Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:37:17 (2508216): wrapper (7.7.26015): starting
16:37:17 (2508216): wrapper: running run_atlas (--nthreads 12)
[2025-06-02 16:37:17] Arguments: --nthreads 12
[2025-06-02 16:37:17] Threads: 12
[2025-06-02 16:37:17] Checking for CVMFS
[2025-06-02 16:37:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 16:37:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 16:37:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 16:37:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 16:37:18] 2.11.5.0 1435708 30910 234204 146723 3 228 23092506 45568000 14010 130560 0 262550228 99.768 185818871 23203 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-02 16:37:18] CVMFS is ok
[2025-06-02 16:37:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 16:37:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 16:37:18] Further information can be found at the LHC@home message board.
[2025-06-02 16:37:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 16:37:18] Checking for apptainer binary...
[2025-06-02 16:37:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 16:37:19] Running /usr/bin/apptainer --version
[2025-06-02 16:37:19] apptainer version 1.4.0-1.el9
[2025-06-02 16:37:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 16:37:20] wns0166.triumf.lcg
[2025-06-02 16:37:20] apptainer works
[2025-06-02 16:37:20] Set ATHENA_PROC_NUMBER=12
[2025-06-02 16:37:20] Set ATHENA_CORE_NUMBER=12
[2025-06-02 16:37:20] Starting ATLAS job with PandaID=6677401894
[2025-06-02 16:37:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 16:41:22]  *** The last 200 lines of the pilot log: ***
[2025-06-02 16:41:22] 2025-06-02 23:41:08,603 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 16:41:22] 2025-06-02 23:41:08,603 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 16:41:22] 2025-06-02 23:41:08,603 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 16:41:22] 2025-06-02 23:41:08,604 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 16:41:22] 2025-06-02 23:41:08,604 | WARNING  | found no stored workdir sizes
[2025-06-02 16:41:22] 2025-06-02 23:41:08,604 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 16:41:22] 2025-06-02 23:41:08,604 | WARNING  | wrong length of table data, x=[1748907515.0], y=[2106.0] (must be same and length>=4)
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | ..............................
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . Timing measurements:
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . get job = 0 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . initial setup = 4 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . payload setup = 10 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . stage-in = 0 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . payload execution = 26 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . stage-out = 0 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . log creation = 0 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | ..............................
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 16:41:22] 2025-06-02 23:41:08,606 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677401894/pilotlog.txt
[2025-06-02 16:41:22] 2025-06-02 23:41:08,619 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 16:41:22] - Log from pilotlog.txt -
[2025-06-02 16:41:22] 2025-06-02 23:41:08,603 | INFO     | extracted standard info from prmon json
[2025-06-02 16:41:22] 2025-06-02 23:41:08,603 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 16:41:22] 2025-06-02 23:41:08,603 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 16:41:22] 2025-06-02 23:41:08,603 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 16:41:22] 2025-06-02 23:41:08,604 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 16:41:22] 2025-06-02 23:41:08,604 | WARNING  | found no stored workdir sizes
[2025-06-02 16:41:22] 2025-06-02 23:41:08,604 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 16:41:22] 2025-06-02 23:41:08,604 | WARNING  | wrong length of table data, x=[1748907515.0], y=[2106.0] (must be same and length>=4)
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | ..............................
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . Timing measurements:
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . get job = 0 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . initial setup = 4 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . payload setup = 10 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . stage-in = 0 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . payload execution = 26 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . stage-out = 0 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . log creation = 0 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | ..............................
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 16:41:22] 2025-06-02 23:41:08,606 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677401894/pilotlog.txt
[2025-06-02 16:41:22] 2025-06-02 23:41:08,620 | WARNING  | 
[2025-06-02 16:41:22] [begin log extracts]
[2025-06-02 16:41:22] - Log from pilotlog.txt -
[2025-06-02 16:41:22] 2025-06-02 23:41:08,603 | INFO     | extracted standard info from prmon json
[2025-06-02 16:41:22] 2025-06-02 23:41:08,603 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 16:41:22] 2025-06-02 23:41:08,603 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 16:41:22] 2025-06-02 23:41:08,603 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 16:41:22] 2025-06-02 23:41:08,604 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 16:41:22] 2025-06-02 23:41:08,604 | WARNING  | found no stored workdir sizes
[2025-06-02 16:41:22] 2025-06-02 23:41:08,604 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 16:41:22] 2025-06-02 23:41:08,604 | WARNING  | wrong length of table data, x=[1748907515.0], y=[2106.0] (must be same and length>=4)
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | ..............................
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . Timing measurements:
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . get job = 0 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . initial setup = 4 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . payload setup = 10 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . stage-in = 0 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . payload execution = 26 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . stage-out = 0 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | . log creation = 0 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | ..............................
[2025-06-02 16:41:22] 2025-06-02 23:41:08,605 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 16:41:22] 2025-06-02 23:41:08,606 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677401894/pilotlog.txt
[2025-06-02 16:41:22] [end log extracts]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,620 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 16:41:22] 2025-06-02 23:41:08,621 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 16:41:22] 2025-06-02 23:41:08,695 | INFO     | 
[2025-06-02 16:41:22] 2025-06-02 23:41:08,696 | INFO     | job summary report
[2025-06-02 16:41:22] 2025-06-02 23:41:08,696 | INFO     | --------------------------------------------------
[2025-06-02 16:41:22] 2025-06-02 23:41:08,696 | INFO     | PanDA job id: 6677401894
[2025-06-02 16:41:22] 2025-06-02 23:41:08,696 | INFO     | task id: 45006595
[2025-06-02 16:41:22] 2025-06-02 23:41:08,696 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 16:38:48,393 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 16:41:22] 2025-06-02 23:41:08,696 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 16:41:22] 2025-06-02 23:41:08,696 | INFO     | pilot state: failed 
[2025-06-02 16:41:22] 2025-06-02 23:41:08,696 | INFO     | transexitcode: 65
[2025-06-02 16:41:22] 2025-06-02 23:41:08,696 | INFO     | exeerrorcode: 65
[2025-06-02 16:41:22] 2025-06-02 23:41:08,696 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 16:41:22] 2025-06-02 23:41:08,696 | INFO     | exitcode: 65
[2025-06-02 16:41:22] 2025-06-02 23:41:08,696 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 16:41:22] 2025-06-02 23:41:08,696 | INFO     | cpuconsumptiontime: 19 s
[2025-06-02 16:41:22] 2025-06-02 23:41:08,697 | INFO     | nevents: 0
[2025-06-02 16:41:22] 2025-06-02 23:41:08,697 | INFO     | neventsw: 0
[2025-06-02 16:41:22] 2025-06-02 23:41:08,697 | INFO     | pid: 2521662
[2025-06-02 16:41:22] 2025-06-02 23:41:08,697 | INFO     | pgrp: 2521662
[2025-06-02 16:41:22] 2025-06-02 23:41:08,697 | INFO     | corecount: 12
[2025-06-02 16:41:22] 2025-06-02 23:41:08,697 | INFO     | event service: False
[2025-06-02 16:41:22] 2025-06-02 23:41:08,697 | INFO     | sizes: {0: 2405179, 11: 2405413, 22: 2405413, 41: 2432740, 44: 2432740, 172: 2432882}
[2025-06-02 16:41:22] 2025-06-02 23:41:08,697 | INFO     | --------------------------------------------------
[2025-06-02 16:41:22] 2025-06-02 23:41:08,697 | INFO     | 
[2025-06-02 16:41:22] 2025-06-02 23:41:08,697 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 16:41:22] 2025-06-02 23:41:08,727 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,728 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,728 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,728 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,728 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,728 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,728 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,728 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,729 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,729 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,729 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,729 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,729 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,729 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,729 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,729 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,729 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,729 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 16:41:22] 2025-06-02 23:41:08,729 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,729 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 16:41:22] 2025-06-02 23:41:08,729 | INFO     | job 6677401894 has completed (purged errors)
[2025-06-02 16:41:22] 2025-06-02 23:41:08,730 | INFO     | overall cleanup function is called
[2025-06-02 16:41:22] 2025-06-02 23:41:09,736 | INFO     | --- collectZombieJob: --- 10, [2521662]
[2025-06-02 16:41:22] 2025-06-02 23:41:09,737 | INFO     | zombie collector waiting for pid 2521662
[2025-06-02 16:41:22] 2025-06-02 23:41:09,737 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 16:41:22] 2025-06-02 23:41:09,738 | INFO     | collected zombie processes
[2025-06-02 16:41:22] 2025-06-02 23:41:09,738 | INFO     | will attempt to kill all subprocesses of pid=2521662
[2025-06-02 16:41:22] 2025-06-02 23:41:09,969 | INFO     | process IDs to be killed: [2521662] (in reverse order)
[2025-06-02 16:41:22] 2025-06-02 23:41:10,038 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 16:41:22] 2025-06-02 23:41:10,038 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 16:41:22] 2025-06-02 23:41:10,076 | INFO     | did not find any defunct processes belonging to 2521662
[2025-06-02 16:41:22] 2025-06-02 23:41:10,094 | INFO     | did not find any defunct processes belonging to 2521662
[2025-06-02 16:41:22] 2025-06-02 23:41:10,095 | INFO     | ready for new job
[2025-06-02 16:41:22] 2025-06-02 23:41:10,095 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 16:41:22] 2025-06-02 23:41:10,104 | INFO     | **************************************
[2025-06-02 16:41:22] 2025-06-02 23:41:10,104 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 16:41:22] 2025-06-02 23:41:10,104 | INFO     | **************************************
[2025-06-02 16:41:22] 2025-06-02 23:41:10,104 | INFO     | 
[2025-06-02 16:41:22] 2025-06-02 23:41:10,107 | INFO     | architecture information:
[2025-06-02 16:41:22] 2025-06-02 23:41:10,135 | INFO     | executing command: cat /etc/os-release
[2025-06-02 16:41:22] 2025-06-02 23:41:10,181 | INFO     | cat /etc/os-release:
[2025-06-02 16:41:22] NAME="CentOS Linux"
[2025-06-02 16:41:22] VERSION="7 (Core)"
[2025-06-02 16:41:22] ID="centos"
[2025-06-02 16:41:22] ID_LIKE="rhel fedora"
[2025-06-02 16:41:22] VERSION_ID="7"
[2025-06-02 16:41:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 16:41:22] ANSI_COLOR="0;31"
[2025-06-02 16:41:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 16:41:22] HOME_URL="https://www.centos.org/"
[2025-06-02 16:41:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 16:41:22] 
[2025-06-02 16:41:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 16:41:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 16:41:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 16:41:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 16:41:22] 
[2025-06-02 16:41:22] 2025-06-02 23:41:10,181 | INFO     | **************************************
[2025-06-02 16:41:22] 2025-06-02 23:41:10,686 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 16:41:22] 2025-06-02 23:41:10,755 | INFO     | sufficient remaining disk space (1909904637952 B)
[2025-06-02 16:41:22] 2025-06-02 23:41:10,756 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 16:41:22] 2025-06-02 23:41:10,756 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 16:41:22] 2025-06-02 23:41:10,756 | INFO     | update_server=False
[2025-06-02 16:41:22] 2025-06-02 23:41:10,756 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 16:41:22] 2025-06-02 23:41:10,756 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-02 16:41:22] 2025-06-02 23:41:10,757 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 16:41:22] 2025-06-02 23:41:10,757 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 16:41:22] 2025-06-02 23:41:10,757 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 16:41:22] 2025-06-02 23:41:10,759 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 16:41:22] 2025-06-02 23:41:10,760 | INFO     | aborting loop
[2025-06-02 16:41:22] 2025-06-02 23:41:10,772 | INFO     | all data control threads have been joined
[2025-06-02 16:41:22] 2025-06-02 23:41:11,155 | INFO     | all job control threads have been joined
[2025-06-02 16:41:22] 2025-06-02 23:41:11,184 | INFO     | all payload control threads have been joined
[2025-06-02 16:41:22] 2025-06-02 23:41:11,314 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 16:41:22] 2025-06-02 23:41:11,762 | INFO     | [job] retrieve thread has finished
[2025-06-02 16:41:22] 2025-06-02 23:41:11,766 | INFO     | [job] job monitor thread has finished
[2025-06-02 16:41:22] 2025-06-02 23:41:11,778 | INFO     | [data] control thread has finished
[2025-06-02 16:41:22] 2025-06-02 23:41:11,803 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 16:41:22] 2025-06-02 23:41:12,009 | INFO     | [payload] failed_post thread has finished
[2025-06-02 16:41:22] 2025-06-02 23:41:12,161 | INFO     | [job] control thread has finished
[2025-06-02 16:41:22] 2025-06-02 23:41:12,190 | INFO     | [payload] control thread has finished
[2025-06-02 16:41:22] 2025-06-02 23:41:12,306 | INFO     | [payload] validate_post thread has finished
[2025-06-02 16:41:22] 2025-06-02 23:41:12,327 | INFO     | [job] validate thread has finished
[2025-06-02 16:41:22] 2025-06-02 23:41:12,441 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 16:41:22] 2025-06-02 23:41:12,460 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 16:41:22] 2025-06-02 23:41:12,715 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 16:41:22] 2025-06-02 23:41:12,722 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 16:41:22] 2025-06-02 23:41:12,849 | INFO     | [data] copytool_in thread has finished
[2025-06-02 16:41:22] 2025-06-02 23:41:13,321 | INFO     | [data] copytool_out thread has finished
[2025-06-02 16:41:22] 2025-06-02 23:41:13,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 16:41:22] 2025-06-02 23:41:14,716 | INFO     | [job] queue monitor thread has finished
[2025-06-02 16:41:22] 2025-06-02 23:41:16,724 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 16:41:22] 2025-06-02 23:41:16,984 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140367755065152)>', '<ExcThread(monitor, started 140366711879424)>']
[2025-06-02 16:41:22] 2025-06-02 23:41:17,798 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 16:41:22] 2025-06-02 23:41:17,799 | INFO     | [monitor] control thread has ended
[2025-06-02 16:41:22] 2025-06-02 23:41:22,010 | INFO     | all workflow threads have been joined
[2025-06-02 16:41:22] 2025-06-02 23:41:22,011 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 16:41:22] 2025-06-02 23:41:22,011 | INFO     | traces error code: 0
[2025-06-02 16:41:22] 2025-06-02 23:41:22,011 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 16:41:22] 2025-06-02 23:41:22,392 [wrapper] ==== pilot stdout END ====
[2025-06-02 16:41:22] 2025-06-02 23:41:22,400 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 16:41:22] 2025-06-02 23:41:22,403 [wrapper] pilotpid: 2511776
[2025-06-02 16:41:22] 2025-06-02 23:41:22,405 [wrapper] Pilot exit status: 0
[2025-06-02 16:41:22] 2025-06-02 23:41:22,425 [wrapper] pandaids: 6677401894
[2025-06-02 16:41:22] 2025-06-02 23:41:22,469 [wrapper] cleanup supervisor_pilot 2511782 2511777
[2025-06-02 16:41:22] 2025-06-02 23:41:22,472 [wrapper] Test setup, not cleaning
[2025-06-02 16:41:22] 2025-06-02 23:41:22,475 [wrapper] apfmon messages muted
[2025-06-02 16:41:22] 2025-06-02 23:41:22,477 [wrapper] ==== wrapper stdout END ====
[2025-06-02 16:41:22] 2025-06-02 23:41:22,480 [wrapper] ==== wrapper stderr END ====
[2025-06-02 16:41:22]  *** Error codes and diagnostics ***
[2025-06-02 16:41:22]     "exeErrorCode": 65,
[2025-06-02 16:41:22]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 16:41:22]     "pilotErrorCode": 1305,
[2025-06-02 16:41:22]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 16:41:22]  *** Listing of results directory ***
[2025-06-02 16:41:22] total 214888
[2025-06-02 16:41:22] -rw-r--r--. 1 boinc boinc    495897 Jun  2 14:10 pilot3.tar.gz
[2025-06-02 16:41:22] -rwx------. 1 boinc boinc     37140 Jun  2 14:29 runpilot2-wrapper.sh
[2025-06-02 16:41:22] -rw-r--r--. 1 boinc boinc      5111 Jun  2 14:29 queuedata.json
[2025-06-02 16:41:22] -rw-r--r--. 1 boinc boinc       100 Jun  2 16:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 16:41:22] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 16:37 run_atlas
[2025-06-02 16:41:22] -rw-r--r--. 1 boinc boinc       105 Jun  2 16:37 job.xml
[2025-06-02 16:41:22] -rw-r--r--. 1 boinc boinc      6597 Jun  2 16:37 init_data.xml
[2025-06-02 16:41:22] -rw-r--r--. 2 boinc boinc 216016929 Jun  2 16:37 EVNT.45006593._000494.pool.root.1
[2025-06-02 16:41:22] -rw-r--r--. 2 boinc boinc     15093 Jun  2 16:37 start_atlas.sh
[2025-06-02 16:41:22] drwxrwx--x. 2 boinc boinc      4096 Jun  2 16:37 shared
[2025-06-02 16:41:22] -rw-r--r--. 2 boinc boinc    508864 Jun  2 16:37 input.tar.gz
[2025-06-02 16:41:22] -rw-r--r--. 1 boinc boinc         0 Jun  2 16:37 boinc_lockfile
[2025-06-02 16:41:22] -rw-r--r--. 1 boinc boinc      2524 Jun  2 16:37 pandaJob.out
[2025-06-02 16:41:22] -rw-------. 1 boinc boinc    988081 Jun  2 16:37 agis_schedconf.cvmfs.json
[2025-06-02 16:41:22] -rw-------. 1 boinc boinc   1603667 Jun  2 16:37 agis_ddmendpoints.agis.ALL.json
[2025-06-02 16:41:22] drwx------. 4 boinc boinc      4096 Jun  2 16:37 pilot3
[2025-06-02 16:41:22] -rw-------. 1 boinc boinc       960 Jun  2 16:38 memory_monitor_summary.json
[2025-06-02 16:41:22] -rw-r--r--. 1 boinc boinc       522 Jun  2 16:38 boinc_task_state.xml
[2025-06-02 16:41:22] -rw-------. 1 boinc boinc     20521 Jun  2 16:38 log.45006595._012348.job.log.tgz.1
[2025-06-02 16:41:22] -rw-------. 1 boinc boinc        95 Jun  2 16:40 pilot_heartbeat.json
[2025-06-02 16:41:22] -rw-------. 1 boinc boinc      8302 Jun  2 16:41 heartbeat.json
[2025-06-02 16:41:22] -rw-r--r--. 1 boinc boinc      8192 Jun  2 16:41 boinc_mmap_file
[2025-06-02 16:41:22] -rw-r--r--. 1 boinc boinc        22 Jun  2 16:41 wrapper_checkpoint.txt
[2025-06-02 16:41:22] -rw-------. 1 boinc boinc      4475 Jun  2 16:41 pilotlog.txt
[2025-06-02 16:41:22] -rw-------. 1 boinc boinc     75596 Jun  2 16:41 log.45006595._012348.job.log.1
[2025-06-02 16:41:22] -rw-------. 1 boinc boinc       188 Jun  2 16:41 output.list
[2025-06-02 16:41:22] -rw-r--r--. 1 boinc boinc       620 Jun  2 16:41 runtime_log
[2025-06-02 16:41:22] -rw-------. 1 boinc boinc    112640 Jun  2 16:41 result.tar.gz
[2025-06-02 16:41:22] -rw-r--r--. 1 boinc boinc      8484 Jun  2 16:41 runtime_log.err
[2025-06-02 16:41:22] -rw-------. 1 boinc boinc       645 Jun  2 16:41 IJDMDm7tRg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm4fWKDmxWrnkn.diag
[2025-06-02 16:41:22] -rw-r--r--. 1 boinc boinc     21476 Jun  2 16:41 stderr.txt
[2025-06-02 16:41:22] No HITS result produced
[2025-06-02 16:41:22]  *** Contents of shared directory: ***
[2025-06-02 16:41:22] total 211584
[2025-06-02 16:41:22] -rw-r--r--. 2 boinc boinc 216016929 Jun  2 16:37 ATLAS.root_0
[2025-06-02 16:41:22] -rw-r--r--. 2 boinc boinc     15093 Jun  2 16:37 start_atlas.sh
[2025-06-02 16:41:22] -rw-r--r--. 2 boinc boinc    508864 Jun  2 16:37 input.tar.gz
[2025-06-02 16:41:22] -rw-------. 1 boinc boinc    112640 Jun  2 16:41 result.tar.gz
16:41:23 (2508216): run_atlas exited; CPU time 25.591800
16:41:23 (2508216): called boinc_finish(0)

</stderr_txt>
]]>

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