025-06-03 09:10:16,791 | INFO     | mean y: 2529207.144927536
[2025-06-03 13:22:38] 2025-06-03 09:10:16,791 | INFO     | -- intersect: 12237901507.834919
[2025-06-03 13:22:38] 2025-06-03 09:10:16,791 | INFO     | intersect: 12237901507.834919
[2025-06-03 13:22:38] 2025-06-03 09:10:16,792 | INFO     | chi2: 1.8824023764808557
[2025-06-03 13:22:38] 2025-06-03 09:10:16,792 | INFO     | current chi2=1.8824023764808557 (change=0.06090229620814957 %)
[2025-06-03 13:22:38] 2025-06-03 09:10:16,792 | INFO     | right removable region: 206
[2025-06-03 13:22:38] 2025-06-03 09:10:16,792 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 13:22:38] 2025-06-03 09:10:16,794 | INFO     | sum of deviations: -73306646483.0
[2025-06-03 13:22:38] 2025-06-03 09:10:16,794 | INFO     | mean x: 1748935262.5
[2025-06-03 13:22:38] 2025-06-03 09:10:16,794 | INFO     | mean y: 2544366.386792453
[2025-06-03 13:22:38] 2025-06-03 09:10:16,794 | INFO     | -- intersect: 43397649323.153755
[2025-06-03 13:22:38] 2025-06-03 09:10:16,795 | INFO     | intersect: 43397649323.153755
[2025-06-03 13:22:38] 2025-06-03 09:10:16,795 | INFO     | chi2: 1.0152938762428427
[2025-06-03 13:22:38] 2025-06-03 09:10:16,795 | INFO     | current chi2=1.0152938762428427 (change=61.628998209932206 %)
[2025-06-03 13:22:38] 2025-06-03 09:10:16,796 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 13:22:38] 2025-06-03 09:10:16,797 | INFO     | sum of deviations: -71848467469.0
[2025-06-03 13:22:38] 2025-06-03 09:10:16,797 | INFO     | mean x: 1748935415.0
[2025-06-03 13:22:38] 2025-06-03 09:10:16,798 | INFO     | mean y: 2543235.695652174
[2025-06-03 13:22:38] 2025-06-03 09:10:16,798 | INFO     | -- intersect: 45691575180.111916
[2025-06-03 13:22:38] 2025-06-03 09:10:16,798 | INFO     | intersect: 45691575180.111916
[2025-06-03 13:22:38] 2025-06-03 09:10:16,798 | INFO     | chi2: 0.9950561212875401
[2025-06-03 13:22:38] 2025-06-03 09:10:16,798 | INFO     | current chi2=0.9950561212875401 (change=1.9932903594566846 %)
[2025-06-03 13:22:38] 2025-06-03 09:10:16,798 | INFO     | left removable region: 20
[2025-06-03 13:22:38] 2025-06-03 09:10:16,799 | INFO     | sum of square deviations: 1995283922.5
[2025-06-03 13:22:38] 2025-06-03 09:10:16,800 | INFO     | sum of deviations: -42743080762.0
[2025-06-03 13:22:38] 2025-06-03 09:10:16,800 | INFO     | mean x: 1748935384.5
[2025-06-03 13:22:38] 2025-06-03 09:10:16,800 | INFO     | mean y: 2546524.8387096776
[2025-06-03 13:22:38] 2025-06-03 09:10:16,801 | INFO     | -- intersect: 37468335500.64449
[2025-06-03 13:22:38] 2025-06-03 09:10:16,801 | INFO     | intersect: 37468335500.64449
[2025-06-03 13:22:38] 2025-06-03 09:10:16,801 | INFO     | chi2: 0.1919156659034844
[2025-06-03 13:22:38] 2025-06-03 09:10:16,801 | INFO     | -- intersect: 37468335500.64449
[2025-06-03 13:22:38] 2025-06-03 09:10:16,808 | INFO     | current memory leak: -21.42 B/s (using 186 data points, chi2=0.19)
[2025-06-03 13:22:38] 2025-06-03 09:10:16,809 | INFO     | ..............................
[2025-06-03 13:22:38] 2025-06-03 09:10:16,809 | INFO     | . Timing measurements:
[2025-06-03 13:22:38] 2025-06-03 09:10:16,809 | INFO     | . get job = 0 s
[2025-06-03 13:22:38] 2025-06-03 09:10:16,809 | INFO     | . initial setup = 2 s
[2025-06-03 13:22:38] 2025-06-03 09:10:16,809 | INFO     | . payload setup = 17 s
[2025-06-03 13:22:38] 2025-06-03 09:10:16,809 | INFO     | . stage-in = 0 s
[2025-06-03 13:22:38] 2025-06-03 09:10:16,809 | INFO     | . payload execution = 13209 s
[2025-06-03 13:22:38] 2025-06-03 09:10:16,810 | INFO     | . stage-out = 2 s
[2025-06-03 13:22:38] 2025-06-03 09:10:16,810 | INFO     | . log creation = 0 s
[2025-06-03 13:22:38] 2025-06-03 09:10:16,810 | INFO     | ..............................
[2025-06-03 13:22:38] 2025-06-03 09:10:17,391 | INFO     | 
[2025-06-03 13:22:38] 2025-06-03 09:10:17,392 | INFO     | job summary report
[2025-06-03 13:22:38] 2025-06-03 09:10:17,392 | INFO     | --------------------------------------------------
[2025-06-03 13:22:38] 2025-06-03 09:10:17,392 | INFO     | PanDA job id: 6677397540
[2025-06-03 13:22:38] 2025-06-03 09:10:17,392 | INFO     | task id: 45006595
[2025-06-03 13:22:38] 2025-06-03 09:10:17,392 | INFO     | errors: (none)
[2025-06-03 13:22:38] 2025-06-03 09:10:17,392 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:22:38] 2025-06-03 09:10:17,392 | INFO     | pilot state: finished 
[2025-06-03 13:22:38] 2025-06-03 09:10:17,392 | INFO     | transexitcode: 0
[2025-06-03 13:22:38] 2025-06-03 09:10:17,392 | INFO     | exeerrorcode: 0
[2025-06-03 13:22:38] 2025-06-03 09:10:17,393 | INFO     | exeerrordiag: 
[2025-06-03 13:22:38] 2025-06-03 09:10:17,393 | INFO     | exitcode: 0
[2025-06-03 13:22:38] 2025-06-03 09:10:17,393 | INFO     | exitmsg: OK
[2025-06-03 13:22:38] 2025-06-03 09:10:17,393 | INFO     | cpuconsumptiontime: 49400 s
[2025-06-03 13:22:38] 2025-06-03 09:10:17,393 | INFO     | nevents: 400
[2025-06-03 13:22:38] 2025-06-03 09:10:17,393 | INFO     | neventsw: 0
[2025-06-03 13:22:38] 2025-06-03 09:10:17,393 | INFO     | pid: 25473
[2025-06-03 13:22:38] 2025-06-03 09:10:17,393 | INFO     | pgrp: 25473
[2025-06-03 13:22:38] 2025-06-03 09:10:17,393 | INFO     | corecount: 8
[2025-06-03 13:22:38] 2025-06-03 09:10:17,393 | INFO     | event service: False
[2025-06-03 13:22:38] 2025-06-03 09:10:17,393 | INFO     | sizes: {0: 2404956, 1: 2405211, 2: 2405211, 12: 2405473, 13230: 2434952, 13233: 2443895, 13235: 2444079, 13332: 2444249}
[2025-06-03 13:22:38] 2025-06-03 09:10:17,393 | INFO     | --------------------------------------------------
[2025-06-03 13:22:38] 2025-06-03 09:10:17,393 | INFO     | 
[2025-06-03 13:22:38] 2025-06-03 09:10:17,394 | INFO     | executing command: ls -lF /var/lib/boinc/slots/28
[2025-06-03 13:22:38] 2025-06-03 09:10:17,756 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,756 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,756 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,757 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,757 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,757 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,757 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,757 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,757 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,757 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,757 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,757 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,758 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,758 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,758 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,758 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,758 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,758 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:22:38] 2025-06-03 09:10:17,758 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,758 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:22:38] 2025-06-03 09:10:17,759 | INFO     | job 6677397540 has completed (purged errors)
[2025-06-03 13:22:38] 2025-06-03 09:10:17,759 | INFO     | overall cleanup function is called
[2025-06-03 13:22:38] 2025-06-03 09:10:18,776 | INFO     | --- collectZombieJob: --- 10, [25473]
[2025-06-03 13:22:38] 2025-06-03 09:10:18,777 | INFO     | zombie collector waiting for pid 25473
[2025-06-03 13:22:38] 2025-06-03 09:10:18,777 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:22:38] 2025-06-03 09:10:18,777 | INFO     | collected zombie processes
[2025-06-03 13:22:38] 2025-06-03 09:10:18,777 | INFO     | will attempt to kill all subprocesses of pid=25473
[2025-06-03 13:22:38] 2025-06-03 09:10:18,949 | INFO     | process IDs to be killed: [25473] (in reverse order)
[2025-06-03 13:22:38] 2025-06-03 09:10:19,815 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:22:38] 2025-06-03 09:10:19,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:22:38] 2025-06-03 09:10:19,819 | INFO     | did not find any defunct processes belonging to 25473
[2025-06-03 13:22:38] 2025-06-03 09:10:19,821 | INFO     | did not find any defunct processes belonging to 25473
[2025-06-03 13:22:38] 2025-06-03 09:10:19,822 | INFO     | ready for new job
[2025-06-03 13:22:38] 2025-06-03 09:10:19,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:22:38] 2025-06-03 09:10:19,824 | INFO     | **************************************
[2025-06-03 13:22:38] 2025-06-03 09:10:19,824 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:22:38] 2025-06-03 09:10:19,824 | INFO     | **************************************
[2025-06-03 13:22:38] 2025-06-03 09:10:19,824 | INFO     | 
[2025-06-03 13:22:38] 2025-06-03 09:10:19,825 | INFO     | pilot is running in a VM
[2025-06-03 13:22:38] 2025-06-03 09:10:19,825 | INFO     | architecture information:
[2025-06-03 13:22:38] 2025-06-03 09:10:19,827 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:22:38] 2025-06-03 09:10:20,084 | INFO     | cat /etc/os-release:
[2025-06-03 13:22:38] NAME="CentOS Linux"
[2025-06-03 13:22:38] VERSION="7 (Core)"
[2025-06-03 13:22:38] ID="centos"
[2025-06-03 13:22:38] ID_LIKE="rhel fedora"
[2025-06-03 13:22:38] VERSION_ID="7"
[2025-06-03 13:22:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:22:38] ANSI_COLOR="0;31"
[2025-06-03 13:22:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:22:38] HOME_URL="https://www.centos.org/"
[2025-06-03 13:22:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:22:38] 
[2025-06-03 13:22:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:22:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:22:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:22:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:22:38] 
[2025-06-03 13:22:38] 2025-06-03 09:10:20,084 | INFO     | **************************************
[2025-06-03 13:22:38] 2025-06-03 09:10:20,588 | INFO     | executing command: df -mP /var/lib/boinc/slots/28
[2025-06-03 13:22:38] 2025-06-03 09:10:20,863 | INFO     | sufficient remaining disk space (497076404224 B)
[2025-06-03 13:22:38] 2025-06-03 09:10:20,864 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:22:38] 2025-06-03 09:10:20,864 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:22:38] 2025-06-03 09:10:20,864 | INFO     | update_server=False
[2025-06-03 13:22:38] 2025-06-03 09:10:20,864 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:22:38] 2025-06-03 09:10:20,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:22:38] 2025-06-03 09:10:20,865 | INFO     | aborting loop
[2025-06-03 13:22:38] 2025-06-03 09:10:20,997 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:22:38] 2025-06-03 09:10:20,997 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:22:38] 2025-06-03 09:10:20,997 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:22:38] 2025-06-03 09:10:21,005 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:22:38] 2025-06-03 09:10:21,487 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:22:38] 2025-06-03 09:10:21,731 | INFO     | all payload control threads have been joined
[2025-06-03 13:22:38] 2025-06-03 09:10:21,830 | INFO     | all data control threads have been joined
[2025-06-03 13:22:38] 2025-06-03 09:10:21,870 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:22:38] 2025-06-03 09:10:21,871 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:22:38] 2025-06-03 09:10:21,940 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:22:38] 2025-06-03 09:10:21,976 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:22:38] 2025-06-03 09:10:22,330 | INFO     | all job control threads have been joined
[2025-06-03 13:22:38] 2025-06-03 09:10:22,410 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:22:38] 2025-06-03 09:10:22,653 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:22:38] 2025-06-03 09:10:22,702 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:22:38] 2025-06-03 09:10:22,738 | INFO     | [payload] control thread has finished
[2025-06-03 13:22:38] 2025-06-03 09:10:22,836 | INFO     | [data] control thread has finished
[2025-06-03 13:22:38] 2025-06-03 09:10:22,873 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:22:38] 2025-06-03 09:10:22,983 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:22:38] 2025-06-03 09:10:23,097 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:22:38] 2025-06-03 09:10:23,336 | INFO     | [job] control thread has finished
[2025-06-03 13:22:38] 2025-06-03 09:10:23,337 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:22:38] 2025-06-03 09:10:23,366 | INFO     | [job] validate thread has finished
[2025-06-03 13:22:38] 2025-06-03 09:10:23,494 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:22:38] 2025-06-03 09:10:25,015 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:22:38] 2025-06-03 09:10:25,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139674620630848)>', '<ExcThread(monitor, started 139674181940992)>']
[2025-06-03 13:22:38] 2025-06-03 09:10:26,027 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:22:38] 2025-06-03 09:10:26,028 | INFO     | [monitor] control thread has ended
[2025-06-03 13:22:38] 2025-06-03 09:10:30,596 | INFO     | all workflow threads have been joined
[2025-06-03 13:22:38] 2025-06-03 09:10:30,597 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:22:38] 2025-06-03 09:10:30,597 | INFO     | traces error code: 0
[2025-06-03 13:22:38] 2025-06-03 09:10:30,597 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:22:38] 2025-06-03 09:10:30,951 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:22:38] 2025-06-03 09:10:31,016 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:22:38] 2025-06-03 09:10:31,121 [wrapper] pilotpid: 14954
[2025-06-03 13:22:38] 2025-06-03 09:10:31,223 [wrapper] Pilot exit status: 0
[2025-06-03 13:22:38] 2025-06-03 09:10:31,718 [wrapper] pandaids: 6677397540
[2025-06-03 13:22:38] 2025-06-03 09:10:32,629 [wrapper] cleanup supervisor_pilot 16149 14955
[2025-06-03 13:22:38] 2025-06-03 09:10:32,693 [wrapper] Test setup, not cleaning
[2025-06-03 13:22:38] 2025-06-03 09:10:32,828 [wrapper] apfmon messages muted
[2025-06-03 13:22:38] 2025-06-03 09:10:32,918 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:22:38] 2025-06-03 09:10:33,037 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:22:38]  *** Error codes and diagnostics ***
[2025-06-03 13:22:38]     "exeErrorCode": 0,
[2025-06-03 13:22:38]     "exeErrorDiag": "",
[2025-06-03 13:22:38]     "pilotErrorCode": 0,
[2025-06-03 13:22:38]     "pilotErrorDiag": "",
[2025-06-03 13:22:38]  *** Listing of results directory ***
[2025-06-03 13:22:38] total 393104
[2025-06-03 13:22:38] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:34 pilot3.tar.gz
[2025-06-03 13:22:38] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:57 queuedata.json
[2025-06-03 13:22:38] -rwx------. 1 boinc boinc     37140 Jun  2 21:58 runpilot2-wrapper.sh
[2025-06-03 13:22:38] -rw-r--r--. 1 boinc boinc       100 Jun  3 07:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:22:38] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 07:27 run_atlas
[2025-06-03 13:22:38] -rw-r--r--. 1 boinc boinc       105 Jun  3 07:27 job.xml
[2025-06-03 13:22:38] -rw-r--r--. 1 boinc boinc      6392 Jun  3 07:27 init_data.xml
[2025-06-03 13:22:38] -rw-r--r--. 2 boinc boinc 214794013 Jun  3 07:27 EVNT.45006593._000415.pool.root.1
[2025-06-03 13:22:38] -rw-r--r--. 2 boinc boinc     15093 Jun  3 07:27 start_atlas.sh
[2025-06-03 13:22:38] drwxrwx--x. 2 boinc boinc        68 Jun  3 07:27 shared
[2025-06-03 13:22:38] -rw-r--r--. 2 boinc boinc    508883 Jun  3 07:27 input.tar.gz
[2025-06-03 13:22:38] -rw-r--r--. 1 boinc boinc         0 Jun  3 07:27 boinc_lockfile
[2025-06-03 13:22:38] -rw-r--r--. 1 boinc boinc      2524 Jun  3 07:27 pandaJob.out
[2025-06-03 13:22:38] -rw-------. 1 boinc boinc    988073 Jun  3 07:27 agis_schedconf.cvmfs.json
[2025-06-03 13:22:38] drwx------. 4 boinc boinc      4096 Jun  3 07:27 pilot3
[2025-06-03 13:22:38] -rw-------. 1 boinc boinc 180801835 Jun  3 11:07 HITS.45006595._010377.pool.root.1
[2025-06-03 13:22:38] -rw-r--r--. 1 boinc boinc       530 Jun  3 11:07 boinc_task_state.xml
[2025-06-03 13:22:38] -rw-------. 1 boinc boinc      1019 Jun  3 11:08 memory_monitor_summary.json
[2025-06-03 13:22:38] -rw-------. 1 boinc boinc   1603667 Jun  3 11:08 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:22:38] -rw-------. 1 boinc boinc    393540 Jun  3 11:08 log.45006595._010377.job.log.tgz.1
[2025-06-03 13:22:38] -rw-------. 1 boinc boinc        95 Jun  3 11:09 pilot_heartbeat.json
[2025-06-03 13:22:38] -rw-------. 1 boinc boinc      7694 Jun  3 11:10 heartbeat.json
[2025-06-03 13:22:38] -rw-------. 1 boinc boinc      4417 Jun  3 11:10 pilotlog.txt
[2025-06-03 13:22:38] -rw-------. 1 boinc boinc   1159646 Jun  3 11:10 log.45006595._010377.job.log.1
[2025-06-03 13:22:38] -rw-------. 1 boinc boinc       357 Jun  3 11:10 output.list
[2025-06-03 13:22:38] -rw-r--r--. 1 boinc boinc       620 Jun  3 11:10 runtime_log
[2025-06-03 13:22:38] -rw-------. 1 boinc boinc   1576960 Jun  3 11:10 result.tar.gz
[2025-06-03 13:22:38] -rw-r--r--. 1 boinc boinc      8673 Jun  3 11:10 runtime_log.err
[2025-06-03 13:22:38] -rw-------. 1 boinc boinc       656 Jun  3 11:10 heqMDm6TQg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFUWKDmssLlYm.diag
[2025-06-03 13:22:38] -rw-r--r--. 1 boinc boinc      8192 Jun  3 13:22 boinc_mmap_file
[2025-06-03 13:22:38] -rw-r--r--. 1 boinc boinc        28 Jun  3 13:22 wrapper_checkpoint.txt
[2025-06-03 13:22:38] -rw-r--r--. 1 boinc boinc     20488 Jun  3 13:22 stderr.txt
[2025-06-03 13:22:38] HITS file was successfully produced:
[2025-06-03 13:22:38] -rw-------. 1 boinc boinc 180801835 Jun  3 11:07 shared/HITS.pool.root.1
[2025-06-03 13:22:38]  *** Contents of shared directory: ***
[2025-06-03 13:22:38] total 388384
[2025-06-03 13:22:38] -rw-r--r--. 2 boinc boinc 214794013 Jun  3 07:27 ATLAS.root_0
[2025-06-03 13:22:38] -rw-r--r--. 2 boinc boinc     15093 Jun  3 07:27 start_atlas.sh
[2025-06-03 13:22:38] -rw-r--r--. 2 boinc boinc    508883 Jun  3 07:27 input.tar.gz
[2025-06-03 13:22:38] -rw-------. 1 boinc boinc 180801835 Jun  3 11:07 HITS.pool.root.1
[2025-06-03 13:22:38] -rw-------. 1 boinc boinc   1576960 Jun  3 11:10 result.tar.gz
13:22:40 (11240): run_atlas exited; CPU time 49563.828811
13:22:40 (11240): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN