Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:01:49 (917341): wrapper (7.7.26015): starting
06:01:49 (917341): wrapper: running run_atlas (--nthreads 2)
[2025-06-03 06:01:49] Arguments: --nthreads 2
[2025-06-03 06:01:49] Threads: 2
[2025-06-03 06:01:49] Checking for CVMFS
[2025-06-03 06:01:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 06:01:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 06:01:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 06:01:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 06:01:49] 2.9.2.0 752711 660 54000 146724 0 61 30510444 36864000 0 130560 0 434681 99.991 148191 42978 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-03 06:01:49] CVMFS is ok
[2025-06-03 06:01:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 06:01:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 06:01:49] Further information can be found at the LHC@home message board.
[2025-06-03 06:01:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 06:01:49] Checking for apptainer binary...
[2025-06-03 06:01:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 06:01:49] Running /usr/bin/apptainer --version
[2025-06-03 06:01:50] apptainer version 1.3.6-6.1
[2025-06-03 06:01:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:01:50] thA365a
[2025-06-03 06:01:50] apptainer works
[2025-06-03 06:01:50] Set ATHENA_PROC_NUMBER=2
[2025-06-03 06:01:50] Set ATHENA_CORE_NUMBER=2
[2025-06-03 06:01:50] Starting ATLAS job with PandaID=6677402158
[2025-06-03 06:01:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 07:55:01]  *** The last 200 lines of the pilot log: ***
[2025-06-03 07:55:01] 2025-06-03 05:54:41,853 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 07:55:01] 2025-06-03 05:54:41,853 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 07:55:01] 2025-06-03 05:54:41,853 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 07:55:01] 2025-06-03 05:54:41,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 07:55:01] 2025-06-03 05:54:41,854 | INFO     | fitting pss+swap vs Time
[2025-06-03 07:55:01] 2025-06-03 05:54:41,854 | INFO     | sum of square deviations: 424045160.0
[2025-06-03 07:55:01] 2025-06-03 05:54:41,854 | INFO     | sum of deviations: 7522832563.999997
[2025-06-03 07:55:01] 2025-06-03 05:54:41,854 | INFO     | mean x: 1748926706.0
[2025-06-03 07:55:01] 2025-06-03 05:54:41,854 | INFO     | mean y: 2280790.828828829
[2025-06-03 07:55:01] 2025-06-03 05:54:41,854 | INFO     | -- intersect: -31024798438.058136
[2025-06-03 07:55:01] 2025-06-03 05:54:41,854 | INFO     | intersect: -31024798438.058136
[2025-06-03 07:55:01] 2025-06-03 05:54:41,854 | INFO     | chi2: 2.0753566620637525
[2025-06-03 07:55:01] 2025-06-03 05:54:41,854 | INFO     | sum of square deviations: 369281342.5
[2025-06-03 07:55:01] 2025-06-03 05:54:41,854 | INFO     | sum of deviations: 12849206072.499996
[2025-06-03 07:55:01] 2025-06-03 05:54:41,854 | INFO     | mean x: 1748926553.5
[2025-06-03 07:55:01] 2025-06-03 05:54:41,854 | INFO     | mean y: 2294988.0283018867
[2025-06-03 07:55:01] 2025-06-03 05:54:41,854 | INFO     | -- intersect: -60851896939.062325
[2025-06-03 07:55:01] 2025-06-03 05:54:41,854 | INFO     | intersect: -60851896939.062325
[2025-06-03 07:55:01] 2025-06-03 05:54:41,855 | INFO     | chi2: 1.449605925817286
[2025-06-03 07:55:01] 2025-06-03 05:54:41,855 | INFO     | current chi2=1.449605925817286 (change=30.151479390738295 %)
[2025-06-03 07:55:01] 2025-06-03 05:54:41,855 | INFO     | sum of square deviations: 319447850.0
[2025-06-03 07:55:01] 2025-06-03 05:54:41,855 | INFO     | sum of deviations: 11824482719.000002
[2025-06-03 07:55:01] 2025-06-03 05:54:41,855 | INFO     | mean x: 1748926401.0
[2025-06-03 07:55:01] 2025-06-03 05:54:41,855 | INFO     | mean y: 2291851.4356435644
[2025-06-03 07:55:01] 2025-06-03 05:54:41,855 | INFO     | -- intersect: -64734878880.5864
[2025-06-03 07:55:01] 2025-06-03 05:54:41,855 | INFO     | intersect: -64734878880.5864
[2025-06-03 07:55:01] 2025-06-03 05:54:41,855 | INFO     | chi2: 1.4529694146851158
[2025-06-03 07:55:01] 2025-06-03 05:54:41,855 | INFO     | current chi2=1.4529694146851158 (change=-0.23202780893251712 %)
[2025-06-03 07:55:01] 2025-06-03 05:54:41,855 | INFO     | right removable region: 100
[2025-06-03 07:55:01] 2025-06-03 05:54:41,855 | INFO     | sum of square deviations: 369281342.5
[2025-06-03 07:55:01] 2025-06-03 05:54:41,855 | INFO     | sum of deviations: -4353951005.999999
[2025-06-03 07:55:01] 2025-06-03 05:54:41,855 | INFO     | mean x: 1748926858.5
[2025-06-03 07:55:01] 2025-06-03 05:54:41,855 | INFO     | mean y: 2312816.886792453
[2025-06-03 07:55:01] 2025-06-03 05:54:41,855 | INFO     | -- intersect: 20622747641.55301
[2025-06-03 07:55:01] 2025-06-03 05:54:41,856 | INFO     | intersect: 20622747641.55301
[2025-06-03 07:55:01] 2025-06-03 05:54:41,856 | INFO     | chi2: 0.7348383090695205
[2025-06-03 07:55:01] 2025-06-03 05:54:41,856 | INFO     | current chi2=0.7348383090695205 (change=64.59219166989875 %)
[2025-06-03 07:55:01] 2025-06-03 05:54:41,856 | INFO     | sum of square deviations: 319447850.0
[2025-06-03 07:55:01] 2025-06-03 05:54:41,856 | INFO     | sum of deviations: -1162697392.999999
[2025-06-03 07:55:01] 2025-06-03 05:54:41,856 | INFO     | mean x: 1748927011.0
[2025-06-03 07:55:01] 2025-06-03 05:54:41,856 | INFO     | mean y: 2303264.801980198
[2025-06-03 07:55:01] 2025-06-03 05:54:41,856 | INFO     | -- intersect: 6367889623.379697
[2025-06-03 07:55:01] 2025-06-03 05:54:41,856 | INFO     | intersect: 6367889623.379697
[2025-06-03 07:55:01] 2025-06-03 05:54:41,856 | INFO     | chi2: 0.6637753199877877
[2025-06-03 07:55:01] 2025-06-03 05:54:41,856 | INFO     | current chi2=0.6637753199877877 (change=9.67056129282582 %)
[2025-06-03 07:55:01] 2025-06-03 05:54:41,856 | INFO     | left removable region: 20
[2025-06-03 07:55:01] 2025-06-03 05:54:41,856 | INFO     | sum of square deviations: 158737860.0
[2025-06-03 07:55:01] 2025-06-03 05:54:41,856 | INFO     | sum of deviations: 2340861549.5
[2025-06-03 07:55:01] 2025-06-03 05:54:41,856 | INFO     | mean x: 1748926980.5
[2025-06-03 07:55:01] 2025-06-03 05:54:41,856 | INFO     | mean y: 2322310.5375
[2025-06-03 07:55:01] 2025-06-03 05:54:41,856 | INFO     | -- intersect: -25788600671.13547
[2025-06-03 07:55:01] 2025-06-03 05:54:41,856 | INFO     | intersect: -25788600671.13547
[2025-06-03 07:55:01] 2025-06-03 05:54:41,857 | INFO     | chi2: 0.00030714891466637214
[2025-06-03 07:55:01] 2025-06-03 05:54:41,857 | INFO     | -- intersect: -25788600671.13547
[2025-06-03 07:55:01] 2025-06-03 05:54:41,857 | INFO     | current memory leak: 14.75 B/s (using 80 data points, chi2=0.00)
[2025-06-03 07:55:01] 2025-06-03 05:54:41,857 | INFO     | ..............................
[2025-06-03 07:55:01] 2025-06-03 05:54:41,857 | INFO     | . Timing measurements:
[2025-06-03 07:55:01] 2025-06-03 05:54:41,857 | INFO     | . get job = 0 s
[2025-06-03 07:55:01] 2025-06-03 05:54:41,857 | INFO     | . initial setup = 1 s
[2025-06-03 07:55:01] 2025-06-03 05:54:41,857 | INFO     | . payload setup = 7 s
[2025-06-03 07:55:01] 2025-06-03 05:54:41,857 | INFO     | . stage-in = 0 s
[2025-06-03 07:55:01] 2025-06-03 05:54:41,857 | INFO     | . payload execution = 6719 s
[2025-06-03 07:55:01] 2025-06-03 05:54:41,857 | INFO     | . stage-out = 0 s
[2025-06-03 07:55:01] 2025-06-03 05:54:41,857 | INFO     | . log creation = 0 s
[2025-06-03 07:55:01] 2025-06-03 05:54:41,857 | INFO     | ..............................
[2025-06-03 07:55:01] 2025-06-03 05:54:42,071 | INFO     | 
[2025-06-03 07:55:01] 2025-06-03 05:54:42,071 | INFO     | job summary report
[2025-06-03 07:55:01] 2025-06-03 05:54:42,072 | INFO     | --------------------------------------------------
[2025-06-03 07:55:01] 2025-06-03 05:54:42,072 | INFO     | PanDA job id: 6677402158
[2025-06-03 07:55:01] 2025-06-03 05:54:42,072 | INFO     | task id: 45006595
[2025-06-03 07:55:01] 2025-06-03 05:54:42,072 | INFO     | errors: (none)
[2025-06-03 07:55:01] 2025-06-03 05:54:42,072 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 07:55:01] 2025-06-03 05:54:42,072 | INFO     | pilot state: finished 
[2025-06-03 07:55:01] 2025-06-03 05:54:42,073 | INFO     | transexitcode: 0
[2025-06-03 07:55:01] 2025-06-03 05:54:42,073 | INFO     | exeerrorcode: 0
[2025-06-03 07:55:01] 2025-06-03 05:54:42,073 | INFO     | exeerrordiag: 
[2025-06-03 07:55:01] 2025-06-03 05:54:42,073 | INFO     | exitcode: 0
[2025-06-03 07:55:01] 2025-06-03 05:54:42,073 | INFO     | exitmsg: OK
[2025-06-03 07:55:01] 2025-06-03 05:54:42,073 | INFO     | cpuconsumptiontime: 13036 s
[2025-06-03 07:55:01] 2025-06-03 05:54:42,073 | INFO     | nevents: 400
[2025-06-03 07:55:01] 2025-06-03 05:54:42,074 | INFO     | neventsw: 0
[2025-06-03 07:55:01] 2025-06-03 05:54:42,074 | INFO     | pid: 927451
[2025-06-03 07:55:01] 2025-06-03 05:54:42,074 | INFO     | pgrp: 927451
[2025-06-03 07:55:01] 2025-06-03 05:54:42,074 | INFO     | corecount: 2
[2025-06-03 07:55:01] 2025-06-03 05:54:42,074 | INFO     | event service: False
[2025-06-03 07:55:01] 2025-06-03 05:54:42,074 | INFO     | sizes: {0: 2405185, 6: 2405391, 11: 2405419, 6731: 2432511, 6733: 2441458, 6734: 2441514, 6742: 2441812}
[2025-06-03 07:55:01] 2025-06-03 05:54:42,074 | INFO     | --------------------------------------------------
[2025-06-03 07:55:01] 2025-06-03 05:54:42,075 | INFO     | 
[2025-06-03 07:55:01] 2025-06-03 05:54:42,075 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-03 07:55:01] 2025-06-03 05:54:42,086 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,086 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,086 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,086 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,086 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,086 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,086 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,086 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,086 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,086 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,086 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,086 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,086 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,086 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,087 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,087 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,087 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 07:55:01] 2025-06-03 05:54:42,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,087 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 07:55:01] 2025-06-03 05:54:42,087 | INFO     | job 6677402158 has completed (purged errors)
[2025-06-03 07:55:01] 2025-06-03 05:54:42,087 | INFO     | overall cleanup function is called
[2025-06-03 07:55:01] 2025-06-03 05:54:42,792 | INFO     | PID=920966 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-03 07:55:01] 2025-06-03 05:54:43,093 | INFO     | --- collectZombieJob: --- 10, [927451]
[2025-06-03 07:55:01] 2025-06-03 05:54:43,093 | INFO     | zombie collector waiting for pid 927451
[2025-06-03 07:55:01] 2025-06-03 05:54:43,093 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 07:55:01] 2025-06-03 05:54:43,093 | INFO     | collected zombie processes
[2025-06-03 07:55:01] 2025-06-03 05:54:43,094 | INFO     | will attempt to kill all subprocesses of pid=927451
[2025-06-03 07:55:01] 2025-06-03 05:54:43,127 | INFO     | process IDs to be killed: [927451] (in reverse order)
[2025-06-03 07:55:01] 2025-06-03 05:54:43,148 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 07:55:01] 2025-06-03 05:54:43,149 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 07:55:01] 2025-06-03 05:54:43,149 | INFO     | did not find any defunct processes belonging to 927451
[2025-06-03 07:55:01] 2025-06-03 05:54:43,150 | INFO     | did not find any defunct processes belonging to 927451
[2025-06-03 07:55:01] 2025-06-03 05:54:43,150 | INFO     | ready for new job
[2025-06-03 07:55:01] 2025-06-03 05:54:43,150 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 07:55:01] 2025-06-03 05:54:43,151 | INFO     | **************************************
[2025-06-03 07:55:01] 2025-06-03 05:54:43,151 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 07:55:01] 2025-06-03 05:54:43,151 | INFO     | **************************************
[2025-06-03 07:55:01] 2025-06-03 05:54:43,151 | INFO     | 
[2025-06-03 07:55:01] 2025-06-03 05:54:43,151 | INFO     | architecture information:
[2025-06-03 07:55:01] 2025-06-03 05:54:43,151 | INFO     | executing command: cat /etc/os-release
[2025-06-03 07:55:01] 2025-06-03 05:54:43,159 | INFO     | cat /etc/os-release:
[2025-06-03 07:55:01] NAME="CentOS Linux"
[2025-06-03 07:55:01] VERSION="7 (Core)"
[2025-06-03 07:55:01] ID="centos"
[2025-06-03 07:55:01] ID_LIKE="rhel fedora"
[2025-06-03 07:55:01] VERSION_ID="7"
[2025-06-03 07:55:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 07:55:01] ANSI_COLOR="0;31"
[2025-06-03 07:55:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 07:55:01] HOME_URL="https://www.centos.org/"
[2025-06-03 07:55:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 07:55:01] 
[2025-06-03 07:55:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 07:55:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 07:55:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 07:55:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 07:55:01] 
[2025-06-03 07:55:01] 2025-06-03 05:54:43,160 | INFO     | **************************************
[2025-06-03 07:55:01] 2025-06-03 05:54:43,663 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-03 07:55:01] 2025-06-03 05:54:43,675 | INFO     | sufficient remaining disk space (489208938496 B)
[2025-06-03 07:55:01] 2025-06-03 05:54:43,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 07:55:01] 2025-06-03 05:54:43,675 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 07:55:01] 2025-06-03 05:54:43,675 | INFO     | update_server=False
[2025-06-03 07:55:01] 2025-06-03 05:54:43,675 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 07:55:01] 2025-06-03 05:54:43,675 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 07:55:01] 2025-06-03 05:54:43,675 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 07:55:01] 2025-06-03 05:54:43,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 07:55:01] 2025-06-03 05:54:43,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 07:55:01] 2025-06-03 05:54:43,675 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:55:01] 2025-06-03 05:54:43,675 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 07:55:01] 2025-06-03 05:54:43,675 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:55:01] 2025-06-03 05:54:43,676 | INFO     | aborting loop
[2025-06-03 07:55:01] 2025-06-03 05:54:44,302 | INFO     | all data control threads have been joined
[2025-06-03 07:55:01] 2025-06-03 05:54:44,431 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 07:55:01] 2025-06-03 05:54:44,680 | INFO     | [job] retrieve thread has finished
[2025-06-03 07:55:01] 2025-06-03 05:54:44,681 | INFO     | [job] job monitor thread has finished
[2025-06-03 07:55:01] 2025-06-03 05:54:44,682 | INFO     | [job] queue monitor thread has finished
[2025-06-03 07:55:01] 2025-06-03 05:54:44,686 | INFO     | all payload control threads have been joined
[2025-06-03 07:55:01] 2025-06-03 05:54:44,982 | INFO     | [payload] validate_post thread has finished
[2025-06-03 07:55:01] 2025-06-03 05:54:45,038 | INFO     | all job control threads have been joined
[2025-06-03 07:55:01] 2025-06-03 05:54:45,308 | INFO     | [data] control thread has finished
[2025-06-03 07:55:01] 2025-06-03 05:54:45,459 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 07:55:01] 2025-06-03 05:54:45,682 | INFO     | [data] copytool_out thread has finished
[2025-06-03 07:55:01] 2025-06-03 05:54:45,692 | INFO     | [payload] control thread has finished
[2025-06-03 07:55:01] 2025-06-03 05:54:45,943 | INFO     | [job] validate thread has finished
[2025-06-03 07:55:01] 2025-06-03 05:54:46,013 | INFO     | [payload] failed_post thread has finished
[2025-06-03 07:55:01] 2025-06-03 05:54:46,024 | INFO     | [data] copytool_in thread has finished
[2025-06-03 07:55:01] 2025-06-03 05:54:46,025 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 07:55:01] 2025-06-03 05:54:46,044 | INFO     | [job] control thread has finished
[2025-06-03 07:55:01] 2025-06-03 05:54:46,156 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 07:55:01] 2025-06-03 05:54:48,438 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 07:55:01] 2025-06-03 05:54:53,986 | INFO     | job.realtimelogging is not enabled
[2025-06-03 07:55:01] 2025-06-03 05:54:54,992 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 07:55:01] 2025-06-03 05:54:56,044 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139912847734592)>', '<ExcThread(monitor, started 139912359692032)>']
[2025-06-03 07:55:01] 2025-06-03 05:54:56,739 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 07:55:01] 2025-06-03 05:54:56,739 | INFO     | [monitor] control thread has ended
[2025-06-03 07:55:01] 2025-06-03 05:55:01,071 | INFO     | all workflow threads have been joined
[2025-06-03 07:55:01] 2025-06-03 05:55:01,071 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 07:55:01] 2025-06-03 05:55:01,071 | INFO     | traces error code: 0
[2025-06-03 07:55:01] 2025-06-03 05:55:01,072 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 07:55:01] 2025-06-03 05:55:01,113 [wrapper] ==== pilot stdout END ====
[2025-06-03 07:55:01] 2025-06-03 05:55:01,116 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 07:55:01] 2025-06-03 05:55:01,119 [wrapper] pilotpid: 920966
[2025-06-03 07:55:01] 2025-06-03 05:55:01,121 [wrapper] Pilot exit status: 0
[2025-06-03 07:55:01] 2025-06-03 05:55:01,128 [wrapper] pandaids: 6677402158
[2025-06-03 07:55:01] 2025-06-03 05:55:01,141 [wrapper] cleanup supervisor_pilot  943571 920967
[2025-06-03 07:55:01] 2025-06-03 05:55:01,144 [wrapper] Test setup, not cleaning
[2025-06-03 07:55:01] 2025-06-03 05:55:01,146 [wrapper] apfmon messages muted
[2025-06-03 07:55:01] 2025-06-03 05:55:01,148 [wrapper] ==== wrapper stdout END ====
[2025-06-03 07:55:01] 2025-06-03 05:55:01,150 [wrapper] ==== wrapper stderr END ====
[2025-06-03 07:55:01]  *** Error codes and diagnostics ***
[2025-06-03 07:55:01]     "exeErrorCode": 0,
[2025-06-03 07:55:01]     "exeErrorDiag": "",
[2025-06-03 07:55:01]     "pilotErrorCode": 0,
[2025-06-03 07:55:01]     "pilotErrorDiag": "",
[2025-06-03 07:55:01]  *** Listing of results directory ***
[2025-06-03 07:55:01] total 391168
[2025-06-03 07:55:01] -rw-r--r-- 1 boinc boinc    495897 Jun  2 23:29 pilot3.tar.gz
[2025-06-03 07:55:01] -rw-r--r-- 1 boinc boinc      5111 Jun  2 23:39 queuedata.json
[2025-06-03 07:55:01] -rwx------ 1 boinc boinc     37140 Jun  2 23:39 runpilot2-wrapper.sh
[2025-06-03 07:55:01] -rw-r--r-- 1 boinc boinc       100 Jun  3 06:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 07:55:01] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 06:01 run_atlas
[2025-06-03 07:55:01] -rw-r--r-- 1 boinc boinc       105 Jun  3 06:01 job.xml
[2025-06-03 07:55:01] -rw-r--r-- 2 boinc boinc 215337103 Jun  3 06:01 EVNT.45006593._000503.pool.root.1
[2025-06-03 07:55:01] -rw-r--r-- 1 boinc boinc      6689 Jun  3 06:01 init_data.xml
[2025-06-03 07:55:01] drwxrwx--x 2 boinc boinc      4096 Jun  3 06:01 shared
[2025-06-03 07:55:01] -rw-r--r-- 2 boinc boinc    508878 Jun  3 06:01 input.tar.gz
[2025-06-03 07:55:01] -rw-r--r-- 2 boinc boinc     15093 Jun  3 06:01 start_atlas.sh
[2025-06-03 07:55:01] -rw-r--r-- 1 boinc boinc         0 Jun  3 06:01 boinc_lockfile
[2025-06-03 07:55:01] -rw-r--r-- 1 boinc boinc      2524 Jun  3 06:01 pandaJob.out
[2025-06-03 07:55:01] -rw------- 1 boinc boinc    988073 Jun  3 06:02 agis_schedconf.cvmfs.json
[2025-06-03 07:55:01] -rw------- 1 boinc boinc   1603667 Jun  3 06:02 agis_ddmendpoints.agis.ALL.json
[2025-06-03 07:55:01] drwx------ 4 boinc boinc      4096 Jun  3 06:02 pilot3
[2025-06-03 07:55:01] -rw-r--r-- 1 boinc boinc       530 Jun  3 07:54 boinc_task_state.xml
[2025-06-03 07:55:01] -rw------- 1 boinc boinc 179637393 Jun  3 07:54 HITS.45006595._012563.pool.root.1
[2025-06-03 07:55:01] -rw------- 1 boinc boinc      1016 Jun  3 07:54 memory_monitor_summary.json
[2025-06-03 07:55:01] -rw------- 1 boinc boinc        95 Jun  3 07:54 pilot_heartbeat.json
[2025-06-03 07:55:01] -rw------- 1 boinc boinc    229154 Jun  3 07:54 log.45006595._012563.job.log.tgz.1
[2025-06-03 07:55:01] -rw------- 1 boinc boinc      7655 Jun  3 07:54 heartbeat.json
[2025-06-03 07:55:01] -rw-r--r-- 1 boinc boinc      8192 Jun  3 07:54 boinc_mmap_file
[2025-06-03 07:55:01] -rw-r--r-- 1 boinc boinc        27 Jun  3 07:54 wrapper_checkpoint.txt
[2025-06-03 07:55:01] -rw------- 1 boinc boinc      4552 Jun  3 07:55 pilotlog.txt
[2025-06-03 07:55:01] -rw------- 1 boinc boinc    640300 Jun  3 07:55 log.45006595._012563.job.log.1
[2025-06-03 07:55:01] -rw------- 1 boinc boinc       357 Jun  3 07:55 output.list
[2025-06-03 07:55:01] -rw-r--r-- 1 boinc boinc       620 Jun  3 07:55 runtime_log
[2025-06-03 07:55:01] -rw------- 1 boinc boinc    890880 Jun  3 07:55 result.tar.gz
[2025-06-03 07:55:01] -rw-r--r-- 1 boinc boinc      8738 Jun  3 07:55 runtime_log.err
[2025-06-03 07:55:01] -rw------- 1 boinc boinc       660 Jun  3 07:55 fVDMDmN3Rg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMgWKDmTPu6Lm.diag
[2025-06-03 07:55:01] -rw-r--r-- 1 boinc boinc     20869 Jun  3 07:55 stderr.txt
[2025-06-03 07:55:01] HITS file was successfully produced:
[2025-06-03 07:55:01] -rw------- 1 boinc boinc 179637393 Jun  3 07:54 shared/HITS.pool.root.1
[2025-06-03 07:55:01]  *** Contents of shared directory: ***
[2025-06-03 07:55:01] total 387116
[2025-06-03 07:55:01] -rw-r--r-- 2 boinc boinc 215337103 Jun  3 06:01 ATLAS.root_0
[2025-06-03 07:55:01] -rw-r--r-- 2 boinc boinc    508878 Jun  3 06:01 input.tar.gz
[2025-06-03 07:55:01] -rw-r--r-- 2 boinc boinc     15093 Jun  3 06:01 start_atlas.sh
[2025-06-03 07:55:01] -rw------- 1 boinc boinc 179637393 Jun  3 07:54 HITS.pool.root.1
[2025-06-03 07:55:01] -rw------- 1 boinc boinc    890880 Jun  3 07:55 result.tar.gz
07:55:02 (917341): run_atlas exited; CPU time 13064.374279
07:55:02 (917341): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN