Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:53:55 (833): wrapper (7.7.26015): starting
08:53:55 (833): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 08:53:55] Arguments: --nthreads 8
[2025-06-03 08:53:55] Threads: 8
[2025-06-03 08:53:55] Checking for CVMFS
[2025-06-03 08:53:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 08:53:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 08:53:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 08:53:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 08:53:58] 2.11.2.0 19466 31433 90524 146731 1 59 23146660 25165825 4636 130560 0 16014266 99.848 16903033 1963 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 08:53:58] CVMFS is ok
[2025-06-03 08:53:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:53:58] Checking for apptainer binary...
[2025-06-03 08:53:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 08:53:58] Running /usr/bin/apptainer --version
[2025-06-03 08:53:58] apptainer version 1.3.2-1.el7
[2025-06-03 08:53:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:54:05] cg-vwn426.simple-grid.lan
[2025-06-03 08:54:05] apptainer works
[2025-06-03 08:54:05] Set ATHENA_PROC_NUMBER=8
[2025-06-03 08:54:05] Set ATHENA_CORE_NUMBER=8
[2025-06-03 08:54:06] Starting ATLAS job with PandaID=6677396831
[2025-06-03 08:54:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:55:24]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:55:24] 2025-06-03 10:47:05,486 | INFO     | extracted standard info from prmon json
[2025-06-03 12:55:24] 2025-06-03 10:47:05,486 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:55:24] 2025-06-03 10:47:05,486 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:55:24] 2025-06-03 10:47:05,487 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:55:24] 2025-06-03 10:47:05,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:55:24] 2025-06-03 10:47:05,492 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:55:24] 2025-06-03 10:47:05,492 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 12:55:24] 2025-06-03 10:47:05,494 | INFO     | sum of deviations: 99899958731.49998
[2025-06-03 12:55:24] 2025-06-03 10:47:05,494 | INFO     | mean x: 1748940926.5
[2025-06-03 12:55:24] 2025-06-03 10:47:05,494 | INFO     | mean y: 2403213.0416666665
[2025-06-03 12:55:24] 2025-06-03 10:47:05,494 | INFO     | -- intersect: -55910247343.46923
[2025-06-03 12:55:24] 2025-06-03 10:47:05,494 | INFO     | intersect: -55910247343.46923
[2025-06-03 12:55:24] 2025-06-03 10:47:05,495 | INFO     | chi2: 8.207742112218105
[2025-06-03 12:55:24] 2025-06-03 10:47:05,495 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 12:55:24] 2025-06-03 10:47:05,497 | INFO     | sum of deviations: 111527725387.00002
[2025-06-03 12:55:24] 2025-06-03 10:47:05,497 | INFO     | mean x: 1748940774.0
[2025-06-03 12:55:24] 2025-06-03 10:47:05,497 | INFO     | mean y: 2411383.767772512
[2025-06-03 12:55:24] 2025-06-03 10:47:05,497 | INFO     | -- intersect: -66961669563.857994
[2025-06-03 12:55:24] 2025-06-03 10:47:05,497 | INFO     | intersect: -66961669563.857994
[2025-06-03 12:55:24] 2025-06-03 10:47:05,497 | INFO     | chi2: 7.519762533030248
[2025-06-03 12:55:24] 2025-06-03 10:47:05,498 | INFO     | current chi2=7.519762533030248 (change=8.38208084247341 %)
[2025-06-03 12:55:24] 2025-06-03 10:47:05,498 | INFO     | right removable region: 210
[2025-06-03 12:55:24] 2025-06-03 10:47:05,498 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 12:55:24] 2025-06-03 10:47:05,500 | INFO     | sum of deviations: 23511068655.0
[2025-06-03 12:55:24] 2025-06-03 10:47:05,500 | INFO     | mean x: 1748941079.0
[2025-06-03 12:55:24] 2025-06-03 10:47:05,500 | INFO     | mean y: 2458132.815165877
[2025-06-03 12:55:24] 2025-06-03 10:47:05,500 | INFO     | -- intersect: -14114187514.503227
[2025-06-03 12:55:24] 2025-06-03 10:47:05,500 | INFO     | intersect: -14114187514.503227
[2025-06-03 12:55:24] 2025-06-03 10:47:05,500 | INFO     | chi2: 2.874096609426864
[2025-06-03 12:55:24] 2025-06-03 10:47:05,501 | INFO     | current chi2=2.874096609426864 (change=64.98310290294741 %)
[2025-06-03 12:55:24] 2025-06-03 10:47:05,501 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 12:55:24] 2025-06-03 10:47:05,502 | INFO     | sum of deviations: -21886538584.5
[2025-06-03 12:55:24] 2025-06-03 10:47:05,503 | INFO     | mean x: 1748941231.5
[2025-06-03 12:55:24] 2025-06-03 10:47:05,503 | INFO     | mean y: 2492212.004854369
[2025-06-03 12:55:24] 2025-06-03 10:47:05,503 | INFO     | -- intersect: 14124044801.59634
[2025-06-03 12:55:24] 2025-06-03 10:47:05,503 | INFO     | intersect: 14124044801.59634
[2025-06-03 12:55:24] 2025-06-03 10:47:05,503 | INFO     | chi2: 0.9251856629906895
[2025-06-03 12:55:24] 2025-06-03 10:47:05,503 | INFO     | current chi2=0.9251856629906895 (change=67.80951412850438 %)
[2025-06-03 12:55:24] 2025-06-03 10:47:05,504 | INFO     | sum of square deviations: 2518000700.0
[2025-06-03 12:55:24] 2025-06-03 10:47:05,505 | INFO     | sum of deviations: -23218232543.0
[2025-06-03 12:55:24] 2025-06-03 10:47:05,505 | INFO     | mean x: 1748941384.0
[2025-06-03 12:55:24] 2025-06-03 10:47:05,506 | INFO     | mean y: 2493199.4527363186
[2025-06-03 12:55:24] 2025-06-03 10:47:05,506 | INFO     | -- intersect: 16129306729.642883
[2025-06-03 12:55:24] 2025-06-03 10:47:05,506 | INFO     | intersect: 16129306729.642883
[2025-06-03 12:55:24] 2025-06-03 10:47:05,506 | INFO     | chi2: 0.889705670866014
[2025-06-03 12:55:24] 2025-06-03 10:47:05,506 | INFO     | current chi2=0.889705670866014 (change=3.8349050946147765 %)
[2025-06-03 12:55:24] 2025-06-03 10:47:05,506 | INFO     | left removable region: 30
[2025-06-03 12:55:24] 2025-06-03 10:47:05,507 | INFO     | sum of square deviations: 1808350185.0
[2025-06-03 12:55:24] 2025-06-03 10:47:05,508 | INFO     | sum of deviations: 4829468514.999999
[2025-06-03 12:55:24] 2025-06-03 10:47:05,508 | INFO     | mean x: 1748941658.5
[2025-06-03 12:55:24] 2025-06-03 10:47:05,508 | INFO     | mean y: 2491158.0555555555
[2025-06-03 12:55:24] 2025-06-03 10:47:05,508 | INFO     | -- intersect: -4668318038.282504
[2025-06-03 12:55:24] 2025-06-03 10:47:05,508 | INFO     | intersect: -4668318038.282504
[2025-06-03 12:55:24] 2025-06-03 10:47:05,509 | INFO     | chi2: 0.0009730845486239864
[2025-06-03 12:55:24] 2025-06-03 10:47:05,509 | INFO     | -- intersect: -4668318038.282504
[2025-06-03 12:55:24] 2025-06-03 10:47:05,509 | INFO     | current memory leak: 2.67 B/s (using 180 data points, chi2=0.00)
[2025-06-03 12:55:24] 2025-06-03 10:47:05,510 | INFO     | ..............................
[2025-06-03 12:55:24] 2025-06-03 10:47:05,510 | INFO     | . Timing measurements:
[2025-06-03 12:55:24] 2025-06-03 10:47:05,510 | INFO     | . get job = 0 s
[2025-06-03 12:55:24] 2025-06-03 10:47:05,510 | INFO     | . initial setup = 6 s
[2025-06-03 12:55:24] 2025-06-03 10:47:05,510 | INFO     | . payload setup = 176 s
[2025-06-03 12:55:24] 2025-06-03 10:47:05,510 | INFO     | . stage-in = 0 s
[2025-06-03 12:55:24] 2025-06-03 10:47:05,510 | INFO     | . payload execution = 13317 s
[2025-06-03 12:55:24] 2025-06-03 10:47:05,510 | INFO     | . stage-out = 3 s
[2025-06-03 12:55:24] 2025-06-03 10:47:05,510 | INFO     | . log creation = 1 s
[2025-06-03 12:55:24] 2025-06-03 10:47:05,511 | INFO     | ..............................
[2025-06-03 12:55:24] 2025-06-03 10:47:06,086 | INFO     | 
[2025-06-03 12:55:24] 2025-06-03 10:47:06,086 | INFO     | job summary report
[2025-06-03 12:55:24] 2025-06-03 10:47:06,086 | INFO     | --------------------------------------------------
[2025-06-03 12:55:24] 2025-06-03 10:47:06,086 | INFO     | PanDA job id: 6677396831
[2025-06-03 12:55:24] 2025-06-03 10:47:06,086 | INFO     | task id: 45006595
[2025-06-03 12:55:24] 2025-06-03 10:47:06,086 | INFO     | errors: (none)
[2025-06-03 12:55:24] 2025-06-03 10:47:06,086 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:55:24] 2025-06-03 10:47:06,087 | INFO     | pilot state: finished 
[2025-06-03 12:55:24] 2025-06-03 10:47:06,087 | INFO     | transexitcode: 0
[2025-06-03 12:55:24] 2025-06-03 10:47:06,087 | INFO     | exeerrorcode: 0
[2025-06-03 12:55:24] 2025-06-03 10:47:06,087 | INFO     | exeerrordiag: 
[2025-06-03 12:55:24] 2025-06-03 10:47:06,087 | INFO     | exitcode: 0
[2025-06-03 12:55:24] 2025-06-03 10:47:06,087 | INFO     | exitmsg: OK
[2025-06-03 12:55:24] 2025-06-03 10:47:06,087 | INFO     | cpuconsumptiontime: 49344 s
[2025-06-03 12:55:24] 2025-06-03 10:47:06,087 | INFO     | nevents: 400
[2025-06-03 12:55:24] 2025-06-03 10:47:06,087 | INFO     | neventsw: 0
[2025-06-03 12:55:24] 2025-06-03 10:47:06,087 | INFO     | pid: 19596
[2025-06-03 12:55:24] 2025-06-03 10:47:06,087 | INFO     | pgrp: 19596
[2025-06-03 12:55:24] 2025-06-03 10:47:06,087 | INFO     | corecount: 8
[2025-06-03 12:55:24] 2025-06-03 10:47:06,087 | INFO     | event service: False
[2025-06-03 12:55:24] 2025-06-03 10:47:06,088 | INFO     | sizes: {0: 2404354, 1: 2405039, 2: 2405067, 13: 2405238, 23: 2405294, 34: 2405322, 45: 2405478, 56: 2405506, 66: 2405534, 77: 2405562, 88: 2405618, 95: 2406132, 98
[2025-06-03 12:55:24] 2025-06-03 10:47:06,088 | INFO     | --------------------------------------------------
[2025-06-03 12:55:24] 2025-06-03 10:47:06,088 | INFO     | 
[2025-06-03 12:55:24] 2025-06-03 10:47:06,088 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-03 12:55:24] 2025-06-03 10:47:06,508 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,508 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,509 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,509 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,509 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,509 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,509 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,509 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,509 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,509 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,509 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,509 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,509 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,510 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,510 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,510 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,510 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,510 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:55:24] 2025-06-03 10:47:06,510 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,510 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:55:24] 2025-06-03 10:47:06,510 | INFO     | job 6677396831 has completed (purged errors)
[2025-06-03 12:55:24] 2025-06-03 10:47:06,511 | INFO     | overall cleanup function is called
[2025-06-03 12:55:24] 2025-06-03 10:47:07,520 | INFO     | --- collectZombieJob: --- 10, [19596]
[2025-06-03 12:55:24] 2025-06-03 10:47:07,520 | INFO     | zombie collector waiting for pid 19596
[2025-06-03 12:55:24] 2025-06-03 10:47:07,520 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:55:24] 2025-06-03 10:47:07,520 | INFO     | collected zombie processes
[2025-06-03 12:55:24] 2025-06-03 10:47:07,520 | INFO     | will attempt to kill all subprocesses of pid=19596
[2025-06-03 12:55:24] 2025-06-03 10:47:07,633 | INFO     | process IDs to be killed: [19596] (in reverse order)
[2025-06-03 12:55:24] 2025-06-03 10:47:08,481 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:55:24] 2025-06-03 10:47:08,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:55:24] 2025-06-03 10:47:08,485 | INFO     | did not find any defunct processes belonging to 19596
[2025-06-03 12:55:24] 2025-06-03 10:47:08,488 | INFO     | did not find any defunct processes belonging to 19596
[2025-06-03 12:55:24] 2025-06-03 10:47:08,488 | INFO     | ready for new job
[2025-06-03 12:55:24] 2025-06-03 10:47:08,489 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:55:24] 2025-06-03 10:47:08,491 | INFO     | **************************************
[2025-06-03 12:55:24] 2025-06-03 10:47:08,491 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:55:24] 2025-06-03 10:47:08,491 | INFO     | **************************************
[2025-06-03 12:55:24] 2025-06-03 10:47:08,491 | INFO     | 
[2025-06-03 12:55:24] 2025-06-03 10:47:08,492 | INFO     | pilot is running in a VM
[2025-06-03 12:55:24] 2025-06-03 10:47:08,492 | INFO     | architecture information:
[2025-06-03 12:55:24] 2025-06-03 10:47:08,508 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:55:24] 2025-06-03 10:47:08,745 | INFO     | cat /etc/os-release:
[2025-06-03 12:55:24] NAME="CentOS Linux"
[2025-06-03 12:55:24] VERSION="7 (Core)"
[2025-06-03 12:55:24] ID="centos"
[2025-06-03 12:55:24] ID_LIKE="rhel fedora"
[2025-06-03 12:55:24] VERSION_ID="7"
[2025-06-03 12:55:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:55:24] ANSI_COLOR="0;31"
[2025-06-03 12:55:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:55:24] HOME_URL="https://www.centos.org/"
[2025-06-03 12:55:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:55:24] 
[2025-06-03 12:55:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:55:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:55:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:55:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:55:24] 
[2025-06-03 12:55:24] 2025-06-03 10:47:08,745 | INFO     | **************************************
[2025-06-03 12:55:24] 2025-06-03 10:47:09,249 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-03 12:55:24] 2025-06-03 10:47:09,431 | INFO     | sufficient remaining disk space (496465084416 B)
[2025-06-03 12:55:24] 2025-06-03 10:47:09,431 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:55:24] 2025-06-03 10:47:09,431 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:55:24] 2025-06-03 10:47:09,431 | INFO     | update_server=False
[2025-06-03 12:55:24] 2025-06-03 10:47:09,431 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:55:24] 2025-06-03 10:47:09,433 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:55:24] 2025-06-03 10:47:09,433 | INFO     | aborting loop
[2025-06-03 12:55:24] 2025-06-03 10:47:09,433 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 12:55:24] 2025-06-03 10:47:09,433 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:55:24] 2025-06-03 10:47:09,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:55:24] 2025-06-03 10:47:09,434 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:55:24] 2025-06-03 10:47:09,825 | INFO     | all payload control threads have been joined
[2025-06-03 12:55:24] 2025-06-03 10:47:10,226 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:55:24] 2025-06-03 10:47:10,287 | INFO     | all job control threads have been joined
[2025-06-03 12:55:24] 2025-06-03 10:47:10,346 | INFO     | all data control threads have been joined
[2025-06-03 12:55:24] 2025-06-03 10:47:10,438 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:55:24] 2025-06-03 10:47:10,439 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:55:24] 2025-06-03 10:47:10,522 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:55:24] 2025-06-03 10:47:10,655 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:55:24] 2025-06-03 10:47:10,831 | INFO     | [payload] control thread has finished
[2025-06-03 12:55:24] 2025-06-03 10:47:11,294 | INFO     | [job] control thread has finished
[2025-06-03 12:55:24] 2025-06-03 10:47:11,352 | INFO     | [data] control thread has finished
[2025-06-03 12:55:24] 2025-06-03 10:47:11,382 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:55:24] 2025-06-03 10:47:11,506 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:55:24] 2025-06-03 10:47:11,532 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:55:24] 2025-06-03 10:47:11,559 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:55:24] 2025-06-03 10:47:11,635 | INFO     | [job] validate thread has finished
[2025-06-03 12:55:24] 2025-06-03 10:47:11,661 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:55:24] 2025-06-03 10:47:11,724 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:55:24] 2025-06-03 10:47:11,856 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:55:24] 2025-06-03 10:47:12,233 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:55:24] 2025-06-03 10:47:12,299 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:55:24] 2025-06-03 10:47:16,308 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:55:24] 2025-06-03 10:47:18,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139651090925376)>', '<ExcThread(monitor, started 139650509297408)>']
[2025-06-03 12:55:24] 2025-06-03 10:47:18,484 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:55:24] 2025-06-03 10:47:18,485 | INFO     | [monitor] control thread has ended
[2025-06-03 12:55:24] 2025-06-03 10:47:23,310 | INFO     | all workflow threads have been joined
[2025-06-03 12:55:24] 2025-06-03 10:47:23,310 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:55:24] 2025-06-03 10:47:23,310 | INFO     | traces error code: 0
[2025-06-03 12:55:24] 2025-06-03 10:47:23,310 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:55:24] 2025-06-03 10:47:23,720 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:55:24] 2025-06-03 10:47:23,821 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:55:24] 2025-06-03 10:47:23,923 [wrapper] pilotpid: 7008
[2025-06-03 12:55:24] 2025-06-03 10:47:24,034 [wrapper] Pilot exit status: 0
[2025-06-03 12:55:24] 2025-06-03 10:47:24,573 [wrapper] pandaids: 6677396831
[2025-06-03 12:55:24] 2025-06-03 10:47:25,349 [wrapper] cleanup supervisor_pilot 28744 7009
[2025-06-03 12:55:24] 2025-06-03 10:47:25,428 [wrapper] Test setup, not cleaning
[2025-06-03 12:55:24] 2025-06-03 10:47:25,473 [wrapper] apfmon messages muted
[2025-06-03 12:55:24] 2025-06-03 10:47:25,543 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:55:24] 2025-06-03 10:47:25,601 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:55:24]  *** Error codes and diagnostics ***
[2025-06-03 12:55:24]     "exeErrorCode": 0,
[2025-06-03 12:55:24]     "exeErrorDiag": "",
[2025-06-03 12:55:24]     "pilotErrorCode": 0,
[2025-06-03 12:55:24]     "pilotErrorDiag": "",
[2025-06-03 12:55:24]  *** Listing of results directory ***
[2025-06-03 12:55:24] total 393256
[2025-06-03 12:55:24] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:34 pilot3.tar.gz
[2025-06-03 12:55:24] -rwx------. 1 boinc boinc     37140 Jun  2 21:49 runpilot2-wrapper.sh
[2025-06-03 12:55:24] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:49 queuedata.json
[2025-06-03 12:55:24] -rw-r--r--. 1 boinc boinc       100 Jun  3 08:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:55:24] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 08:53 run_atlas
[2025-06-03 12:55:24] -rw-r--r--. 1 boinc boinc       105 Jun  3 08:53 job.xml
[2025-06-03 12:55:24] -rw-r--r--. 2 boinc boinc 217954370 Jun  3 08:53 EVNT.45006593._000404.pool.root.1
[2025-06-03 12:55:24] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:53 start_atlas.sh
[2025-06-03 12:55:24] drwxrwx--x. 2 boinc boinc        68 Jun  3 08:53 shared
[2025-06-03 12:55:24] -rw-r--r--. 2 boinc boinc    508873 Jun  3 08:53 input.tar.gz
[2025-06-03 12:55:24] -rw-r--r--. 1 boinc boinc      6391 Jun  3 08:53 init_data.xml
[2025-06-03 12:55:24] -rw-r--r--. 1 boinc boinc         0 Jun  3 08:53 boinc_lockfile
[2025-06-03 12:55:24] -rw-r--r--. 1 boinc boinc      2524 Jun  3 08:54 pandaJob.out
[2025-06-03 12:55:24] -rw-------. 1 boinc boinc    986901 Jun  3 08:57 agis_schedconf.cvmfs.json
[2025-06-03 12:55:24] drwx------. 4 boinc boinc      4096 Jun  3 08:57 pilot3
[2025-06-03 12:55:24] -rw-------. 1 boinc boinc 177776610 Jun  3 12:44 HITS.45006595._010096.pool.root.1
[2025-06-03 12:55:24] -rw-r--r--. 1 boinc boinc       531 Jun  3 12:44 boinc_task_state.xml
[2025-06-03 12:55:24] -rw-------. 1 boinc boinc      1017 Jun  3 12:45 memory_monitor_summary.json
[2025-06-03 12:55:24] -rw-------. 1 boinc boinc   1603667 Jun  3 12:45 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:55:24] -rw-------. 1 boinc boinc    390443 Jun  3 12:45 log.45006595._010096.job.log.tgz.1
[2025-06-03 12:55:24] -rw-------. 1 boinc boinc        95 Jun  3 12:46 pilot_heartbeat.json
[2025-06-03 12:55:24] -rw-------. 1 boinc boinc      7688 Jun  3 12:47 heartbeat.json
[2025-06-03 12:55:24] -rw-------. 1 boinc boinc      4539 Jun  3 12:47 pilotlog.txt
[2025-06-03 12:55:24] -rw-------. 1 boinc boinc   1181657 Jun  3 12:47 log.45006595._010096.job.log.1
[2025-06-03 12:55:24] -rw-------. 1 boinc boinc       357 Jun  3 12:47 output.list
[2025-06-03 12:55:24] -rw-r--r--. 1 boinc boinc       620 Jun  3 12:47 runtime_log
[2025-06-03 12:55:24] -rw-------. 1 boinc boinc   1587200 Jun  3 12:47 result.tar.gz
[2025-06-03 12:55:24] -rw-r--r--. 1 boinc boinc      8659 Jun  3 12:47 runtime_log.err
[2025-06-03 12:55:24] -rw-------. 1 boinc boinc       656 Jun  3 12:47 cOXLDmALQg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9PgKDmyCAqrn.diag
[2025-06-03 12:55:24] -rw-r--r--. 1 boinc boinc      8192 Jun  3 12:55 boinc_mmap_file
[2025-06-03 12:55:24] -rw-r--r--. 1 boinc boinc        28 Jun  3 12:55 wrapper_checkpoint.txt
[2025-06-03 12:55:24] -rw-r--r--. 1 boinc boinc     20501 Jun  3 12:55 stderr.txt
[2025-06-03 12:55:24] HITS file was successfully produced:
[2025-06-03 12:55:24] -rw-------. 1 boinc boinc 177776610 Jun  3 12:44 shared/HITS.pool.root.1
[2025-06-03 12:55:24]  *** Contents of shared directory: ***
[2025-06-03 12:55:24] total 388528
[2025-06-03 12:55:24] -rw-r--r--. 2 boinc boinc 217954370 Jun  3 08:53 ATLAS.root_0
[2025-06-03 12:55:24] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:53 start_atlas.sh
[2025-06-03 12:55:24] -rw-r--r--. 2 boinc boinc    508873 Jun  3 08:53 input.tar.gz
[2025-06-03 12:55:24] -rw-------. 1 boinc boinc 177776610 Jun  3 12:44 HITS.pool.root.1
[2025-06-03 12:55:24] -rw-------. 1 boinc boinc   1587200 Jun  3 12:47 result.tar.gz
12:55:26 (833): run_atlas exited; CPU time 49539.902341
12:55:26 (833): called boinc_finish(0)

</stderr_txt>
]]>

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